F358274

General Info

Members Datasets Scaffolds Average Seq Length
246 145 492 232

Family's Representative Sequence

Representative Sequence 3300031249|Ga0265339_10048061|Ga0265339_100480612
Length 259
Sequence VRAAFRIGTFGGQGTARPTFNSCPSVVEFMKTKILIVEDDAHILLGLEEVLKSEGYDVASCNRGDQAVGAVARYQPALVVLDVMLPGLSGYDICKQLRAKKVAVPILMLTAKGQELDKVIGLDLGADDYVTKPFGVRELLARIQALLRRTGKTGDPAASEDVFQIGSATIDPKTFQVKRGKTVVELTAKELKLLQVFHARAGEVLSRDKLLNEVWGYNYYGTTRTLDQVIVQLRKKLGDHGSEPKHLLTIHGVGYKLVA

Samples

Sample ID Description Type Environment
1 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
79 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
80 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
81 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
95 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
96 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
97 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
98 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
99 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
100 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
101 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
102 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
121 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
122 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.41
Nodule 0
Rhizoplane 0.41
Rhizosphere 98.37
Stem 0
Stem Tuber 0
Unclassified 1.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265339_10048061 3300031249 Bacteria 2341
2 rootH2_10148810 3300003320 Bacteria 8635
3 rootL2_10162825 3300003322 Bacteria 7494
4 Ga0065712_10113521 3300005290 Bacteria 1781
5 Ga0070680_100546545 3300005336 Bacteria 993
6 Ga0068868_100353887 3300005338 Bacteria 1258
7 Ga0070660_100148944 3300005339 Bacteria 1881
8 Ga0070689_100010354 3300005340 Bacteria 6648
9 Ga0070689_100106113 3300005340 Bacteria 2228
10 Ga0070689_100111160 3300005340 Bacteria 2179
11 Ga0070689_100360022 3300005340 Bacteria 1222
12 Ga0070687_100090761 3300005343 Bacteria 1689
13 Ga0070675_100001840 3300005354 Bacteria 15660
14 Ga0070673_100215432 3300005364 Bacteria 1660
15 Ga0070688_100027314 3300005365 Bacteria 3399
16 Ga0070688_100229483 3300005365 Bacteria 1312
17 Ga0070667_100561828 3300005367 Bacteria 1049
18 Ga0070714_100045231 3300005435 Bacteria 3730
19 Ga0070713_100617050 3300005436 Bacteria 1031
20 Ga0070701_10037869 3300005438 Bacteria 2437
21 Ga0070701_10124449 3300005438 Bacteria 1457
22 Ga0070711_100002192 3300005439 Bacteria 11087
23 Ga0070694_100485086 3300005444 Bacteria 981
24 Ga0070708_100260664 3300005445 Bacteria 1630
25 Ga0070685_10013228 3300005466 Unclassified 4348
26 Ga0070685_10300073 3300005466 Bacteria 1082
27 Ga0070685_10376452 3300005466 Bacteria 977
28 Ga0070707_100912228 3300005468 Bacteria 843
29 Ga0070679_100410645 3300005530 Bacteria 1299
30 Ga0070684_100184201 3300005535 Bacteria 1899
31 Ga0070684_100462256 3300005535 Bacteria 1173
32 Ga0070686_100179023 3300005544 Bacteria 1505
33 Ga0070686_100343763 3300005544 Bacteria 1119
34 Ga0070704_100393133 3300005549 Bacteria 1181
35 Ga0068855_100061209 3300005563 Bacteria 4399
36 Ga0068855_100906960 3300005563 Bacteria 931
37 Ga0068856_100046798 3300005614 Bacteria 4261
38 Ga0068856_100106201 3300005614 Bacteria 2802
39 Ga0068856_100324098 3300005614 Bacteria 1558
40 Ga0068856_100379132 3300005614 Bacteria 1433
41 Ga0068859_100017089 3300005617 Bacteria 7284
42 Ga0068859_100047652 3300005617 Bacteria 4306
43 Ga0068859_100339172 3300005617 Bacteria 1597
44 Ga0068859_100627532 3300005617 Bacteria 1167
45 Ga0068864_100281435 3300005618 Bacteria 1552
46 Ga0068861_100293303 3300005719 Bacteria 1405
47 Ga0068861_100433154 3300005719 Bacteria 1174
48 Ga0068863_100199103 3300005841 Bacteria 1926
49 Ga0068863_100290172 3300005841 Bacteria 1586
50 Ga0068863_100785678 3300005841 Bacteria 949
51 Ga0068858_100433446 3300005842 Bacteria 1265
52 Ga0068858_100566454 3300005842 Bacteria 1100
53 Ga0068860_100887854 3300005843 Bacteria 907
54 Ga0068862_100245629 3300005844 Bacteria 1629
55 Ga0081455_10090619 3300005937 Bacteria 2478
56 Ga0070712_100031996 3300006175 Bacteria 3549
57 Ga0097621_100096266 3300006237 Bacteria 2484
58 Ga0075428_101062343 3300006844 Bacteria 856
59 Ga0075430_100727819 3300006846 Bacteria 818
60 Ga0075431_100091569 3300006847 Bacteria 3138
61 Ga0075434_100719953 3300006871 Bacteria 1015
62 Ga0075429_100021187 3300006880 Bacteria 5635
63 Ga0075429_100501226 3300006880 Bacteria 1064
64 Ga0075429_100647146 3300006880 Bacteria 926
65 Ga0075436_100133421 3300006914 Bacteria 1742
66 Ga0097620_100017089 3300006931 Bacteria 7284
67 Ga0097620_100047652 3300006931 Bacteria 4306
68 Ga0097620_100339140 3300006931 Bacteria 1597
69 Ga0097620_100627436 3300006931 Bacteria 1167
70 Ga0105240_10000618 3300009093 Bacteria 65886
71 Ga0105240_10048613 3300009093 Bacteria 5360
72 Ga0105240_10246722 3300009093 Bacteria 2067
73 Ga0105240_10277708 3300009093 Bacteria 1926
74 Ga0111539_10120185 3300009094 Bacteria 3078
75 Ga0111539_10125662 3300009094 Bacteria 3005
76 Ga0111539_10256071 3300009094 Bacteria 2038
77 Ga0105245_10482843 3300009098 Bacteria 1253
78 Ga0105248_10900087 3300009177 Bacteria 999
79 Ga0105238_10001646 3300009551 Bacteria 22395
80 Ga0105238_10001809 3300009551 Bacteria 21424
81 Ga0105238_10142891 3300009551 Bacteria 2370
82 Ga0157370_10015323 3300013104 Bacteria 7797
83 Ga0157370_10479858 3300013104 Bacteria 1142
84 Ga0157374_10019746 3300013296 Bacteria 5970
85 Ga0157374_10184202 3300013296 Bacteria 2041
86 Ga0157378_11098346 3300013297 Bacteria 832
87 Ga0157372_10426953 3300013307 Bacteria 1545
88 Ga0157372_11601753 3300013307 Bacteria 750
89 Ga0163163_10000083 3300014325 Bacteria 104503
90 Ga0163163_10129259 3300014325 Bacteria 2566
91 Ga0163163_10600451 3300014325 Bacteria 1164
92 Ga0157379_10190218 3300014968 Bacteria 1855
93 Ga0157376_10247754 3300014969 Bacteria 1663
94 Ga0157376_10467673 3300014969 Bacteria 1233
95 Ga0207707_10075934 3300025912 Bacteria 2932
96 Ga0207695_10000022 3300025913 Bacteria 659090
97 Ga0207695_10059235 3300025913 Bacteria 3972
98 Ga0207695_10463887 3300025913 Bacteria 1149
99 Ga0207663_10031879 3300025916 Bacteria 3124
100 Ga0207657_10260533 3300025919 Bacteria 1380
101 Ga0207652_10497130 3300025921 Bacteria 1098
102 Ga0207646_10724647 3300025922 Bacteria 888
103 Ga0207694_10008081 3300025924 Bacteria 7951
104 Ga0207694_10011700 3300025924 Bacteria 6619
105 Ga0207659_10001739 3300025926 Bacteria 12916
106 Ga0207700_10662717 3300025928 Bacteria 931
107 Ga0207664_10060888 3300025929 Bacteria 3010
108 Ga0207670_10006185 3300025936 Bacteria 6623
109 Ga0207670_10008040 3300025936 Bacteria 5929
110 Ga0207670_10008588 3300025936 Bacteria 5773
111 Ga0207670_10015117 3300025936 Bacteria 4603
112 Ga0207670_10017989 3300025936 Bacteria 4283
113 Ga0207670_10089301 3300025936 Bacteria 2175
114 Ga0207670_10324072 3300025936 Bacteria 1213
115 Ga0207711_10402384 3300025941 Bacteria 1272
116 Ga0207711_10512374 3300025941 Bacteria 1118
117 Ga0207667_10106303 3300025949 Unclassified 2895
118 Ga0207651_10439757 3300025960 Bacteria 1117
119 Ga0207703_10233055 3300026035 Bacteria 1652
120 Ga0207703_10575257 3300026035 Bacteria 1064
121 Ga0207639_10246235 3300026041 Bacteria 1557
122 Ga0207708_10642463 3300026075 Bacteria 903
123 Ga0207702_10009697 3300026078 Bacteria 8086
124 Ga0207702_10080488 3300026078 Bacteria 2826
125 Ga0207702_10252684 3300026078 Bacteria 1656
126 Ga0207641_10096087 3300026088 Bacteria 2602
127 Ga0207676_10640908 3300026095 Bacteria 1024
128 Ga0207675_100231682 3300026118 Bacteria 1782
129 Ga0207675_100428230 3300026118 Bacteria 1308
130 Ga0265337_1001373 3300028556 Bacteria 11976
131 Ga0265337_1001455 3300028556 Bacteria 11610
132 Ga0265337_1002115 3300028556 Bacteria 9370
133 Ga0265337_1013129 3300028556 Bacteria 2793
134 Ga0265334_10010873 3300028573 Bacteria 3842
135 Ga0265334_10016969 3300028573 Bacteria 3011
136 Ga0265318_10020704 3300028577 Bacteria 2651
137 Ga0265336_10000507 3300028666 Bacteria 22737
138 Ga0265338_10000008 3300028800 Bacteria 481542
139 Ga0265338_10000552 3300028800 Bacteria 65513
140 Ga0265338_10001835 3300028800 Bacteria 33316
141 Ga0265338_10002101 3300028800 Bacteria 30750
142 Ga0265338_10002784 3300028800 Bacteria 25558
143 Ga0265338_10002935 3300028800 Bacteria 24739
144 Ga0265338_10004643 3300028800 Bacteria 18461
145 Ga0265338_10026280 3300028800 Bacteria 5879
146 Ga0265338_10099492 3300028800 Bacteria 2375
147 Ga0265338_10106978 3300028800 Bacteria 2263
148 Ga0265338_10122253 3300028800 Bacteria 2072
149 Ga0265338_10130497 3300028800 Bacteria 1985
150 Ga0265338_10304311 3300028800 Bacteria 1158
151 Ga0265324_10001087 3300029957 Bacteria 16364
152 Ga0265324_10014590 3300029957 Bacteria 2904
153 Ga0265324_10023132 3300029957 Bacteria 2216
154 Ga0265324_10075241 3300029957 Bacteria 1149
155 Ga0265320_10002014 3300031240 Bacteria 14348
156 Ga0265320_10009715 3300031240 Bacteria 5775
157 Ga0265320_10016470 3300031240 Bacteria 4140
158 Ga0265320_10042770 3300031240 Bacteria 2245
159 Ga0265325_10198569 3300031241 Bacteria 926
160 Ga0265340_10007548 3300031247 Bacteria 5900
161 Ga0265340_10050055 3300031247 Bacteria 2028
162 Ga0265339_10122531 3300031249 Bacteria 1335
163 Ga0265327_10001028 3300031251 Bacteria 39368
164 Ga0265316_10088856 3300031344 Bacteria 2359
165 Ga0316579_10004836 3300031691 Bacteria 5385
166 Ga0316579_10097112 3300031691 Bacteria 1409
167 Ga0265314_10048712 3300031711 Bacteria 2971
168 Ga0265342_10115297 3300031712 Bacteria 1517
169 Ga0316576_10199410 3300031727 Bacteria 1508
170 Ga0316578_10064697 3300031728 Bacteria 2158
171 Ga0316577_10000977 3300031733 Bacteria 12771
172 Ga0316577_10013442 3300031733 Bacteria 4474
173 Ga0373930_0014448 3300034816 Bacteria 1470
174 Ga0373928_0000288 3300035084 Bacteria 9958
175 Ga0373929_0097426 3300035085 Bacteria 737
176 Ga0373944_0000165 3300035089 Bacteria 13307
177 Ga0373951_0038117 3300035091 Bacteria 1151
178 Ga0373932_0000002 3300035112 Bacteria 711821
179 Ga0373945_0006126 3300035116 Bacteria 3868
180 Ga0373954_0012906 3300035118 Bacteria 3720
181 Ga0373946_0039825 3300035171 Bacteria 1920
182 Ga0373962_0000280 3300035242 Bacteria 10990
183 Ga0373931_0000012 3300035691 Bacteria 267735
184 Ga0373935_0193782 3300035692 Bacteria 1401
185 Ga0373937_0021627 3300036401 Bacteria 5773
186 Ga0373937_0144703 3300036401 Bacteria 2225
187 Ga0373937_0358723 3300036401 Bacteria 1381
188 Ga0316584_0057449 3300036712 Bacteria 2913
189 Ga0373925_0001369 3300037068 Bacteria 21260
190 Ga0373925_0040464 3300037068 Bacteria 3451
191 Ga0451577_0000963 3300042876 Bacteria 42128
192 Ga0453684_0002961 3300044712 Bacteria 39757
193 Ga0453684_0016394 3300044712 Bacteria 11589
194 Ga0451576_0037759 3300045051 Bacteria 5115
195 Ga0451576_0095641 3300045051 Bacteria 3090
196 Ga0451576_0183836 3300045051 Bacteria 2182
197 Ga0451576_0394263 3300045051 Bacteria 1451
198 Ga0451576_0557693 3300045051 Bacteria 1204
199 Ga0451576_0666673 3300045051 Bacteria 1093
200 Ga0451576_1004623 3300045051 Bacteria 874
201 Ga0451576_1312664 3300045051 Bacteria 754
202 Ga0495592_0000052 3300046454 Bacteria 109203
203 Ga0495592_0021991 3300046454 Bacteria 4853
204 Ga0495582_0150915 3300046473 Bacteria 1319
205 Ga0495664_0079275 3300046477 Bacteria 1968
206 Ga0495608_0540271 3300046511 Bacteria 703
207 Ga0495618_0006173 3300046514 Bacteria 7270
208 Ga0495628_0000331 3300046516 Bacteria 42855
209 Ga0495628_0132808 3300046516 Bacteria 1903
210 Ga0495628_0589372 3300046516 Bacteria 795
211 Ga0495630_0004361 3300046517 Bacteria 9936
212 Ga0495666_0088041 3300046526 Bacteria 1467
213 Ga0495666_0180997 3300046526 Bacteria 973
214 Ga0495652_0159479 3300046529 Bacteria 1753
215 Ga0495640_0207758 3300046533 Bacteria 1239
216 Ga0495586_0001856 3300046535 Bacteria 11505
217 Ga0495586_0002328 3300046535 Bacteria 10332
218 Ga0495645_0071232 3300046543 Bacteria 2507
219 Ga0495645_0149900 3300046543 Bacteria 1621
220 Ga0495645_0207979 3300046543 Bacteria 1323
221 Ga0495667_0120993 3300046559 Unclassified 1690
222 Ga0495634_0225983 3300046642 Bacteria 1153
223 Ga0495635_0331994 3300046663 Bacteria 1016
224 Ga0495599_0007726 3300046678 Bacteria 6531
225 Ga0495599_0015692 3300046678 Bacteria 4701
226 Ga0495599_0092418 3300046678 Bacteria 1888
227 Ga0495647_0038437 3300046681 Bacteria 1810
228 Ga0495658_0069132 3300046683 Bacteria 2046
229 Ga0495613_0560695 3300046689 Unclassified 763
230 Ga0495600_0333050 3300046809 Bacteria 953
231 Ga0495581_0330369 3300047315 Bacteria 890
232 Ga0495604_0261189 3300047317 Bacteria 1177
233 Ga0495674_0016633 3300047319 Bacteria 6863
234 Ga0495674_0111956 3300047319 Bacteria 2313
235 Ga0495675_0288383 3300047444 Bacteria 977
236 Ga0495684_0166838 3300047471 Bacteria 1640
237 Ga0496115_0003448 3300048918 Bacteria 11357
238 nmdc:mga09592_304781_c1 3300050508 Bacteria 1381
239 nmdc:mga09592_432946_c1 3300050508 Bacteria 1135
240 nmdc:mga0qj67_430583_c1 3300050509 Bacteria 1063
241 nmdc:mga06r32_11382_c1 3300050510 Bacteria 8012
242 nmdc:mga06r32_52412_c1 3300050510 Bacteria 2765
243 nmdc:mga08y16_174698_c1 3300050511 Bacteria 2230
244 nmdc:mga08x19_82265_c1 3300050514 Bacteria 2115
245 nmdc:mga0a205_518678_c1 3300050515 Bacteria 1048
246 Ga0500650_0130756 3300053098 Bacteria 1167
247 Ga0265339_10048061
248 rootH2_10148810
249 rootL2_10162825
250 Ga0065712_10113521
251 Ga0070680_100546545
252 Ga0068868_100353887
253 Ga0070660_100148944
254 Ga0070689_100010354
255 Ga0070689_100106113
256 Ga0070689_100111160
257 Ga0070689_100360022
258 Ga0070687_100090761
259 Ga0070675_100001840
260 Ga0070673_100215432
261 Ga0070688_100027314
262 Ga0070688_100229483
263 Ga0070667_100561828
264 Ga0070714_100045231
265 Ga0070713_100617050
266 Ga0070701_10037869
267 Ga0070701_10124449
268 Ga0070711_100002192
269 Ga0070694_100485086
270 Ga0070708_100260664
271 Ga0070685_10013228
272 Ga0070685_10300073
273 Ga0070685_10376452
274 Ga0070707_100912228
275 Ga0070679_100410645
276 Ga0070684_100184201
277 Ga0070684_100462256
278 Ga0070686_100179023
279 Ga0070686_100343763
280 Ga0070704_100393133
281 Ga0068855_100061209
282 Ga0068855_100906960
283 Ga0068856_100046798
284 Ga0068856_100106201
285 Ga0068856_100324098
286 Ga0068856_100379132
287 Ga0068859_100017089
288 Ga0068859_100047652
289 Ga0068859_100339172
290 Ga0068859_100627532
291 Ga0068864_100281435
292 Ga0068861_100293303
293 Ga0068861_100433154
294 Ga0068863_100199103
295 Ga0068863_100290172
296 Ga0068863_100785678
297 Ga0068858_100433446
298 Ga0068858_100566454
299 Ga0068860_100887854
300 Ga0068862_100245629
301 Ga0081455_10090619
302 Ga0070712_100031996
303 Ga0097621_100096266
304 Ga0075428_101062343
305 Ga0075430_100727819
306 Ga0075431_100091569
307 Ga0075434_100719953
308 Ga0075429_100021187
309 Ga0075429_100501226
310 Ga0075429_100647146
311 Ga0075436_100133421
312 Ga0097620_100017089
313 Ga0097620_100047652
314 Ga0097620_100339140
315 Ga0097620_100627436
316 Ga0105240_10000618
317 Ga0105240_10048613
318 Ga0105240_10246722
319 Ga0105240_10277708
320 Ga0111539_10120185
321 Ga0111539_10125662
322 Ga0111539_10256071
323 Ga0105245_10482843
324 Ga0105248_10900087
325 Ga0105238_10001646
326 Ga0105238_10001809
327 Ga0105238_10142891
328 Ga0157370_10015323
329 Ga0157370_10479858
330 Ga0157374_10019746
331 Ga0157374_10184202
332 Ga0157378_11098346
333 Ga0157372_10426953
334 Ga0157372_11601753
335 Ga0163163_10000083
336 Ga0163163_10129259
337 Ga0163163_10600451
338 Ga0157379_10190218
339 Ga0157376_10247754
340 Ga0157376_10467673
341 Ga0207707_10075934
342 Ga0207695_10000022
343 Ga0207695_10059235
344 Ga0207695_10463887
345 Ga0207663_10031879
346 Ga0207657_10260533
347 Ga0207652_10497130
348 Ga0207646_10724647
349 Ga0207694_10008081
350 Ga0207694_10011700
351 Ga0207659_10001739
352 Ga0207700_10662717
353 Ga0207664_10060888
354 Ga0207670_10006185
355 Ga0207670_10008040
356 Ga0207670_10008588
357 Ga0207670_10015117
358 Ga0207670_10017989
359 Ga0207670_10089301
360 Ga0207670_10324072
361 Ga0207711_10402384
362 Ga0207711_10512374
363 Ga0207667_10106303
364 Ga0207651_10439757
365 Ga0207703_10233055
366 Ga0207703_10575257
367 Ga0207639_10246235
368 Ga0207708_10642463
369 Ga0207702_10009697
370 Ga0207702_10080488
371 Ga0207702_10252684
372 Ga0207641_10096087
373 Ga0207676_10640908
374 Ga0207675_100231682
375 Ga0207675_100428230
376 Ga0265337_1001373
377 Ga0265337_1001455
378 Ga0265337_1002115
379 Ga0265337_1013129
380 Ga0265334_10010873
381 Ga0265334_10016969
382 Ga0265318_10020704
383 Ga0265336_10000507
384 Ga0265338_10000008
385 Ga0265338_10000552
386 Ga0265338_10001835
387 Ga0265338_10002101
388 Ga0265338_10002784
389 Ga0265338_10002935
390 Ga0265338_10004643
391 Ga0265338_10026280
392 Ga0265338_10099492
393 Ga0265338_10106978
394 Ga0265338_10122253
395 Ga0265338_10130497
396 Ga0265338_10304311
397 Ga0265324_10001087
398 Ga0265324_10014590
399 Ga0265324_10023132
400 Ga0265324_10075241
401 Ga0265320_10002014
402 Ga0265320_10009715
403 Ga0265320_10016470
404 Ga0265320_10042770
405 Ga0265325_10198569
406 Ga0265340_10007548
407 Ga0265340_10050055
408 Ga0265339_10122531
409 Ga0265327_10001028
410 Ga0265316_10088856
411 Ga0316579_10004836
412 Ga0316579_10097112
413 Ga0265314_10048712
414 Ga0265342_10115297
415 Ga0316576_10199410
416 Ga0316578_10064697
417 Ga0316577_10000977
418 Ga0316577_10013442
419 Ga0373930_0014448
420 Ga0373928_0000288
421 Ga0373929_0097426
422 Ga0373944_0000165
423 Ga0373951_0038117
424 Ga0373932_0000002
425 Ga0373945_0006126
426 Ga0373954_0012906
427 Ga0373946_0039825
428 Ga0373962_0000280
429 Ga0373931_0000012
430 Ga0373935_0193782
431 Ga0373937_0021627
432 Ga0373937_0144703
433 Ga0373937_0358723
434 Ga0316584_0057449
435 Ga0373925_0001369
436 Ga0373925_0040464
437 Ga0451577_0000963
438 Ga0453684_0002961
439 Ga0453684_0016394
440 Ga0451576_0037759
441 Ga0451576_0095641
442 Ga0451576_0183836
443 Ga0451576_0394263
444 Ga0451576_0557693
445 Ga0451576_0666673
446 Ga0451576_1004623
447 Ga0451576_1312664
448 Ga0495592_0000052
449 Ga0495592_0021991
450 Ga0495582_0150915
451 Ga0495664_0079275
452 Ga0495608_0540271
453 Ga0495618_0006173
454 Ga0495628_0000331
455 Ga0495628_0132808
456 Ga0495628_0589372
457 Ga0495630_0004361
458 Ga0495666_0088041
459 Ga0495666_0180997
460 Ga0495652_0159479
461 Ga0495640_0207758
462 Ga0495586_0001856
463 Ga0495586_0002328
464 Ga0495645_0071232
465 Ga0495645_0149900
466 Ga0495645_0207979
467 Ga0495667_0120993
468 Ga0495634_0225983
469 Ga0495635_0331994
470 Ga0495599_0007726
471 Ga0495599_0015692
472 Ga0495599_0092418
473 Ga0495647_0038437
474 Ga0495658_0069132
475 Ga0495613_0560695
476 Ga0495600_0333050
477 Ga0495581_0330369
478 Ga0495604_0261189
479 Ga0495674_0016633
480 Ga0495674_0111956
481 Ga0495675_0288383
482 Ga0495684_0166838
483 Ga0496115_0003448
484 nmdc:mga09592_304781_c1
485 nmdc:mga09592_432946_c1
486 nmdc:mga0qj67_430583_c1
487 nmdc:mga06r32_11382_c1
488 nmdc:mga06r32_52412_c1
489 nmdc:mga08y16_174698_c1
490 nmdc:mga08x19_82265_c1
491 nmdc:mga0a205_518678_c1
492 Ga0500650_0130756

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

34

144

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

180

257

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9743 3 120
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9741 4 121
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9737 4 121
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.971 2 120
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.9662 3 120
ID Description Score Start End Superfamily
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9929 4 84 3.40.50.2300
af_P9WGM7_2_84_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9783 1 79 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9777 1 79 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9775 1 120 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9772 2 79 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A258YR77-F1-model_v4 Hybrid sensor histidine kinase/response regulator 0.9834 1 120 GO:0000155
AF-A0A1F6CTP4-F1-model_v4 Response regulatory domain-containing protein 0.9784 2 121 GO:0000160
GO:0016791
AF-A0A4Q5X212-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9781 2 120 GO:0000160
GO:0005524
GO:0006355
GO:0016887
GO:0043565
AF-A0A1G3BEP8-F1-model_v4 Fis family transcriptional regulator 0.9753 2 120 GO:0000160
GO:0005524
GO:0006355
GO:0016887
GO:0043565
AF-A0A1F5AAV0-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9721 2 121 GO:0000160
GO:0005524
GO:0006355
GO:0016887
GO:0043565

Map