F358352

General Info

Members Datasets Scaffolds Average Seq Length
246 141 492 372

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0208158|Ga0436361_0208158_6122_7249
Length 375
Sequence MTPSDDGGRREALFSIRFGVLVLSTVAAGFAFWALRTILAPLALAIFLLLVIDGLARALAERTRLPRTVAMPLAIVLIVAMFGLAIWLVGVNGKGFAADAPLFSARMDQLLQQISGRTGLDMPPTFSNLMEKLNPAHWVGVVATAARELIEQSVFVLIYLGFLLASQHGFGRKVGMMLGSDARQQEVGRVMERVRRGVESYVFVQTVVGVVIGALSALIMWPMGLQHVFFFAFVIFLTNYVPAIGAAVGVLLPPLFALLEFDDLWRPIGMLVGLEAVHFGVSHVLQPRLQGQKLNLDPIFVLLGLTFWGFLWGLTGAFLSTPLTVAVMAVLAEQKSARWAAVLLSSDGRPFADETGPPAPPQGAAGPQPTQKAAP

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
43 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
44 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
91 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
95 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
98 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
99 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
100 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
101 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
102 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
118 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
119 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
120 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
121 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
122 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
123 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
124 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
125 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
126 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
127 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
128 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
129 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
130 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
131 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
132 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
133 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
134 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
135 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
136 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
137 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
138 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
139 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
140 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
141 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.37
Metatranscriptomes 0
Isolates 1.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.41
Nodule 0
Rhizoplane 2.44
Rhizosphere 77.64
Stem 0
Stem Tuber 0
Unclassified 1.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_0208158 3300039447 Bacteria 7757
2 Ga0055530_10001413 3300003791 Bacteria 17642
3 Ga0065165_1001142 3300005262 Bacteria 31092
4 Ga0070658_10014535 3300005327 Bacteria 6318
5 Ga0070658_10028574 3300005327 Bacteria 4478
6 Ga0070670_100000004 3300005331 Bacteria 392110
7 Ga0070670_100102889 3300005331 Bacteria 2460
8 Ga0070666_10039726 3300005335 Bacteria 3137
9 Ga0070660_100011730 3300005339 Bacteria 6239
10 Ga0070660_100053747 3300005339 Bacteria 3107
11 Ga0070660_100167624 3300005339 Bacteria 1772
12 Ga0070668_100000961 3300005347 Bacteria 20135
13 Ga0070668_100003294 3300005347 Bacteria 11919
14 Ga0070668_100004141 3300005347 Bacteria 10738
15 Ga0070668_100007054 3300005347 Bacteria 8327
16 Ga0070669_100002041 3300005353 Bacteria 14610
17 Ga0070671_100002143 3300005355 Bacteria 15242
18 Ga0070659_100000194 3300005366 Bacteria 46646
19 Ga0070659_100055837 3300005366 Bacteria 3113
20 Ga0070667_100000105 3300005367 Bacteria 106633
21 Ga0070667_100002569 3300005367 Bacteria 15778
22 Ga0070667_100215214 3300005367 Bacteria 1709
23 Ga0070681_10002130 3300005458 Bacteria 17987
24 Ga0070679_100065242 3300005530 Bacteria 3629
25 Ga0070665_100000198 3300005548 Bacteria 105999
26 Ga0070665_100000945 3300005548 Bacteria 37054
27 Ga0070665_100001194 3300005548 Bacteria 31673
28 Ga0070665_100045439 3300005548 Bacteria 4411
29 Ga0070665_100103207 3300005548 Bacteria 2854
30 Ga0068855_100019472 3300005563 Bacteria 8155
31 Ga0068854_100138013 3300005578 Bacteria 1868
32 Ga0068856_100165144 3300005614 Bacteria 2225
33 Ga0068856_100196197 3300005614 Bacteria 2033
34 Ga0068859_100000930 3300005617 Bacteria 29992
35 Ga0068859_100019771 3300005617 Bacteria 6760
36 Ga0068864_100000106 3300005618 Bacteria 81202
37 Ga0068864_100001229 3300005618 Bacteria 21305
38 Ga0068864_100021640 3300005618 Bacteria 5385
39 Ga0068864_100459755 3300005618 Bacteria 1218
40 Ga0068863_100000079 3300005841 Bacteria 107383
41 Ga0068863_100000560 3300005841 Bacteria 37696
42 Ga0068863_100001315 3300005841 Bacteria 24750
43 Ga0068863_100022770 3300005841 Bacteria 5984
44 Ga0068863_100043705 3300005841 Bacteria 4253
45 Ga0068858_100000006 3300005842 Bacteria 256011
46 Ga0068858_100005137 3300005842 Bacteria 12825
47 Ga0068858_100007859 3300005842 Bacteria 10281
48 Ga0068858_100148722 3300005842 Bacteria 2201
49 Ga0068860_100000066 3300005843 Bacteria 182836
50 Ga0068860_100000077 3300005843 Bacteria 171297
51 Ga0068860_100127927 3300005843 Bacteria 2435
52 Ga0068862_100000457 3300005844 Bacteria 44218
53 Ga0068862_100016879 3300005844 Bacteria 6076
54 Ga0068862_100130289 3300005844 Bacteria 2224
55 Ga0075365_10132752 3300006038 Bacteria 1724
56 Ga0075363_100062508 3300006048 Bacteria 2008
57 Ga0075363_100101605 3300006048 Bacteria 1592
58 Ga0075364_10001761 3300006051 Bacteria 11966
59 Ga0075367_10000883 3300006178 Bacteria 12032
60 Ga0075370_10005916 3300006353 Bacteria 6119
61 Ga0068865_100000753 3300006881 Bacteria 18176
62 Ga0097620_100000930 3300006931 Bacteria 29992
63 Ga0097620_100019771 3300006931 Bacteria 6760
64 Ga0105240_10000428 3300009093 Bacteria 77995
65 Ga0105240_10121330 3300009093 Bacteria 3147
66 Ga0105240_10142061 3300009093 Unclassified 2869
67 Ga0105248_10000203 3300009177 Bacteria 68397
68 Ga0105248_10029852 3300009177 Bacteria 6084
69 Ga0105248_10111953 3300009177 Bacteria 3079
70 Ga0105248_10154697 3300009177 Bacteria 2588
71 Ga0105238_10023892 3300009551 Bacteria 6229
72 Ga0105238_10044993 3300009551 Bacteria 4460
73 Ga0105238_10058308 3300009551 Bacteria 3870
74 Ga0105249_10001110 3300009553 Bacteria 23920
75 Ga0105239_10398368 3300010375 Bacteria 1558
76 Ga0163162_10185571 3300013306 Bacteria 2207
77 Ga0157375_10013102 3300013308 Bacteria 7369
78 Ga0163163_10002788 3300014325 Bacteria 14762
79 Ga0163163_10041233 3300014325 Bacteria 4513
80 Ga0163163_10109017 3300014325 Bacteria 2796
81 Ga0163163_10136143 3300014325 Bacteria 2497
82 Ga0157379_10008482 3300014968 Bacteria 8941
83 Ga0157379_10014946 3300014968 Bacteria 6807
84 Ga0157379_10021391 3300014968 Bacteria 5725
85 Ga0157376_10139787 3300014969 Bacteria 2171
86 Ga0209026_1000750 3300025250 Bacteria 18442
87 Ga0209758_1003927 3300025297 Bacteria 12964
88 Ga0209050_1000073 3300025298 Bacteria 292046
89 Ga0209257_1001052 3300025304 Bacteria 36631
90 Ga0209257_1003117 3300025304 Bacteria 14827
91 Ga0207680_10037589 3300025903 Bacteria 2796
92 Ga0207705_10002222 3300025909 Bacteria 14985
93 Ga0207705_10111329 3300025909 Bacteria 2023
94 Ga0207707_10035434 3300025912 Bacteria 4364
95 Ga0207695_10002095 3300025913 Bacteria 30360
96 Ga0207695_10013089 3300025913 Bacteria 9905
97 Ga0207695_10039768 3300025913 Bacteria 5051
98 Ga0207695_10048356 3300025913 Bacteria 4492
99 Ga0207695_10106620 3300025913 Unclassified 2788
100 Ga0207695_10121754 3300025913 Bacteria 2576
101 Ga0207660_10001963 3300025917 Bacteria 13715
102 Ga0207657_10001390 3300025919 Bacteria 25814
103 Ga0207657_10234721 3300025919 Bacteria 1466
104 Ga0207652_10001537 3300025921 Bacteria 20342
105 Ga0207681_10008689 3300025923 Bacteria 6202
106 Ga0207694_10007620 3300025924 Bacteria 8207
107 Ga0207694_10103329 3300025924 Bacteria 2260
108 Ga0207694_10117533 3300025924 Bacteria 2120
109 Ga0207650_10000033 3300025925 Bacteria 226809
110 Ga0207644_10000907 3300025931 Bacteria 18778
111 Ga0207644_10032424 3300025931 Bacteria 3645
112 Ga0207644_10054395 3300025931 Bacteria 2883
113 Ga0207690_10000031 3300025932 Bacteria 154724
114 Ga0207706_10012540 3300025933 Bacteria 7719
115 Ga0207704_10012002 3300025938 Bacteria 4286
116 Ga0207711_10000368 3300025941 Bacteria 47898
117 Ga0207711_10069900 3300025941 Bacteria 3044
118 Ga0207711_10082034 3300025941 Bacteria 2818
119 Ga0207711_10086552 3300025941 Bacteria 2748
120 Ga0207711_10196024 3300025941 Bacteria 1842
121 Ga0207711_10224921 3300025941 Bacteria 1717
122 Ga0207667_10002879 3300025949 Bacteria 21366
123 Ga0207667_10129379 3300025949 Bacteria 2600
124 Ga0207651_10046250 3300025960 Bacteria 2925
125 Ga0207712_10003397 3300025961 Bacteria 10066
126 Ga0207668_10000004 3300025972 Bacteria 201204
127 Ga0207668_10000426 3300025972 Bacteria 26589
128 Ga0207668_10001424 3300025972 Bacteria 14072
129 Ga0207668_10014067 3300025972 Bacteria 4947
130 Ga0207658_10000628 3300025986 Bacteria 31184
131 Ga0207658_10008579 3300025986 Bacteria 6954
132 Ga0207658_10026419 3300025986 Bacteria 4070
133 Ga0207703_10000027 3300026035 Bacteria 209608
134 Ga0207703_10014762 3300026035 Bacteria 6097
135 Ga0207703_10017971 3300026035 Bacteria 5522
136 Ga0207639_10172826 3300026041 Bacteria 1831
137 Ga0207639_10180925 3300026041 Bacteria 1793
138 Ga0207639_10324867 3300026041 Unclassified 1367
139 Ga0207702_10066902 3300026078 Bacteria 3082
140 Ga0207641_10000003 3300026088 Bacteria 496984
141 Ga0207641_10001887 3300026088 Bacteria 20119
142 Ga0207641_10031981 3300026088 Bacteria 4366
143 Ga0207641_10050076 3300026088 Bacteria 3533
144 Ga0207641_10096894 3300026088 Bacteria 2591
145 Ga0207676_10000068 3300026095 Bacteria 104705
146 Ga0207676_10000084 3300026095 Bacteria 90543
147 Ga0207676_10002738 3300026095 Bacteria 12546
148 Ga0207676_10021599 3300026095 Bacteria 4724
149 Ga0207676_10277613 3300026095 Bacteria 1520
150 Ga0207676_10404172 3300026095 Bacteria 1277
151 Ga0207698_10238713 3300026142 Bacteria 1655
152 Ga0209999_1000385 3300027543 Bacteria 6743
153 Ga0209983_1003330 3300027665 Bacteria 3441
154 Ga0268266_10000003 3300028379 Bacteria 1701703
155 Ga0268266_10001430 3300028379 Bacteria 28467
156 Ga0268266_10010287 3300028379 Bacteria 8188
157 Ga0268266_10041862 3300028379 Bacteria 3911
158 Ga0268266_10063519 3300028379 Bacteria 3187
159 Ga0268265_10010256 3300028380 Bacteria 6328
160 Ga0268265_10087103 3300028380 Bacteria 2484
161 Ga0268264_10000032 3300028381 Bacteria 408337
162 Ga0268264_10000113 3300028381 Bacteria 203262
163 Ga0307517_10009099 3300028786 Bacteria 14145
164 Ga0307517_10018952 3300028786 Bacteria 8861
165 Ga0307513_10009020 3300031456 Bacteria 12650
166 Ga0307513_10025338 3300031456 Bacteria 6875
167 Ga0307513_10028932 3300031456 Bacteria 6327
168 Ga0307508_10198903 3300031616 Bacteria 1605
169 Ga0307510_10069560 3300033180 Bacteria 3524
170 Ga0373944_0026084 3300035089 Bacteria 1724
171 Ga0373927_0000111 3300035695 Bacteria 62031
172 Ga0373947_0058172 3300035725 Bacteria 2342
173 Ga0373947_0105892 3300035725 Bacteria 1772
174 Ga0373925_0000209 3300037068 Bacteria 64086
175 Ga0373925_0078436 3300037068 Bacteria 2508
176 Ga0395899_0000026 3300037312 Bacteria 345291
177 Ga0395899_0000307 3300037312 Bacteria 62610
178 Ga0395899_0029676 3300037312 Bacteria 4114
179 Ga0395899_0101991 3300037312 Bacteria 2070
180 Ga0395900_0000976 3300037418 Bacteria 37190
181 Ga0395898_0038485 3300037466 Bacteria 4739
182 Ga0395898_0158082 3300037466 Bacteria 2168
183 Ga0395905_0081120 3300037471 Bacteria 3040
184 Ga0395901_0000001 3300038443 Bacteria 800383
185 Ga0395901_0154912 3300038443 Bacteria 2407
186 Ga0395901_0168408 3300038443 Bacteria 2299
187 Ga0395901_0460718 3300038443 Unclassified 1299
188 Ga0495662_0067997 3300046476 Bacteria 1725
189 Ga0495583_0052286 3300046506 Bacteria 1859
190 Ga0495606_0080360 3300046507 Bacteria 2029
191 Ga0495630_0078797 3300046517 Bacteria 2485
192 Ga0495644_0040832 3300046523 Bacteria 1749
193 Ga0495597_0003125 3300046542 Bacteria 9933
194 Ga0495645_0223102 3300046543 Bacteria 1266
195 Ga0495622_0001495 3300046557 Bacteria 11700
196 Ga0495668_0024638 3300046616 Bacteria 3422
197 Ga0495668_0047620 3300046616 Bacteria 2380
198 Ga0495611_0006647 3300046648 Bacteria 4922
199 Ga0495599_0193853 3300046678 Bacteria 1249
200 Ga0495669_0000006 3300046684 Bacteria 190838
201 Ga0495669_0005493 3300046684 Bacteria 5291
202 Ga0495686_0002475 3300047472 Bacteria 17394
203 Ga0495593_0018620 3300047673 Bacteria 3901
204 Ga0495602_0174568 3300048088 Bacteria 1664
205 Ga0496100_0073519 3300048903 Bacteria 2288
206 Ga0496102_0010033 3300048905 Bacteria 8146
207 Ga0496102_0110515 3300048905 Bacteria 2562
208 Ga0496109_0029467 3300048912 Bacteria 4916
209 Ga0496115_0000886 3300048918 Bacteria 21772
210 Ga0496115_0009343 3300048918 Bacteria 7286
211 Ga0496116_0036116 3300048919 Bacteria 3463
212 Ga0496118_0003890 3300048921 Bacteria 18327
213 Ga0496119_0072525 3300048922 Bacteria 2011
214 Ga0496121_0000042 3300048924 Bacteria 342304
215 Ga0501033_0033219 3300049570 Bacteria 3874
216 Ga0501047_0004716 3300049581 Bacteria 12823
217 Ga0501047_0058457 3300049581 Bacteria 3725
218 Ga0501047_0137186 3300049581 Bacteria 2326
219 Ga0501048_0155193 3300049582 Bacteria 1619
220 Ga0501044_0008403 3300049823 Bacteria 11322
221 Ga0501044_0385580 3300049823 Bacteria 1316
222 nmdc:mga03n38_8671_c1 3300050490 Bacteria 3661
223 nmdc:mga00v17_13387_c1 3300050491 Bacteria 4553
224 nmdc:mga0k408_77011_c1 3300050493 Bacteria 1950
225 nmdc:mga06z11_6144_c1 3300050494 Bacteria 4863
226 nmdc:mga07m45_2301_c1 3300050496 Bacteria 8942
227 Ga0500635_0000051 3300053080 Bacteria 76510
228 Ga0500651_0007899 3300053093 Bacteria 6224
229 Ga0500641_0006074 3300053096 Bacteria 4280
230 Ga0500555_002071 3300053103 Bacteria 5896
231 Ga0500562_002517 3300053108 Bacteria 4578
232 Ga0500595_008547 3300053119 Bacteria 4178
233 Ga0500607_084695 3300053121 Bacteria 1609
234 Ga0500559_0011272 3300053136 Bacteria 3820
235 Ga0500577_0074240 3300053142 Bacteria 1341
236 Ga0500590_008014 3300053148 Bacteria 5257
237 Ga0500624_005787 3300053157 Bacteria 1655
238 Ga0500636_0020413 3300053177 Bacteria 3923
239 Ga0500637_0004284 3300053178 Bacteria 6746
240 Ga0500625_069762 3300053729 Bacteria 1567
241 Ga0500645_001844 3300053730 Bacteria 10159
242 Ga0500596_003050 3300053735 Bacteria 3225
243 2644001131 2643221598 Bacteria 4578346
244 2644087540 2643221614 Bacteria 4260023
245 2644344416 2643221661 Bacteria 4267604
246 2644366900 2643221666 Bacteria 4265935
247 Ga0436361_0208158
248 Ga0055530_10001413
249 Ga0065165_1001142
250 Ga0070658_10014535
251 Ga0070658_10028574
252 Ga0070670_100000004
253 Ga0070670_100102889
254 Ga0070666_10039726
255 Ga0070660_100011730
256 Ga0070660_100053747
257 Ga0070660_100167624
258 Ga0070668_100000961
259 Ga0070668_100003294
260 Ga0070668_100004141
261 Ga0070668_100007054
262 Ga0070669_100002041
263 Ga0070671_100002143
264 Ga0070659_100000194
265 Ga0070659_100055837
266 Ga0070667_100000105
267 Ga0070667_100002569
268 Ga0070667_100215214
269 Ga0070681_10002130
270 Ga0070679_100065242
271 Ga0070665_100000198
272 Ga0070665_100000945
273 Ga0070665_100001194
274 Ga0070665_100045439
275 Ga0070665_100103207
276 Ga0068855_100019472
277 Ga0068854_100138013
278 Ga0068856_100165144
279 Ga0068856_100196197
280 Ga0068859_100000930
281 Ga0068859_100019771
282 Ga0068864_100000106
283 Ga0068864_100001229
284 Ga0068864_100021640
285 Ga0068864_100459755
286 Ga0068863_100000079
287 Ga0068863_100000560
288 Ga0068863_100001315
289 Ga0068863_100022770
290 Ga0068863_100043705
291 Ga0068858_100000006
292 Ga0068858_100005137
293 Ga0068858_100007859
294 Ga0068858_100148722
295 Ga0068860_100000066
296 Ga0068860_100000077
297 Ga0068860_100127927
298 Ga0068862_100000457
299 Ga0068862_100016879
300 Ga0068862_100130289
301 Ga0075365_10132752
302 Ga0075363_100062508
303 Ga0075363_100101605
304 Ga0075364_10001761
305 Ga0075367_10000883
306 Ga0075370_10005916
307 Ga0068865_100000753
308 Ga0097620_100000930
309 Ga0097620_100019771
310 Ga0105240_10000428
311 Ga0105240_10121330
312 Ga0105240_10142061
313 Ga0105248_10000203
314 Ga0105248_10029852
315 Ga0105248_10111953
316 Ga0105248_10154697
317 Ga0105238_10023892
318 Ga0105238_10044993
319 Ga0105238_10058308
320 Ga0105249_10001110
321 Ga0105239_10398368
322 Ga0163162_10185571
323 Ga0157375_10013102
324 Ga0163163_10002788
325 Ga0163163_10041233
326 Ga0163163_10109017
327 Ga0163163_10136143
328 Ga0157379_10008482
329 Ga0157379_10014946
330 Ga0157379_10021391
331 Ga0157376_10139787
332 Ga0209026_1000750
333 Ga0209758_1003927
334 Ga0209050_1000073
335 Ga0209257_1001052
336 Ga0209257_1003117
337 Ga0207680_10037589
338 Ga0207705_10002222
339 Ga0207705_10111329
340 Ga0207707_10035434
341 Ga0207695_10002095
342 Ga0207695_10013089
343 Ga0207695_10039768
344 Ga0207695_10048356
345 Ga0207695_10106620
346 Ga0207695_10121754
347 Ga0207660_10001963
348 Ga0207657_10001390
349 Ga0207657_10234721
350 Ga0207652_10001537
351 Ga0207681_10008689
352 Ga0207694_10007620
353 Ga0207694_10103329
354 Ga0207694_10117533
355 Ga0207650_10000033
356 Ga0207644_10000907
357 Ga0207644_10032424
358 Ga0207644_10054395
359 Ga0207690_10000031
360 Ga0207706_10012540
361 Ga0207704_10012002
362 Ga0207711_10000368
363 Ga0207711_10069900
364 Ga0207711_10082034
365 Ga0207711_10086552
366 Ga0207711_10196024
367 Ga0207711_10224921
368 Ga0207667_10002879
369 Ga0207667_10129379
370 Ga0207651_10046250
371 Ga0207712_10003397
372 Ga0207668_10000004
373 Ga0207668_10000426
374 Ga0207668_10001424
375 Ga0207668_10014067
376 Ga0207658_10000628
377 Ga0207658_10008579
378 Ga0207658_10026419
379 Ga0207703_10000027
380 Ga0207703_10014762
381 Ga0207703_10017971
382 Ga0207639_10172826
383 Ga0207639_10180925
384 Ga0207639_10324867
385 Ga0207702_10066902
386 Ga0207641_10000003
387 Ga0207641_10001887
388 Ga0207641_10031981
389 Ga0207641_10050076
390 Ga0207641_10096894
391 Ga0207676_10000068
392 Ga0207676_10000084
393 Ga0207676_10002738
394 Ga0207676_10021599
395 Ga0207676_10277613
396 Ga0207676_10404172
397 Ga0207698_10238713
398 Ga0209999_1000385
399 Ga0209983_1003330
400 Ga0268266_10000003
401 Ga0268266_10001430
402 Ga0268266_10010287
403 Ga0268266_10041862
404 Ga0268266_10063519
405 Ga0268265_10010256
406 Ga0268265_10087103
407 Ga0268264_10000032
408 Ga0268264_10000113
409 Ga0307517_10009099
410 Ga0307517_10018952
411 Ga0307513_10009020
412 Ga0307513_10025338
413 Ga0307513_10028932
414 Ga0307508_10198903
415 Ga0307510_10069560
416 Ga0373944_0026084
417 Ga0373927_0000111
418 Ga0373947_0058172
419 Ga0373947_0105892
420 Ga0373925_0000209
421 Ga0373925_0078436
422 Ga0395899_0000026
423 Ga0395899_0000307
424 Ga0395899_0029676
425 Ga0395899_0101991
426 Ga0395900_0000976
427 Ga0395898_0038485
428 Ga0395898_0158082
429 Ga0395905_0081120
430 Ga0395901_0000001
431 Ga0395901_0154912
432 Ga0395901_0168408
433 Ga0395901_0460718
434 Ga0495662_0067997
435 Ga0495583_0052286
436 Ga0495606_0080360
437 Ga0495630_0078797
438 Ga0495644_0040832
439 Ga0495597_0003125
440 Ga0495645_0223102
441 Ga0495622_0001495
442 Ga0495668_0024638
443 Ga0495668_0047620
444 Ga0495611_0006647
445 Ga0495599_0193853
446 Ga0495669_0000006
447 Ga0495669_0005493
448 Ga0495686_0002475
449 Ga0495593_0018620
450 Ga0495602_0174568
451 Ga0496100_0073519
452 Ga0496102_0010033
453 Ga0496102_0110515
454 Ga0496109_0029467
455 Ga0496115_0000886
456 Ga0496115_0009343
457 Ga0496116_0036116
458 Ga0496118_0003890
459 Ga0496119_0072525
460 Ga0496121_0000042
461 Ga0501033_0033219
462 Ga0501047_0004716
463 Ga0501047_0058457
464 Ga0501047_0137186
465 Ga0501048_0155193
466 Ga0501044_0008403
467 Ga0501044_0385580
468 nmdc:mga03n38_8671_c1
469 nmdc:mga00v17_13387_c1
470 nmdc:mga0k408_77011_c1
471 nmdc:mga06z11_6144_c1
472 nmdc:mga07m45_2301_c1
473 Ga0500635_0000051
474 Ga0500651_0007899
475 Ga0500641_0006074
476 Ga0500555_002071
477 Ga0500562_002517
478 Ga0500595_008547
479 Ga0500607_084695
480 Ga0500559_0011272
481 Ga0500577_0074240
482 Ga0500590_008014
483 Ga0500624_005787
484 Ga0500636_0020413
485 Ga0500637_0004284
486 Ga0500625_069762
487 Ga0500645_001844
488 Ga0500596_003050
489 2644001131
490 2644087540
491 2644344416
492 2644366900

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01594

AI-2E_transport

AI-2E family transporter

18

334

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nb6-assembly1.cif.gz_A structure of the autoinducer-2 exporter tqsa from e. coli 0.7879 5 341
7nb6-assembly1.cif.gz_A structure of the autoinducer-2 exporter tqsa from e. coli 0.7775 5 341
7w7r-assembly2.cif.gz_D-3 high resolution structure of a fish aquaporin reveals a novel extracellular fold. 0.2372 192 348
5cwf-assembly3.cif.gz_C crystal structure of de novo designed helical repeat protein dhr8 0.2258 181 343
5nen-assembly1.cif.gz_B crystal structure of the soluble domain of lipc, a membrane fusion protein of a type i secretion system 0.2254 29 191
ID Description Score Start End Superfamily
af_A0A6H2EED7_1_133_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.334 173 283 1.20.140.150
af_I1KQG5_242_405_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2947 158 325 1.20.1250.20
af_I1KQG5_242_405_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2874 158 325 1.20.1250.20
af_P16431_180_537_1.10.645.10 Mainly Alpha;Orthogonal Bundle;Cytochrome-c3 Hydrogenase; chain B;Cytochrome-c3 Hydrogenase, chain B 0.2861 188 299 1.10.645.10
af_A0A6H2EED7_1_133_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.2851 173 283 1.20.140.150
ID Description Score Start End GO Terms
AF-A0A5C7RDR0-F1-model_v4 AI-2E family transporter 0.8941 11 344 GO:0016020
GO:0055085
AF-A0A6P2BE34-F1-model_v4 AI-2E family transporter 0.8916 3 344 GO:0016020
GO:0055085
AF-A0A259MF15-F1-model_v4 AI-2E family transporter 0.8893 2 344 GO:0016020
GO:0055085
AF-A0A2N1TC32-F1-model_v4 AI-2E family transporter 0.8815 9 344 GO:0016020
GO:0055085
AF-A0A2A2T1X0-F1-model_v4 AI-2E family transporter 0.8733 1 341 GO:0016020
GO:0055085

Map