F357772
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 245 | 188 | 490 | 809 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2513237096|2513660664 |
| Length | 885 |
| Sequence | PPARGVAVEAFWRQPTNSLMEALNTQWRGLPQQEAERRLAQVGPNLAEPSQTRSILQKVVHRLVNPLIAILIVAATVSGISGDLGSFAIIVLVVGLSLTLDIVQEHRAEVAADALRRSVAIQADVIRDGAIVALPVSAVVPGDVVELRTGDLVPADGVALAARDLQLNEALMTGEPFPAAKTTEPCATNLPAEASNALFAGTSVVGGSGVMLVVETGRRTRFGMITAALLANDPPSALEQGLQKLGMLILRLTLFLTLFVLLAHLVAHRPAMESFLFAVALAVGLTPELLPMVMTVTLARGAQRMAKRQVIVKRLSAIHDLGAMDTLCVDKTGTLTEAKITLAAHLDPAGCSSERVLELARLNSAFQTGIHSPLDEALLAVEAPEKCSAWTRLSEIPFDFERRCLSILVARGNDRFLIVKGAPEAIMDRAVAVEVDGMARPLDDDRRAELVRLQDDHARQGFRLLAVAVRTMAPDQTDVTTGDERLLTLVGFCAFADPPKPDAARAVEELKARGVGIKVLSGDHAAVVAHVANAVGLPSRRVLTGGQIADLSDRALAAQIEGVDLFARIDPEQKRRIIRASRQRGHIVGFMGDGVNDAPAIHAAHVGISVAGATEVARAAADMILLAPNLSALGAGVIEGRRTFANILKYVRMGTSSNFGNMLSMALASIALPLLPLQILLNNLLYDLSEIGIPFDEIDEEDAERPQWWNMADILRFTVVMGTISSLFDVATFTILLKVFRTDTSSFQTGWFLESIATQILVIFLIRSQRRPWRASRPNRVLVAGSLGALAAAIFLALGPAHASWHDRSDHARLPRRRRSRKAPCATCQQPAQATRRRVSTATSCRRYRPEGLRTSLARRRRDELAARDATVDPYQGRSFLGMRS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300000041 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300000043 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere | Metagenome | Rhizosphere |
| 3 | 3300000044 | Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old | Metagenome | Rhizosphere |
| 4 | 3300001904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 | Metagenome | Rhizosphere |
| 5 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 6 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 7 | 3300002076 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 | Metagenome | Rhizosphere |
| 8 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 9 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 10 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 11 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 12 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 13 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 14 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 15 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 16 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 17 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 18 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 19 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 21 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 26 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 29 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 30 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 31 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 32 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 33 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 34 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 56 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 80 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 82 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 83 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 84 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 85 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 86 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 87 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 88 | 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Metagenome | Rhizosphere |
| 89 | 3300035092 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 | Metagenome | Rhizosphere |
| 90 | 3300035112 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 | Metagenome | Rhizosphere |
| 91 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 92 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 93 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 94 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 95 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 96 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 97 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 98 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 99 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 100 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 101 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 111 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 112 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 113 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 114 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 115 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 116 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 117 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 118 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 119 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 120 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 121 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 122 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 123 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 142 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 144 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 145 | 3300053102 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere | Metagenome | Endosphere |
| 146 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 147 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 148 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 149 | 3300053150 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere | Metagenome | Endosphere |
| 150 | 3300053162 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere | Metagenome | Endosphere |
| 151 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 152 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 154 | 2513237096 | Bradyrhizobium pachyrhizi USDA 3259 | Isolate | Nodule |
| 155 | 2508501114 | Microvirga lotononidis WSM3557 | Isolate | Nodule |
| 156 | 2513237087 | Azorhizobium doebereinerae UFLA1-100 | Isolate | Nodule |
| 157 | 2513237102 | Bradyrhizobium japonicum USDA 135 | Isolate | Nodule |
| 158 | 2513237137 | Bradyrhizobium elkanii USDA 94 | Isolate | Nodule |
| 159 | 2513237145 | Bradyrhizobium elkanii USDA 3254 | Isolate | Nodule |
| 160 | 2517572143 | Bradyrhizobium elkanii USDA 76 | Isolate | Nodule |
| 161 | 2519103095 | Burkholderia sp. KJ006 | Isolate | Nodule |
| 162 | 2524023210 | Bradyrhizobium sp. Ai1a-2 | Isolate | Nodule |
| 163 | 2528768022 | Bradyrhizobium japonicum USDA 123 | Isolate | Nodule |
| 164 | 2582581311 | Burkholderia sp. WP42 | Isolate | Rhizosphere |
| 165 | 2643221545 | Caulobacter sp. Root1455 | Isolate | Unclassified |
| 166 | 2643221691 | Caulobacter sp. Root487D2Y | Isolate | Unclassified |
| 167 | 2751185897 | Sphingomonas panacis DCY99 | Isolate | Unclassified |
| 168 | 2791355196 | Bradyrhizobium sp. Y36 | Isolate | Nodule |
| 169 | 2791355197 | Bradyrhizobium sp. C9 | Isolate | Nodule |
| 170 | 2828305725 | Xanthobacter tagetidis DSM 11105 | Isolate | Unclassified |
| 171 | 2842038055 | Bradyrhizobium centrosematis SEMIA 424 | Isolate | Nodule |
| 172 | 2842045827 | Bradyrhizobium centrosematis SEMIA 431 | Isolate | Nodule |
| 173 | 2874620515 | Bradyrhizobium nanningense CCBAU 53390 | Isolate | Unclassified |
| 174 | 2881364244 | Bradyrhizobium sp. RP6 | Isolate | Unclassified |
| 175 | 2884960567 | Caulobacter sp. 602-1 | Isolate | Rhizosphere |
| 176 | 2894772417 | Roseomonas oryzicola KCTC 22478 | Isolate | Rhizosphere |
| 177 | 2904666416 | Bradyrhizobium nanningense CCBAU 51757 | Isolate | Unclassified |
| 178 | 2906610324 | |||
| 179 | 2908739725 | Bradyrhizobium sp. UFLA03-84 | Isolate | Nodule |
| 180 | 2922425934 | |||
| 181 | 2928531327 | Caulobacter sp. 1776 | Isolate | Rhizosphere |
| 182 | 2935694250 | Bradyrhizobium sp. LA6.1 | Isolate | Nodule |
| 183 | 3005474847 | Bradyrhizobium sp. CCBAU 53421 | Isolate | Nodule |
| 184 | 8016622563 | Bradyrhizobium sp. LB13.1 | Isolate | Nodule |
| 185 | 8019538911 | Bradyrhizobium sp. LB9.1b | Isolate | Nodule |
| 186 | 8019547302 | Bradyrhizobium sp. LB1.3 | Isolate | Nodule |
| 187 | 8019555841 | Bradyrhizobium sp. JR6.1 | Isolate | Nodule |
| 188 | 8040167225 | Burkholderia vietnamiensis RS1 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.01 |
| Metatranscriptomes | 0 |
| Isolates | 13.99 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 13.06 |
| Nodule | 8.98 |
| Rhizoplane | 2.04 |
| Rhizosphere | 64.9 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | ARcpr5oldR_c000173 | 3300000041 | Bacteria | 11157 |
| 2 | ARcpr5yngRDRAFT_c000025 | 3300000043 | Bacteria | 24651 |
| 3 | ARSoilOldRDRAFT_c000127 | 3300000044 | Bacteria | 13632 |
| 4 | JGI24736J21556_1000003 | 3300001904 | Bacteria | 60801 |
| 5 | JGI24737J22298_10002816 | 3300001990 | Bacteria | 6158 |
| 6 | JGI24735J21928_10004261 | 3300002067 | Bacteria | 4825 |
| 7 | JGI24749J21850_1000435 | 3300002076 | Bacteria | 6202 |
| 8 | JGI25165J46597_1003373 | 3300003214 | Bacteria | 4034 |
| 9 | JGI25153J46596_10000194 | 3300003215 | Bacteria | 58106 |
| 10 | JGI25153J46596_10000910 | 3300003215 | Bacteria | 17982 |
| 11 | rootH1_10010374 | 3300003323 | Bacteria | 8691 |
| 12 | Ga0055532_1000193 | 3300003758 | Bacteria | 50751 |
| 13 | Ga0055527_1000348 | 3300003760 | Bacteria | 22982 |
| 14 | Ga0055535_1000137 | 3300003761 | Bacteria | 76845 |
| 15 | Ga0055542_1002926 | 3300003762 | Bacteria | 5026 |
| 16 | Ga0055529_1001429 | 3300003763 | Bacteria | 7502 |
| 17 | Ga0065165_1004425 | 3300005262 | Bacteria | 8744 |
| 18 | Ga0065704_10074835 | 3300005289 | Bacteria | 5974 |
| 19 | Ga0065715_10024003 | 3300005293 | Bacteria | 3537 |
| 20 | Ga0070660_100001810 | 3300005339 | Bacteria | 14660 |
| 21 | Ga0070660_100003172 | 3300005339 | Bacteria | 11294 |
| 22 | Ga0070660_100011689 | 3300005339 | Bacteria | 6250 |
| 23 | Ga0070689_100021033 | 3300005340 | Bacteria | 4850 |
| 24 | Ga0070661_100015083 | 3300005344 | Bacteria | 5452 |
| 25 | Ga0070671_100000715 | 3300005355 | Bacteria | 23894 |
| 26 | Ga0070667_100000961 | 3300005367 | Bacteria | 26527 |
| 27 | Ga0070679_100030625 | 3300005530 | Bacteria | 5313 |
| 28 | Ga0070679_100035853 | 3300005530 | Bacteria | 4921 |
| 29 | Ga0070679_100042963 | 3300005530 | Bacteria | 4502 |
| 30 | Ga0070679_100059200 | 3300005530 | Bacteria | 3818 |
| 31 | Ga0070684_100041050 | 3300005535 | Bacteria | 3987 |
| 32 | Ga0068853_100012260 | 3300005539 | Bacteria | 6970 |
| 33 | Ga0068855_100011516 | 3300005563 | Bacteria | 10688 |
| 34 | Ga0068855_100045970 | 3300005563 | Bacteria | 5161 |
| 35 | Ga0068855_100077163 | 3300005563 | Bacteria | 3865 |
| 36 | Ga0068857_100005203 | 3300005577 | Bacteria | 11072 |
| 37 | Ga0068856_100122731 | 3300005614 | Bacteria | 2600 |
| 38 | Ga0068851_10010617 | 3300005834 | Bacteria | 4301 |
| 39 | Ga0068862_100000220 | 3300005844 | Bacteria | 63070 |
| 40 | Ga0075364_10007301 | 3300006051 | Bacteria | 6558 |
| 41 | Ga0075434_100034506 | 3300006871 | Bacteria | 4995 |
| 42 | Ga0105240_10004174 | 3300009093 | Bacteria | 22149 |
| 43 | Ga0105240_10043225 | 3300009093 | Bacteria | 5735 |
| 44 | Ga0105240_10068341 | 3300009093 | Bacteria | 4401 |
| 45 | Ga0111539_10001827 | 3300009094 | Bacteria | 28327 |
| 46 | Ga0111539_10125085 | 3300009094 | Bacteria | 3013 |
| 47 | Ga0105241_10015334 | 3300009174 | Bacteria | 5612 |
| 48 | Ga0105237_10028792 | 3300009545 | Bacteria | 5653 |
| 49 | Ga0105237_10110318 | 3300009545 | Bacteria | 2743 |
| 50 | Ga0105238_10012699 | 3300009551 | Bacteria | 8500 |
| 51 | Ga0105249_10021112 | 3300009553 | Bacteria | 5829 |
| 52 | Ga0105239_10012104 | 3300010375 | Bacteria | 9620 |
| 53 | Ga0105239_10016305 | 3300010375 | Bacteria | 8215 |
| 54 | Ga0157370_10080366 | 3300013104 | Bacteria | 3069 |
| 55 | Ga0157369_10006895 | 3300013105 | Bacteria | 13108 |
| 56 | Ga0157369_10007433 | 3300013105 | Bacteria | 12620 |
| 57 | Ga0157369_10008441 | 3300013105 | Bacteria | 11816 |
| 58 | Ga0157378_10001958 | 3300013297 | Bacteria | 18458 |
| 59 | Ga0163162_10001637 | 3300013306 | Bacteria | 20980 |
| 60 | Ga0157375_10048464 | 3300013308 | Bacteria | 4156 |
| 61 | Ga0157375_10058179 | 3300013308 | Bacteria | 3824 |
| 62 | Ga0157380_10003911 | 3300014326 | Bacteria | 10274 |
| 63 | Ga0209672_100015 | 3300025228 | Bacteria | 529352 |
| 64 | Ga0209147_100016 | 3300025229 | Bacteria | 527606 |
| 65 | Ga0209258_100026 | 3300025242 | Bacteria | 527606 |
| 66 | Ga0209677_100529 | 3300025253 | Bacteria | 21261 |
| 67 | Ga0209148_1000952 | 3300025254 | Bacteria | 18941 |
| 68 | Ga0209233_1000441 | 3300025261 | Bacteria | 28814 |
| 69 | Ga0209455_1000321 | 3300025272 | Bacteria | 47677 |
| 70 | Ga0209758_1000026 | 3300025297 | Bacteria | 582706 |
| 71 | Ga0209758_1000097 | 3300025297 | Bacteria | 230529 |
| 72 | Ga0209758_1001118 | 3300025297 | Bacteria | 34558 |
| 73 | Ga0209256_1000838 | 3300025299 | Bacteria | 38642 |
| 74 | Ga0209257_1000201 | 3300025304 | Bacteria | 147272 |
| 75 | Ga0207656_10003190 | 3300025321 | Bacteria | 5607 |
| 76 | Ga0207647_10030525 | 3300025904 | Bacteria | 3475 |
| 77 | Ga0207705_10003075 | 3300025909 | Bacteria | 12721 |
| 78 | Ga0207705_10061832 | 3300025909 | Bacteria | 2705 |
| 79 | Ga0207654_10002929 | 3300025911 | Bacteria | 8655 |
| 80 | Ga0207707_10019000 | 3300025912 | Bacteria | 5994 |
| 81 | Ga0207695_10028037 | 3300025913 | Bacteria | 6255 |
| 82 | Ga0207695_10035211 | 3300025913 | Bacteria | 5433 |
| 83 | Ga0207695_10047307 | 3300025913 | Bacteria | 4553 |
| 84 | Ga0207695_10058418 | 3300025913 | Bacteria | 4004 |
| 85 | Ga0207671_10004138 | 3300025914 | Bacteria | 14030 |
| 86 | Ga0207660_10020902 | 3300025917 | Bacteria | 4397 |
| 87 | Ga0207660_10026530 | 3300025917 | Bacteria | 3946 |
| 88 | Ga0207660_10027305 | 3300025917 | Bacteria | 3893 |
| 89 | Ga0207657_10000529 | 3300025919 | Bacteria | 40517 |
| 90 | Ga0207657_10004280 | 3300025919 | Bacteria | 15126 |
| 91 | Ga0207657_10010531 | 3300025919 | Bacteria | 9220 |
| 92 | Ga0207652_10008518 | 3300025921 | Bacteria | 8253 |
| 93 | Ga0207652_10044249 | 3300025921 | Bacteria | 3793 |
| 94 | Ga0207681_10013326 | 3300025923 | Bacteria | 5086 |
| 95 | Ga0207694_10003885 | 3300025924 | Bacteria | 11814 |
| 96 | Ga0207644_10000538 | 3300025931 | Bacteria | 24606 |
| 97 | Ga0207706_10008432 | 3300025933 | Bacteria | 9511 |
| 98 | Ga0207706_10042149 | 3300025933 | Bacteria | 4045 |
| 99 | Ga0207711_10048000 | 3300025941 | Bacteria | 3652 |
| 100 | Ga0207667_10023895 | 3300025949 | Bacteria | 6724 |
| 101 | Ga0207667_10024500 | 3300025949 | Bacteria | 6624 |
| 102 | Ga0207667_10032794 | 3300025949 | Bacteria | 5591 |
| 103 | Ga0207658_10001287 | 3300025986 | Bacteria | 19846 |
| 104 | Ga0207702_10024194 | 3300026078 | Bacteria | 5039 |
| 105 | Ga0207648_10052717 | 3300026089 | Bacteria | 3557 |
| 106 | Ga0207648_10067296 | 3300026089 | Bacteria | 3123 |
| 107 | Ga0207674_10017205 | 3300026116 | Bacteria | 7888 |
| 108 | Ga0207674_10018459 | 3300026116 | Bacteria | 7580 |
| 109 | Ga0207674_10029069 | 3300026116 | Bacteria | 5826 |
| 110 | Ga0207675_100036713 | 3300026118 | Bacteria | 4570 |
| 111 | Ga0207698_10008960 | 3300026142 | Bacteria | 6349 |
| 112 | Ga0207428_10061423 | 3300027907 | Bacteria | 2975 |
| 113 | Ga0268265_10000096 | 3300028380 | Bacteria | 111507 |
| 114 | Ga0265338_10012054 | 3300028800 | Bacteria | 9887 |
| 115 | Ga0265338_10019802 | 3300028800 | Bacteria | 7112 |
| 116 | Ga0265325_10018160 | 3300031241 | Bacteria | 3900 |
| 117 | Ga0265339_10004360 | 3300031249 | Bacteria | 9658 |
| 118 | Ga0265331_10000003 | 3300031250 | Bacteria | 499358 |
| 119 | Ga0265331_10004966 | 3300031250 | Bacteria | 8170 |
| 120 | Ga0265327_10000384 | 3300031251 | Bacteria | 83284 |
| 121 | Ga0265342_10000546 | 3300031712 | Bacteria | 39732 |
| 122 | Ga0307516_10004048 | 3300031730 | Bacteria | 18366 |
| 123 | Ga0373958_0001978 | 3300034819 | Bacteria | 2820 |
| 124 | Ga0373952_0001599 | 3300035092 | Bacteria | 4126 |
| 125 | Ga0373932_0002779 | 3300035112 | Bacteria | 4344 |
| 126 | Ga0373960_0003288 | 3300035121 | Bacteria | 3656 |
| 127 | Ga0373942_0001066 | 3300035207 | Bacteria | 7369 |
| 128 | Ga0373931_0025604 | 3300035691 | Bacteria | 2996 |
| 129 | Ga0395900_0076418 | 3300037418 | Bacteria | 3442 |
| 130 | Ga0466969_0001810 | 3300044656 | Bacteria | 11407 |
| 131 | Ga0466966_0002491 | 3300044684 | Bacteria | 12062 |
| 132 | Ga0466961_0000070 | 3300044693 | Bacteria | 62574 |
| 133 | Ga0453684_0003179 | 3300044712 | Bacteria | 37677 |
| 134 | Ga0466959_0003090 | 3300045049 | Bacteria | 10787 |
| 135 | Ga0466967_0002969 | 3300045976 | Bacteria | 10846 |
| 136 | Ga0495603_0012934 | 3300046455 | Bacteria | 5047 |
| 137 | Ga0495638_0000016 | 3300046460 | Bacteria | 396505 |
| 138 | Ga0495583_0000290 | 3300046506 | Bacteria | 79731 |
| 139 | Ga0495643_0000073 | 3300046522 | Bacteria | 168344 |
| 140 | Ga0495648_0000013 | 3300046524 | Bacteria | 289090 |
| 141 | Ga0495658_0003071 | 3300046683 | Bacteria | 8352 |
| 142 | Ga0495671_0000018 | 3300046692 | Bacteria | 291470 |
| 143 | Ga0495581_0032508 | 3300047315 | Bacteria | 3021 |
| 144 | Ga0495673_0000130 | 3300047469 | Bacteria | 138192 |
| 145 | Ga0496102_0000513 | 3300048905 | Bacteria | 42281 |
| 146 | Ga0496102_0015853 | 3300048905 | Bacteria | 6571 |
| 147 | Ga0496103_0000345 | 3300048906 | Bacteria | 42238 |
| 148 | Ga0496103_0001554 | 3300048906 | Bacteria | 15232 |
| 149 | Ga0496112_0000382 | 3300048915 | Bacteria | 29045 |
| 150 | Ga0496116_0002635 | 3300048919 | Bacteria | 18620 |
| 151 | Ga0496117_0001043 | 3300048920 | Bacteria | 42281 |
| 152 | Ga0496117_0009054 | 3300048920 | Bacteria | 9358 |
| 153 | Ga0496118_0001091 | 3300048921 | Bacteria | 42281 |
| 154 | Ga0496118_0027198 | 3300048921 | Bacteria | 4847 |
| 155 | Ga0496121_0000720 | 3300048924 | Bacteria | 61224 |
| 156 | Ga0496121_0001983 | 3300048924 | Bacteria | 32519 |
| 157 | Ga0496122_0000960 | 3300048925 | Bacteria | 52000 |
| 158 | Ga0496122_0001031 | 3300048925 | Bacteria | 48975 |
| 159 | Ga0496123_0005552 | 3300048926 | Bacteria | 12641 |
| 160 | Ga0496124_0001115 | 3300048927 | Bacteria | 42281 |
| 161 | Ga0496125_0000515 | 3300048928 | Bacteria | 67237 |
| 162 | Ga0496125_0000744 | 3300048928 | Bacteria | 53740 |
| 163 | Ga0496126_0009206 | 3300048929 | Bacteria | 10534 |
| 164 | Ga0496126_0044774 | 3300048929 | Bacteria | 4072 |
| 165 | Ga0501031_0021897 | 3300049568 | Bacteria | 4164 |
| 166 | Ga0501032_0004998 | 3300049569 | Bacteria | 9917 |
| 167 | Ga0501032_0008540 | 3300049569 | Bacteria | 7470 |
| 168 | Ga0501033_0028916 | 3300049570 | Bacteria | 4164 |
| 169 | Ga0501034_0000108 | 3300049571 | Bacteria | 152258 |
| 170 | Ga0501034_0000561 | 3300049571 | Bacteria | 58872 |
| 171 | Ga0501036_0049654 | 3300049572 | Bacteria | 3552 |
| 172 | Ga0501037_0000713 | 3300049573 | Bacteria | 25222 |
| 173 | Ga0501039_0000811 | 3300049575 | Bacteria | 22548 |
| 174 | Ga0501039_0004020 | 3300049575 | Bacteria | 11049 |
| 175 | Ga0501047_0019475 | 3300049581 | Bacteria | 6509 |
| 176 | Ga0501048_0000625 | 3300049582 | Bacteria | 25248 |
| 177 | Ga0501067_0002646 | 3300049583 | Bacteria | 9918 |
| 178 | Ga0501067_0006295 | 3300049583 | Bacteria | 6582 |
| 179 | Ga0501067_0008595 | 3300049583 | Bacteria | 5660 |
| 180 | Ga0501068_0011795 | 3300049584 | Bacteria | 4941 |
| 181 | Ga0501070_0005913 | 3300049586 | Bacteria | 10433 |
| 182 | Ga0501070_0011641 | 3300049586 | Bacteria | 7428 |
| 183 | Ga0501072_0036346 | 3300049588 | Bacteria | 3861 |
| 184 | Ga0501074_0045515 | 3300049590 | Bacteria | 3174 |
| 185 | Ga0501077_0036171 | 3300049593 | Bacteria | 3145 |
| 186 | Ga0501080_0000159 | 3300049742 | Bacteria | 48535 |
| 187 | Ga0501080_0029926 | 3300049742 | Bacteria | 5069 |
| 188 | Ga0501083_0005934 | 3300049744 | Bacteria | 8647 |
| 189 | Ga0501035_0001338 | 3300049822 | Bacteria | 25406 |
| 190 | Ga0501035_0001446 | 3300049822 | Bacteria | 24334 |
| 191 | Ga0501044_0055532 | 3300049823 | Bacteria | 4067 |
| 192 | Ga0501045_0007098 | 3300049824 | Bacteria | 7766 |
| 193 | Ga0501045_0009149 | 3300049824 | Bacteria | 6920 |
| 194 | Ga0501045_0041314 | 3300049824 | Bacteria | 3356 |
| 195 | nmdc:mga08y16_31784_c1 | 3300050511 | Bacteria | 5551 |
| 196 | nmdc:mga08y16_33100_c1 | 3300050511 | Bacteria | 5430 |
| 197 | nmdc:mga0n895_57099_c1 | 3300050512 | Bacteria | 3847 |
| 198 | Ga0500643_000838 | 3300053087 | Bacteria | 19724 |
| 199 | Ga0500554_001787 | 3300053102 | Bacteria | 4148 |
| 200 | Ga0500554_006682 | 3300053102 | Bacteria | 2605 |
| 201 | Ga0500595_000181 | 3300053119 | Bacteria | 42687 |
| 202 | Ga0500608_000476 | 3300053122 | Bacteria | 14987 |
| 203 | Ga0500559_0000015 | 3300053136 | Bacteria | 158494 |
| 204 | Ga0500603_000221 | 3300053150 | Bacteria | 15009 |
| 205 | Ga0500638_000710 | 3300053162 | Bacteria | 8914 |
| 206 | Ga0500637_0000116 | 3300053178 | Bacteria | 29193 |
| 207 | Ga0500637_0000864 | 3300053178 | Bacteria | 12159 |
| 208 | Ga0501084_0023723 | 3300054114 | Bacteria | 5116 |
| 209 | Ga0501082_0026390 | 3300060353 | Bacteria | 5005 |
| 210 | 2513660664 | 2513237096 | Bacteria | 8722461 |
| 211 | 2509080232 | 2508501114 | Bacteria | 7082538 |
| 212 | 2513591001 | 2513237087 | Bacteria | 5817514 |
| 213 | 2513700697 | 2513237102 | Bacteria | 7703324 |
| 214 | 2513858313 | 2513237137 | Bacteria | 9558895 |
| 215 | 2513922457 | 2513237145 | Bacteria | 8979722 |
| 216 | 2517887330 | 2517572143 | Bacteria | 9484767 |
| 217 | 2517887499 | 2517572143 | Bacteria | 9484767 |
| 218 | 2519462176 | 2519103095 | Bacteria | 6629912 |
| 219 | 2524464644 | 2524023210 | Bacteria | 9029266 |
| 220 | 2528857297 | 2528768022 | Bacteria | 10457665 |
| 221 | 2585295715 | 2582581311 | Bacteria | 6763856 |
| 222 | 2643750588 | 2643221545 | Bacteria | 5083237 |
| 223 | 2644509662 | 2643221691 | Bacteria | 5093099 |
| 224 | 2753763208 | 2751185897 | Bacteria | 5322941 |
| 225 | 2793062805 | 2791355196 | Bacteria | 7323613 |
| 226 | 2793069477 | 2791355197 | Bacteria | 8420563 |
| 227 | 2828309578 | 2828305725 | Bacteria | 4916900 |
| 228 | 2842043054 | 2842038055 | Bacteria | 8002051 |
| 229 | 2842051095 | 2842045827 | Bacteria | 8006841 |
| 230 | 2874622142 | 2874620515 | Bacteria | 8290088 |
| 231 | 2881370160 | 2881364244 | Bacteria | 7710352 |
| 232 | 2884964264 | 2884960567 | Bacteria | 5437054 |
| 233 | 2894777333 | 2894772417 | Bacteria | 5305674 |
| 234 | 2904673228 | 2904666416 | Bacteria | 8226587 |
| 235 | 2906613371 | |||
| 236 | 2908745824 | 2908739725 | Bacteria | 8628932 |
| 237 | 2922432324 | |||
| 238 | 2928533741 | 2928531327 | Bacteria | 5101314 |
| 239 | 2935702735 | 2935694250 | Bacteria | 9291695 |
| 240 | 3005478984 | 3005474847 | Bacteria | 9259049 |
| 241 | 8016630755 | 8016622563 | Bacteria | 7999408 |
| 242 | 8019542239 | 8019538911 | Bacteria | 7872763 |
| 243 | 8019547380 | 8019547302 | Bacteria | 7996444 |
| 244 | 8019563887 | 8019555841 | Bacteria | 9642137 |
| 245 | 8040171209 | 8040167225 | Bacteria | 6542727 |
| 246 | ARcpr5oldR_c000173 | |||
| 247 | ARcpr5yngRDRAFT_c000025 | |||
| 248 | ARSoilOldRDRAFT_c000127 | |||
| 249 | JGI24736J21556_1000003 | |||
| 250 | JGI24737J22298_10002816 | |||
| 251 | JGI24735J21928_10004261 | |||
| 252 | JGI24749J21850_1000435 | |||
| 253 | JGI25165J46597_1003373 | |||
| 254 | JGI25153J46596_10000194 | |||
| 255 | JGI25153J46596_10000910 | |||
| 256 | rootH1_10010374 | |||
| 257 | Ga0055532_1000193 | |||
| 258 | Ga0055527_1000348 | |||
| 259 | Ga0055535_1000137 | |||
| 260 | Ga0055542_1002926 | |||
| 261 | Ga0055529_1001429 | |||
| 262 | Ga0065165_1004425 | |||
| 263 | Ga0065704_10074835 | |||
| 264 | Ga0065715_10024003 | |||
| 265 | Ga0070660_100001810 | |||
| 266 | Ga0070660_100003172 | |||
| 267 | Ga0070660_100011689 | |||
| 268 | Ga0070689_100021033 | |||
| 269 | Ga0070661_100015083 | |||
| 270 | Ga0070671_100000715 | |||
| 271 | Ga0070667_100000961 | |||
| 272 | Ga0070679_100030625 | |||
| 273 | Ga0070679_100035853 | |||
| 274 | Ga0070679_100042963 | |||
| 275 | Ga0070679_100059200 | |||
| 276 | Ga0070684_100041050 | |||
| 277 | Ga0068853_100012260 | |||
| 278 | Ga0068855_100011516 | |||
| 279 | Ga0068855_100045970 | |||
| 280 | Ga0068855_100077163 | |||
| 281 | Ga0068857_100005203 | |||
| 282 | Ga0068856_100122731 | |||
| 283 | Ga0068851_10010617 | |||
| 284 | Ga0068862_100000220 | |||
| 285 | Ga0075364_10007301 | |||
| 286 | Ga0075434_100034506 | |||
| 287 | Ga0105240_10004174 | |||
| 288 | Ga0105240_10043225 | |||
| 289 | Ga0105240_10068341 | |||
| 290 | Ga0111539_10001827 | |||
| 291 | Ga0111539_10125085 | |||
| 292 | Ga0105241_10015334 | |||
| 293 | Ga0105237_10028792 | |||
| 294 | Ga0105237_10110318 | |||
| 295 | Ga0105238_10012699 | |||
| 296 | Ga0105249_10021112 | |||
| 297 | Ga0105239_10012104 | |||
| 298 | Ga0105239_10016305 | |||
| 299 | Ga0157370_10080366 | |||
| 300 | Ga0157369_10006895 | |||
| 301 | Ga0157369_10007433 | |||
| 302 | Ga0157369_10008441 | |||
| 303 | Ga0157378_10001958 | |||
| 304 | Ga0163162_10001637 | |||
| 305 | Ga0157375_10048464 | |||
| 306 | Ga0157375_10058179 | |||
| 307 | Ga0157380_10003911 | |||
| 308 | Ga0209672_100015 | |||
| 309 | Ga0209147_100016 | |||
| 310 | Ga0209258_100026 | |||
| 311 | Ga0209677_100529 | |||
| 312 | Ga0209148_1000952 | |||
| 313 | Ga0209233_1000441 | |||
| 314 | Ga0209455_1000321 | |||
| 315 | Ga0209758_1000026 | |||
| 316 | Ga0209758_1000097 | |||
| 317 | Ga0209758_1001118 | |||
| 318 | Ga0209256_1000838 | |||
| 319 | Ga0209257_1000201 | |||
| 320 | Ga0207656_10003190 | |||
| 321 | Ga0207647_10030525 | |||
| 322 | Ga0207705_10003075 | |||
| 323 | Ga0207705_10061832 | |||
| 324 | Ga0207654_10002929 | |||
| 325 | Ga0207707_10019000 | |||
| 326 | Ga0207695_10028037 | |||
| 327 | Ga0207695_10035211 | |||
| 328 | Ga0207695_10047307 | |||
| 329 | Ga0207695_10058418 | |||
| 330 | Ga0207671_10004138 | |||
| 331 | Ga0207660_10020902 | |||
| 332 | Ga0207660_10026530 | |||
| 333 | Ga0207660_10027305 | |||
| 334 | Ga0207657_10000529 | |||
| 335 | Ga0207657_10004280 | |||
| 336 | Ga0207657_10010531 | |||
| 337 | Ga0207652_10008518 | |||
| 338 | Ga0207652_10044249 | |||
| 339 | Ga0207681_10013326 | |||
| 340 | Ga0207694_10003885 | |||
| 341 | Ga0207644_10000538 | |||
| 342 | Ga0207706_10008432 | |||
| 343 | Ga0207706_10042149 | |||
| 344 | Ga0207711_10048000 | |||
| 345 | Ga0207667_10023895 | |||
| 346 | Ga0207667_10024500 | |||
| 347 | Ga0207667_10032794 | |||
| 348 | Ga0207658_10001287 | |||
| 349 | Ga0207702_10024194 | |||
| 350 | Ga0207648_10052717 | |||
| 351 | Ga0207648_10067296 | |||
| 352 | Ga0207674_10017205 | |||
| 353 | Ga0207674_10018459 | |||
| 354 | Ga0207674_10029069 | |||
| 355 | Ga0207675_100036713 | |||
| 356 | Ga0207698_10008960 | |||
| 357 | Ga0207428_10061423 | |||
| 358 | Ga0268265_10000096 | |||
| 359 | Ga0265338_10012054 | |||
| 360 | Ga0265338_10019802 | |||
| 361 | Ga0265325_10018160 | |||
| 362 | Ga0265339_10004360 | |||
| 363 | Ga0265331_10000003 | |||
| 364 | Ga0265331_10004966 | |||
| 365 | Ga0265327_10000384 | |||
| 366 | Ga0265342_10000546 | |||
| 367 | Ga0307516_10004048 | |||
| 368 | Ga0373958_0001978 | |||
| 369 | Ga0373952_0001599 | |||
| 370 | Ga0373932_0002779 | |||
| 371 | Ga0373960_0003288 | |||
| 372 | Ga0373942_0001066 | |||
| 373 | Ga0373931_0025604 | |||
| 374 | Ga0395900_0076418 | |||
| 375 | Ga0466969_0001810 | |||
| 376 | Ga0466966_0002491 | |||
| 377 | Ga0466961_0000070 | |||
| 378 | Ga0453684_0003179 | |||
| 379 | Ga0466959_0003090 | |||
| 380 | Ga0466967_0002969 | |||
| 381 | Ga0495603_0012934 | |||
| 382 | Ga0495638_0000016 | |||
| 383 | Ga0495583_0000290 | |||
| 384 | Ga0495643_0000073 | |||
| 385 | Ga0495648_0000013 | |||
| 386 | Ga0495658_0003071 | |||
| 387 | Ga0495671_0000018 | |||
| 388 | Ga0495581_0032508 | |||
| 389 | Ga0495673_0000130 | |||
| 390 | Ga0496102_0000513 | |||
| 391 | Ga0496102_0015853 | |||
| 392 | Ga0496103_0000345 | |||
| 393 | Ga0496103_0001554 | |||
| 394 | Ga0496112_0000382 | |||
| 395 | Ga0496116_0002635 | |||
| 396 | Ga0496117_0001043 | |||
| 397 | Ga0496117_0009054 | |||
| 398 | Ga0496118_0001091 | |||
| 399 | Ga0496118_0027198 | |||
| 400 | Ga0496121_0000720 | |||
| 401 | Ga0496121_0001983 | |||
| 402 | Ga0496122_0000960 | |||
| 403 | Ga0496122_0001031 | |||
| 404 | Ga0496123_0005552 | |||
| 405 | Ga0496124_0001115 | |||
| 406 | Ga0496125_0000515 | |||
| 407 | Ga0496125_0000744 | |||
| 408 | Ga0496126_0009206 | |||
| 409 | Ga0496126_0044774 | |||
| 410 | Ga0501031_0021897 | |||
| 411 | Ga0501032_0004998 | |||
| 412 | Ga0501032_0008540 | |||
| 413 | Ga0501033_0028916 | |||
| 414 | Ga0501034_0000108 | |||
| 415 | Ga0501034_0000561 | |||
| 416 | Ga0501036_0049654 | |||
| 417 | Ga0501037_0000713 | |||
| 418 | Ga0501039_0000811 | |||
| 419 | Ga0501039_0004020 | |||
| 420 | Ga0501047_0019475 | |||
| 421 | Ga0501048_0000625 | |||
| 422 | Ga0501067_0002646 | |||
| 423 | Ga0501067_0006295 | |||
| 424 | Ga0501067_0008595 | |||
| 425 | Ga0501068_0011795 | |||
| 426 | Ga0501070_0005913 | |||
| 427 | Ga0501070_0011641 | |||
| 428 | Ga0501072_0036346 | |||
| 429 | Ga0501074_0045515 | |||
| 430 | Ga0501077_0036171 | |||
| 431 | Ga0501080_0000159 | |||
| 432 | Ga0501080_0029926 | |||
| 433 | Ga0501083_0005934 | |||
| 434 | Ga0501035_0001338 | |||
| 435 | Ga0501035_0001446 | |||
| 436 | Ga0501044_0055532 | |||
| 437 | Ga0501045_0007098 | |||
| 438 | Ga0501045_0009149 | |||
| 439 | Ga0501045_0041314 | |||
| 440 | nmdc:mga08y16_31784_c1 | |||
| 441 | nmdc:mga08y16_33100_c1 | |||
| 442 | nmdc:mga0n895_57099_c1 | |||
| 443 | Ga0500643_000838 | |||
| 444 | Ga0500554_001787 | |||
| 445 | Ga0500554_006682 | |||
| 446 | Ga0500595_000181 | |||
| 447 | Ga0500608_000476 | |||
| 448 | Ga0500559_0000015 | |||
| 449 | Ga0500603_000221 | |||
| 450 | Ga0500638_000710 | |||
| 451 | Ga0500637_0000116 | |||
| 452 | Ga0500637_0000864 | |||
| 453 | Ga0501084_0023723 | |||
| 454 | Ga0501082_0026390 | |||
| 455 | 2513660664 | |||
| 456 | 2509080232 | |||
| 457 | 2513591001 | |||
| 458 | 2513700697 | |||
| 459 | 2513858313 | |||
| 460 | 2513922457 | |||
| 461 | 2517887330 | |||
| 462 | 2517887499 | |||
| 463 | 2519462176 | |||
| 464 | 2524464644 | |||
| 465 | 2528857297 | |||
| 466 | 2585295715 | |||
| 467 | 2643750588 | |||
| 468 | 2644509662 | |||
| 469 | 2753763208 | |||
| 470 | 2793062805 | |||
| 471 | 2793069477 | |||
| 472 | 2828309578 | |||
| 473 | 2842043054 | |||
| 474 | 2842051095 | |||
| 475 | 2874622142 | |||
| 476 | 2881370160 | |||
| 477 | 2884964264 | |||
| 478 | 2894777333 | |||
| 479 | 2904673228 | |||
| 480 | 2906613371 | |||
| 481 | 2908745824 | |||
| 482 | 2922432324 | |||
| 483 | 2928533741 | |||
| 484 | 2935702735 | |||
| 485 | 3005478984 | |||
| 486 | 8016630755 | |||
| 487 | 8019542239 | |||
| 488 | 8019547380 | |||
| 489 | 8019563887 | |||
| 490 | 8040171209 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3gwi-assembly1.cif.gz_A | crystal structure of mg-atpase nucleotide binding domain | 0.9288 | 333 | 490 |
| 3gwi-assembly1.cif.gz_A | crystal structure of mg-atpase nucleotide binding domain | 0.8908 | 333 | 490 |
| 2voy-assembly1.cif.gz_I | cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus | 0.8596 | 493 | 630 |
| 3a1e-assembly1.cif.gz_A | crystal structure of the p- and n-domains of his462gln mutant copa, a copper-transporting p-type atpase, bound with amppcp-mg | 0.846 | 303 | 635 |
| 3a1c-assembly1.cif.gz_A | crystal structure of the p- and n-domains of copa, a copper-transporting p-type atpase, bound with amppcp-mg | 0.8322 | 303 | 634 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q9VYT4_1008_1079_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9802 | 562 | 623 | 3.40.50.1000 |
| af_A0A1D6I6W5_2_66_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9725 | 561 | 619 | 3.40.50.1000 |
| af_Q557B5_1074_1224_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9646 | 489 | 634 | 3.40.50.1000 |
| af_P9WPS5_1250_1376_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9534 | 498 | 620 | 3.40.50.1000 |
| af_Q4DL46_68_185_3.40.50.1000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like | 0.9534 | 493 | 620 | 3.40.50.1000 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V2L3R7-F1-model_v4 | deleted | 0.9523 | 380 | 465 |
|
| AF-A0A4S0MRB2-F1-model_v4 | Cation-transporting P-type ATPase | 0.9514 | 520 | 609 |
GO:0005388
GO:0005524 GO:0005886 GO:0016887 GO:0043231 |
| AF-A0A7M3MA75-F1-model_v4 | Magnesium-translocating P-type ATPase | 0.9509 | 321 | 531 |
GO:0000166
GO:0005886 |
| AF-A0A5J5A7Y0-F1-model_v4 | Cation-transporting P-type ATPase C-terminal domain-containing protein | 0.9509 | 490 | 645 |
GO:0005388
GO:0005524 GO:0005886 GO:0016887 GO:0043231 |
| AF-A0A1P8Y9R2-F1-model_v4 | HAD ATPase, P-type, IC family protein (EC 3.6.3.-) | 0.9499 | 497 | 644 |
GO:0005507
GO:0005524 GO:0016020 GO:0016887 GO:0043682 GO:0055070 |