F358657
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 247 | 169 | 494 | 365 |
Family's Representative Sequence
| Representative Sequence | 3300002076|JGI24749J21850_1000101|JGI24749J21850_10001012 |
| Length | 395 |
| Sequence | MIRATTTPVSMRPDAGDSMLAIGLMSGTSLDGIDAALIETDGAEHIRPIAFRSDPYSAPARAQLREAAALALSFERPRASPPILAAEEMLTNRHVLAVRQLLAAVALTPADISVIGFHGQTIAHRPDRGWTWQIGDGAAMARALGITVVDDLRSADVAAGGQGAPLLPVYHRALTAGMDLPVAVLNLGGVANITWLGRADEDLIAFDTGPANGLIDDWMLAETGSPYDAGGAFAARGTVDRSVLGGMLDNRWFDLPPPKSLDRADFTIEAARGLAAADGAATLTAFTAETVALALRHLPEPPGRLIVAGGGRHNPTLMRMITAAARITAEPIEALGWNGDATEAEGFAYMAVRALRGAPISFPGTTGVPRPMTGGVIHRPSPASGRPPGEAMTGR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002076 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 | Metagenome | Rhizosphere |
| 2 | 3300001915 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 | Metagenome | Rhizosphere |
| 3 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 4 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 5 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 6 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 7 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 8 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 9 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 18 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 20 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 21 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 22 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 23 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 24 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 25 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 26 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 27 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 30 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 31 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 32 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 33 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009978 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG | Metagenome | Rhizosphere |
| 39 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300015690 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 | Metagenome | Rhizosphere |
| 45 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 46 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300028016 | Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 | Metagenome | Rhizosphere |
| 70 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 73 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 74 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 75 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 76 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 77 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 78 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 79 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 80 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 105 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 106 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 107 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 109 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 110 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 111 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 112 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 113 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 114 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 115 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 116 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 117 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 118 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 119 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 120 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300049515 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought | Metagenome | Rhizosphere |
| 122 | 3300049517 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control | Metagenome | Rhizosphere |
| 123 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 126 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 127 | 3300049679 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought | Metagenome | Rhizosphere |
| 128 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 129 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 130 | 3300049775 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought | Metagenome | Rhizosphere |
| 131 | 3300049776 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought | Metagenome | Rhizosphere |
| 132 | 3300049777 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control | Metagenome | Rhizosphere |
| 133 | 3300049778 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control | Metagenome | Rhizosphere |
| 134 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 135 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 136 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 137 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 138 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 140 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 141 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 142 | 3300053116 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere | Metagenome | Endosphere |
| 143 | 3300053120 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere | Metagenome | Endosphere |
| 144 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 145 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 146 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 147 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 148 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 149 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 150 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 151 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 152 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 153 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 154 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 155 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 156 | 2582581305 | Rhizorhabdus wittichii YR128 | Isolate | Rhizosphere |
| 157 | 2643221541 | Sphingomonas sp. Root50 | Isolate | Unclassified |
| 158 | 2643221605 | Sphingomonas sp. Root710 | Isolate | Unclassified |
| 159 | 2643221606 | Sphingomonas sp. Root720 | Isolate | Unclassified |
| 160 | 2643221671 | Sphingomonas sp. Root1294 | Isolate | Unclassified |
| 161 | 2775507255 | Sphingobium indicum B90A | Isolate | Rhizosphere |
| 162 | 2808606401 | Sphingobium sp. AEW010 | Isolate | Rhizosphere |
| 163 | 2808606404 | Sphingobium sp. AEW013 | Isolate | Rhizosphere |
| 164 | 2808606405 | Sphingobium sp. AEW001 | Isolate | Rhizosphere |
| 165 | 2830075706 | Sphingomonas jinjuensis DSM 21457 | Isolate | Rhizosphere |
| 166 | 2880518877 | Sphingobium sp. JAI105 | Isolate | Rhizosphere |
| 167 | 2919709256 | Sphingobium xenophagum 4256 | Isolate | Unclassified |
| 168 | 2990265787 | Sphingomonas sp. SORGH_AS802 | Isolate | Aerial Root |
| 169 | 2993693658 | Sphingomonas sp. SORGH_AS438 | Isolate | Aerial Root |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.33 |
| Metatranscriptomes | 0 |
| Isolates | 5.67 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.81 |
| Bulb | 0 |
| Endosphere | 12.55 |
| Nodule | 0 |
| Rhizoplane | 2.43 |
| Rhizosphere | 72.87 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24749J21850_1000101 | 3300002076 | Bacteria | 14836 |
| 2 | JGI24741J21665_1000021 | 3300001915 | Bacteria | 37608 |
| 3 | JGI24739J22299_10006006 | 3300001989 | Bacteria | 4596 |
| 4 | JGI24737J22298_10003826 | 3300001990 | Bacteria | 5293 |
| 5 | JGI24735J21928_10007305 | 3300002067 | Bacteria | 3606 |
| 6 | JGI24751J29686_10000169 | 3300002459 | Bacteria | 30266 |
| 7 | Ga0055532_1003760 | 3300003758 | Bacteria | 2474 |
| 8 | Ga0065704_10003433 | 3300005289 | Bacteria | 6640 |
| 9 | Ga0065707_10013988 | 3300005295 | Bacteria | 1578 |
| 10 | Ga0065707_10116791 | 3300005295 | Bacteria | 2227 |
| 11 | Ga0070670_100000003 | 3300005331 | Bacteria | 529510 |
| 12 | Ga0070670_100003793 | 3300005331 | Bacteria | 12586 |
| 13 | Ga0070670_100111138 | 3300005331 | Bacteria | 2361 |
| 14 | Ga0070666_10034691 | 3300005335 | Bacteria | 3343 |
| 15 | Ga0070666_10082265 | 3300005335 | Bacteria | 2202 |
| 16 | Ga0070661_100018215 | 3300005344 | Bacteria | 4990 |
| 17 | Ga0070668_100000113 | 3300005347 | Bacteria | 50427 |
| 18 | Ga0070668_100004203 | 3300005347 | Bacteria | 10674 |
| 19 | Ga0070668_100049759 | 3300005347 | Bacteria | 3225 |
| 20 | Ga0070669_100000044 | 3300005353 | Bacteria | 121087 |
| 21 | Ga0070669_100032999 | 3300005353 | Bacteria | 3742 |
| 22 | Ga0070669_100091145 | 3300005353 | Bacteria | 2286 |
| 23 | Ga0070671_100003414 | 3300005355 | Bacteria | 12392 |
| 24 | Ga0070671_100012643 | 3300005355 | Bacteria | 6803 |
| 25 | Ga0070671_100285831 | 3300005355 | Bacteria | 1403 |
| 26 | Ga0070667_100000009 | 3300005367 | Bacteria | 281488 |
| 27 | Ga0070667_100000036 | 3300005367 | Bacteria | 172536 |
| 28 | Ga0070667_100000062 | 3300005367 | Bacteria | 143729 |
| 29 | Ga0070667_100002353 | 3300005367 | Bacteria | 16553 |
| 30 | Ga0068853_100328646 | 3300005539 | Bacteria | 1418 |
| 31 | Ga0070665_100219740 | 3300005548 | Bacteria | 1900 |
| 32 | Ga0068855_100108121 | 3300005563 | Bacteria | 3194 |
| 33 | Ga0068857_100239684 | 3300005577 | Bacteria | 1660 |
| 34 | Ga0068854_100050357 | 3300005578 | Bacteria | 2980 |
| 35 | Ga0068856_100006484 | 3300005614 | Bacteria | 11474 |
| 36 | Ga0068859_100003304 | 3300005617 | Bacteria | 16408 |
| 37 | Ga0068859_100026665 | 3300005617 | Bacteria | 5795 |
| 38 | Ga0068864_100000148 | 3300005618 | Bacteria | 66302 |
| 39 | Ga0068864_100045357 | 3300005618 | Bacteria | 3771 |
| 40 | Ga0068861_100013165 | 3300005719 | Bacteria | 5786 |
| 41 | Ga0068863_100000038 | 3300005841 | Bacteria | 161477 |
| 42 | Ga0068863_100003210 | 3300005841 | Bacteria | 16183 |
| 43 | Ga0068863_100012830 | 3300005841 | Bacteria | 8082 |
| 44 | Ga0068863_100059541 | 3300005841 | Bacteria | 3613 |
| 45 | Ga0068858_100001033 | 3300005842 | Bacteria | 28756 |
| 46 | Ga0068860_100000063 | 3300005843 | Bacteria | 189519 |
| 47 | Ga0068860_100000193 | 3300005843 | Bacteria | 97253 |
| 48 | Ga0068862_100000001 | 3300005844 | Bacteria | 523031 |
| 49 | Ga0068862_100000420 | 3300005844 | Bacteria | 45999 |
| 50 | Ga0068862_100021981 | 3300005844 | Bacteria | 5336 |
| 51 | Ga0068862_100035986 | 3300005844 | Bacteria | 4194 |
| 52 | Ga0075368_10000583 | 3300006042 | Bacteria | 10981 |
| 53 | Ga0075363_100012946 | 3300006048 | Bacteria | 4029 |
| 54 | Ga0075367_10004274 | 3300006178 | Bacteria | 6945 |
| 55 | Ga0097620_100003304 | 3300006931 | Bacteria | 16408 |
| 56 | Ga0097620_100026665 | 3300006931 | Bacteria | 5795 |
| 57 | Ga0105240_10000206 | 3300009093 | Bacteria | 119835 |
| 58 | Ga0114129_10116309 | 3300009147 | Bacteria | 3685 |
| 59 | Ga0105248_10006642 | 3300009177 | Bacteria | 12687 |
| 60 | Ga0105248_10120567 | 3300009177 | Bacteria | 2959 |
| 61 | Ga0105237_10012290 | 3300009545 | Bacteria | 9022 |
| 62 | Ga0105148_100319 | 3300009978 | Bacteria | 6151 |
| 63 | Ga0105239_10000367 | 3300010375 | Bacteria | 66191 |
| 64 | Ga0157373_10032749 | 3300013100 | Bacteria | 3741 |
| 65 | Ga0157370_10020748 | 3300013104 | Bacteria | 6557 |
| 66 | Ga0157369_10316117 | 3300013105 | Bacteria | 1624 |
| 67 | Ga0157380_10000199 | 3300014326 | Bacteria | 35164 |
| 68 | Ga0183363_1005 | 3300015690 | Bacteria | 403020 |
| 69 | Ga0213875_10000375 | 3300021388 | Bacteria | 41005 |
| 70 | Ga0209147_101560 | 3300025229 | Bacteria | 7828 |
| 71 | Ga0207680_10070488 | 3300025903 | Bacteria | 2164 |
| 72 | Ga0207680_10101854 | 3300025903 | Bacteria | 1847 |
| 73 | Ga0207647_10001521 | 3300025904 | Bacteria | 17821 |
| 74 | Ga0207695_10000340 | 3300025913 | Bacteria | 110235 |
| 75 | Ga0207695_10267431 | 3300025913 | Bacteria | 1606 |
| 76 | Ga0207671_10015235 | 3300025914 | Bacteria | 6036 |
| 77 | Ga0207681_10000041 | 3300025923 | Bacteria | 140201 |
| 78 | Ga0207681_10011364 | 3300025923 | Bacteria | 5473 |
| 79 | Ga0207694_10013259 | 3300025924 | Bacteria | 6206 |
| 80 | Ga0207650_10000004 | 3300025925 | Bacteria | 743372 |
| 81 | Ga0207650_10005149 | 3300025925 | Bacteria | 8924 |
| 82 | Ga0207650_10259615 | 3300025925 | Bacteria | 1409 |
| 83 | Ga0207644_10000149 | 3300025931 | Bacteria | 50342 |
| 84 | Ga0207644_10035114 | 3300025931 | Bacteria | 3511 |
| 85 | Ga0207644_10205949 | 3300025931 | Bacteria | 1553 |
| 86 | Ga0207706_10139412 | 3300025933 | Bacteria | 2133 |
| 87 | Ga0207711_10000658 | 3300025941 | Bacteria | 34432 |
| 88 | Ga0207711_10007262 | 3300025941 | Bacteria | 9283 |
| 89 | Ga0207667_10425548 | 3300025949 | Bacteria | 1351 |
| 90 | Ga0207668_10000153 | 3300025972 | Bacteria | 47612 |
| 91 | Ga0207668_10001146 | 3300025972 | Bacteria | 15770 |
| 92 | Ga0207668_10067692 | 3300025972 | Bacteria | 2536 |
| 93 | Ga0207658_10000009 | 3300025986 | Bacteria | 264118 |
| 94 | Ga0207658_10000039 | 3300025986 | Bacteria | 143707 |
| 95 | Ga0207658_10000444 | 3300025986 | Bacteria | 38999 |
| 96 | Ga0207658_10002233 | 3300025986 | Bacteria | 14373 |
| 97 | Ga0207703_10001823 | 3300026035 | Bacteria | 19006 |
| 98 | Ga0207639_10008890 | 3300026041 | Bacteria | 6910 |
| 99 | Ga0207639_10181760 | 3300026041 | Bacteria | 1789 |
| 100 | Ga0207678_10001360 | 3300026067 | Bacteria | 22535 |
| 101 | Ga0207702_10014615 | 3300026078 | Bacteria | 6516 |
| 102 | Ga0207641_10000060 | 3300026088 | Bacteria | 161514 |
| 103 | Ga0207641_10001116 | 3300026088 | Bacteria | 27005 |
| 104 | Ga0207641_10001662 | 3300026088 | Bacteria | 21693 |
| 105 | Ga0207676_10000006 | 3300026095 | Bacteria | 681936 |
| 106 | Ga0207676_10034741 | 3300026095 | Bacteria | 3818 |
| 107 | Ga0207674_10016462 | 3300026116 | Bacteria | 8091 |
| 108 | Ga0207674_10183141 | 3300026116 | Bacteria | 2045 |
| 109 | Ga0207675_100000767 | 3300026118 | Bacteria | 31990 |
| 110 | Ga0209813_10000235 | 3300027866 | Bacteria | 16676 |
| 111 | Ga0265354_1000974 | 3300028016 | Bacteria | 4504 |
| 112 | Ga0268265_10000001 | 3300028380 | Bacteria | 1230727 |
| 113 | Ga0268265_10000409 | 3300028380 | Bacteria | 46033 |
| 114 | Ga0268264_10000001 | 3300028381 | Bacteria | 1221000 |
| 115 | Ga0268264_10000083 | 3300028381 | Bacteria | 245366 |
| 116 | Ga0268264_10052013 | 3300028381 | Bacteria | 3415 |
| 117 | Ga0307406_10007181 | 3300031901 | Bacteria | 6171 |
| 118 | Ga0307412_10047571 | 3300031911 | Bacteria | 2818 |
| 119 | Ga0307412_10328052 | 3300031911 | Bacteria | 1220 |
| 120 | Ga0307409_100316615 | 3300031995 | Bacteria | 1458 |
| 121 | Ga0307416_100010441 | 3300032002 | Bacteria | 6132 |
| 122 | Ga0307411_10033845 | 3300032005 | Bacteria | 3173 |
| 123 | Ga0373947_0035264 | 3300035725 | Bacteria | 2962 |
| 124 | Ga0436364_0167314 | 3300037853 | Bacteria | 105007 |
| 125 | Ga0466968_0044520 | 3300044735 | Bacteria | 1881 |
| 126 | Ga0495617_051169 | 3300046452 | Bacteria | 1373 |
| 127 | Ga0495627_000193 | 3300046453 | Bacteria | 67253 |
| 128 | Ga0495627_000248 | 3300046453 | Bacteria | 56262 |
| 129 | Ga0495638_0000022 | 3300046460 | Bacteria | 364765 |
| 130 | Ga0495638_0103416 | 3300046460 | Bacteria | 1700 |
| 131 | Ga0495650_0015741 | 3300046471 | Bacteria | 3867 |
| 132 | Ga0495584_0058968 | 3300046491 | Bacteria | 1931 |
| 133 | Ga0495583_0000401 | 3300046506 | Bacteria | 65722 |
| 134 | Ga0495583_0000454 | 3300046506 | Bacteria | 61235 |
| 135 | Ga0495606_0003798 | 3300046507 | Bacteria | 15691 |
| 136 | Ga0495610_0000587 | 3300046512 | Bacteria | 36067 |
| 137 | Ga0495616_0000007 | 3300046513 | Bacteria | 227689 |
| 138 | Ga0495632_0000049 | 3300046519 | Bacteria | 134597 |
| 139 | Ga0495632_0031759 | 3300046519 | Bacteria | 2727 |
| 140 | Ga0495637_0004018 | 3300046520 | Bacteria | 7679 |
| 141 | Ga0495637_0010631 | 3300046520 | Bacteria | 4445 |
| 142 | Ga0495643_0000047 | 3300046522 | Bacteria | 217914 |
| 143 | Ga0495643_0064363 | 3300046522 | Bacteria | 1937 |
| 144 | Ga0495648_0000051 | 3300046524 | Bacteria | 162502 |
| 145 | Ga0495648_0011584 | 3300046524 | Bacteria | 6630 |
| 146 | Ga0495663_0000009 | 3300046525 | Bacteria | 256308 |
| 147 | Ga0495654_0017336 | 3300046530 | Bacteria | 3789 |
| 148 | Ga0495597_0005564 | 3300046542 | Bacteria | 6652 |
| 149 | Ga0495633_0001277 | 3300046558 | Bacteria | 19975 |
| 150 | Ga0495633_0005712 | 3300046558 | Bacteria | 7521 |
| 151 | Ga0495633_0069412 | 3300046558 | Bacteria | 1645 |
| 152 | Ga0495668_0011414 | 3300046616 | Bacteria | 5318 |
| 153 | Ga0495668_0043302 | 3300046616 | Bacteria | 2504 |
| 154 | Ga0495661_0038140 | 3300046665 | Bacteria | 2996 |
| 155 | Ga0495671_0000004 | 3300046692 | Bacteria | 545630 |
| 156 | Ga0495671_0000038 | 3300046692 | Bacteria | 173693 |
| 157 | Ga0495671_0089208 | 3300046692 | Bacteria | 1510 |
| 158 | Ga0495660_0065140 | 3300046810 | Bacteria | 1946 |
| 159 | Ga0495673_0000021 | 3300047469 | Bacteria | 545523 |
| 160 | Ga0495673_0031714 | 3300047469 | Bacteria | 2472 |
| 161 | Ga0495681_0000032 | 3300047470 | Bacteria | 127415 |
| 162 | Ga0495681_0006429 | 3300047470 | Bacteria | 7727 |
| 163 | Ga0495686_0001220 | 3300047472 | Bacteria | 29446 |
| 164 | Ga0496102_0001717 | 3300048905 | Bacteria | 19162 |
| 165 | Ga0496103_0001064 | 3300048906 | Bacteria | 19155 |
| 166 | Ga0496108_0039512 | 3300048911 | Bacteria | 3933 |
| 167 | Ga0496109_0015427 | 3300048912 | Bacteria | 6658 |
| 168 | Ga0496110_0255733 | 3300048913 | Bacteria | 1594 |
| 169 | Ga0496113_0008753 | 3300048916 | Bacteria | 6609 |
| 170 | Ga0496116_0003047 | 3300048919 | Bacteria | 16943 |
| 171 | Ga0496116_0014837 | 3300048919 | Bacteria | 6193 |
| 172 | Ga0496116_0093593 | 3300048919 | Bacteria | 1819 |
| 173 | Ga0496117_0003241 | 3300048920 | Bacteria | 19161 |
| 174 | Ga0496117_0006983 | 3300048920 | Bacteria | 11190 |
| 175 | Ga0496117_0016941 | 3300048920 | Bacteria | 6109 |
| 176 | Ga0496118_0001677 | 3300048921 | Bacteria | 32432 |
| 177 | Ga0496118_0003630 | 3300048921 | Bacteria | 19161 |
| 178 | Ga0496118_0016364 | 3300048921 | Bacteria | 6807 |
| 179 | Ga0496119_0027644 | 3300048922 | Bacteria | 3893 |
| 180 | Ga0496121_0000208 | 3300048924 | Bacteria | 129753 |
| 181 | Ga0496122_0000931 | 3300048925 | Bacteria | 53413 |
| 182 | Ga0496122_0011375 | 3300048925 | Bacteria | 9021 |
| 183 | Ga0496123_0004534 | 3300048926 | Bacteria | 14503 |
| 184 | Ga0496123_0066211 | 3300048926 | Bacteria | 2290 |
| 185 | Ga0496124_0003482 | 3300048927 | Bacteria | 19161 |
| 186 | Ga0496124_0011927 | 3300048927 | Bacteria | 8648 |
| 187 | Ga0496124_0299310 | 3300048927 | Bacteria | 1163 |
| 188 | Ga0496125_0035637 | 3300048928 | Bacteria | 4359 |
| 189 | Ga0496125_0112055 | 3300048928 | Bacteria | 1972 |
| 190 | Ga0496126_0009205 | 3300048929 | Bacteria | 10535 |
| 191 | Ga0495682_0029793 | 3300049460 | Bacteria | 2022 |
| 192 | Ga0501292_000060 | 3300049515 | Bacteria | 22123 |
| 193 | Ga0501294_000652 | 3300049517 | Bacteria | 3917 |
| 194 | Ga0501032_0038131 | 3300049569 | Bacteria | 3274 |
| 195 | Ga0501047_0003781 | 3300049581 | Bacteria | 14248 |
| 196 | Ga0501222_000281 | 3300049662 | Bacteria | 8254 |
| 197 | Ga0501223_000048 | 3300049663 | Bacteria | 41037 |
| 198 | Ga0501223_002825 | 3300049663 | Bacteria | 3806 |
| 199 | Ga0501249_000456 | 3300049679 | Bacteria | 10190 |
| 200 | Ga0501261_000139 | 3300049690 | Bacteria | 10735 |
| 201 | Ga0501225_0000159 | 3300049705 | Bacteria | 20527 |
| 202 | Ga0501225_0010476 | 3300049705 | Bacteria | 2625 |
| 203 | Ga0501225_0022218 | 3300049705 | Bacteria | 1751 |
| 204 | Ga0501279_000031 | 3300049775 | Bacteria | 36314 |
| 205 | Ga0501280_000036 | 3300049776 | Bacteria | 38817 |
| 206 | Ga0501281_00059 | 3300049777 | Bacteria | 13023 |
| 207 | Ga0501282_000192 | 3300049778 | Bacteria | 7514 |
| 208 | nmdc:mga03n38_65296_c1 | 3300050490 | Bacteria | 1668 |
| 209 | nmdc:mga00v17_64650_c1 | 3300050491 | Bacteria | 2254 |
| 210 | nmdc:mga06z11_383_c1 | 3300050494 | Bacteria | 16678 |
| 211 | nmdc:mga04h51_90_c1 | 3300050495 | Bacteria | 28105 |
| 212 | nmdc:mga05p37_73602_c1 | 3300050507 | Bacteria | 3640 |
| 213 | Ga0500643_000585 | 3300053087 | Bacteria | 25189 |
| 214 | Ga0500555_000104 | 3300053103 | Bacteria | 40276 |
| 215 | Ga0500562_007180 | 3300053108 | Bacteria | 2812 |
| 216 | Ga0500592_000195 | 3300053116 | Bacteria | 11538 |
| 217 | Ga0500597_000466 | 3300053120 | Bacteria | 8598 |
| 218 | Ga0500618_016342 | 3300053125 | Bacteria | 1859 |
| 219 | Ga0500642_0003628 | 3300053130 | Bacteria | 4696 |
| 220 | Ga0500655_000164 | 3300053133 | Bacteria | 16318 |
| 221 | Ga0500559_0019555 | 3300053136 | Bacteria | 2861 |
| 222 | Ga0500559_0025867 | 3300053136 | Bacteria | 2498 |
| 223 | Ga0500559_0049887 | 3300053136 | Bacteria | 1845 |
| 224 | Ga0500573_0000016 | 3300053140 | Bacteria | 182675 |
| 225 | Ga0500590_010418 | 3300053148 | Bacteria | 4696 |
| 226 | Ga0500604_0001238 | 3300053151 | Bacteria | 7120 |
| 227 | Ga0500622_0021213 | 3300053156 | Bacteria | 3450 |
| 228 | Ga0500624_000015 | 3300053157 | Bacteria | 161928 |
| 229 | Ga0500624_000022 | 3300053157 | Bacteria | 116892 |
| 230 | Ga0500627_0000144 | 3300053158 | Bacteria | 20890 |
| 231 | Ga0500627_0000574 | 3300053158 | Bacteria | 9893 |
| 232 | Ga0500637_0000558 | 3300053178 | Bacteria | 14588 |
| 233 | Ga0500661_000079 | 3300055283 | Bacteria | 15284 |
| 234 | 2585262397 | 2582581305 | Bacteria | 4895574 |
| 235 | 2643729180 | 2643221541 | Bacteria | 5498788 |
| 236 | 2644038665 | 2643221605 | Bacteria | 4772303 |
| 237 | 2644045192 | 2643221606 | Bacteria | 5588032 |
| 238 | 2644391365 | 2643221671 | Bacteria | 5496681 |
| 239 | 2778123719 | 2775507255 | Bacteria | 3945731 |
| 240 | 2809064725 | 2808606401 | Bacteria | 4586670 |
| 241 | 2809080606 | 2808606404 | Bacteria | 4652788 |
| 242 | 2809084971 | 2808606405 | Bacteria | 4586632 |
| 243 | 2830077099 | 2830075706 | Bacteria | 3855215 |
| 244 | 2880519619 | 2880518877 | Bacteria | 5012590 |
| 245 | 2919710601 | 2919709256 | Bacteria | 4318106 |
| 246 | 2990267431 | 2990265787 | Bacteria | 3943888 |
| 247 | 2993695334 | 2993693658 | Bacteria | 4040749 |
| 248 | JGI24749J21850_1000101 | |||
| 249 | JGI24741J21665_1000021 | |||
| 250 | JGI24739J22299_10006006 | |||
| 251 | JGI24737J22298_10003826 | |||
| 252 | JGI24735J21928_10007305 | |||
| 253 | JGI24751J29686_10000169 | |||
| 254 | Ga0055532_1003760 | |||
| 255 | Ga0065704_10003433 | |||
| 256 | Ga0065707_10013988 | |||
| 257 | Ga0065707_10116791 | |||
| 258 | Ga0070670_100000003 | |||
| 259 | Ga0070670_100003793 | |||
| 260 | Ga0070670_100111138 | |||
| 261 | Ga0070666_10034691 | |||
| 262 | Ga0070666_10082265 | |||
| 263 | Ga0070661_100018215 | |||
| 264 | Ga0070668_100000113 | |||
| 265 | Ga0070668_100004203 | |||
| 266 | Ga0070668_100049759 | |||
| 267 | Ga0070669_100000044 | |||
| 268 | Ga0070669_100032999 | |||
| 269 | Ga0070669_100091145 | |||
| 270 | Ga0070671_100003414 | |||
| 271 | Ga0070671_100012643 | |||
| 272 | Ga0070671_100285831 | |||
| 273 | Ga0070667_100000009 | |||
| 274 | Ga0070667_100000036 | |||
| 275 | Ga0070667_100000062 | |||
| 276 | Ga0070667_100002353 | |||
| 277 | Ga0068853_100328646 | |||
| 278 | Ga0070665_100219740 | |||
| 279 | Ga0068855_100108121 | |||
| 280 | Ga0068857_100239684 | |||
| 281 | Ga0068854_100050357 | |||
| 282 | Ga0068856_100006484 | |||
| 283 | Ga0068859_100003304 | |||
| 284 | Ga0068859_100026665 | |||
| 285 | Ga0068864_100000148 | |||
| 286 | Ga0068864_100045357 | |||
| 287 | Ga0068861_100013165 | |||
| 288 | Ga0068863_100000038 | |||
| 289 | Ga0068863_100003210 | |||
| 290 | Ga0068863_100012830 | |||
| 291 | Ga0068863_100059541 | |||
| 292 | Ga0068858_100001033 | |||
| 293 | Ga0068860_100000063 | |||
| 294 | Ga0068860_100000193 | |||
| 295 | Ga0068862_100000001 | |||
| 296 | Ga0068862_100000420 | |||
| 297 | Ga0068862_100021981 | |||
| 298 | Ga0068862_100035986 | |||
| 299 | Ga0075368_10000583 | |||
| 300 | Ga0075363_100012946 | |||
| 301 | Ga0075367_10004274 | |||
| 302 | Ga0097620_100003304 | |||
| 303 | Ga0097620_100026665 | |||
| 304 | Ga0105240_10000206 | |||
| 305 | Ga0114129_10116309 | |||
| 306 | Ga0105248_10006642 | |||
| 307 | Ga0105248_10120567 | |||
| 308 | Ga0105237_10012290 | |||
| 309 | Ga0105148_100319 | |||
| 310 | Ga0105239_10000367 | |||
| 311 | Ga0157373_10032749 | |||
| 312 | Ga0157370_10020748 | |||
| 313 | Ga0157369_10316117 | |||
| 314 | Ga0157380_10000199 | |||
| 315 | Ga0183363_1005 | |||
| 316 | Ga0213875_10000375 | |||
| 317 | Ga0209147_101560 | |||
| 318 | Ga0207680_10070488 | |||
| 319 | Ga0207680_10101854 | |||
| 320 | Ga0207647_10001521 | |||
| 321 | Ga0207695_10000340 | |||
| 322 | Ga0207695_10267431 | |||
| 323 | Ga0207671_10015235 | |||
| 324 | Ga0207681_10000041 | |||
| 325 | Ga0207681_10011364 | |||
| 326 | Ga0207694_10013259 | |||
| 327 | Ga0207650_10000004 | |||
| 328 | Ga0207650_10005149 | |||
| 329 | Ga0207650_10259615 | |||
| 330 | Ga0207644_10000149 | |||
| 331 | Ga0207644_10035114 | |||
| 332 | Ga0207644_10205949 | |||
| 333 | Ga0207706_10139412 | |||
| 334 | Ga0207711_10000658 | |||
| 335 | Ga0207711_10007262 | |||
| 336 | Ga0207667_10425548 | |||
| 337 | Ga0207668_10000153 | |||
| 338 | Ga0207668_10001146 | |||
| 339 | Ga0207668_10067692 | |||
| 340 | Ga0207658_10000009 | |||
| 341 | Ga0207658_10000039 | |||
| 342 | Ga0207658_10000444 | |||
| 343 | Ga0207658_10002233 | |||
| 344 | Ga0207703_10001823 | |||
| 345 | Ga0207639_10008890 | |||
| 346 | Ga0207639_10181760 | |||
| 347 | Ga0207678_10001360 | |||
| 348 | Ga0207702_10014615 | |||
| 349 | Ga0207641_10000060 | |||
| 350 | Ga0207641_10001116 | |||
| 351 | Ga0207641_10001662 | |||
| 352 | Ga0207676_10000006 | |||
| 353 | Ga0207676_10034741 | |||
| 354 | Ga0207674_10016462 | |||
| 355 | Ga0207674_10183141 | |||
| 356 | Ga0207675_100000767 | |||
| 357 | Ga0209813_10000235 | |||
| 358 | Ga0265354_1000974 | |||
| 359 | Ga0268265_10000001 | |||
| 360 | Ga0268265_10000409 | |||
| 361 | Ga0268264_10000001 | |||
| 362 | Ga0268264_10000083 | |||
| 363 | Ga0268264_10052013 | |||
| 364 | Ga0307406_10007181 | |||
| 365 | Ga0307412_10047571 | |||
| 366 | Ga0307412_10328052 | |||
| 367 | Ga0307409_100316615 | |||
| 368 | Ga0307416_100010441 | |||
| 369 | Ga0307411_10033845 | |||
| 370 | Ga0373947_0035264 | |||
| 371 | Ga0436364_0167314 | |||
| 372 | Ga0466968_0044520 | |||
| 373 | Ga0495617_051169 | |||
| 374 | Ga0495627_000193 | |||
| 375 | Ga0495627_000248 | |||
| 376 | Ga0495638_0000022 | |||
| 377 | Ga0495638_0103416 | |||
| 378 | Ga0495650_0015741 | |||
| 379 | Ga0495584_0058968 | |||
| 380 | Ga0495583_0000401 | |||
| 381 | Ga0495583_0000454 | |||
| 382 | Ga0495606_0003798 | |||
| 383 | Ga0495610_0000587 | |||
| 384 | Ga0495616_0000007 | |||
| 385 | Ga0495632_0000049 | |||
| 386 | Ga0495632_0031759 | |||
| 387 | Ga0495637_0004018 | |||
| 388 | Ga0495637_0010631 | |||
| 389 | Ga0495643_0000047 | |||
| 390 | Ga0495643_0064363 | |||
| 391 | Ga0495648_0000051 | |||
| 392 | Ga0495648_0011584 | |||
| 393 | Ga0495663_0000009 | |||
| 394 | Ga0495654_0017336 | |||
| 395 | Ga0495597_0005564 | |||
| 396 | Ga0495633_0001277 | |||
| 397 | Ga0495633_0005712 | |||
| 398 | Ga0495633_0069412 | |||
| 399 | Ga0495668_0011414 | |||
| 400 | Ga0495668_0043302 | |||
| 401 | Ga0495661_0038140 | |||
| 402 | Ga0495671_0000004 | |||
| 403 | Ga0495671_0000038 | |||
| 404 | Ga0495671_0089208 | |||
| 405 | Ga0495660_0065140 | |||
| 406 | Ga0495673_0000021 | |||
| 407 | Ga0495673_0031714 | |||
| 408 | Ga0495681_0000032 | |||
| 409 | Ga0495681_0006429 | |||
| 410 | Ga0495686_0001220 | |||
| 411 | Ga0496102_0001717 | |||
| 412 | Ga0496103_0001064 | |||
| 413 | Ga0496108_0039512 | |||
| 414 | Ga0496109_0015427 | |||
| 415 | Ga0496110_0255733 | |||
| 416 | Ga0496113_0008753 | |||
| 417 | Ga0496116_0003047 | |||
| 418 | Ga0496116_0014837 | |||
| 419 | Ga0496116_0093593 | |||
| 420 | Ga0496117_0003241 | |||
| 421 | Ga0496117_0006983 | |||
| 422 | Ga0496117_0016941 | |||
| 423 | Ga0496118_0001677 | |||
| 424 | Ga0496118_0003630 | |||
| 425 | Ga0496118_0016364 | |||
| 426 | Ga0496119_0027644 | |||
| 427 | Ga0496121_0000208 | |||
| 428 | Ga0496122_0000931 | |||
| 429 | Ga0496122_0011375 | |||
| 430 | Ga0496123_0004534 | |||
| 431 | Ga0496123_0066211 | |||
| 432 | Ga0496124_0003482 | |||
| 433 | Ga0496124_0011927 | |||
| 434 | Ga0496124_0299310 | |||
| 435 | Ga0496125_0035637 | |||
| 436 | Ga0496125_0112055 | |||
| 437 | Ga0496126_0009205 | |||
| 438 | Ga0495682_0029793 | |||
| 439 | Ga0501292_000060 | |||
| 440 | Ga0501294_000652 | |||
| 441 | Ga0501032_0038131 | |||
| 442 | Ga0501047_0003781 | |||
| 443 | Ga0501222_000281 | |||
| 444 | Ga0501223_000048 | |||
| 445 | Ga0501223_002825 | |||
| 446 | Ga0501249_000456 | |||
| 447 | Ga0501261_000139 | |||
| 448 | Ga0501225_0000159 | |||
| 449 | Ga0501225_0010476 | |||
| 450 | Ga0501225_0022218 | |||
| 451 | Ga0501279_000031 | |||
| 452 | Ga0501280_000036 | |||
| 453 | Ga0501281_00059 | |||
| 454 | Ga0501282_000192 | |||
| 455 | nmdc:mga03n38_65296_c1 | |||
| 456 | nmdc:mga00v17_64650_c1 | |||
| 457 | nmdc:mga06z11_383_c1 | |||
| 458 | nmdc:mga04h51_90_c1 | |||
| 459 | nmdc:mga05p37_73602_c1 | |||
| 460 | Ga0500643_000585 | |||
| 461 | Ga0500555_000104 | |||
| 462 | Ga0500562_007180 | |||
| 463 | Ga0500592_000195 | |||
| 464 | Ga0500597_000466 | |||
| 465 | Ga0500618_016342 | |||
| 466 | Ga0500642_0003628 | |||
| 467 | Ga0500655_000164 | |||
| 468 | Ga0500559_0019555 | |||
| 469 | Ga0500559_0025867 | |||
| 470 | Ga0500559_0049887 | |||
| 471 | Ga0500573_0000016 | |||
| 472 | Ga0500590_010418 | |||
| 473 | Ga0500604_0001238 | |||
| 474 | Ga0500622_0021213 | |||
| 475 | Ga0500624_000015 | |||
| 476 | Ga0500624_000022 | |||
| 477 | Ga0500627_0000144 | |||
| 478 | Ga0500627_0000574 | |||
| 479 | Ga0500637_0000558 | |||
| 480 | Ga0500661_000079 | |||
| 481 | 2585262397 | |||
| 482 | 2643729180 | |||
| 483 | 2644038665 | |||
| 484 | 2644045192 | |||
| 485 | 2644391365 | |||
| 486 | 2778123719 | |||
| 487 | 2809064725 | |||
| 488 | 2809080606 | |||
| 489 | 2809084971 | |||
| 490 | 2830077099 | |||
| 491 | 2880519619 | |||
| 492 | 2919710601 | |||
| 493 | 2990267431 | |||
| 494 | 2993695334 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3qbw-assembly1.cif.gz_B | crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-actetylmuramic acid kinase (anmk) bound to adenosine diphosphate | 0.9331 | 1 | 360 |
| 3qbx-assembly1.cif.gz_A | crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-actetylmuramic acid kinase (anmk) bound to 1,6-anhydro-n-actetylmuramic acid | 0.932 | 1 | 360 |
| 8cpb-assembly1.cif.gz_B | 1,6-anhydro-n-actetylmuramic acid kinase (anmk) in complex with amppnp, and anhmurnac at 1.7 angstroms resolution. | 0.9274 | 1 | 360 |
| 3qbx-assembly1.cif.gz_A | crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-actetylmuramic acid kinase (anmk) bound to 1,6-anhydro-n-actetylmuramic acid | 0.9269 | 1 | 360 |
| 3qbw-assembly1.cif.gz_B | crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-actetylmuramic acid kinase (anmk) bound to adenosine diphosphate | 0.9255 | 1 | 360 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4mo4C01 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.9116 | 1 | 145 | 3.30.420.40 |
| af_P77570_5_144_3.30.420.40 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.901 | 3 | 144 | 3.30.420.40 |
| af_P77570_5_144_3.30.420.40 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.8828 | 3 | 144 | 3.30.420.40 |
| 3cqyB02 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.8794 | 146 | 321 | 3.30.420.40 |
| 4mo4C02 | Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain | 0.8782 | 146 | 320 | 3.30.420.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2W4QWI2-F1-model_v4 | Anhydro-N-acetylmuramic acid kinase | 0.9794 | 181 | 357 |
GO:0005524
GO:0006040 GO:0009254 GO:0016773 |
| AF-Q5NLZ4-F1-model_v4 | Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) (AnhMurNAc kinase) | 0.9763 | 1 | 360 |
GO:0005524
GO:0006040 GO:0009254 GO:0016301 GO:0016773 GO:0097175 |
| AF-A0A3D0WBH0-F1-model_v4 | Anhydro-N-acetylmuramic acid kinase | 0.976 | 7 | 168 |
GO:0005524
GO:0006040 GO:0009254 GO:0016301 GO:0016773 |
| AF-A0A5R2N2A0-F1-model_v4 | Anhydro-N-acetylmuramic acid kinase | 0.9751 | 190 | 334 |
GO:0005524
GO:0006040 GO:0009254 GO:0016301 GO:0016773 |
| AF-A0A3S1DX66-F1-model_v4 | Anhydro-N-acetylmuramic acid kinase | 0.973 | 224 | 357 |
GO:0005524
GO:0006040 GO:0009254 GO:0016301 GO:0016773 |