F357802
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 245 | 172 | 490 | 216 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2932422444|2932423594 |
| Length | 245 |
| Sequence | RRPEALLSEAPLGTSALRQHMHQNKLSPMKTADIEPFFATLKAANPSPQTELEYTSVFELLTAVLLSAQATDVGVNKATRKLFPVANTPQAILDLGLDGLESHIKTIGLYRSKAKHLMETCRMLVQLHGGKVPDNREALEALPGVGRKTANVVLNVAFGQPTMAVDTHIFRVGNRTGLAPGKNPLEVEKQLMKRVPDEYAVDSHHWLILLGRYVCQARKPRCWECVVAPYCDFTPKTPAPASGKR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 2 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 3 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 4 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 5 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 6 | 3300004625 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 | Metagenome | Endosphere |
| 7 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 8 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 11 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 20 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 21 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 22 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 23 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 24 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 25 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 26 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 27 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 28 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 30 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 31 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300006944 | Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW | Metagenome | Nodule |
| 33 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 34 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300012497 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 | Metagenome | Rhizosphere |
| 40 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 47 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 49 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 50 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 52 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 73 | 3300027296 | Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) | Metagenome | Nodule |
| 74 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300027614 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 79 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 80 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 81 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 82 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 83 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 84 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 85 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 86 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 87 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 88 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 89 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 90 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 91 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 92 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 93 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 94 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 95 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 96 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 97 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 98 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 99 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 100 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 101 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 102 | 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Metagenome | Rhizosphere |
| 103 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 104 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 105 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 106 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 107 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 108 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 109 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 110 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 111 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 112 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 113 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 114 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 115 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 116 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 117 | 3300042120 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 | Metagenome | Rhizosphere |
| 118 | 3300042131 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 | Metagenome | Rhizosphere |
| 119 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 120 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 121 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 122 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 123 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 124 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 131 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 132 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 133 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 134 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 135 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 136 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 137 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 138 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 139 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 140 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 142 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 143 | 3300049764 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control | Metagenome | Rhizosphere |
| 144 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 146 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 147 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 148 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 149 | 2932422444 | Comamonas sp. 4034 | Isolate | Rhizosphere |
| 150 | 2547132374 | Acidovorax radicis N35 | Isolate | Unclassified |
| 151 | 2643221570 | Acidovorax sp. Root568 | Isolate | Unclassified |
| 152 | 2643221596 | Acidovorax sp. Root70 | Isolate | Unclassified |
| 153 | 2643221609 | Acidovorax sp. Root217 | Isolate | Unclassified |
| 154 | 2643221611 | Acidovorax sp. Root219 | Isolate | Unclassified |
| 155 | 2643221639 | Pelomonas sp. Root1217 | Isolate | Unclassified |
| 156 | 2643221646 | Pelomonas sp. Root1237 | Isolate | Unclassified |
| 157 | 2643221652 | Acidovorax sp. Root402 | Isolate | Unclassified |
| 158 | 2643221717 | Acidovorax sp. Root267 | Isolate | Unclassified |
| 159 | 2721755523 | Delftia sp. HK171 | Isolate | Unclassified |
| 160 | 2738541337 | Pelomonas sp. BT06 | Isolate | Unclassified |
| 161 | 2738543012 | Acidovorax sp. CF301 | Isolate | Unclassified |
| 162 | 2816332133 | Acidovorax radicis 2721A | Isolate | Unclassified |
| 163 | 2831864461 | Roseateles noduli HZ7 | Isolate | Nodule |
| 164 | 2839138175 | Delftia acidovorans B15 | Isolate | Rhizosphere |
| 165 | 2842718218 | Acidovorax sp. R-73343 | Isolate | Unclassified |
| 166 | 2857537821 | Achromobacter sp. R-71975 | Isolate | Unclassified |
| 167 | 2858950400 | Achromobacter sp. K91 | Isolate | Unclassified |
| 168 | 2886848708 | Mitsuaria sp. TWR114 | Isolate | Rhizosphere |
| 169 | 2894023352 | Diaphorobacter ruginosibacter DSM 27467 | Isolate | Nodule |
| 170 | 2919704043 | Hydrogenophaga palleronii 4249 | Isolate | Unclassified |
| 171 | 2974320154 | Acidovorax wautersii SORGH_AS 335 | Isolate | Unclassified |
| 172 | 2990710928 | Acidovorax delafieldii SLBN-75 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.2 |
| Metatranscriptomes | 0 |
| Isolates | 9.8 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 14.69 |
| Nodule | 2.45 |
| Rhizoplane | 2.86 |
| Rhizosphere | 66.94 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootL2_10008667 | 3300003322 | Bacteria | 9480 |
| 2 | Ga0055525_1000011 | 3300003759 | Bacteria | 503124 |
| 3 | Ga0055526_1001023 | 3300003771 | Bacteria | 20456 |
| 4 | Ga0055524_1008226 | 3300003775 | Bacteria | 4352 |
| 5 | Ga0055524_1024287 | 3300003775 | Bacteria | 1927 |
| 6 | Ga0055531_10000078 | 3300003794 | Bacteria | 105599 |
| 7 | Ga0055531_10011352 | 3300003794 | Bacteria | 4310 |
| 8 | Ga0055531_10011505 | 3300003794 | Bacteria | 4257 |
| 9 | Ga0055543_1004332 | 3300004625 | Bacteria | 3897 |
| 10 | Ga0055543_1005274 | 3300004625 | Bacteria | 3328 |
| 11 | Ga0065165_1000613 | 3300005262 | Bacteria | 51836 |
| 12 | Ga0065165_1000652 | 3300005262 | Bacteria | 50081 |
| 13 | Ga0070676_10003923 | 3300005328 | Bacteria | 7807 |
| 14 | Ga0070690_100239575 | 3300005330 | Bacteria | 1279 |
| 15 | Ga0068869_100011586 | 3300005334 | Bacteria | 5789 |
| 16 | Ga0070666_10003688 | 3300005335 | Bacteria | 9281 |
| 17 | Ga0070666_10186579 | 3300005335 | Bacteria | 1456 |
| 18 | Ga0070689_100295090 | 3300005340 | Bacteria | 1348 |
| 19 | Ga0070671_100067692 | 3300005355 | Bacteria | 2977 |
| 20 | Ga0070674_100002137 | 3300005356 | Bacteria | 10855 |
| 21 | Ga0070673_100004218 | 3300005364 | Bacteria | 9071 |
| 22 | Ga0070673_100459699 | 3300005364 | Bacteria | 1146 |
| 23 | Ga0070678_100828311 | 3300005456 | Bacteria | 842 |
| 24 | Ga0068867_100010602 | 3300005459 | Bacteria | 6501 |
| 25 | Ga0070665_100083198 | 3300005548 | Bacteria | 3205 |
| 26 | Ga0068856_100072520 | 3300005614 | Bacteria | 3409 |
| 27 | Ga0068859_100644258 | 3300005617 | Bacteria | 1152 |
| 28 | Ga0068864_100043400 | 3300005618 | Bacteria | 3850 |
| 29 | Ga0068870_10020325 | 3300005840 | Bacteria | 3232 |
| 30 | Ga0068863_100054750 | 3300005841 | Bacteria | 3780 |
| 31 | Ga0068858_101075128 | 3300005842 | Bacteria | 789 |
| 32 | Ga0068860_100061830 | 3300005843 | Bacteria | 3558 |
| 33 | Ga0075364_10002308 | 3300006051 | Bacteria | 10688 |
| 34 | Ga0075366_10013243 | 3300006195 | Bacteria | 4691 |
| 35 | Ga0075366_10156802 | 3300006195 | Bacteria | 1379 |
| 36 | Ga0075366_10179763 | 3300006195 | Bacteria | 1285 |
| 37 | Ga0097621_100149183 | 3300006237 | Bacteria | 2004 |
| 38 | Ga0075370_10003217 | 3300006353 | Bacteria | 7726 |
| 39 | Ga0075370_10058982 | 3300006353 | Bacteria | 2183 |
| 40 | Ga0068865_100120843 | 3300006881 | Bacteria | 1947 |
| 41 | Ga0097620_100644286 | 3300006931 | Bacteria | 1152 |
| 42 | Ga0099823_1013693 | 3300006944 | Bacteria | 8145 |
| 43 | Ga0079104_1000004 | 3300006946 | Bacteria | 444549 |
| 44 | Ga0105250_10007156 | 3300009092 | Bacteria | 4815 |
| 45 | Ga0105245_10026614 | 3300009098 | Bacteria | 5092 |
| 46 | Ga0105245_10138955 | 3300009098 | Bacteria | 2286 |
| 47 | Ga0105243_10001592 | 3300009148 | Bacteria | 19792 |
| 48 | Ga0105242_10001169 | 3300009176 | Bacteria | 20656 |
| 49 | Ga0105242_10778307 | 3300009176 | Bacteria | 945 |
| 50 | Ga0105238_10157766 | 3300009551 | Bacteria | 2244 |
| 51 | Ga0105238_11230247 | 3300009551 | Bacteria | 774 |
| 52 | Ga0157319_1000006 | 3300012497 | Bacteria | 361506 |
| 53 | Ga0157378_10030728 | 3300013297 | Bacteria | 4743 |
| 54 | Ga0163162_10034096 | 3300013306 | Bacteria | 5064 |
| 55 | Ga0157375_10193530 | 3300013308 | Bacteria | 2189 |
| 56 | Ga0157375_10347821 | 3300013308 | Bacteria | 1648 |
| 57 | Ga0163163_10097563 | 3300014325 | Bacteria | 2959 |
| 58 | Ga0157376_10013474 | 3300014969 | Bacteria | 6101 |
| 59 | Ga0163161_10019942 | 3300017792 | Bacteria | 4702 |
| 60 | Ga0213872_10000011 | 3300021361 | Bacteria | 194139 |
| 61 | Ga0213872_10000013 | 3300021361 | Bacteria | 182866 |
| 62 | Ga0213872_10000043 | 3300021361 | Bacteria | 117678 |
| 63 | Ga0213872_10000172 | 3300021361 | Bacteria | 58334 |
| 64 | Ga0213872_10003732 | 3300021361 | Bacteria | 8326 |
| 65 | Ga0213872_10024566 | 3300021361 | Bacteria | 2773 |
| 66 | Ga0213872_10028082 | 3300021361 | Bacteria | 2582 |
| 67 | Ga0213872_10055851 | 3300021361 | Bacteria | 1789 |
| 68 | Ga0209563_100005 | 3300025230 | Bacteria | 1774893 |
| 69 | Ga0209673_1004857 | 3300025273 | Bacteria | 7022 |
| 70 | Ga0209564_1000003 | 3300025295 | Bacteria | 1585848 |
| 71 | Ga0209050_1002123 | 3300025298 | Bacteria | 18059 |
| 72 | Ga0209050_1004287 | 3300025298 | Bacteria | 9759 |
| 73 | Ga0209256_1001979 | 3300025299 | Bacteria | 18465 |
| 74 | Ga0209256_1005905 | 3300025299 | Bacteria | 6770 |
| 75 | Ga0209051_1003875 | 3300025303 | Bacteria | 9554 |
| 76 | Ga0209051_1004008 | 3300025303 | Bacteria | 9332 |
| 77 | Ga0209257_1000032 | 3300025304 | Bacteria | 680354 |
| 78 | Ga0209257_1002360 | 3300025304 | Bacteria | 18953 |
| 79 | Ga0209257_1009881 | 3300025304 | Bacteria | 4980 |
| 80 | Ga0207680_10059259 | 3300025903 | Bacteria | 2324 |
| 81 | Ga0207645_10007379 | 3300025907 | Bacteria | 7776 |
| 82 | Ga0207643_10025252 | 3300025908 | Bacteria | 3283 |
| 83 | Ga0207649_10649400 | 3300025920 | Bacteria | 815 |
| 84 | Ga0207687_10138603 | 3300025927 | Bacteria | 1843 |
| 85 | Ga0207644_10010837 | 3300025931 | Bacteria | 6018 |
| 86 | Ga0207644_10123654 | 3300025931 | Bacteria | 1973 |
| 87 | Ga0207644_10738706 | 3300025931 | Bacteria | 822 |
| 88 | Ga0207686_10005429 | 3300025934 | Bacteria | 6841 |
| 89 | Ga0207686_10157230 | 3300025934 | Bacteria | 1589 |
| 90 | Ga0207709_10000019 | 3300025935 | Bacteria | 402225 |
| 91 | Ga0207669_10002106 | 3300025937 | Bacteria | 8436 |
| 92 | Ga0207704_10211274 | 3300025938 | Bacteria | 1428 |
| 93 | Ga0207711_10027706 | 3300025941 | Bacteria | 4761 |
| 94 | Ga0207689_10014268 | 3300025942 | Bacteria | 6761 |
| 95 | Ga0207679_10351920 | 3300025945 | Bacteria | 1284 |
| 96 | Ga0207658_10147350 | 3300025986 | Bacteria | 1913 |
| 97 | Ga0207658_10151684 | 3300025986 | Bacteria | 1889 |
| 98 | Ga0207648_10003244 | 3300026089 | Bacteria | 17114 |
| 99 | Ga0207648_10021691 | 3300026089 | Bacteria | 5771 |
| 100 | Ga0207674_10170625 | 3300026116 | Bacteria | 2129 |
| 101 | Ga0207683_10784978 | 3300026121 | Bacteria | 884 |
| 102 | Ga0207698_10323337 | 3300026142 | Bacteria | 1446 |
| 103 | Ga0209281_1000005 | 3300027111 | Bacteria | 1242284 |
| 104 | Ga0209389_1024054 | 3300027296 | Bacteria | 5356 |
| 105 | Ga0209371_1016014 | 3300027312 | Bacteria | 1992 |
| 106 | Ga0209371_1033416 | 3300027312 | Bacteria | 1098 |
| 107 | Ga0209970_1003105 | 3300027614 | Bacteria | 2803 |
| 108 | Ga0268266_10292292 | 3300028379 | Bacteria | 1518 |
| 109 | Ga0268264_10060515 | 3300028381 | Bacteria | 3174 |
| 110 | Ga0307515_10000020 | 3300028794 | Bacteria | 411735 |
| 111 | Ga0307515_10000053 | 3300028794 | Bacteria | 266512 |
| 112 | Ga0307515_10031150 | 3300028794 | Bacteria | 8906 |
| 113 | Ga0268256_1017782 | 3300030500 | Bacteria | 1992 |
| 114 | Ga0265328_10039894 | 3300031239 | Bacteria | 1731 |
| 115 | Ga0265331_10010417 | 3300031250 | Bacteria | 5146 |
| 116 | Ga0265327_10000355 | 3300031251 | Bacteria | 87181 |
| 117 | Ga0265327_10076625 | 3300031251 | Bacteria | 1662 |
| 118 | Ga0265316_10606942 | 3300031344 | Bacteria | 776 |
| 119 | Ga0307513_10022164 | 3300031456 | Bacteria | 7473 |
| 120 | Ga0307408_100000150 | 3300031548 | Bacteria | 77682 |
| 121 | Ga0307408_100000738 | 3300031548 | Bacteria | 26438 |
| 122 | Ga0307408_100253649 | 3300031548 | Bacteria | 1452 |
| 123 | Ga0307408_100477678 | 3300031548 | Bacteria | 1087 |
| 124 | Ga0316579_10006900 | 3300031691 | Bacteria | 4662 |
| 125 | Ga0316578_10026282 | 3300031728 | Bacteria | 3281 |
| 126 | Ga0316578_10111981 | 3300031728 | Bacteria | 1639 |
| 127 | Ga0307516_10007358 | 3300031730 | Bacteria | 12672 |
| 128 | Ga0307405_10044539 | 3300031731 | Bacteria | 2714 |
| 129 | Ga0316577_10009887 | 3300031733 | Bacteria | 5144 |
| 130 | Ga0307413_10031649 | 3300031824 | Bacteria | 2988 |
| 131 | Ga0307410_10010512 | 3300031852 | Bacteria | 5248 |
| 132 | Ga0307410_10191610 | 3300031852 | Bacteria | 1555 |
| 133 | Ga0307406_10000370 | 3300031901 | Bacteria | 26015 |
| 134 | Ga0307406_10014073 | 3300031901 | Bacteria | 4597 |
| 135 | Ga0307407_10026051 | 3300031903 | Bacteria | 3092 |
| 136 | Ga0307412_10000313 | 3300031911 | Bacteria | 30726 |
| 137 | Ga0307416_100092522 | 3300032002 | Bacteria | 2601 |
| 138 | Ga0307416_100219935 | 3300032002 | Bacteria | 1820 |
| 139 | Ga0307414_10021468 | 3300032004 | Bacteria | 4053 |
| 140 | Ga0307411_10022948 | 3300032005 | Bacteria | 3685 |
| 141 | Ga0307411_10698930 | 3300032005 | Bacteria | 883 |
| 142 | Ga0316583_10016232 | 3300032133 | Bacteria | 2680 |
| 143 | Ga0316585_10001234 | 3300032137 | Bacteria | 6693 |
| 144 | Ga0316585_10014706 | 3300032137 | Bacteria | 2342 |
| 145 | Ga0316580_10006510 | 3300032139 | Bacteria | 3453 |
| 146 | Ga0373958_0014688 | 3300034819 | Bacteria | 1372 |
| 147 | Ga0373939_0000620 | 3300035114 | Bacteria | 8811 |
| 148 | Ga0373960_0004076 | 3300035121 | Bacteria | 3338 |
| 149 | Ga0373961_0011098 | 3300035241 | Bacteria | 2232 |
| 150 | Ga0373962_0018100 | 3300035242 | Bacteria | 1830 |
| 151 | Ga0316574_0022945 | 3300035398 | Bacteria | 3721 |
| 152 | Ga0316574_0326533 | 3300035398 | Bacteria | 973 |
| 153 | Ga0373927_0336097 | 3300035695 | Bacteria | 995 |
| 154 | Ga0316582_0010261 | 3300036647 | Bacteria | 5122 |
| 155 | Ga0316582_0048994 | 3300036647 | Bacteria | 2672 |
| 156 | Ga0316582_0072253 | 3300036647 | Bacteria | 2236 |
| 157 | Ga0316582_0179911 | 3300036647 | Bacteria | 1438 |
| 158 | Ga0316582_0187722 | 3300036647 | Bacteria | 1407 |
| 159 | Ga0316584_0051864 | 3300036712 | Bacteria | 3068 |
| 160 | Ga0316584_0232583 | 3300036712 | Bacteria | 1351 |
| 161 | Ga0316584_0254795 | 3300036712 | Bacteria | 1281 |
| 162 | Ga0373925_0029184 | 3300037068 | Bacteria | 4046 |
| 163 | Ga0395905_0089826 | 3300037471 | Bacteria | 2879 |
| 164 | Ga0395905_0260987 | 3300037471 | Bacteria | 1617 |
| 165 | Ga0436361_0001725 | 3300039447 | Bacteria | 1103 |
| 166 | Ga0436361_0010737 | 3300039447 | Bacteria | 3021 |
| 167 | Ga0436361_0072850 | 3300039447 | Bacteria | 9290 |
| 168 | Ga0436361_0167979 | 3300039447 | Bacteria | 86419 |
| 169 | Ga0436361_0217332 | 3300039447 | Bacteria | 23737 |
| 170 | Ga0436361_0236342 | 3300039447 | Bacteria | 16847 |
| 171 | Ga0436361_0359670 | 3300039447 | Bacteria | 47250 |
| 172 | Ga0436361_0466394 | 3300039447 | Bacteria | 5236 |
| 173 | Ga0436361_0679893 | 3300039447 | Bacteria | 2794 |
| 174 | Ga0436361_0955215 | 3300039447 | Bacteria | 1132 |
| 175 | Ga0451843_1714227 | 3300041509 | Bacteria | 1227 |
| 176 | Ga0451853_1452335 | 3300041512 | Bacteria | 1195 |
| 177 | Ga0451853_3037353 | 3300041512 | Bacteria | 1020 |
| 178 | Ga0439431_0005984 | 3300041997 | Bacteria | 2684 |
| 179 | Ga0450917_000776 | 3300042120 | Bacteria | 2353 |
| 180 | Ga0450894_013601 | 3300042131 | Bacteria | 1070 |
| 181 | Ga0450898_003079 | 3300042134 | Bacteria | 2367 |
| 182 | Ga0451577_0766355 | 3300042876 | Bacteria | 872 |
| 183 | Ga0453683_0040165 | 3300044673 | Bacteria | 2938 |
| 184 | Ga0453684_0024040 | 3300044712 | Bacteria | 8932 |
| 185 | Ga0453684_0025201 | 3300044712 | Bacteria | 8646 |
| 186 | Ga0453684_0032350 | 3300044712 | Bacteria | 7323 |
| 187 | Ga0451576_0000798 | 3300045051 | Bacteria | 61660 |
| 188 | Ga0451576_0004366 | 3300045051 | Bacteria | 18441 |
| 189 | Ga0451576_0570132 | 3300045051 | Bacteria | 1189 |
| 190 | Ga0451576_1229894 | 3300045051 | Bacteria | 782 |
| 191 | Ga0495642_0063078 | 3300046528 | Bacteria | 1540 |
| 192 | Ga0495597_0000613 | 3300046542 | Bacteria | 29235 |
| 193 | Ga0495633_0002503 | 3300046558 | Bacteria | 12924 |
| 194 | Ga0495633_0233385 | 3300046558 | Bacteria | 841 |
| 195 | Ga0495656_0023401 | 3300046615 | Bacteria | 2431 |
| 196 | Ga0495669_0303625 | 3300046684 | Bacteria | 770 |
| 197 | Ga0495624_0331678 | 3300046690 | Bacteria | 916 |
| 198 | Ga0496101_0744759 | 3300048904 | Bacteria | 773 |
| 199 | Ga0496104_0036195 | 3300048907 | Bacteria | 4613 |
| 200 | Ga0496105_0025208 | 3300048908 | Bacteria | 4838 |
| 201 | Ga0496108_0022894 | 3300048911 | Bacteria | 5140 |
| 202 | Ga0496109_0037954 | 3300048912 | Bacteria | 4353 |
| 203 | Ga0496110_0421710 | 3300048913 | Bacteria | 1216 |
| 204 | Ga0496113_0478990 | 3300048916 | Bacteria | 1000 |
| 205 | Ga0496122_0003613 | 3300048925 | Bacteria | 20138 |
| 206 | Ga0496122_0225480 | 3300048925 | Bacteria | 1071 |
| 207 | Ga0496123_0025926 | 3300048926 | Bacteria | 4406 |
| 208 | Ga0496123_0103025 | 3300048926 | Bacteria | 1655 |
| 209 | Ga0496125_0000135 | 3300048928 | Bacteria | 160987 |
| 210 | Ga0501037_0504318 | 3300049573 | Bacteria | 821 |
| 211 | Ga0501222_000386 | 3300049662 | Bacteria | 6737 |
| 212 | Ga0501233_009170 | 3300049668 | Bacteria | 1925 |
| 213 | Ga0501267_001777 | 3300049764 | Bacteria | 1882 |
| 214 | Ga0501035_0085248 | 3300049822 | Bacteria | 2785 |
| 215 | nmdc:mga00v17_740_c2 | 3300050491 | Bacteria | 17350 |
| 216 | nmdc:mga0k408_137114_c1 | 3300050493 | Bacteria | 1454 |
| 217 | nmdc:mga0k408_5310_c2 | 3300050493 | Bacteria | 3455 |
| 218 | nmdc:mga0k408_71356_c1 | 3300050493 | Bacteria | 2027 |
| 219 | nmdc:mga07m45_1438_c1 | 3300050496 | Bacteria | 10919 |
| 220 | nmdc:mga07m45_222_c1 | 3300050496 | Bacteria | 22600 |
| 221 | Ga0500622_0001554 | 3300053156 | Bacteria | 18138 |
| 222 | 2932423594 | 2932422444 | Bacteria | 4678430 |
| 223 | 2548498367 | 2547132374 | Bacteria | 5530232 |
| 224 | 2643867640 | 2643221570 | Bacteria | 5103772 |
| 225 | 2643990558 | 2643221596 | Bacteria | 5006805 |
| 226 | 2644058685 | 2643221609 | Bacteria | 6756331 |
| 227 | 2644070510 | 2643221611 | Bacteria | 6820941 |
| 228 | 2644221352 | 2643221639 | Bacteria | 6649903 |
| 229 | 2644257890 | 2643221646 | Bacteria | 6433402 |
| 230 | 2644294924 | 2643221652 | Bacteria | 5140275 |
| 231 | 2644648906 | 2643221717 | Bacteria | 5676132 |
| 232 | 2722884537 | 2721755523 | Bacteria | 6430384 |
| 233 | 2739057857 | 2738541337 | Bacteria | 6183410 |
| 234 | 2739243854 | 2738543012 | Bacteria | 7115078 |
| 235 | 2816472688 | 2816332133 | Bacteria | 7249298 |
| 236 | 2831870079 | 2831864461 | Bacteria | 6502356 |
| 237 | 2839143134 | 2839138175 | Bacteria | 6549354 |
| 238 | 2842720219 | 2842718218 | Bacteria | 4560148 |
| 239 | 2857538498 | 2857537821 | Bacteria | 5248181 |
| 240 | 2858955770 | 2858950400 | Bacteria | 6783797 |
| 241 | 2886852126 | 2886848708 | Bacteria | 5632523 |
| 242 | 2894026614 | 2894023352 | Bacteria | 5167372 |
| 243 | 2919704674 | 2919704043 | Bacteria | 5560311 |
| 244 | 2974322802 | 2974320154 | Bacteria | 4571377 |
| 245 | 2990713048 | 2990710928 | Bacteria | 5002431 |
| 246 | rootL2_10008667 | |||
| 247 | Ga0055525_1000011 | |||
| 248 | Ga0055526_1001023 | |||
| 249 | Ga0055524_1008226 | |||
| 250 | Ga0055524_1024287 | |||
| 251 | Ga0055531_10000078 | |||
| 252 | Ga0055531_10011352 | |||
| 253 | Ga0055531_10011505 | |||
| 254 | Ga0055543_1004332 | |||
| 255 | Ga0055543_1005274 | |||
| 256 | Ga0065165_1000613 | |||
| 257 | Ga0065165_1000652 | |||
| 258 | Ga0070676_10003923 | |||
| 259 | Ga0070690_100239575 | |||
| 260 | Ga0068869_100011586 | |||
| 261 | Ga0070666_10003688 | |||
| 262 | Ga0070666_10186579 | |||
| 263 | Ga0070689_100295090 | |||
| 264 | Ga0070671_100067692 | |||
| 265 | Ga0070674_100002137 | |||
| 266 | Ga0070673_100004218 | |||
| 267 | Ga0070673_100459699 | |||
| 268 | Ga0070678_100828311 | |||
| 269 | Ga0068867_100010602 | |||
| 270 | Ga0070665_100083198 | |||
| 271 | Ga0068856_100072520 | |||
| 272 | Ga0068859_100644258 | |||
| 273 | Ga0068864_100043400 | |||
| 274 | Ga0068870_10020325 | |||
| 275 | Ga0068863_100054750 | |||
| 276 | Ga0068858_101075128 | |||
| 277 | Ga0068860_100061830 | |||
| 278 | Ga0075364_10002308 | |||
| 279 | Ga0075366_10013243 | |||
| 280 | Ga0075366_10156802 | |||
| 281 | Ga0075366_10179763 | |||
| 282 | Ga0097621_100149183 | |||
| 283 | Ga0075370_10003217 | |||
| 284 | Ga0075370_10058982 | |||
| 285 | Ga0068865_100120843 | |||
| 286 | Ga0097620_100644286 | |||
| 287 | Ga0099823_1013693 | |||
| 288 | Ga0079104_1000004 | |||
| 289 | Ga0105250_10007156 | |||
| 290 | Ga0105245_10026614 | |||
| 291 | Ga0105245_10138955 | |||
| 292 | Ga0105243_10001592 | |||
| 293 | Ga0105242_10001169 | |||
| 294 | Ga0105242_10778307 | |||
| 295 | Ga0105238_10157766 | |||
| 296 | Ga0105238_11230247 | |||
| 297 | Ga0157319_1000006 | |||
| 298 | Ga0157378_10030728 | |||
| 299 | Ga0163162_10034096 | |||
| 300 | Ga0157375_10193530 | |||
| 301 | Ga0157375_10347821 | |||
| 302 | Ga0163163_10097563 | |||
| 303 | Ga0157376_10013474 | |||
| 304 | Ga0163161_10019942 | |||
| 305 | Ga0213872_10000011 | |||
| 306 | Ga0213872_10000013 | |||
| 307 | Ga0213872_10000043 | |||
| 308 | Ga0213872_10000172 | |||
| 309 | Ga0213872_10003732 | |||
| 310 | Ga0213872_10024566 | |||
| 311 | Ga0213872_10028082 | |||
| 312 | Ga0213872_10055851 | |||
| 313 | Ga0209563_100005 | |||
| 314 | Ga0209673_1004857 | |||
| 315 | Ga0209564_1000003 | |||
| 316 | Ga0209050_1002123 | |||
| 317 | Ga0209050_1004287 | |||
| 318 | Ga0209256_1001979 | |||
| 319 | Ga0209256_1005905 | |||
| 320 | Ga0209051_1003875 | |||
| 321 | Ga0209051_1004008 | |||
| 322 | Ga0209257_1000032 | |||
| 323 | Ga0209257_1002360 | |||
| 324 | Ga0209257_1009881 | |||
| 325 | Ga0207680_10059259 | |||
| 326 | Ga0207645_10007379 | |||
| 327 | Ga0207643_10025252 | |||
| 328 | Ga0207649_10649400 | |||
| 329 | Ga0207687_10138603 | |||
| 330 | Ga0207644_10010837 | |||
| 331 | Ga0207644_10123654 | |||
| 332 | Ga0207644_10738706 | |||
| 333 | Ga0207686_10005429 | |||
| 334 | Ga0207686_10157230 | |||
| 335 | Ga0207709_10000019 | |||
| 336 | Ga0207669_10002106 | |||
| 337 | Ga0207704_10211274 | |||
| 338 | Ga0207711_10027706 | |||
| 339 | Ga0207689_10014268 | |||
| 340 | Ga0207679_10351920 | |||
| 341 | Ga0207658_10147350 | |||
| 342 | Ga0207658_10151684 | |||
| 343 | Ga0207648_10003244 | |||
| 344 | Ga0207648_10021691 | |||
| 345 | Ga0207674_10170625 | |||
| 346 | Ga0207683_10784978 | |||
| 347 | Ga0207698_10323337 | |||
| 348 | Ga0209281_1000005 | |||
| 349 | Ga0209389_1024054 | |||
| 350 | Ga0209371_1016014 | |||
| 351 | Ga0209371_1033416 | |||
| 352 | Ga0209970_1003105 | |||
| 353 | Ga0268266_10292292 | |||
| 354 | Ga0268264_10060515 | |||
| 355 | Ga0307515_10000020 | |||
| 356 | Ga0307515_10000053 | |||
| 357 | Ga0307515_10031150 | |||
| 358 | Ga0268256_1017782 | |||
| 359 | Ga0265328_10039894 | |||
| 360 | Ga0265331_10010417 | |||
| 361 | Ga0265327_10000355 | |||
| 362 | Ga0265327_10076625 | |||
| 363 | Ga0265316_10606942 | |||
| 364 | Ga0307513_10022164 | |||
| 365 | Ga0307408_100000150 | |||
| 366 | Ga0307408_100000738 | |||
| 367 | Ga0307408_100253649 | |||
| 368 | Ga0307408_100477678 | |||
| 369 | Ga0316579_10006900 | |||
| 370 | Ga0316578_10026282 | |||
| 371 | Ga0316578_10111981 | |||
| 372 | Ga0307516_10007358 | |||
| 373 | Ga0307405_10044539 | |||
| 374 | Ga0316577_10009887 | |||
| 375 | Ga0307413_10031649 | |||
| 376 | Ga0307410_10010512 | |||
| 377 | Ga0307410_10191610 | |||
| 378 | Ga0307406_10000370 | |||
| 379 | Ga0307406_10014073 | |||
| 380 | Ga0307407_10026051 | |||
| 381 | Ga0307412_10000313 | |||
| 382 | Ga0307416_100092522 | |||
| 383 | Ga0307416_100219935 | |||
| 384 | Ga0307414_10021468 | |||
| 385 | Ga0307411_10022948 | |||
| 386 | Ga0307411_10698930 | |||
| 387 | Ga0316583_10016232 | |||
| 388 | Ga0316585_10001234 | |||
| 389 | Ga0316585_10014706 | |||
| 390 | Ga0316580_10006510 | |||
| 391 | Ga0373958_0014688 | |||
| 392 | Ga0373939_0000620 | |||
| 393 | Ga0373960_0004076 | |||
| 394 | Ga0373961_0011098 | |||
| 395 | Ga0373962_0018100 | |||
| 396 | Ga0316574_0022945 | |||
| 397 | Ga0316574_0326533 | |||
| 398 | Ga0373927_0336097 | |||
| 399 | Ga0316582_0010261 | |||
| 400 | Ga0316582_0048994 | |||
| 401 | Ga0316582_0072253 | |||
| 402 | Ga0316582_0179911 | |||
| 403 | Ga0316582_0187722 | |||
| 404 | Ga0316584_0051864 | |||
| 405 | Ga0316584_0232583 | |||
| 406 | Ga0316584_0254795 | |||
| 407 | Ga0373925_0029184 | |||
| 408 | Ga0395905_0089826 | |||
| 409 | Ga0395905_0260987 | |||
| 410 | Ga0436361_0001725 | |||
| 411 | Ga0436361_0010737 | |||
| 412 | Ga0436361_0072850 | |||
| 413 | Ga0436361_0167979 | |||
| 414 | Ga0436361_0217332 | |||
| 415 | Ga0436361_0236342 | |||
| 416 | Ga0436361_0359670 | |||
| 417 | Ga0436361_0466394 | |||
| 418 | Ga0436361_0679893 | |||
| 419 | Ga0436361_0955215 | |||
| 420 | Ga0451843_1714227 | |||
| 421 | Ga0451853_1452335 | |||
| 422 | Ga0451853_3037353 | |||
| 423 | Ga0439431_0005984 | |||
| 424 | Ga0450917_000776 | |||
| 425 | Ga0450894_013601 | |||
| 426 | Ga0450898_003079 | |||
| 427 | Ga0451577_0766355 | |||
| 428 | Ga0453683_0040165 | |||
| 429 | Ga0453684_0024040 | |||
| 430 | Ga0453684_0025201 | |||
| 431 | Ga0453684_0032350 | |||
| 432 | Ga0451576_0000798 | |||
| 433 | Ga0451576_0004366 | |||
| 434 | Ga0451576_0570132 | |||
| 435 | Ga0451576_1229894 | |||
| 436 | Ga0495642_0063078 | |||
| 437 | Ga0495597_0000613 | |||
| 438 | Ga0495633_0002503 | |||
| 439 | Ga0495633_0233385 | |||
| 440 | Ga0495656_0023401 | |||
| 441 | Ga0495669_0303625 | |||
| 442 | Ga0495624_0331678 | |||
| 443 | Ga0496101_0744759 | |||
| 444 | Ga0496104_0036195 | |||
| 445 | Ga0496105_0025208 | |||
| 446 | Ga0496108_0022894 | |||
| 447 | Ga0496109_0037954 | |||
| 448 | Ga0496110_0421710 | |||
| 449 | Ga0496113_0478990 | |||
| 450 | Ga0496122_0003613 | |||
| 451 | Ga0496122_0225480 | |||
| 452 | Ga0496123_0025926 | |||
| 453 | Ga0496123_0103025 | |||
| 454 | Ga0496125_0000135 | |||
| 455 | Ga0501037_0504318 | |||
| 456 | Ga0501222_000386 | |||
| 457 | Ga0501233_009170 | |||
| 458 | Ga0501267_001777 | |||
| 459 | Ga0501035_0085248 | |||
| 460 | nmdc:mga00v17_740_c2 | |||
| 461 | nmdc:mga0k408_137114_c1 | |||
| 462 | nmdc:mga0k408_5310_c2 | |||
| 463 | nmdc:mga0k408_71356_c1 | |||
| 464 | nmdc:mga07m45_1438_c1 | |||
| 465 | nmdc:mga07m45_222_c1 | |||
| 466 | Ga0500622_0001554 | |||
| 467 | 2932423594 | |||
| 468 | 2548498367 | |||
| 469 | 2643867640 | |||
| 470 | 2643990558 | |||
| 471 | 2644058685 | |||
| 472 | 2644070510 | |||
| 473 | 2644221352 | |||
| 474 | 2644257890 | |||
| 475 | 2644294924 | |||
| 476 | 2644648906 | |||
| 477 | 2722884537 | |||
| 478 | 2739057857 | |||
| 479 | 2739243854 | |||
| 480 | 2816472688 | |||
| 481 | 2831870079 | |||
| 482 | 2839143134 | |||
| 483 | 2842720219 | |||
| 484 | 2857538498 | |||
| 485 | 2858955770 | |||
| 486 | 2886852126 | |||
| 487 | 2894026614 | |||
| 488 | 2919704674 | |||
| 489 | 2974322802 | |||
| 490 | 2990713048 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2abk-assembly1.cif.gz_A | refinement of the native structure of endonuclease iii to a resolution of 1.85 angstrom | 0.9866 | 1 | 204 |
| 2abk-assembly1.cif.gz_A | refinement of the native structure of endonuclease iii to a resolution of 1.85 angstrom | 0.9498 | 1 | 204 |
| 1p59-assembly1.cif.gz_A | structure of a non-covalent endonuclease iii-dna complex | 0.9203 | 1 | 206 |
| 1orp-assembly1.cif.gz_A | structure of a trapped endonuclease iii-dna covalent intermediate: estranged-adenine complex | 0.9177 | 1 | 206 |
| 1p59-assembly1.cif.gz_A | structure of a non-covalent endonuclease iii-dna complex | 0.8918 | 1 | 206 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0AB83_21_132_1.10.340.30 | Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 | 1.001 | 21 | 132 | 1.10.340.30 |
| af_P0AB83_133_208_1.10.1670.10 | Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.9955 | 134 | 204 | 1.10.1670.10 |
| af_P0AB83_21_132_1.10.340.30 | Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 | 0.9923 | 21 | 132 | 1.10.340.30 |
| 2abkA02 | Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.9884 | 133 | 204 | 1.10.1670.10 |
| af_C6KSY9_237_342_1.10.340.30 | Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 | 0.9748 | 29 | 126 | 1.10.340.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4S3KNH9-F1-model_v4 | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase) | 0.9994 | 1 | 203 |
GO:0003677
GO:0004519 GO:0006285 GO:0019104 GO:0046872 GO:0051539 GO:0140078 |
| AF-A0A259BEE0-F1-model_v4 | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase) | 0.9991 | 1 | 204 |
GO:0003677
GO:0004519 GO:0006285 GO:0019104 GO:0046872 GO:0051539 GO:0140078 |
| AF-A0A4V3UU74-F1-model_v4 | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase) | 0.9987 | 1 | 204 |
GO:0003677
GO:0004519 GO:0006285 GO:0019104 GO:0046872 GO:0051539 GO:0140078 |
| AF-A0A2U8H7U5-F1-model_v4 | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase) | 0.9984 | 1 | 204 |
GO:0003677
GO:0004519 GO:0006285 GO:0019104 GO:0046872 GO:0051539 GO:0140078 |
| AF-A0A0W1RV73-F1-model_v4 | Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase) | 0.9984 | 1 | 204 |
GO:0003677
GO:0004519 GO:0006285 GO:0019104 GO:0046872 GO:0051539 GO:0140078 |