F358487

General Info

Members Datasets Scaffolds Average Seq Length
246 202 492 572

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0002878|Ga0496117_0002878_16037_17911
Length 592
Sequence LRGGRTIVFVWVSLPFSTLPGFAAMFVNDPTLCLYEIFSTLWRCAMADEREFRVRKKAGGGISRSGRVVSGNRSRFGHGQRASIQANRLISSRSRNTVVKARVVRHTAFAAPLGTHLNYLRREGVTRDGEKARLFGPGTENADAGAFAERCQDDRHHFRFIVSPDDAVEMSDLKSFTHDLVGQMEKDLGTRLDWVAVDHWNTEHPHVHLIVRGIRDDGQDLVISRDYIKEITQELGPRTDLDIRRTLERQIETERWTQLDRQLVQDARATGIVDLAPRPDQQPNAFHALKVGRLRTLEVLGVAGQIGHSQWFIKPEAETVLRELGERGDIIKRMHKALTDRGIERGSANYVLAGESLDEPIIGRLIDRGLDDELKGTAYAVVDGVDGRTHHIKLPDLDAAGDSAPGSVVELRRFDDARGERRVALAVRSDLDIERQVTASGATWLDRQAVAREPLSLADGGFGAEVQHAMDRRADHLVEQGFAGRQGRSVVFSRQLVDTLRRREMDALGEKLTAETGQPFNRAGSGEYVAGTYRQRFALASGRFAVIDDGLGFQLVPWSPSLEKQLGKHVSGVARNDGGIDWSFGRKRGLGL

Samples

Sample ID Description Type Environment
1 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
7 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
8 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
9 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
10 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
11 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
12 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
13 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
14 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
15 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
16 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
17 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
18 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
19 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
20 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
21 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
26 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
27 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
28 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
29 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
30 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
31 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
35 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
36 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
37 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
38 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
39 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
40 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
41 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
42 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
43 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
44 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
49 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
50 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
51 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
52 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
53 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
54 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
55 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
56 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
57 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
58 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
59 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
60 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
61 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
62 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
63 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
64 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
65 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
66 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
67 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
81 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
82 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
85 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
86 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
87 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
88 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
89 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
90 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
91 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
92 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
93 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
94 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
95 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
96 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
97 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
98 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
99 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
100 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
101 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
102 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
103 2643221582 Rhizobium sp. Root651 Isolate Unclassified
104 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
105 2643221674 Devosia sp. Root436 Isolate Unclassified
106 2643221736 Bosea sp. Root483D1 Isolate Unclassified
107 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
108 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
109 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
110 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
111 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
112 2773857925 Microvirga vignae BR3299 Isolate Unclassified
113 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
114 2802429634 Rhizobium anhuiense S10 Isolate Nodule
115 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
116 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
117 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
118 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
119 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
120 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
121 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
122 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
123 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
124 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
125 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
126 2842694124 Methylopila sp. R-72369 Isolate Unclassified
127 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
128 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
129 2854911287 Brucella lupini LUP21 Isolate Unclassified
130 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
131 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
132 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
133 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
134 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
135 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
136 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
137 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
138 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
139 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
140 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
141 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
142 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
143 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
144 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
145 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
146 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
147 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
148 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
149 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
150 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
151 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
152 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
153 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
154 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
155 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
156 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
157 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
158 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
159 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
160 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
161 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
162 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
163 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
164 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
165 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
166 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
167 2936381700 Rhizobium chutanense C16 Isolate Unclassified
168 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
169 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
170 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
171 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
172 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
173 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
174 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
175 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
176 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
177 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
178 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
179 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
180 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
181 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
182 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
183 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
184 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
185 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
186 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
187 3004167301 Mesorhizobium loti 582 Isolate Unclassified
188 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
189 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
190 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
191 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
192 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
193 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
194 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
195 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
196 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
197 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
198 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
199 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
200 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
201 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
202 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 51.63
Metatranscriptomes 0
Isolates 48.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.72
Nodule 37.4
Rhizoplane 2.44
Rhizosphere 35.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496117_0002878 3300048920 Bacteria 20891
2 SwRhRL2b_contig_988462 2162886007 Bacteria 17062
3 JGI25165J46597_1000078 3300003214 Bacteria 179320
4 Ga0055531_10014570 3300003794 Bacteria 3532
5 Ga0065704_10070267 3300005289 Bacteria 43544
6 Ga0068854_100028068 3300005578 Bacteria 3885
7 Ga0075368_10000215 3300006042 Bacteria 16082
8 Ga0075363_100045834 3300006048 Bacteria 2319
9 Ga0075367_10000094 3300006178 Bacteria 24410
10 Ga0099826_10000025 3300006948 Bacteria 146840
11 Ga0099826_10000056 3300006948 Bacteria 70004
12 Ga0105240_10000005 3300009093 Bacteria 702630
13 Ga0105240_10000024 3300009093 Bacteria 375919
14 Ga0105239_10025352 3300010375 Bacteria 6528
15 Ga0157371_10000346 3300013102 Bacteria 59564
16 Ga0157370_10000163 3300013104 Bacteria 81428
17 Ga0157370_10000180 3300013104 Bacteria 79428
18 Ga0214544_1007116 3300021320 Bacteria 19975
19 Ga0214542_1007023 3300021321 Bacteria 19963
20 Ga0214545_1006664 3300021324 Bacteria 19963
21 Ga0214543_1004668 3300021327 Bacteria 25808
22 Ga0209233_1000150 3300025261 Bacteria 179401
23 Ga0209758_1003275 3300025297 Bacteria 15014
24 Ga0209050_1021603 3300025298 Bacteria 2339
25 Ga0209257_1000490 3300025304 Bacteria 71185
26 Ga0209257_1005675 3300025304 Bacteria 8597
27 Ga0207695_10000011 3300025913 Bacteria 910221
28 Ga0207695_10000036 3300025913 Bacteria 477897
29 Ga0207640_10019617 3300025981 Bacteria 3998
30 Ga0209389_1000089 3300027296 Bacteria 83505
31 Ga0209589_1000148 3300027357 Bacteria 77222
32 Ga0209589_1000175 3300027357 Bacteria 73346
33 Ga0209489_113220 3300027361 Bacteria 6838
34 Ga0209700_100029 3300027363 Bacteria 214607
35 Ga0209282_1000084 3300027666 Bacteria 70012
36 Ga0209282_1000299 3300027666 Bacteria 24490
37 Ga0209813_10000083 3300027866 Bacteria 34743
38 Ga0268266_10000989 3300028379 Bacteria 35805
39 Ga0265337_1011855 3300028556 Bacteria 2987
40 Ga0265338_10000151 3300028800 Bacteria 126283
41 Ga0265324_10000695 3300029957 Bacteria 22428
42 Ga0307408_100017434 3300031548 Bacteria 4806
43 Ga0307408_100018165 3300031548 Bacteria 4719
44 Ga0265314_10023627 3300031711 Bacteria 4681
45 Ga0307405_10012776 3300031731 Bacteria 4459
46 Ga0307412_10017370 3300031911 Bacteria 4306
47 Ga0315914_1000129 3300031967 Bacteria 70013
48 Ga0315913_1000034 3300033430 Bacteria 70013
49 Ga0315915_1000066 3300033464 Bacteria 70010
50 Ga0373927_0048548 3300035695 Bacteria 2746
51 Ga0373947_0025499 3300035725 Bacteria 3449
52 Ga0395899_0000059 3300037312 Bacteria 213004
53 Ga0395900_0000017 3300037418 Bacteria 369602
54 Ga0395898_0000030 3300037466 Bacteria 369577
55 Ga0395905_0000056 3300037471 Bacteria 209230
56 Ga0395901_0000015 3300038443 Bacteria 373388
57 Ga0439448_0007720 3300042005 Bacteria 3125
58 Ga0495638_0000029 3300046460 Bacteria 330201
59 Ga0495584_0046382 3300046491 Bacteria 2192
60 Ga0495607_0024339 3300046501 Bacteria 3776
61 Ga0495632_0000006 3300046519 Bacteria 345883
62 Ga0495643_0000007 3300046522 Bacteria 383435
63 Ga0495648_0004928 3300046524 Bacteria 11223
64 Ga0495633_0000218 3300046558 Bacteria 71266
65 Ga0495633_0025884 3300046558 Bacteria 2885
66 Ga0495656_0027292 3300046615 Bacteria 2279
67 Ga0495676_0092201 3300047321 Bacteria 2262
68 Ga0496104_0000035 3300048907 Bacteria 181792
69 Ga0496104_0000255 3300048907 Bacteria 47426
70 Ga0496105_0000029 3300048908 Bacteria 139338
71 Ga0496105_0000078 3300048908 Bacteria 74087
72 Ga0496105_0001583 3300048908 Bacteria 16131
73 Ga0496116_0037505 3300048919 Bacteria 3379
74 Ga0496118_0002340 3300048921 Bacteria 25701
75 Ga0496119_0044361 3300048922 Bacteria 2801
76 Ga0496119_0047284 3300048922 Bacteria 2678
77 Ga0496121_0003858 3300048924 Bacteria 20852
78 Ga0496121_0017758 3300048924 Bacteria 7235
79 Ga0496124_0001965 3300048927 Bacteria 28078
80 Ga0496125_0013328 3300048928 Bacteria 8088
81 Ga0501031_0064176 3300049568 Bacteria 2392
82 Ga0501032_0000928 3300049569 Bacteria 23702
83 Ga0501032_0028105 3300049569 Bacteria 3864
84 Ga0501032_0030696 3300049569 Bacteria 3688
85 Ga0501033_0000129 3300049570 Bacteria 73102
86 Ga0501033_0013061 3300049570 Bacteria 6331
87 Ga0501034_0002799 3300049571 Bacteria 20395
88 Ga0501034_0020282 3300049571 Bacteria 6788
89 Ga0501034_0042309 3300049571 Bacteria 4612
90 Ga0501034_0142726 3300049571 Bacteria 2373
91 Ga0501036_0000014 3300049572 Bacteria 148705
92 Ga0501037_0000042 3300049573 Bacteria 118407
93 Ga0501038_0000024 3300049574 Bacteria 148705
94 Ga0501038_0001309 3300049574 Bacteria 22654
95 Ga0501038_0001795 3300049574 Bacteria 19890
96 Ga0501038_0024037 3300049574 Bacteria 5440
97 Ga0501039_0000122 3300049575 Bacteria 53871
98 Ga0501039_0011198 3300049575 Bacteria 6834
99 Ga0501040_0005333 3300049576 Bacteria 8313
100 Ga0501043_0010757 3300049579 Bacteria 7166
101 Ga0501043_0023746 3300049579 Bacteria 4809
102 Ga0501043_0070132 3300049579 Bacteria 2753
103 Ga0501046_0049537 3300049580 Bacteria 3322
104 Ga0501047_0004592 3300049581 Bacteria 12985
105 Ga0501047_0005033 3300049581 Bacteria 12407
106 Ga0501047_0016416 3300049581 Bacteria 7068
107 Ga0501048_0011784 3300049582 Bacteria 6517
108 Ga0501070_0029497 3300049586 Bacteria 4599
109 Ga0501077_0035417 3300049593 Bacteria 3177
110 Ga0501035_0000045 3300049822 Bacteria 148705
111 Ga0501035_0001989 3300049822 Bacteria 20429
112 Ga0501035_0010569 3300049822 Bacteria 8553
113 Ga0501035_0089603 3300049822 Bacteria 2709
114 Ga0501044_0000044 3300049823 Bacteria 148705
115 Ga0501044_0003334 3300049823 Bacteria 18103
116 Ga0501044_0008114 3300049823 Bacteria 11525
117 Ga0501044_0010980 3300049823 Bacteria 9832
118 Ga0501044_0052715 3300049823 Bacteria 4190
119 Ga0501044_0101672 3300049823 Bacteria 2892
120 nmdc:mga03n38_13601_c1 3300050490 Bacteria 3096
121 nmdc:mga06z11_9_c1 3300050494 Bacteria 109982
122 nmdc:mga04h51_12_c1 3300050495 Bacteria 83117
123 nmdc:mga07m45_15689_c1 3300050496 Bacteria 4046
124 Ga0500610_0012835 3300053079 Bacteria 3875
125 Ga0500559_0001523 3300053136 Bacteria 12986
126 Ga0500624_000884 3300053157 Bacteria 6505
127 Ga0500636_0026701 3300053177 Bacteria 3410
128 2513592874 2513237087 Bacteria 5817514
129 2513595441 2513237088 Bacteria 6927906
130 2513651690 2513237095 Bacteria 8976980
131 2513863411 2513237137 Bacteria 9558895
132 2513879177 2513237139 Bacteria 8737671
133 2515630454 2515154112 Bacteria 8294334
134 2517106472 2517093001 Bacteria 9002274
135 2517887633 2517572143 Bacteria 9484767
136 2517889437 2517572143 Bacteria 9484767
137 2524470750 2524023210 Bacteria 9029266
138 2585547031 2585427529 Bacteria 7395659
139 2599936048 2599185301 Bacteria 6161860
140 2643917169 2643221582 Bacteria 5804683
141 2643985680 2643221595 Bacteria 6565519
142 2644413951 2643221674 Bacteria 3919126
143 2644747004 2643221736 Bacteria 6608466
144 2694640174 2693429784 Bacteria 7241525
145 2739348771 2738543031 Bacteria 5769731
146 2756676835 2756170246 Bacteria 7451806
147 2757572733 2757320392 Bacteria 3737298
148 2758642716 2758568016 Bacteria 5645291
149 2774871996 2773857925 Bacteria 6472445
150 2805921604 2802429603 Bacteria 8777136
151 2806053753 2802429634 Bacteria 7083200
152 2806060953 2802429635 Bacteria 7650140
153 2806066748 2802429636 Bacteria 7597525
154 2809062764 2808606401 Bacteria 4586670
155 2809078552 2808606404 Bacteria 4652788
156 2809083153 2808606405 Bacteria 4586632
157 2818239406 2816332527 Bacteria 8933356
158 2824749531 2824746037 Bacteria 7911610
159 2841949089 2841941048 Bacteria 8688029
160 2841957493 2841949485 Bacteria 8680857
161 2841981394 2841974524 Bacteria 8931498
162 2842362948 2842357229 Bacteria 6485165
163 2842694436 2842694124 Bacteria 4063419
164 2844004400 2844002411 Bacteria 7168230
165 2847942833 2847939898 Bacteria 8606328
166 2854912861 2854911287 Bacteria 5582813
167 2854913173 2854911287 Bacteria 5582813
168 2856343081 2856342000 Bacteria 7176905
169 2857349743 2857349434 Bacteria 7926032
170 2871491819 2871488783 Bacteria 6929816
171 2874171290 2874168670 Bacteria 8062617
172 2876370771 2876369609 Bacteria 6807521
173 2878739506 2878738818 Bacteria 7136951
174 2878755980 2878753008 Bacteria 6922523
175 2881163661 2881161766 Bacteria 7127907
176 2881855024 2881853255 Bacteria 6698367
177 2881868739 2881861095 Bacteria 7128710
178 2882460952 2882456835 Bacteria 6863978
179 2882918331 2882912400 Bacteria 6801539
180 2883358106 2883354860 Bacteria 5865246
181 2885320919 2885318864 Bacteria 6729568
182 2885345941 2885342637 Bacteria 7011821
183 2888378650 2888378607 Bacteria 9652610
184 2888378966 2888378607 Bacteria 9652610
185 2889919616 2889914905 Bacteria 5702301
186 2903506236 2903492973 Bacteria 13473544
187 2903769904 2903768456 Bacteria 9749579
188 2906642134 2906635258 Bacteria 8601019
189 2908775637 2908775508 Bacteria 8092255
190 2909399635 2909399089 Bacteria 3922598
191 2909400349 2909399089 Bacteria 3922598
192 2916064031 2916061851 Bacteria 6737736
193 2920766676 2920760137 Bacteria 7427611
194 2924758218 2924754689 Bacteria 6774424
195 2924777030 2924776078 Bacteria 7492003
196 2924791080 2924784321 Bacteria 7416538
197 2928521839 2928521798 Bacteria 4960112
198 2929202870 2929199973 Bacteria 7260745
199 2929623854 2929615660 Bacteria 9193770
200 2933585757 2933577622 Bacteria 9116884
201 2935712839 2935703347 Bacteria 10242284
202 2935713048 2935703347 Bacteria 10242284
203 2935792648 2935785616 Bacteria 7962367
204 2935800672 2935793552 Bacteria 8012592
205 2935982910 2935975950 Bacteria 8347125
206 2936001294 2935992306 Bacteria 9802711
207 2936002014 2935992306 Bacteria 9802711
208 2936055765 2936055302 Bacteria 8785755
209 2936386252 2936381700 Bacteria 7006523
210 2937843871 2937843397 Bacteria 5256375
211 2937880334 2937877337 Bacteria 7246526
212 2941537594 2941531003 Bacteria 7653939
213 2958087470 2958084443 Bacteria 7312792
214 2958151380 2958144490 Bacteria 6677056
215 2960638643 2960637947 Bacteria 7296468
216 2961132373 2961127735 Bacteria 7196641
217 2961174029 2961170736 Bacteria 7072258
218 2964629786 2964628898 Bacteria 7083044
219 2964723090 2964719344 Bacteria 7286602
220 2968005562 2968003550 Bacteria 6929263
221 2968023817 2968016561 Bacteria 7022047
222 2970469858 2970469710 Bacteria 6969209
223 2970506619 2970503327 Bacteria 7099517
224 2977825203 2977821940 Bacteria 6906439
225 2979811265 2979808191 Bacteria 7179355
226 2987636910 2987636660 Bacteria 8088555
227 2987659350 2987652177 Bacteria 6969023
228 3000142210 3000135777 Bacteria 6891109
229 3004171891 3004167301 Bacteria 8330599
230 3004212466 3004211236 Bacteria 7417683
231 3004224179 3004218560 Bacteria 7421728
232 3005717096 3005710791 Bacteria 7622528
233 641336805 641228493 Bacteria 3999591
234 643392314 643348555 Bacteria 3914947
235 8004377570 8004374579 Bacteria 6898112
236 8004400920 8004395343 Bacteria 6620908
237 8004401404 8004395343 Bacteria 6620908
238 8019586519 8019576017 Bacteria 10049540
239 8019592621 8019586578 Bacteria 10212056
240 8019597553 8019586578 Bacteria 10212056
241 8019607702 8019597564 Bacteria 10041141
242 8019619072 8019608314 Bacteria 10042931
243 8019639645 8019638758 Bacteria 9062356
244 8045869163 8045864390 Bacteria 5043873
245 8055743011 8055742211 Bacteria 9226248
246 8055912041 8055909800 Bacteria 7278581
247 Ga0496117_0002878
248 SwRhRL2b_contig_988462
249 JGI25165J46597_1000078
250 Ga0055531_10014570
251 Ga0065704_10070267
252 Ga0068854_100028068
253 Ga0075368_10000215
254 Ga0075363_100045834
255 Ga0075367_10000094
256 Ga0099826_10000025
257 Ga0099826_10000056
258 Ga0105240_10000005
259 Ga0105240_10000024
260 Ga0105239_10025352
261 Ga0157371_10000346
262 Ga0157370_10000163
263 Ga0157370_10000180
264 Ga0214544_1007116
265 Ga0214542_1007023
266 Ga0214545_1006664
267 Ga0214543_1004668
268 Ga0209233_1000150
269 Ga0209758_1003275
270 Ga0209050_1021603
271 Ga0209257_1000490
272 Ga0209257_1005675
273 Ga0207695_10000011
274 Ga0207695_10000036
275 Ga0207640_10019617
276 Ga0209389_1000089
277 Ga0209589_1000148
278 Ga0209589_1000175
279 Ga0209489_113220
280 Ga0209700_100029
281 Ga0209282_1000084
282 Ga0209282_1000299
283 Ga0209813_10000083
284 Ga0268266_10000989
285 Ga0265337_1011855
286 Ga0265338_10000151
287 Ga0265324_10000695
288 Ga0307408_100017434
289 Ga0307408_100018165
290 Ga0265314_10023627
291 Ga0307405_10012776
292 Ga0307412_10017370
293 Ga0315914_1000129
294 Ga0315913_1000034
295 Ga0315915_1000066
296 Ga0373927_0048548
297 Ga0373947_0025499
298 Ga0395899_0000059
299 Ga0395900_0000017
300 Ga0395898_0000030
301 Ga0395905_0000056
302 Ga0395901_0000015
303 Ga0439448_0007720
304 Ga0495638_0000029
305 Ga0495584_0046382
306 Ga0495607_0024339
307 Ga0495632_0000006
308 Ga0495643_0000007
309 Ga0495648_0004928
310 Ga0495633_0000218
311 Ga0495633_0025884
312 Ga0495656_0027292
313 Ga0495676_0092201
314 Ga0496104_0000035
315 Ga0496104_0000255
316 Ga0496105_0000029
317 Ga0496105_0000078
318 Ga0496105_0001583
319 Ga0496116_0037505
320 Ga0496118_0002340
321 Ga0496119_0044361
322 Ga0496119_0047284
323 Ga0496121_0003858
324 Ga0496121_0017758
325 Ga0496124_0001965
326 Ga0496125_0013328
327 Ga0501031_0064176
328 Ga0501032_0000928
329 Ga0501032_0028105
330 Ga0501032_0030696
331 Ga0501033_0000129
332 Ga0501033_0013061
333 Ga0501034_0002799
334 Ga0501034_0020282
335 Ga0501034_0042309
336 Ga0501034_0142726
337 Ga0501036_0000014
338 Ga0501037_0000042
339 Ga0501038_0000024
340 Ga0501038_0001309
341 Ga0501038_0001795
342 Ga0501038_0024037
343 Ga0501039_0000122
344 Ga0501039_0011198
345 Ga0501040_0005333
346 Ga0501043_0010757
347 Ga0501043_0023746
348 Ga0501043_0070132
349 Ga0501046_0049537
350 Ga0501047_0004592
351 Ga0501047_0005033
352 Ga0501047_0016416
353 Ga0501048_0011784
354 Ga0501070_0029497
355 Ga0501077_0035417
356 Ga0501035_0000045
357 Ga0501035_0001989
358 Ga0501035_0010569
359 Ga0501035_0089603
360 Ga0501044_0000044
361 Ga0501044_0003334
362 Ga0501044_0008114
363 Ga0501044_0010980
364 Ga0501044_0052715
365 Ga0501044_0101672
366 nmdc:mga03n38_13601_c1
367 nmdc:mga06z11_9_c1
368 nmdc:mga04h51_12_c1
369 nmdc:mga07m45_15689_c1
370 Ga0500610_0012835
371 Ga0500559_0001523
372 Ga0500624_000884
373 Ga0500636_0026701
374 2513592874
375 2513595441
376 2513651690
377 2513863411
378 2513879177
379 2515630454
380 2517106472
381 2517887633
382 2517889437
383 2524470750
384 2585547031
385 2599936048
386 2643917169
387 2643985680
388 2644413951
389 2644747004
390 2694640174
391 2739348771
392 2756676835
393 2757572733
394 2758642716
395 2774871996
396 2805921604
397 2806053753
398 2806060953
399 2806066748
400 2809062764
401 2809078552
402 2809083153
403 2818239406
404 2824749531
405 2841949089
406 2841957493
407 2841981394
408 2842362948
409 2842694436
410 2844004400
411 2847942833
412 2854912861
413 2854913173
414 2856343081
415 2857349743
416 2871491819
417 2874171290
418 2876370771
419 2878739506
420 2878755980
421 2881163661
422 2881855024
423 2881868739
424 2882460952
425 2882918331
426 2883358106
427 2885320919
428 2885345941
429 2888378650
430 2888378966
431 2889919616
432 2903506236
433 2903769904
434 2906642134
435 2908775637
436 2909399635
437 2909400349
438 2916064031
439 2920766676
440 2924758218
441 2924777030
442 2924791080
443 2928521839
444 2929202870
445 2929623854
446 2933585757
447 2935712839
448 2935713048
449 2935792648
450 2935800672
451 2935982910
452 2936001294
453 2936002014
454 2936055765
455 2936386252
456 2937843871
457 2937880334
458 2941537594
459 2958087470
460 2958151380
461 2960638643
462 2961132373
463 2961174029
464 2964629786
465 2964723090
466 2968005562
467 2968023817
468 2970469858
469 2970506619
470 2977825203
471 2979811265
472 2987636910
473 2987659350
474 3000142210
475 3004171891
476 3004212466
477 3004224179
478 3005717096
479 641336805
480 643392314
481 8004377570
482 8004400920
483 8004401404
484 8019586519
485 8019592621
486 8019597553
487 8019607702
488 8019619072
489 8019639645
490 8045869163
491 8055743011
492 8055912041

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11843

DUF3363

Protein of unknown function (DUF3363)

410

591

0.98

PF11843

DUF3363

Protein of unknown function (DUF3363)

290

416

0.96

PF03432

Relaxase

MobA/VirD2-like, nuclease domain

140

236

0.83

Map