F357773

General Info

Members Datasets Scaffolds Average Seq Length
245 159 490 448

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2516143018|2516205230
Length 500
Sequence AILSGLIKRRQPSAIETKALSSITENRGGWFRLFESFPGAWQTNVVVDRNLVLSYHAVYACMTLIASDISKLRVKLMRREENGIWAEFKNAAYDPVLRRPNPIQNRVQFWEGWMLSKLIRGNTYVLKGRDSRGVVNRLYVLDPTRVTPMIADDGSVFYELSADNVAGLTQDVIVPAREIIHDRMNCMFHPLVGVSPIFAAGVAATQGLRIQNNSAWFFGNRSQPGGVLTAPGAISNETAARLKENWDNSFTGENSGKVAVLGDGLKYEQMMLTAEESQLIEQLKWTSEVVCSVFHVPPYKAGVGVMPSNSNIQSLNIEYYSQCLQSLIEAAEICLDEGLEMGPDIGTEFDVDNLLRMDTVTMVTAEKEAVGAGIKSPNEARRRFDLPPVDGGDTPYLQQQNFSLAALAKRDSQPDPFNVAPTQQEAAPPPAEPEGGATKHALPKPRYRIPCDRKVFAAEETTASGDLIKALLSNTISYEQFKASWSGLQTSRAEFEMGAA

Samples

Sample ID Description Type Environment
1 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
6 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
84 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
85 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
92 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
93 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
94 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
108 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
121 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
133 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
145 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
146 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
149 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
150 2516143018 Ensifer sp. BR816 Isolate Nodule
151 2508501050 Microvirga lupini Lut6 Isolate Nodule
152 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
153 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
154 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
155 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
156 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
157 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
158 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
159 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.51
Metatranscriptomes 0
Isolates 4.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.71
Nodule 2.45
Rhizoplane 6.53
Rhizosphere 81.22
Stem 0
Stem Tuber 0
Unclassified 1.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MBSR1b_contig_1956338 2162886012 Bacteria 2712
2 JGI24752J21851_1005663 3300001976 Viruses 1630
3 JGI24743J22301_10007845 3300001991 Bacteria 1860
4 JGI25151J46595_10017209 3300003187 Viruses 3141
5 Ga0055534_1000748 3300003784 Bacteria 15552
6 JGI25405J52794_10003185 3300003911 Bacteria 2857
7 Ga0065712_10068038 3300005290 Bacteria 16379
8 Ga0065712_10070557 3300005290 Bacteria 5908
9 Ga0065712_10073785 3300005290 Bacteria 4279
10 Ga0065712_10123738 3300005290 Bacteria 1634
11 Ga0070670_100174773 3300005331 Bacteria 1864
12 Ga0070677_10044341 3300005333 Unclassified 1769
13 Ga0070666_10021297 3300005335 Bacteria 4201
14 Ga0068868_100105520 3300005338 Bacteria 2285
15 Ga0070668_100036172 3300005347 Viruses 3768
16 Ga0070669_100005179 3300005353 Bacteria 9433
17 Ga0070675_100007251 3300005354 Bacteria 8552
18 Ga0070675_100021869 3300005354 Archaea 5110
19 Ga0070675_100042978 3300005354 Bacteria 3692
20 Ga0070674_100000363 3300005356 Bacteria 22686
21 Ga0070674_100002907 3300005356 Bacteria 9487
22 Ga0070674_100003024 3300005356 Bacteria 9352
23 Ga0070674_100005203 3300005356 Bacteria 7480
24 Ga0070674_100024058 3300005356 Viruses 3951
25 Ga0070673_100054783 3300005364 Bacteria 3139
26 Ga0070667_100013775 3300005367 Bacteria 6685
27 Ga0070694_100004351 3300005444 Bacteria 8517
28 Ga0070663_100063538 3300005455 Viruses 2666
29 Ga0070678_100003409 3300005456 Bacteria 8862
30 Ga0070678_100008503 3300005456 Bacteria 6149
31 Ga0070662_100043092 3300005457 Bacteria 3227
32 Ga0070662_100135700 3300005457 Bacteria 1902
33 Ga0070685_10007911 3300005466 Bacteria 5446
34 Ga0070685_10015314 3300005466 Viruses 4071
35 Ga0070672_100040774 3300005543 Archaea 3565
36 Ga0070672_100042449 3300005543 Viruses 3502
37 Ga0070686_100002419 3300005544 Bacteria 10284
38 Ga0070686_100020740 3300005544 Bacteria 3893
39 Ga0070702_100053099 3300005615 Viruses 2327
40 Ga0068866_10076282 3300005718 Bacteria 1787
41 Ga0068862_100010036 3300005844 Bacteria 7822
42 Ga0068862_100048768 3300005844 Viruses 3616
43 Ga0081455_10000166 3300005937 Bacteria 81984
44 Ga0081455_10009152 3300005937 Bacteria 10214
45 Ga0081455_10012410 3300005937 Bacteria 8500
46 Ga0081455_10072141 3300005937 Bacteria 2860
47 Ga0081455_10119723 3300005937 Unclassified 2076
48 Ga0070717_10026906 3300006028 Viruses 4593
49 Ga0068871_100004184 3300006358 Bacteria 9992
50 Ga0068871_100082879 3300006358 Bacteria 2660
51 Ga0075428_100157949 3300006844 Viruses 2462
52 Ga0075430_100009901 3300006846 Bacteria 8061
53 Ga0075430_100016069 3300006846 Bacteria 6373
54 Ga0075429_100000039 3300006880 Bacteria 60356
55 Ga0075429_100003032 3300006880 Bacteria 14237
56 Ga0068865_100000111 3300006881 Bacteria 41607
57 Ga0068865_100000931 3300006881 Bacteria 16602
58 Ga0105251_10016291 3300009011 Bacteria 4022
59 Ga0105244_10002921 3300009036 Bacteria 12620
60 Ga0105240_10025133 3300009093 Bacteria 7832
61 Ga0111539_10022831 3300009094 Bacteria 7685
62 Ga0105245_10004646 3300009098 Bacteria 12133
63 Ga0105245_10011000 3300009098 Bacteria 7875
64 Ga0105245_10015048 3300009098 Bacteria 6742
65 Ga0105243_10016512 3300009148 Bacteria 5581
66 Ga0105242_10003648 3300009176 Bacteria 11982
67 Ga0105242_10024987 3300009176 Bacteria 4722
68 Ga0105242_10034309 3300009176 Bacteria 4067
69 Ga0105248_10070784 3300009177 Bacteria 3917
70 Ga0105248_10105967 3300009177 Bacteria 3170
71 Ga0105238_10019426 3300009551 Bacteria 6920
72 Ga0105249_10000323 3300009553 Bacteria 48519
73 Ga0105249_10070858 3300009553 Bacteria 3219
74 Ga0105239_10000408 3300010375 Bacteria 62991
75 Ga0163162_10001364 3300013306 Bacteria 22725
76 Ga0163162_10100537 3300013306 Bacteria 2983
77 Ga0163162_10129977 3300013306 Bacteria 2627
78 Ga0157375_10000932 3300013308 Bacteria 25343
79 Ga0157375_10014013 3300013308 Bacteria 7149
80 Ga0157375_10142578 3300013308 Bacteria 2524
81 Ga0157380_10001462 3300014326 Bacteria 15461
82 Ga0157380_10002030 3300014326 Bacteria 13523
83 Ga0157380_10012651 3300014326 Bacteria 6125
84 Ga0157380_10021667 3300014326 Archaea 4824
85 Ga0157380_10061246 3300014326 Viruses 3010
86 Ga0157379_10001112 3300014968 Bacteria 22006
87 Ga0157376_10000680 3300014969 Bacteria 22007
88 Ga0157376_10000990 3300014969 Bacteria 18525
89 Ga0157376_10001039 3300014969 Bacteria 18205
90 Ga0157376_10002385 3300014969 Bacteria 12690
91 Ga0157376_10004335 3300014969 Bacteria 9864
92 Ga0157376_10004973 3300014969 Bacteria 9267
93 Ga0157376_10018670 3300014969 Bacteria 5324
94 Ga0157376_10043050 3300014969 Bacteria 3704
95 Ga0157376_10083277 3300014969 Bacteria 2751
96 Ga0163161_10050250 3300017792 Bacteria 3017
97 Ga0163161_10144987 3300017792 Bacteria 1800
98 Ga0209674_100331 3300025226 Bacteria 28743
99 Ga0209675_1001326 3300025291 Bacteria 14654
100 Ga0209675_1004270 3300025291 Bacteria 6430
101 Ga0209025_1000623 3300025294 Bacteria 62920
102 Ga0209564_1005242 3300025295 Bacteria 7496
103 Ga0207655_1001332 3300025728 Bacteria 23285
104 Ga0207713_1049255 3300025735 Bacteria 1690
105 Ga0207682_10006361 3300025893 Viruses 4765
106 Ga0207680_10009951 3300025903 Bacteria 4738
107 Ga0207645_10055760 3300025907 Archaea 2523
108 Ga0207681_10003662 3300025923 Bacteria 9549
109 Ga0207681_10063929 3300025923 Bacteria 2539
110 Ga0207694_10010714 3300025924 Bacteria 6922
111 Ga0207659_10000272 3300025926 Bacteria 31495
112 Ga0207687_10007442 3300025927 Bacteria 7209
113 Ga0207687_10023130 3300025927 Bacteria 4140
114 Ga0207687_10045290 3300025927 Viruses 3040
115 Ga0207687_10048730 3300025927 Viruses 2943
116 Ga0207644_10007520 3300025931 Bacteria 7102
117 Ga0207706_10058003 3300025933 Bacteria 3411
118 Ga0207706_10080234 3300025933 Bacteria 2869
119 Ga0207706_10092445 3300025933 Viruses 2660
120 Ga0207686_10000307 3300025934 Bacteria 35390
121 Ga0207686_10003712 3300025934 Bacteria 8187
122 Ga0207686_10010455 3300025934 Bacteria 5054
123 Ga0207686_10058033 3300025934 Viruses 2439
124 Ga0207709_10009115 3300025935 Bacteria 5469
125 Ga0207709_10036898 3300025935 Bacteria 2900
126 Ga0207709_10152196 3300025935 Bacteria 1603
127 Ga0207669_10000918 3300025937 Bacteria 12485
128 Ga0207669_10001768 3300025937 Bacteria 9168
129 Ga0207669_10002651 3300025937 Bacteria 7661
130 Ga0207669_10008592 3300025937 Bacteria 4804
131 Ga0207669_10017297 3300025937 Viruses 3693
132 Ga0207669_10018672 3300025937 Bacteria 3591
133 Ga0207704_10000129 3300025938 Bacteria 41439
134 Ga0207704_10002342 3300025938 Bacteria 8505
135 Ga0207711_10014689 3300025941 Bacteria 6507
136 Ga0207651_10004161 3300025960 Bacteria 7237
137 Ga0207712_10000283 3300025961 Bacteria 48519
138 Ga0207668_10010581 3300025972 Bacteria 5579
139 Ga0207668_10016939 3300025972 Bacteria 4560
140 Ga0207668_10031739 3300025972 Bacteria 3483
141 Ga0207658_10029868 3300025986 Bacteria 3854
142 Ga0207677_10138248 3300026023 Viruses 1861
143 Ga0207678_10185062 3300026067 Viruses 1779
144 Ga0207702_10008392 3300026078 Bacteria 8716
145 Ga0207683_10003651 3300026121 Bacteria 13387
146 Ga0207683_10010210 3300026121 Bacteria 8008
147 Ga0207683_10010953 3300026121 Archaea 7734
148 Ga0207683_10155924 3300026121 Viruses 2062
149 Ga0268265_10006627 3300028380 Bacteria 7837
150 Ga0265327_10037999 3300031251 Viruses 2630
151 Ga0307416_100055682 3300032002 Viruses 3187
152 Ga0373941_0000173 3300035115 Bacteria 11955
153 Ga0373953_0006389 3300035117 Viruses 3880
154 Ga0373931_0000126 3300035691 Bacteria 34679
155 Ga0395899_0000750 3300037312 Bacteria 32183
156 Ga0395900_0001226 3300037418 Bacteria 31540
157 Ga0395898_0000729 3300037466 Bacteria 57774
158 Ga0395898_0000785 3300037466 Bacteria 54500
159 Ga0395898_0007508 3300037466 Bacteria 11586
160 Ga0395905_0001246 3300037471 Bacteria 31522
161 Ga0395905_0007586 3300037471 Bacteria 10774
162 Ga0395905_0012899 3300037471 Bacteria 8034
163 Ga0395905_0029959 3300037471 Bacteria 5129
164 Ga0395901_0000756 3300038443 Bacteria 36321
165 Ga0439436_0000854 3300041404 Bacteria 8321
166 Ga0451797_0036098 3300041453 Bacteria 18341
167 Ga0451807_0944343 3300041486 Viruses 2850
168 Ga0466968_0003671 3300044735 Bacteria 5691
169 Ga0495592_0008580 3300046454 Bacteria 7671
170 Ga0495582_0000175 3300046473 Bacteria 34714
171 Ga0495662_0000132 3300046476 Bacteria 28280
172 Ga0495585_0052618 3300046492 Bacteria 2254
173 Ga0495608_0001654 3300046511 Bacteria 16043
174 Ga0495618_0002988 3300046514 Bacteria 10690
175 Ga0495628_0099392 3300046516 Unclassified 2247
176 Ga0495652_0000293 3300046529 Bacteria 59478
177 Ga0495586_0003969 3300046535 Bacteria 7938
178 Ga0495645_0000453 3300046543 Bacteria 28172
179 Ga0495633_0030509 3300046558 Bacteria 2618
180 Ga0495668_0015357 3300046616 Viruses 4473
181 Ga0495634_0009043 3300046642 Bacteria 7366
182 Ga0495611_0000080 3300046648 Bacteria 67913
183 Ga0495625_0023295 3300046660 Bacteria 4732
184 Ga0495657_0009219 3300046675 Bacteria 7489
185 Ga0495599_0015299 3300046678 Viruses 4760
186 Ga0495658_0000196 3300046683 Bacteria 35012
187 Ga0495624_0059680 3300046690 Bacteria 2393
188 Ga0495649_0000125 3300046694 Bacteria 67434
189 Ga0495649_0059660 3300046694 Bacteria 2054
190 Ga0495674_0014065 3300047319 Bacteria 7502
191 Ga0495674_0132876 3300047319 Bacteria 2096
192 Ga0495676_0004471 3300047321 Bacteria 12779
193 Ga0495680_0001361 3300047322 Bacteria 26538
194 Ga0495680_0030286 3300047322 Viruses 4420
195 Ga0495687_017847 3300047443 Bacteria 3524
196 Ga0495684_0009312 3300047471 Bacteria 7581
197 Ga0495602_0014093 3300048088 Bacteria 8130
198 Ga0495614_0000056 3300048089 Bacteria 34860
199 Ga0496100_0000616 3300048903 Bacteria 16854
200 Ga0496100_0070784 3300048903 Bacteria 2327
201 Ga0496101_0000590 3300048904 Bacteria 22116
202 Ga0496101_0013814 3300048904 Bacteria 5420
203 Ga0496101_0031519 3300048904 Bacteria 3728
204 Ga0496102_0030513 3300048905 Bacteria 4826
205 Ga0496103_0000438 3300048906 Bacteria 35946
206 Ga0496106_0000215 3300048909 Bacteria 40207
207 Ga0496107_0000175 3300048910 Bacteria 33179
208 Ga0496114_0000327 3300048917 Bacteria 34675
209 Ga0496114_0005299 3300048917 Bacteria 10078
210 Ga0496114_0050537 3300048917 Bacteria 3461
211 Ga0496115_0000347 3300048918 Bacteria 39303
212 Ga0496116_0036535 3300048919 Bacteria 3435
213 Ga0496117_0010302 3300048920 Bacteria 8548
214 Ga0496119_0000782 3300048922 Bacteria 42502
215 Ga0496120_0000297 3300048923 Bacteria 83278
216 Ga0496120_0000669 3300048923 Bacteria 50381
217 Ga0496121_0011464 3300048924 Bacteria 9839
218 Ga0496123_0090826 3300048926 Bacteria 1814
219 Ga0496126_0005005 3300048929 Bacteria 15434
220 Ga0501291_000056 3300049514 Bacteria 14356
221 nmdc:mga09592_2739_c1 3300050508 Bacteria 14243
222 nmdc:mga09592_65_c1 3300050508 Bacteria 60218
223 nmdc:mga0qj67_1971_c1 3300050509 Bacteria 14614
224 nmdc:mga0qj67_6476_c1 3300050509 Bacteria 8605
225 nmdc:mga08y16_17562_c1 3300050511 Bacteria 7535
226 Ga0495595_0000736 3300053084 Bacteria 12422
227 Ga0495619_0000658 3300053085 Bacteria 22637
228 Ga0500643_001326 3300053087 Bacteria 14459
229 Ga0500583_0000061 3300053092 Bacteria 67921
230 Ga0500562_002619 3300053108 Bacteria 4480
231 Ga0500658_0000046 3300053134 Bacteria 66782
232 Ga0500616_0000338 3300053153 Bacteria 66942
233 Ga0500633_0001226 3300053160 Bacteria 4699
234 Ga0500634_0000053 3300053161 Bacteria 52099
235 2516205230 2516143018 Bacteria 6951533
236 2508732499 2508501050 Bacteria 9633614
237 2516024210 2515154189 Bacteria 9629850
238 2857350916 2857349434 Bacteria 7926032
239 2881613021 2881609920 Bacteria 4405319
240 2939606071 2939602548 Bacteria 4950493
241 2978979169 2978975091 Bacteria 4704313
242 2987638101 2987636660 Bacteria 8088555
243 642426813 641736151 Bacteria 7477263
244 643600330 643348564 Bacteria 8839022
245 643601937 643348564 Bacteria 8839022
246 MBSR1b_contig_1956338
247 JGI24752J21851_1005663
248 JGI24743J22301_10007845
249 JGI25151J46595_10017209
250 Ga0055534_1000748
251 JGI25405J52794_10003185
252 Ga0065712_10068038
253 Ga0065712_10070557
254 Ga0065712_10073785
255 Ga0065712_10123738
256 Ga0070670_100174773
257 Ga0070677_10044341
258 Ga0070666_10021297
259 Ga0068868_100105520
260 Ga0070668_100036172
261 Ga0070669_100005179
262 Ga0070675_100007251
263 Ga0070675_100021869
264 Ga0070675_100042978
265 Ga0070674_100000363
266 Ga0070674_100002907
267 Ga0070674_100003024
268 Ga0070674_100005203
269 Ga0070674_100024058
270 Ga0070673_100054783
271 Ga0070667_100013775
272 Ga0070694_100004351
273 Ga0070663_100063538
274 Ga0070678_100003409
275 Ga0070678_100008503
276 Ga0070662_100043092
277 Ga0070662_100135700
278 Ga0070685_10007911
279 Ga0070685_10015314
280 Ga0070672_100040774
281 Ga0070672_100042449
282 Ga0070686_100002419
283 Ga0070686_100020740
284 Ga0070702_100053099
285 Ga0068866_10076282
286 Ga0068862_100010036
287 Ga0068862_100048768
288 Ga0081455_10000166
289 Ga0081455_10009152
290 Ga0081455_10012410
291 Ga0081455_10072141
292 Ga0081455_10119723
293 Ga0070717_10026906
294 Ga0068871_100004184
295 Ga0068871_100082879
296 Ga0075428_100157949
297 Ga0075430_100009901
298 Ga0075430_100016069
299 Ga0075429_100000039
300 Ga0075429_100003032
301 Ga0068865_100000111
302 Ga0068865_100000931
303 Ga0105251_10016291
304 Ga0105244_10002921
305 Ga0105240_10025133
306 Ga0111539_10022831
307 Ga0105245_10004646
308 Ga0105245_10011000
309 Ga0105245_10015048
310 Ga0105243_10016512
311 Ga0105242_10003648
312 Ga0105242_10024987
313 Ga0105242_10034309
314 Ga0105248_10070784
315 Ga0105248_10105967
316 Ga0105238_10019426
317 Ga0105249_10000323
318 Ga0105249_10070858
319 Ga0105239_10000408
320 Ga0163162_10001364
321 Ga0163162_10100537
322 Ga0163162_10129977
323 Ga0157375_10000932
324 Ga0157375_10014013
325 Ga0157375_10142578
326 Ga0157380_10001462
327 Ga0157380_10002030
328 Ga0157380_10012651
329 Ga0157380_10021667
330 Ga0157380_10061246
331 Ga0157379_10001112
332 Ga0157376_10000680
333 Ga0157376_10000990
334 Ga0157376_10001039
335 Ga0157376_10002385
336 Ga0157376_10004335
337 Ga0157376_10004973
338 Ga0157376_10018670
339 Ga0157376_10043050
340 Ga0157376_10083277
341 Ga0163161_10050250
342 Ga0163161_10144987
343 Ga0209674_100331
344 Ga0209675_1001326
345 Ga0209675_1004270
346 Ga0209025_1000623
347 Ga0209564_1005242
348 Ga0207655_1001332
349 Ga0207713_1049255
350 Ga0207682_10006361
351 Ga0207680_10009951
352 Ga0207645_10055760
353 Ga0207681_10003662
354 Ga0207681_10063929
355 Ga0207694_10010714
356 Ga0207659_10000272
357 Ga0207687_10007442
358 Ga0207687_10023130
359 Ga0207687_10045290
360 Ga0207687_10048730
361 Ga0207644_10007520
362 Ga0207706_10058003
363 Ga0207706_10080234
364 Ga0207706_10092445
365 Ga0207686_10000307
366 Ga0207686_10003712
367 Ga0207686_10010455
368 Ga0207686_10058033
369 Ga0207709_10009115
370 Ga0207709_10036898
371 Ga0207709_10152196
372 Ga0207669_10000918
373 Ga0207669_10001768
374 Ga0207669_10002651
375 Ga0207669_10008592
376 Ga0207669_10017297
377 Ga0207669_10018672
378 Ga0207704_10000129
379 Ga0207704_10002342
380 Ga0207711_10014689
381 Ga0207651_10004161
382 Ga0207712_10000283
383 Ga0207668_10010581
384 Ga0207668_10016939
385 Ga0207668_10031739
386 Ga0207658_10029868
387 Ga0207677_10138248
388 Ga0207678_10185062
389 Ga0207702_10008392
390 Ga0207683_10003651
391 Ga0207683_10010210
392 Ga0207683_10010953
393 Ga0207683_10155924
394 Ga0268265_10006627
395 Ga0265327_10037999
396 Ga0307416_100055682
397 Ga0373941_0000173
398 Ga0373953_0006389
399 Ga0373931_0000126
400 Ga0395899_0000750
401 Ga0395900_0001226
402 Ga0395898_0000729
403 Ga0395898_0000785
404 Ga0395898_0007508
405 Ga0395905_0001246
406 Ga0395905_0007586
407 Ga0395905_0012899
408 Ga0395905_0029959
409 Ga0395901_0000756
410 Ga0439436_0000854
411 Ga0451797_0036098
412 Ga0451807_0944343
413 Ga0466968_0003671
414 Ga0495592_0008580
415 Ga0495582_0000175
416 Ga0495662_0000132
417 Ga0495585_0052618
418 Ga0495608_0001654
419 Ga0495618_0002988
420 Ga0495628_0099392
421 Ga0495652_0000293
422 Ga0495586_0003969
423 Ga0495645_0000453
424 Ga0495633_0030509
425 Ga0495668_0015357
426 Ga0495634_0009043
427 Ga0495611_0000080
428 Ga0495625_0023295
429 Ga0495657_0009219
430 Ga0495599_0015299
431 Ga0495658_0000196
432 Ga0495624_0059680
433 Ga0495649_0000125
434 Ga0495649_0059660
435 Ga0495674_0014065
436 Ga0495674_0132876
437 Ga0495676_0004471
438 Ga0495680_0001361
439 Ga0495680_0030286
440 Ga0495687_017847
441 Ga0495684_0009312
442 Ga0495602_0014093
443 Ga0495614_0000056
444 Ga0496100_0000616
445 Ga0496100_0070784
446 Ga0496101_0000590
447 Ga0496101_0013814
448 Ga0496101_0031519
449 Ga0496102_0030513
450 Ga0496103_0000438
451 Ga0496106_0000215
452 Ga0496107_0000175
453 Ga0496114_0000327
454 Ga0496114_0005299
455 Ga0496114_0050537
456 Ga0496115_0000347
457 Ga0496116_0036535
458 Ga0496117_0010302
459 Ga0496119_0000782
460 Ga0496120_0000297
461 Ga0496120_0000669
462 Ga0496121_0011464
463 Ga0496123_0090826
464 Ga0496126_0005005
465 Ga0501291_000056
466 nmdc:mga09592_2739_c1
467 nmdc:mga09592_65_c1
468 nmdc:mga0qj67_1971_c1
469 nmdc:mga0qj67_6476_c1
470 nmdc:mga08y16_17562_c1
471 Ga0495595_0000736
472 Ga0495619_0000658
473 Ga0500643_001326
474 Ga0500583_0000061
475 Ga0500562_002619
476 Ga0500658_0000046
477 Ga0500616_0000338
478 Ga0500633_0001226
479 Ga0500634_0000053
480 2516205230
481 2508732499
482 2516024210
483 2857350916
484 2881613021
485 2939606071
486 2978979169
487 2987638101
488 642426813
489 643600330
490 643601937

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04860

Phage_portal

Phage portal protein

56

385

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8cez-assembly1.cif.gz_B hk97 portal protein in situ (prohead ii) 0.8363 45 379
8fql-assembly1.cif.gz_A portal vertex of hk97 phage 0.8285 48 378
8fql-assembly1.cif.gz_A portal vertex of hk97 phage 0.7933 48 378
3kdr-assembly1.cif.gz_A the crystal structure of a hk97 family phage portal protein from corynebacterium diphtheriae to 2.9a 0.7835 51 359
3kdr-assembly1.cif.gz_B the crystal structure of a hk97 family phage portal protein from corynebacterium diphtheriae to 2.9a 0.7808 51 359
ID Description Score Start End Superfamily
af_Q4DTR0_147_379_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7084 145 177 2.130.10.10
af_G3V658_98_184_3.30.720.50 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.6785 71 90 3.30.720.50
af_A0A0R4IGH0_41_194_3.50.30.30 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1; 0.6747 123 149 3.50.30.30
3f08B00 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.62 128 164 3.30.530.20
af_E7F6B0_78_164_3.30.720.50 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.5898 71 90 3.30.720.50
ID Description Score Start End GO Terms
AF-A0A2X2LGR9-F1-model_v4 Phage portal protein, HK97 family 0.9288 34 239
AF-A0A6D1E7J4-F1-model_v4 deleted 0.9048 21 353
AF-A0A4T4LQ71-F1-model_v4 Phage portal protein 0.8858 34 395
AF-A0A377D2P1-F1-model_v4 Phage portal protein 0.8836 101 395
AF-A0A6M1CLI9-F1-model_v4 deleted 0.8829 59 203

Map