F358169

General Info

Members Datasets Scaffolds Average Seq Length
246 159 245 276

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10267037|Ga0157378_102670372
Length 322
Sequence VNGERQWRDTVSSVIDRLHSLCDVTNRVEYPLHRLRKAIERQEGSTLHTGCIHTSDYLKRIGVPDIAAATSPFDPGYDPSTLASHLQQSAHLMSTLKISMACWMVANESATRMKIAMARAHGVPTVTGGGPFEIAVAQGELPAYLDLCADVGVTRIECGQGFTDSELHPRDIVAAAHSRGLDVQMELGKKHDGGFSDRTLAAWIDQGKEWLDAGAVQLVVEARESAQGVGLFDQDGHLNTAYAERFVRAFGFDTVIFEAPNKPSQFALLNHFGRDVHLCNVRLEELLRVEIYRRGLHSDAFGHTNLRPAAPEVFAIQTGGNP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
86 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
89 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
90 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
126 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
127 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
128 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
129 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
130 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
131 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
132 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
133 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
144 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
145 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
146 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
157 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
158 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.75
Metatranscriptomes 2.85
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.41
Rhizoplane 1.63
Rhizosphere 96.75
Stem 0
Stem Tuber 0
Unclassified 1.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1647996 2162886007 Bacteria 6934
2 Ga0058862_10068974 3300004803 Unclassified 3002
3 Ga0065704_10002853 3300005289 Bacteria 9604
4 Ga0065715_10107969 3300005293 Bacteria 2743
5 Ga0065707_10087557 3300005295 Bacteria 4981
6 Ga0070690_100023323 3300005330 Bacteria 3795
7 Ga0070690_100440763 3300005330 Bacteria 964
8 Ga0070666_10004214 3300005335 Bacteria 8731
9 Ga0068868_100126313 3300005338 Unclassified 2090
10 Ga0068868_100183953 3300005338 Bacteria 1735
11 Ga0070689_100026660 3300005340 Unclassified 4353
12 Ga0070661_100095783 3300005344 Unclassified 2202
13 Ga0070661_100114452 3300005344 Bacteria 2016
14 Ga0070692_10020509 3300005345 Bacteria 3205
15 Ga0070669_100006326 3300005353 Bacteria 8538
16 Ga0070675_100349443 3300005354 Bacteria 1311
17 Ga0070671_100080644 3300005355 Bacteria 2721
18 Ga0070673_100119626 3300005364 Bacteria 2195
19 Ga0070673_100364980 3300005364 Bacteria 1284
20 Ga0070688_100032416 3300005365 Bacteria 3150
21 Ga0070659_100057974 3300005366 Bacteria 3055
22 Ga0070709_10071592 3300005434 Bacteria 2239
23 Ga0070714_100025751 3300005435 Bacteria 4858
24 Ga0070713_100146291 3300005436 Bacteria 2098
25 Ga0070705_100028331 3300005440 Bacteria 3067
26 Ga0070705_100156544 3300005440 Bacteria 1518
27 Ga0070700_100004410 3300005441 Bacteria 7351
28 Ga0070694_100015582 3300005444 Bacteria 4777
29 Ga0070694_100319703 3300005444 Unclassified 1194
30 Ga0070662_100014872 3300005457 Bacteria 5204
31 Ga0070681_10000864 3300005458 Bacteria 25499
32 Ga0068867_100006248 3300005459 Bacteria 8426
33 Ga0070706_100004855 3300005467 Bacteria 12876
34 Ga0070707_100002618 3300005468 Bacteria 17104
35 Ga0070707_100265606 3300005468 Bacteria 1669
36 Ga0070698_100083704 3300005471 Bacteria 3179
37 Ga0070698_100091057 3300005471 Bacteria 3033
38 Ga0070699_100001573 3300005518 Bacteria 20875
39 Ga0070699_100004316 3300005518 Bacteria 12570
40 Ga0070699_100357648 3300005518 Bacteria 1316
41 Ga0070699_100401551 3300005518 Bacteria 1239
42 Ga0070679_100028847 3300005530 Bacteria 5474
43 Ga0070697_100042596 3300005536 Bacteria 3674
44 Ga0070697_100322767 3300005536 Unclassified 1330
45 Ga0070672_100013234 3300005543 Bacteria 5818
46 Ga0070672_100358765 3300005543 Bacteria 1244
47 Ga0070686_100139079 3300005544 Bacteria 1688
48 Ga0070686_100250370 3300005544 Bacteria 1294
49 Ga0070696_100029063 3300005546 Bacteria 3774
50 Ga0070693_100225983 3300005547 Unclassified 1229
51 Ga0070704_100001721 3300005549 Bacteria 11934
52 Ga0068855_100097869 3300005563 Unclassified 3380
53 Ga0068857_100045477 3300005577 Bacteria 3895
54 Ga0068857_100103891 3300005577 Bacteria 2551
55 Ga0068859_100000637 3300005617 Bacteria 35037
56 Ga0068859_100265315 3300005617 Bacteria 1809
57 Ga0068864_100028384 3300005618 Bacteria 4729
58 Ga0068861_100002665 3300005719 Bacteria 11684
59 Ga0068870_10008471 3300005840 Bacteria 4628
60 Ga0068870_10056975 3300005840 Bacteria 2088
61 Ga0068863_100031920 3300005841 Bacteria 5024
62 Ga0068858_100075756 3300005842 Bacteria 3125
63 Ga0068858_100120720 3300005842 Bacteria 2451
64 Ga0068860_100001818 3300005843 Bacteria 22707
65 Ga0068860_100118131 3300005843 Bacteria 2538
66 Ga0068860_100185982 3300005843 Bacteria 2009
67 Ga0068862_100004347 3300005844 Bacteria 11995
68 Ga0068862_100190326 3300005844 Bacteria 1846
69 Ga0081455_10102375 3300005937 Bacteria 2296
70 Ga0081539_10031082 3300005985 Unclassified 3299
71 Ga0070717_10002026 3300006028 Bacteria 14185
72 Ga0097621_100001170 3300006237 Bacteria 18151
73 Ga0097621_100054453 3300006237 Bacteria 3263
74 Ga0075428_100157648 3300006844 Bacteria 2465
75 Ga0075431_100302623 3300006847 Unclassified 1615
76 Ga0075433_10001139 3300006852 Bacteria 19258
77 Ga0075433_10060237 3300006852 Unclassified 3323
78 Ga0075434_100000126 3300006871 Bacteria 45504
79 Ga0075434_100017065 3300006871 Bacteria 6986
80 Ga0075434_100028030 3300006871 Bacteria 5531
81 Ga0075434_100055996 3300006871 Unclassified 3918
82 Ga0075434_100154369 3300006871 Bacteria 2315
83 Ga0075434_100223234 3300006871 Unclassified 1904
84 Ga0075434_100399076 3300006871 Unclassified 1396
85 Ga0075434_100509850 3300006871 Bacteria 1223
86 Ga0075434_100627689 3300006871 Unclassified 1093
87 Ga0075429_100100750 3300006880 Unclassified 2521
88 Ga0075436_100108850 3300006914 Bacteria 1933
89 Ga0097620_100000637 3300006931 Bacteria 35037
90 Ga0097620_100265326 3300006931 Bacteria 1809
91 Ga0075435_100008404 3300007076 Bacteria 7404
92 Ga0075435_100018896 3300007076 Bacteria 5252
93 Ga0075435_100023623 3300007076 Bacteria 4758
94 Ga0075435_100050616 3300007076 Unclassified 3344
95 Ga0099794_10000614 3300007265 Bacteria 11849
96 Ga0111539_10011670 3300009094 Bacteria 11021
97 Ga0105245_10000852 3300009098 Bacteria 27661
98 Ga0105247_10034584 3300009101 Bacteria 3077
99 Ga0114129_10030210 3300009147 Bacteria 7673
100 Ga0114129_10057442 3300009147 Bacteria 5445
101 Ga0114129_10480900 3300009147 Unclassified 1625
102 Ga0114129_10627239 3300009147 Unclassified 1390
103 Ga0105243_10042120 3300009148 Bacteria 3573
104 Ga0105241_10654011 3300009174 Unclassified 955
105 Ga0105242_10018284 3300009176 Bacteria 5477
106 Ga0105248_10000788 3300009177 Bacteria 35553
107 Ga0105249_10032163 3300009553 Unclassified 4745
108 Ga0105249_10293016 3300009553 Unclassified 1629
109 Ga0099796_10004762 3300010159 Bacteria 3317
110 Ga0105246_10083610 3300011119 Bacteria 2281
111 Ga0157370_10070561 3300013104 Unclassified 3298
112 Ga0157370_10367584 3300013104 Unclassified 1325
113 Ga0157369_10042261 3300013105 Unclassified 4973
114 Ga0157369_10144066 3300013105 Unclassified 2519
115 Ga0157374_10564121 3300013296 Bacteria 1147
116 Ga0157378_10267037 3300013297 Bacteria 1644
117 Ga0163162_10003636 3300013306 Bacteria 14778
118 Ga0163162_10014070 3300013306 Bacteria 7820
119 Ga0163162_10703979 3300013306 Unclassified 1132
120 Ga0157372_10033997 3300013307 Bacteria 5601
121 Ga0157375_10007605 3300013308 Bacteria 9479
122 Ga0163163_10008041 3300014325 Bacteria 9342
123 Ga0163163_10051685 3300014325 Unclassified 4051
124 Ga0157380_10011959 3300014326 Bacteria 6279
125 Ga0157380_10337173 3300014326 Bacteria 1405
126 Ga0182008_10115603 3300014497 Bacteria 1331
127 Ga0157379_10012418 3300014968 Bacteria 7438
128 Ga0157376_10001926 3300014969 Bacteria 13865
129 Ga0157376_10043957 3300014969 Bacteria 3669
130 Ga0206356_10096535 3300020070 Unclassified 1299
131 Ga0206356_10656542 3300020070 Unclassified 2500
132 Ga0206352_10507898 3300020078 Unclassified 2909
133 Ga0206354_10198382 3300020081 Unclassified 1391
134 Ga0206354_10416802 3300020081 Unclassified 1130
135 Ga0213876_10197477 3300021384 Archaea 1069
136 Ga0224712_10011212 3300022467 Unclassified 2772
137 Ga0207680_10001396 3300025903 Bacteria 11425
138 Ga0207680_10380291 3300025903 Unclassified 995
139 Ga0207647_10075416 3300025904 Unclassified 2030
140 Ga0207643_10005649 3300025908 Bacteria 6687
141 Ga0207643_10064800 3300025908 Bacteria 2092
142 Ga0207684_10000723 3300025910 Bacteria 38859
143 Ga0207684_10039765 3300025910 Unclassified 3987
144 Ga0207684_10084645 3300025910 Bacteria 2701
145 Ga0207707_10058718 3300025912 Unclassified 3348
146 Ga0207662_10007725 3300025918 Bacteria 5859
147 Ga0207649_10078004 3300025920 Unclassified 2136
148 Ga0207646_10017944 3300025922 Bacteria 6608
149 Ga0207646_10057989 3300025922 Bacteria 3459
150 Ga0207681_10003425 3300025923 Bacteria 9917
151 Ga0207650_10092883 3300025925 Bacteria 2309
152 Ga0207659_10164720 3300025926 Bacteria 1744
153 Ga0207687_10007300 3300025927 Bacteria 7291
154 Ga0207700_10273846 3300025928 Unclassified 1450
155 Ga0207700_10391893 3300025928 Bacteria 1216
156 Ga0207664_10004580 3300025929 Bacteria 9368
157 Ga0207706_10118956 3300025933 Bacteria 2323
158 Ga0207686_10014152 3300025934 Bacteria 4433
159 Ga0207686_10039800 3300025934 Bacteria 2854
160 Ga0207670_10068695 3300025936 Unclassified 2442
161 Ga0207669_10155493 3300025937 Bacteria 1608
162 Ga0207691_10023910 3300025940 Bacteria 5750
163 Ga0207691_10169109 3300025940 Unclassified 1915
164 Ga0207711_10003817 3300025941 Bacteria 12961
165 Ga0207667_10143629 3300025949 Unclassified 2457
166 Ga0207712_10103962 3300025961 Bacteria 2117
167 Ga0207668_10024435 3300025972 Unclassified 3900
168 Ga0207640_10063712 3300025981 Bacteria 2451
169 Ga0207658_10119495 3300025986 Bacteria 2098
170 Ga0207677_10026324 3300026023 Bacteria 3646
171 Ga0207703_10014451 3300026035 Bacteria 6156
172 Ga0207703_10110223 3300026035 Bacteria 2348
173 Ga0207708_10008149 3300026075 Bacteria 7761
174 Ga0207708_10093644 3300026075 Bacteria 2319
175 Ga0207648_10002160 3300026089 Bacteria 21368
176 Ga0207676_10002027 3300026095 Bacteria 14721
177 Ga0207674_10016344 3300026116 Bacteria 8129
178 Ga0207674_10115599 3300026116 Bacteria 2655
179 Ga0207675_100005431 3300026118 Bacteria 12212
180 Ga0207675_100660988 3300026118 Unclassified 1052
181 Ga0207428_10006089 3300027907 Bacteria 11155
182 Ga0268265_10000430 3300028380 Bacteria 44554
183 Ga0268264_10019375 3300028381 Bacteria 5561
184 Ga0268264_10099156 3300028381 Bacteria 2528
185 Ga0268264_10391962 3300028381 Bacteria 1332
186 Ga0265338_10295091 3300028800 Bacteria 1180
187 Ga0265325_10007834 3300031241 Bacteria 6358
188 Ga0373926_0065858 3300035083 Unclassified 1326
189 Ga0373961_0024570 3300035241 Unclassified 1631
190 Ga0373931_0130878 3300035691 Bacteria 1444
191 Ga0373935_0080124 3300035692 Bacteria 2121
192 Ga0373935_0274752 3300035692 Unclassified 1185
193 Ga0373927_0000042 3300035695 Bacteria 94293
194 Ga0373927_0025498 3300035695 Bacteria 3866
195 Ga0373947_0002757 3300035725 Bacteria 10513
196 Ga0373947_0096278 3300035725 Bacteria 1853
197 Ga0373947_0114798 3300035725 Unclassified 1706
198 Ga0373925_0063687 3300037068 Bacteria 2775
199 Ga0373925_0065760 3300037068 Bacteria 2732
200 Ga0373925_0069036 3300037068 Unclassified 2669
201 Ga0395900_0029556 3300037418 Bacteria 5622
202 Ga0395900_0215647 3300037418 Unclassified 1937
203 Ga0395898_0555604 3300037466 Unclassified 1090
204 Ga0436364_1410238 3300037853 Bacteria 6184
205 Ga0436365_1040418 3300039437 Bacteria 2243
206 Ga0451576_0034317 3300045051 Bacteria 5390
207 Ga0451576_0100029 3300045051 Bacteria 3016
208 Ga0451576_0369322 3300045051 Unclassified 1503
209 Ga0466958_0318161 3300045836 Bacteria 1000
210 Ga0466967_0029825 3300045976 Unclassified 4570
211 Ga0495580_0058282 3300046472 Bacteria 2716
212 Ga0495580_0204160 3300046472 Unclassified 1361
213 Ga0495582_0099363 3300046473 Unclassified 1628
214 Ga0495659_0021210 3300046664 Bacteria 2188
215 Ga0495659_0024597 3300046664 Bacteria 2055
216 Ga0495659_0027646 3300046664 Unclassified 1958
217 Ga0495669_0049300 3300046684 Bacteria 1885
218 Ga0495636_0012605 3300047318 Bacteria 3348
219 Ga0495676_0119736 3300047321 Bacteria 1917
220 Ga0495684_0145865 3300047471 Bacteria 1773
221 Ga0495602_0409654 3300048088 Unclassified 965
222 Ga0496109_0042764 3300048912 Unclassified 4106
223 Ga0496111_0025792 3300048914 Unclassified 4148
224 Ga0496112_0237957 3300048915 Unclassified 1774
225 Ga0496113_0100806 3300048916 Unclassified 2238
226 nmdc:mga05p37_120316_c1 3300050507 Bacteria 3226
227 nmdc:mga06r32_319730_c1 3300050510 Unclassified 1537
228 nmdc:mga08y16_2241_c1 3300050511 Bacteria 19824
229 nmdc:mga0n895_1046_c1 3300050512 Bacteria 20148
230 nmdc:mga0n895_165797_c1 3300050512 Bacteria 2241
231 nmdc:mga0n895_214205_c1 3300050512 Unclassified 1956
232 nmdc:mga0n895_25761_c1 3300050512 Bacteria 5561
233 nmdc:mga0n895_44497_c1 3300050512 Bacteria 4329
234 nmdc:mga0n895_462898_c1 3300050512 Unclassified 1280
235 nmdc:mga0n895_486801_c1 3300050512 Bacteria 1244
236 nmdc:mga0rr50_19516_c1 3300050513 Bacteria 4578
237 nmdc:mga0rr50_289681_c1 3300050513 Unclassified 1368
238 nmdc:mga0rr50_316654_c1 3300050513 Bacteria 1307
239 nmdc:mga0rr50_68859_c1 3300050513 Unclassified 2692
240 nmdc:mga0rr50_9013_c1 3300050513 Bacteria 6242
241 nmdc:mga0rr50_97718_c1 3300050513 Bacteria 2300
242 nmdc:mga08x19_68699_c1 3300050514 Bacteria 2306
243 nmdc:mga0a205_227173_c1 3300050515 Bacteria 1751
244 nmdc:mga0a205_43510_c1 3300050515 Bacteria 4330
245 nmdc:mga0a205_656564_c1 3300050515 Unclassified 900

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005335 Ga0070666_10004214 Ga0070666_100042144 247
2 3300005338 Ga0068868_100183953 Ga0068868_1001839531 247
3 3300005617 Ga0068859_100265315 Ga0068859_1002653152 247
4 3300005842 Ga0068858_100075756 Ga0068858_1000757563 247
5 3300005843 Ga0068860_100001818 Ga0068860_10000181810 247
6 3300006237 Ga0097621_100001170 Ga0097621_1000011703 247
7 3300006931 Ga0097620_100265326 Ga0097620_1002653262 247
8 3300009098 Ga0105245_10000852 Ga0105245_1000085213 247
9 3300009101 Ga0105247_10034584 Ga0105247_100345843 247
10 3300009177 Ga0105248_10000788 Ga0105248_100007887 247
11 3300013296 Ga0157374_10564121 Ga0157374_105641211 247
12 3300013306 Ga0163162_10003636 Ga0163162_100036365 247
13 3300014325 Ga0163163_10008041 Ga0163163_100080418 247
14 3300014968 Ga0157379_10012418 Ga0157379_100124182 247
15 3300014969 Ga0157376_10001926 Ga0157376_100019263 247
16 3300025903 Ga0207680_10001396 Ga0207680_100013966 247
17 3300025927 Ga0207687_10007300 Ga0207687_100073002 247
18 3300025934 Ga0207686_10014152 Ga0207686_100141523 247
19 3300025941 Ga0207711_10003817 Ga0207711_100038176 247
20 3300025986 Ga0207658_10119495 Ga0207658_101194951 247
21 3300026023 Ga0207677_10026324 Ga0207677_100263244 247
22 3300026035 Ga0207703_10014451 Ga0207703_100144514 247
23 3300028381 Ga0268264_10019375 Ga0268264_100193753 247
24 3300005468 Ga0070707_100002618 Ga0070707_1000026186 251
25 3300005536 Ga0070697_100322767 Ga0070697_1003227672 251
26 3300006871 Ga0075434_100154369 Ga0075434_1001543692 251
27 3300025922 Ga0207646_10017944 Ga0207646_100179445 251
28 3300050512 nmdc:mga0n895_165797_c1 nmdc:mga0n895_165797_c1_893_1708 251
29 3300005330 Ga0070690_100440763 Ga0070690_1004407631 255
30 3300005440 Ga0070705_100156544 Ga0070705_1001565441 255
31 3300005444 Ga0070694_100319703 Ga0070694_1003197031 255
32 3300005518 Ga0070699_100357648 Ga0070699_1003576481 255
33 3300005518 Ga0070699_100401551 Ga0070699_1004015512 255
34 3300005544 Ga0070686_100139079 Ga0070686_1001390791 255
35 3300005544 Ga0070686_100250370 Ga0070686_1002503701 255
36 3300005546 Ga0070696_100029063 Ga0070696_1000290634 255
37 3300005985 Ga0081539_10031082 Ga0081539_100310822 255
38 3300006847 Ga0075431_100302623 Ga0075431_1003026232 255
39 3300006852 Ga0075433_10060237 Ga0075433_100602373 255
40 3300006871 Ga0075434_100055996 Ga0075434_1000559964 255
41 3300007076 Ga0075435_100050616 Ga0075435_1000506162 255
42 3300007265 Ga0099794_10000614 Ga0099794_100006142 255
43 3300021384 Ga0213876_10197477 Ga0213876_101974772 255
44 3300025929 Ga0207664_10004580 Ga0207664_100045803 255
45 3300026118 Ga0207675_100660988 Ga0207675_1006609881 255
46 3300035695 Ga0373927_0000042 Ga0373927_0000042_13623_14477 255
47 3300039437 Ga0436365_1040418 Ga0436365_1040418_286_1098 255
48 3300050510 nmdc:mga06r32_319730_c1 nmdc:mga06r32_319730_c1_360_1157 255
49 3300050513 nmdc:mga0rr50_289681_c1 nmdc:mga0rr50_289681_c1_144_941 255
50 3300050515 nmdc:mga0a205_43510_c1 nmdc:mga0a205_43510_c1_301_1098 255
51 3300005436 Ga0070713_100146291 Ga0070713_1001462912 256
52 3300010159 Ga0099796_10004762 Ga0099796_100047622 256
53 3300025928 Ga0207700_10273846 Ga0207700_102738462 256
54 3300046664 Ga0495659_0027646 Ga0495659_0027646_997_1872 256
55 3300005364 Ga0070673_100364980 Ga0070673_1003649802 257
56 3300014325 Ga0163163_10051685 Ga0163163_100516852 257
57 3300037418 Ga0395900_0215647 Ga0395900_0215647_356_1177 257
58 3300037466 Ga0395898_0555604 Ga0395898_0555604_270_1079 257
59 3300037853 Ga0436364_1410238 Ga0436364_1410238_602_1399 257
60 3300005344 Ga0070661_100095783 Ga0070661_1000957832 258
61 3300005563 Ga0068855_100097869 Ga0068855_1000978693 258
62 3300006871 Ga0075434_100028030 Ga0075434_1000280304 258
63 3300006871 Ga0075434_100223234 Ga0075434_1002232342 258
64 3300006871 Ga0075434_100627689 Ga0075434_1006276891 258
65 3300006914 Ga0075436_100108850 Ga0075436_1001088501 258
66 3300009147 Ga0114129_10627239 Ga0114129_106272392 258
67 3300013104 Ga0157370_10070561 Ga0157370_100705612 258
68 3300013105 Ga0157369_10042261 Ga0157369_100422614 258
69 3300013307 Ga0157372_10033997 Ga0157372_100339973 258
70 3300014497 Ga0182008_10115603 Ga0182008_101156032 258
71 3300025920 Ga0207649_10078004 Ga0207649_100780043 258
72 3300025949 Ga0207667_10143629 Ga0207667_101436292 258
73 3300045976 Ga0466967_0029825 Ga0466967_0029825_1094_1912 258
74 3300047321 Ga0495676_0119736 Ga0495676_0119736_1035_1829 258
75 3300048912 Ga0496109_0042764 Ga0496109_0042764_1955_2749 258
76 3300048914 Ga0496111_0025792 Ga0496111_0025792_217_1011 258
77 3300048915 Ga0496112_0237957 Ga0496112_0237957_191_985 258
78 3300048916 Ga0496113_0100806 Ga0496113_0100806_151_945 258
79 3300050512 nmdc:mga0n895_214205_c1 nmdc:mga0n895_214205_c1_550_1386 258
80 3300050512 nmdc:mga0n895_25761_c1 nmdc:mga0n895_25761_c1_1176_1988 258
81 3300050512 nmdc:mga0n895_44497_c1 nmdc:mga0n895_44497_c1_76_912 258
82 3300050513 nmdc:mga0rr50_97718_c1 nmdc:mga0rr50_97718_c1_655_1491 258
83 3300050515 nmdc:mga0a205_227173_c1 nmdc:mga0a205_227173_c1_817_1629 258
84 3300006871 Ga0075434_100017065 Ga0075434_1000170652 259
85 3300006871 Ga0075434_100509850 Ga0075434_1005098502 259
86 3300007076 Ga0075435_100023623 Ga0075435_1000236234 259
87 3300009147 Ga0114129_10030210 Ga0114129_100302103 259
88 3300009147 Ga0114129_10480900 Ga0114129_104809002 259
89 3300009553 Ga0105249_10293016 Ga0105249_102930162 259
90 3300014326 Ga0157380_10337173 Ga0157380_103371732 259
91 3300020070 Ga0206356_10096535 Ga0206356_100965351 259
92 3300020081 Ga0206354_10416802 Ga0206354_104168021 259
93 3300022467 Ga0224712_10011212 Ga0224712_100112123 259
94 3300025903 Ga0207680_10380291 Ga0207680_103802911 259
95 3300035692 Ga0373935_0080124 Ga0373935_0080124_128_907 259
96 3300035725 Ga0373947_0114798 Ga0373947_0114798_759_1538 259
97 3300037068 Ga0373925_0063687 Ga0373925_0063687_86_865 259
98 3300037418 Ga0395900_0029556 Ga0395900_0029556_3504_4325 259
99 3300046664 Ga0495659_0021210 Ga0495659_0021210_106_918 259
100 3300047471 Ga0495684_0145865 Ga0495684_0145865_608_1387 259
101 3300050507 nmdc:mga05p37_120316_c1 nmdc:mga05p37_120316_c1_689_1504 259
102 3300050512 nmdc:mga0n895_462898_c1 nmdc:mga0n895_462898_c1_150_965 259
103 3300050512 nmdc:mga0n895_486801_c1 nmdc:mga0n895_486801_c1_84_1013 259
104 3300050513 nmdc:mga0rr50_19516_c1 nmdc:mga0rr50_19516_c1_850_1665 259
105 3300050513 nmdc:mga0rr50_316654_c1 nmdc:mga0rr50_316654_c1_303_1232 259
106 3300050515 nmdc:mga0a205_656564_c1 nmdc:mga0a205_656564_c1_23_838 259
107 3300005434 Ga0070709_10071592 Ga0070709_100715922 260
108 3300025928 Ga0207700_10391893 Ga0207700_103918931 260
109 3300025937 Ga0207669_10155493 Ga0207669_101554932 260
110 3300035083 Ga0373926_0065858 Ga0373926_0065858_516_1301 261
111 3300035692 Ga0373935_0274752 Ga0373935_0274752_330_1175 261
112 3300035725 Ga0373947_0002757 Ga0373947_0002757_4537_5382 261
113 3300037068 Ga0373925_0069036 Ga0373925_0069036_462_1307 261
114 3300046473 Ga0495582_0099363 Ga0495582_0099363_280_1125 261
115 3300048088 Ga0495602_0409654 Ga0495602_0409654_38_823 261
116 2162886007 SwRhRL2b_contig_1647996 SwRhRL2b_0140.00004270 262
117 3300004803 Ga0058862_10068974 Ga0058862_100689743 262
118 3300005289 Ga0065704_10002853 Ga0065704_100028533 262
119 3300005293 Ga0065715_10107969 Ga0065715_101079693 262
120 3300005295 Ga0065707_10087557 Ga0065707_100875573 262
121 3300005330 Ga0070690_100023323 Ga0070690_1000233234 262
122 3300005338 Ga0068868_100126313 Ga0068868_1001263131 262
123 3300005340 Ga0070689_100026660 Ga0070689_1000266605 262
124 3300005344 Ga0070661_100114452 Ga0070661_1001144521 262
125 3300005345 Ga0070692_10020509 Ga0070692_100205093 262
126 3300005353 Ga0070669_100006326 Ga0070669_1000063266 262
127 3300005354 Ga0070675_100349443 Ga0070675_1003494431 262
128 3300005355 Ga0070671_100080644 Ga0070671_1000806443 262
129 3300005364 Ga0070673_100119626 Ga0070673_1001196262 262
130 3300005365 Ga0070688_100032416 Ga0070688_1000324162 262
131 3300005366 Ga0070659_100057974 Ga0070659_1000579743 262
132 3300005435 Ga0070714_100025751 Ga0070714_1000257515 262
133 3300005440 Ga0070705_100028331 Ga0070705_1000283313 262
134 3300005441 Ga0070700_100004410 Ga0070700_1000044105 262
135 3300005444 Ga0070694_100015582 Ga0070694_1000155821 262
136 3300005457 Ga0070662_100014872 Ga0070662_1000148725 262
137 3300005458 Ga0070681_10000864 Ga0070681_1000086412 262
138 3300005459 Ga0068867_100006248 Ga0068867_1000062486 262
139 3300005467 Ga0070706_100004855 Ga0070706_1000048556 262
140 3300005468 Ga0070707_100265606 Ga0070707_1002656062 262
141 3300005471 Ga0070698_100083704 Ga0070698_1000837043 262
142 3300005471 Ga0070698_100091057 Ga0070698_1000910573 262
143 3300005518 Ga0070699_100001573 Ga0070699_10000157313 262
144 3300005518 Ga0070699_100004316 Ga0070699_1000043164 262
145 3300005530 Ga0070679_100028847 Ga0070679_1000288475 262
146 3300005536 Ga0070697_100042596 Ga0070697_1000425964 262
147 3300005543 Ga0070672_100013234 Ga0070672_1000132343 262
148 3300005543 Ga0070672_100358765 Ga0070672_1003587652 262
149 3300005547 Ga0070693_100225983 Ga0070693_1002259832 262
150 3300005549 Ga0070704_100001721 Ga0070704_1000017211 262
151 3300005577 Ga0068857_100045477 Ga0068857_1000454773 262
152 3300005577 Ga0068857_100103891 Ga0068857_1001038912 262
153 3300005617 Ga0068859_100000637 Ga0068859_10000063730 262
154 3300005618 Ga0068864_100028384 Ga0068864_1000283843 262
155 3300005719 Ga0068861_100002665 Ga0068861_1000026657 262
156 3300005840 Ga0068870_10008471 Ga0068870_100084715 262
157 3300005840 Ga0068870_10056975 Ga0068870_100569752 262
158 3300005841 Ga0068863_100031920 Ga0068863_1000319202 262
159 3300005842 Ga0068858_100120720 Ga0068858_1001207202 262
160 3300005843 Ga0068860_100118131 Ga0068860_1001181312 262
161 3300005843 Ga0068860_100185982 Ga0068860_1001859823 262
162 3300005844 Ga0068862_100004347 Ga0068862_1000043477 262
163 3300005844 Ga0068862_100190326 Ga0068862_1001903262 262
164 3300005937 Ga0081455_10102375 Ga0081455_101023752 262
165 3300006028 Ga0070717_10002026 Ga0070717_100020267 262
166 3300006237 Ga0097621_100054453 Ga0097621_1000544534 262
167 3300006844 Ga0075428_100157648 Ga0075428_1001576483 262
168 3300006852 Ga0075433_10001139 Ga0075433_1000113920 262
169 3300006871 Ga0075434_100000126 Ga0075434_10000012616 262
170 3300006871 Ga0075434_100399076 Ga0075434_1003990761 262
171 3300006880 Ga0075429_100100750 Ga0075429_1001007502 262
172 3300006931 Ga0097620_100000637 Ga0097620_10000063730 262
173 3300007076 Ga0075435_100008404 Ga0075435_1000084046 262
174 3300007076 Ga0075435_100018896 Ga0075435_1000188964 262
175 3300009094 Ga0111539_10011670 Ga0111539_100116708 262
176 3300009147 Ga0114129_10057442 Ga0114129_100574423 262
177 3300009148 Ga0105243_10042120 Ga0105243_100421202 262
178 3300009174 Ga0105241_10654011 Ga0105241_106540111 262
179 3300009176 Ga0105242_10018284 Ga0105242_100182843 262
180 3300009553 Ga0105249_10032163 Ga0105249_100321632 262
181 3300011119 Ga0105246_10083610 Ga0105246_100836101 262
182 3300013104 Ga0157370_10367584 Ga0157370_103675841 262
183 3300013105 Ga0157369_10144066 Ga0157369_101440663 262
184 3300013297 Ga0157378_10267037 Ga0157378_102670372 262
185 3300013306 Ga0163162_10014070 Ga0163162_100140704 262
186 3300013306 Ga0163162_10703979 Ga0163162_107039792 262
187 3300013308 Ga0157375_10007605 Ga0157375_100076054 262
188 3300014326 Ga0157380_10011959 Ga0157380_100119596 262
189 3300014969 Ga0157376_10043957 Ga0157376_100439574 262
190 3300020070 Ga0206356_10656542 Ga0206356_106565423 262
191 3300020078 Ga0206352_10507898 Ga0206352_105078983 262
192 3300020081 Ga0206354_10198382 Ga0206354_101983822 262
193 3300025904 Ga0207647_10075416 Ga0207647_100754162 262
194 3300025908 Ga0207643_10005649 Ga0207643_100056495 262
195 3300025908 Ga0207643_10064800 Ga0207643_100648002 262
196 3300025910 Ga0207684_10000723 Ga0207684_100007235 262
197 3300025910 Ga0207684_10039765 Ga0207684_100397654 262
198 3300025910 Ga0207684_10084645 Ga0207684_100846452 262
199 3300025912 Ga0207707_10058718 Ga0207707_100587183 262
200 3300025918 Ga0207662_10007725 Ga0207662_100077256 262
201 3300025922 Ga0207646_10057989 Ga0207646_100579892 262
202 3300025923 Ga0207681_10003425 Ga0207681_100034258 262
203 3300025925 Ga0207650_10092883 Ga0207650_100928833 262
204 3300025926 Ga0207659_10164720 Ga0207659_101647202 262
205 3300025933 Ga0207706_10118956 Ga0207706_101189561 262
206 3300025934 Ga0207686_10039800 Ga0207686_100398003 262
207 3300025936 Ga0207670_10068695 Ga0207670_100686952 262
208 3300025940 Ga0207691_10023910 Ga0207691_100239105 262
209 3300025940 Ga0207691_10169109 Ga0207691_101691092 262
210 3300025961 Ga0207712_10103962 Ga0207712_101039622 262
211 3300025972 Ga0207668_10024435 Ga0207668_100244352 262
212 3300025981 Ga0207640_10063712 Ga0207640_100637123 262
213 3300026035 Ga0207703_10110223 Ga0207703_101102232 262
214 3300026075 Ga0207708_10008149 Ga0207708_100081495 262
215 3300026075 Ga0207708_10093644 Ga0207708_100936441 262
216 3300026089 Ga0207648_10002160 Ga0207648_100021606 262
217 3300026095 Ga0207676_10002027 Ga0207676_1000202714 262
218 3300026116 Ga0207674_10016344 Ga0207674_100163443 262
219 3300026116 Ga0207674_10115599 Ga0207674_101155992 262
220 3300026118 Ga0207675_100005431 Ga0207675_1000054315 262
221 3300027907 Ga0207428_10006089 Ga0207428_100060895 262
222 3300028380 Ga0268265_10000430 Ga0268265_100004306 262
223 3300028381 Ga0268264_10099156 Ga0268264_100991562 262
224 3300028381 Ga0268264_10391962 Ga0268264_103919622 262
225 3300028800 Ga0265338_10295091 Ga0265338_102950912 262
226 3300031241 Ga0265325_10007834 Ga0265325_100078343 262
227 3300035241 Ga0373961_0024570 Ga0373961_0024570_813_1601 262
228 3300035691 Ga0373931_0130878 Ga0373931_0130878_383_1171 262
229 3300035695 Ga0373927_0025498 Ga0373927_0025498_188_1114 262
230 3300035725 Ga0373947_0096278 Ga0373947_0096278_310_1236 262
231 3300037068 Ga0373925_0065760 Ga0373925_0065760_1700_2566 262
232 3300045051 Ga0451576_0034317 Ga0451576_0034317_4495_5283 262
233 3300045051 Ga0451576_0100029 Ga0451576_0100029_1908_2696 262
234 3300045051 Ga0451576_0369322 Ga0451576_0369322_43_930 262
235 3300045836 Ga0466958_0318161 Ga0466958_0318161_49_921 262
236 3300046472 Ga0495580_0058282 Ga0495580_0058282_1049_1975 262
237 3300046472 Ga0495580_0204160 Ga0495580_0204160_321_1145 262
238 3300046664 Ga0495659_0024597 Ga0495659_0024597_755_1570 262
239 3300046684 Ga0495669_0049300 Ga0495669_0049300_567_1442 262
240 3300047318 Ga0495636_0012605 Ga0495636_0012605_787_1602 262
241 3300050511 nmdc:mga08y16_2241_c1 nmdc:mga08y16_2241_c1_5977_6765 262
242 3300050512 nmdc:mga0n895_1046_c1 nmdc:mga0n895_1046_c1_1027_1887 262
243 3300050513 nmdc:mga0rr50_68859_c1 nmdc:mga0rr50_68859_c1_1316_2161 262
244 3300050513 nmdc:mga0rr50_9013_c1 nmdc:mga0rr50_9013_c1_3027_3887 262
245 3300050514 nmdc:mga08x19_68699_c1 nmdc:mga08x19_68699_c1_1381_2253 262
246 iso_pu_bacteria 2513237098 2513675990 262

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02679

ComA

(2R)-phospho-3-sulfolactate synthase (ComA)

60

299

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qwg-assembly1.cif.gz_A crystal structure of methanococcus jannaschii phosphosulfolactate synthase 0.8748 7 247
1u83-assembly1.cif.gz_A psl synthase from bacillus subtilis 0.8559 11 244
1qwg-assembly1.cif.gz_A crystal structure of methanococcus jannaschii phosphosulfolactate synthase 0.8385 7 247
1u83-assembly1.cif.gz_A psl synthase from bacillus subtilis 0.7925 11 244
6h3c-assembly1.cif.gz_J cryo-em structure of the brisc complex bound to shmt2 0.7107 86 161
ID Description Score Start End Superfamily
1qwgA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8748 7 247 3.20.20.70
1u83A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8537 11 244 3.20.20.70
1qwgA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8385 7 247 3.20.20.70
1u83A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7899 11 244 3.20.20.70
af_Q653W2_25_286_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7561 3 239 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2V9DEW1-F1-model_v4 Phosphosulfolactate synthase 0.9814 2 254
AF-A0A2V8XY13-F1-model_v4 Phosphosulfolactate synthase 0.9795 3 254
AF-A0A2V7IUI2-F1-model_v4 Phosphosulfolactate synthase 0.9776 55 250
AF-A0A3B0ZX59-F1-model_v4 Phosphosulfolactate synthase (EC 4.4.1.19) 0.9767 2 253 GO:0043817
AF-A0A2V7FL72-F1-model_v4 Phosphosulfolactate synthase 0.976 49 250

Feature Viewer

pLDDT pTM Quality
90.04 0.88 High
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Predicted Structure (AlphaFold2)

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