F358683

General Info

Members Datasets Scaffolds Average Seq Length
247 180 232 611

Family's Representative Sequence

Representative Sequence 3300003775|Ga0055524_1003240|Ga0055524_10032402
Length 647
Sequence MLKIDDLHVHLDADAGLVRAIDGMRLTLAQGQTFALVGESGCGKSMTALALMRLLPDNGRIAGGRLELDGQDLFDLSEARMRDVRGGRIGMIFQEPGTSLNPVMKVGDQIVEAIEAHTPLRGAAARQKAVDWLRRVGIPEPERRIDEYPFRLSGGQKQRIMIAMTLAAEPDFLIADEPTTALDVTIQAQILDLLKGLQRERGLGLLLITHDLGVVSGMAHQVALMYAGQIVEVASAAEFFSAPKHPYARLLLRALPDAQRRGEPLAAIPGTVPPLWQTFSGCRFAPRCDRAMAHCASTQPVLAGLADGAVGHEVRCLLYADATGGVDREIAVGTGAPLRSDASARSAFAPRGTGADGFAQSPPRLLLEVKDLTVRYPMGRGFFGGTKRWFDAVGGVSYSIEAGKTLALVGESGCGKTTSGKAIVQLLRRVAVIGGQALLHPPVAPVDAAGQGGAPQDLFQLDGDALREARRQVQIIFQDPFASLNPRLRVQEVLEEGLLALRPELDAPARLALLHELLDQVGLRRDALARFPHEFSGGQRQRIAIARALAVEPRLIVCDEPTSALDVSVQAQILNLLRELQRSRGLSYLFITHNIGVVEYIADEVAVMQAGRIVESGSCDTVLGQPREGYTRTLLAAVPRVERRTVA

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2643221585 Pelomonas sp. Root662 Isolate Unclassified
6 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
7 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
8 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
9 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
10 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
11 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
12 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
13 2643221656 Pelomonas sp. Root405 Isolate Unclassified
14 2831864461 Roseateles noduli HZ7 Isolate Nodule
15 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
16 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
17 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
18 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
19 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
20 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
21 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
22 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
23 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
24 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
25 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
29 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
30 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
33 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
40 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
41 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
53 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
54 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
76 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
80 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
82 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
83 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
88 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
116 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
117 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
118 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
119 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
120 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
125 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
126 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
127 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
128 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
132 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
133 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
134 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
135 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
139 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
140 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
141 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
142 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
143 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
144 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
145 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
146 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
147 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
148 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
149 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
150 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
151 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
152 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
155 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
156 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
157 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
162 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
163 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
164 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
171 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
172 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
173 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
174 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
175 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
176 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
179 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
180 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.93
Metatranscriptomes 0
Isolates 6.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 29.96
Nodule 2.02
Rhizoplane 0
Rhizosphere 57.49
Stem 0
Stem Tuber 0
Unclassified 10.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007932 3300001979 Bacteria 4280
2 Ga0055539_1000535 3300003752 Bacteria 11519
3 Ga0055533_1000010 3300003756 Bacteria 491196
4 Ga0055535_1000272 3300003761 Bacteria 54297
5 Ga0055529_1000303 3300003763 Bacteria 56663
6 Ga0055526_1001195 3300003771 Bacteria 18771
7 Ga0055526_1004055 3300003771 Bacteria 8992
8 Ga0055524_1000203 3300003775 Bacteria 64635
9 Ga0055524_1003240 3300003775 Bacteria 7969
10 Ga0055530_10000258 3300003791 Bacteria 47803
11 Ga0055540_1000023 3300003792 Bacteria 201131
12 Ga0055531_10000064 3300003794 Bacteria 117923
13 Ga0055531_10006150 3300003794 Bacteria 6870
14 Ga0055531_10007107 3300003794 Bacteria 6184
15 Ga0055531_10013075 3300003794 Bacteria 3853
16 Ga0065165_1000074 3300005262 Bacteria 164454
17 Ga0065165_1000233 3300005262 Bacteria 96768
18 Ga0070658_10040483 3300005327 Bacteria 3759
19 Ga0070677_10010229 3300005333 Bacteria 3204
20 Ga0068869_100021222 3300005334 Bacteria 4465
21 Ga0070666_10004833 3300005335 Bacteria 8235
22 Ga0070660_100021245 3300005339 Bacteria 4784
23 Ga0070661_100012560 3300005344 Bacteria 5927
24 Ga0070675_100003628 3300005354 Bacteria 11734
25 Ga0070675_100021807 3300005354 Bacteria 5117
26 Ga0070671_100013766 3300005355 Bacteria 6525
27 Ga0070671_100091554 3300005355 Bacteria 2547
28 Ga0070659_100004176 3300005366 Bacteria 10298
29 Ga0070667_100000677 3300005367 Bacteria 33094
30 Ga0070663_100011045 3300005455 Bacteria 5653
31 Ga0070662_100016330 3300005457 Bacteria 4983
32 Ga0068867_100000068 3300005459 Bacteria 62945
33 Ga0070706_100000546 3300005467 Bacteria 43742
34 Ga0070706_100058479 3300005467 Bacteria 3558
35 Ga0070672_100014451 3300005543 Bacteria 5596
36 Ga0070672_100093224 3300005543 Bacteria 2432
37 Ga0070665_100018158 3300005548 Bacteria 7056
38 Ga0070704_100001888 3300005549 Bacteria 11554
39 Ga0068855_100047847 3300005563 Bacteria 5051
40 Ga0068855_100074084 3300005563 Bacteria 3955
41 Ga0070664_100070181 3300005564 Bacteria 3000
42 Ga0068859_100038231 3300005617 Bacteria 4815
43 Ga0068859_100040646 3300005617 Bacteria 4668
44 Ga0068859_100078136 3300005617 Bacteria 3350
45 Ga0068864_100000464 3300005618 Bacteria 35141
46 Ga0068861_100001416 3300005719 Bacteria 15100
47 Ga0068863_100032936 3300005841 Bacteria 4937
48 Ga0068858_100001151 3300005842 Bacteria 27341
49 Ga0068860_100000903 3300005843 Bacteria 32899
50 Ga0075363_100007092 3300006048 Bacteria 5126
51 Ga0075369_10003479 3300006186 Bacteria 5734
52 Ga0075366_10001901 3300006195 Bacteria 10549
53 Ga0075366_10005281 3300006195 Bacteria 6997
54 Ga0075370_10000599 3300006353 Bacteria 13913
55 Ga0075370_10001959 3300006353 Bacteria 9310
56 Ga0075370_10015388 3300006353 Bacteria 4095
57 Ga0075370_10018683 3300006353 Bacteria 3762
58 Ga0075429_100000342 3300006880 Bacteria 33999
59 Ga0068865_100005481 3300006881 Bacteria 7697
60 Ga0097620_100038230 3300006931 Bacteria 4815
61 Ga0097620_100040645 3300006931 Bacteria 4668
62 Ga0097620_100078132 3300006931 Bacteria 3350
63 Ga0099823_1019324 3300006944 Bacteria 6512
64 Ga0079104_1000273 3300006946 Bacteria 67267
65 Ga0105240_10016146 3300009093 Bacteria 10120
66 Ga0114129_10000300 3300009147 Bacteria 57502
67 Ga0105243_10023884 3300009148 Bacteria 4659
68 Ga0105243_10116720 3300009148 Bacteria 2243
69 Ga0105237_10005085 3300009545 Bacteria 14946
70 Ga0105238_10003253 3300009551 Bacteria 16214
71 Ga0105238_10024146 3300009551 Bacteria 6198
72 Ga0105249_10015913 3300009553 Bacteria 6666
73 Ga0105239_10004246 3300010375 Bacteria 17204
74 Ga0157319_1000013 3300012497 Bacteria 154883
75 Ga0157374_10068694 3300013296 Bacteria 3335
76 Ga0157378_10002502 3300013297 Bacteria 16357
77 Ga0157378_10157880 3300013297 Bacteria 2119
78 Ga0163162_10003343 3300013306 Bacteria 15339
79 Ga0163162_10017741 3300013306 Bacteria 6964
80 Ga0157375_10006466 3300013308 Bacteria 10209
81 Ga0157377_10000082 3300014745 Bacteria 74078
82 Ga0157379_10028705 3300014968 Bacteria 4948
83 Ga0157379_10058208 3300014968 Bacteria 3455
84 Ga0157379_10083340 3300014968 Bacteria 2866
85 Ga0213872_10000160 3300021361 Bacteria 61551
86 Ga0213872_10000683 3300021361 Bacteria 25720
87 Ga0213872_10006013 3300021361 Bacteria 6151
88 Ga0209674_100003 3300025226 Bacteria 2196646
89 Ga0209563_100010 3300025230 Bacteria 1337457
90 Ga0209258_100163 3300025242 Bacteria 149677
91 Ga0209258_101625 3300025242 Bacteria 7297
92 Ga0207425_1000810 3300025245 Bacteria 15694
93 Ga0209677_100093 3300025253 Bacteria 101695
94 Ga0209677_100699 3300025253 Bacteria 17140
95 Ga0209759_1001158 3300025256 Bacteria 16724
96 Ga0209129_1000025 3300025258 Bacteria 413639
97 Ga0209455_1000059 3300025272 Bacteria 339995
98 Ga0209673_1003363 3300025273 Bacteria 9526
99 Ga0209675_1007389 3300025291 Bacteria 4221
100 Ga0209564_1000039 3300025295 Bacteria 413604
101 Ga0209564_1000051 3300025295 Bacteria 357748
102 Ga0209758_1000163 3300025297 Bacteria 151988
103 Ga0209758_1000287 3300025297 Bacteria 99234
104 Ga0209050_1000748 3300025298 Bacteria 46763
105 Ga0209050_1003635 3300025298 Bacteria 11149
106 Ga0209050_1015024 3300025298 Bacteria 3286
107 Ga0209256_1000024 3300025299 Bacteria 448909
108 Ga0209256_1001754 3300025299 Bacteria 20644
109 Ga0209256_1004272 3300025299 Bacteria 9128
110 Ga0209051_1000079 3300025303 Bacteria 201183
111 Ga0209051_1001323 3300025303 Bacteria 21639
112 Ga0209051_1003653 3300025303 Bacteria 9965
113 Ga0209257_1000183 3300025304 Bacteria 156618
114 Ga0209257_1001091 3300025304 Bacteria 35384
115 Ga0209257_1005022 3300025304 Bacteria 9636
116 Ga0209257_1010712 3300025304 Bacteria 4572
117 Ga0207705_10011934 3300025909 Bacteria 6277
118 Ga0207684_10046620 3300025910 Bacteria 3677
119 Ga0207695_10030302 3300025913 Bacteria 5958
120 Ga0207671_10018006 3300025914 Bacteria 5432
121 Ga0207657_10059603 3300025919 Bacteria 3278
122 Ga0207649_10018475 3300025920 Bacteria 3966
123 Ga0207681_10009335 3300025923 Bacteria 5994
124 Ga0207694_10020671 3300025924 Bacteria 4984
125 Ga0207650_10004133 3300025925 Bacteria 9920
126 Ga0207644_10055416 3300025931 Bacteria 2857
127 Ga0207644_10076976 3300025931 Bacteria 2456
128 Ga0207709_10000935 3300025935 Bacteria 21921
129 Ga0207704_10014358 3300025938 Bacteria 3996
130 Ga0207689_10032880 3300025942 Bacteria 4311
131 Ga0207679_10030797 3300025945 Bacteria 3750
132 Ga0207712_10027563 3300025961 Bacteria 3794
133 Ga0207658_10001186 3300025986 Bacteria 20793
134 Ga0207658_10015208 3300025986 Bacteria 5279
135 Ga0207703_10020976 3300026035 Bacteria 5113
136 Ga0207678_10000695 3300026067 Bacteria 30735
137 Ga0207708_10008823 3300026075 Bacteria 7462
138 Ga0207641_10024339 3300026088 Bacteria 4990
139 Ga0207648_10000942 3300026089 Bacteria 32855
140 Ga0207648_10005793 3300026089 Bacteria 12380
141 Ga0207648_10024716 3300026089 Bacteria 5358
142 Ga0207676_10005899 3300026095 Bacteria 8653
143 Ga0207675_100005766 3300026118 Bacteria 11845
144 Ga0207675_100040896 3300026118 Bacteria 4331
145 Ga0209281_1000416 3300027111 Bacteria 64290
146 Ga0209389_1022592 3300027296 Bacteria 5569
147 Ga0265336_10000051 3300028666 Bacteria 114796
148 Ga0307517_10000052 3300028786 Bacteria 155904
149 Ga0307517_10032154 3300028786 Bacteria 6076
150 Ga0307515_10000416 3300028794 Bacteria 102535
151 Ga0307515_10001163 3300028794 Bacteria 60305
152 Ga0307515_10004048 3300028794 Bacteria 30591
153 Ga0307515_10008562 3300028794 Bacteria 19918
154 Ga0307515_10013895 3300028794 Bacteria 14988
155 Ga0307515_10057047 3300028794 Bacteria 5660
156 Ga0265324_10000292 3300029957 Bacteria 37241
157 Ga0265327_10000223 3300031251 Bacteria 115759
158 Ga0307513_10031648 3300031456 Bacteria 5987
159 Ga0307408_100000010 3300031548 Bacteria 420048
160 Ga0307508_10000047 3300031616 Bacteria 137805
161 Ga0307508_10031256 3300031616 Bacteria 4813
162 Ga0307514_10004333 3300031649 Bacteria 13078
163 Ga0307516_10000038 3300031730 Bacteria 147103
164 Ga0307516_10000991 3300031730 Bacteria 39211
165 Ga0307516_10001369 3300031730 Bacteria 33766
166 Ga0307405_10004663 3300031731 Bacteria 6512
167 Ga0307406_10012084 3300031901 Bacteria 4913
168 Ga0307416_100040469 3300032002 Bacteria 3621
169 Ga0307414_10053143 3300032004 Bacteria 2824
170 Ga0307411_10003664 3300032005 Bacteria 7189
171 Ga0307507_10047578 3300033179 Bacteria 4186
172 Ga0373931_0008613 3300035691 Bacteria 4846
173 Ga0373927_0021386 3300035695 Bacteria 4240
174 Ga0373925_0001850 3300037068 Bacteria 17621
175 Ga0395905_0000518 3300037471 Bacteria 52799
176 Ga0395901_0001733 3300038443 Bacteria 22534
177 Ga0436361_0362312 3300039447 Bacteria 55943
178 Ga0436361_0558969 3300039447 Bacteria 5001
179 Ga0436361_0749269 3300039447 Bacteria 121408
180 Ga0436361_1051692 3300039447 Bacteria 7862
181 Ga0450890_000647 3300042127 Bacteria 5064
182 Ga0450892_000090 3300042130 Bacteria 9953
183 Ga0450918_000142 3300042531 Bacteria 15752
184 Ga0450893_0002410 3300042532 Bacteria 2911
185 Ga0451577_0001870 3300042876 Bacteria 26817
186 Ga0451577_0008072 3300042876 Bacteria 10270
187 Ga0466972_0018456 3300044658 Bacteria 3487
188 Ga0451576_0002339 3300045051 Bacteria 28645
189 Ga0451576_0040910 3300045051 Bacteria 4901
190 Ga0495590_0005001 3300046457 Bacteria 5288
191 Ga0495650_0007860 3300046471 Bacteria 6334
192 Ga0495585_0005083 3300046492 Bacteria 8383
193 Ga0495583_0000284 3300046506 Bacteria 81053
194 Ga0495606_0010351 3300046507 Bacteria 7752
195 Ga0495610_0004260 3300046512 Bacteria 10651
196 Ga0495632_0007875 3300046519 Bacteria 6624
197 Ga0495625_0001624 3300046660 Bacteria 26504
198 Ga0495625_0054930 3300046660 Bacteria 2842
199 Ga0495669_0014431 3300046684 Bacteria 3376
200 Ga0495649_0004584 3300046694 Bacteria 8998
201 Ga0495686_0005328 3300047472 Bacteria 10189
202 Ga0501043_0000013 3300049579 Bacteria 185639
203 Ga0501046_0000125 3300049580 Bacteria 81656
204 Ga0501047_0000040 3300049581 Bacteria 185677
205 Ga0501048_0000139 3300049582 Bacteria 43845
206 Ga0501198_000020 3300049649 Bacteria 75919
207 Ga0501222_000025 3300049662 Bacteria 64191
208 nmdc:mga03683_7770_c1 3300050489 Bacteria 3739
209 nmdc:mga03n38_3013_c1 3300050490 Bacteria 5334
210 nmdc:mga0k408_18910_c1 3300050493 Bacteria 3846
211 nmdc:mga0k408_4563_c1 3300050493 Bacteria 7354
212 nmdc:mga07m45_1159_c1 3300050496 Bacteria 11836
213 nmdc:mga07m45_1345_c1 3300050496 Bacteria 11199
214 nmdc:mga07m45_2612_c1 3300050496 Bacteria 8484
215 nmdc:mga07m45_4808_c1 3300050496 Bacteria 6643
216 nmdc:mga07m45_5100_c1 3300050496 Bacteria 6501
217 nmdc:mga05p37_3736_c1 3300050507 Bacteria 17814
218 nmdc:mga09592_488_c1 3300050508 Bacteria 29700
219 nmdc:mga06r32_4315_c1 3300050510 Bacteria 12728
220 Ga0500635_0000248 3300053080 Bacteria 23504
221 Ga0500578_0007141 3300053086 Bacteria 7382
222 Ga0500651_0011207 3300053093 Bacteria 5399
223 Ga0500628_000391 3300053129 Bacteria 8290
224 Ga0500652_000226 3300053131 Bacteria 21494
225 Ga0500658_0013881 3300053134 Bacteria 2979
226 Ga0500559_0000470 3300053136 Bacteria 28674
227 Ga0500568_0003300 3300053139 Bacteria 9096
228 Ga0500573_0000023 3300053140 Bacteria 152268
229 Ga0500622_0000447 3300053156 Bacteria 39298
230 Ga0500622_0001646 3300053156 Bacteria 17463
231 Ga0500622_0001950 3300053156 Bacteria 15529
232 Ga0500645_002728 3300053730 Bacteria 7667

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053140 Ga0500573_0000023 Ga0500573_0000023_60950_62587 525
2 iso_pu_bacteria 2919450847 2919451125 527
3 3300038443 Ga0395901_0001733 Ga0395901_0001733_13353_15215 561
4 3300025303 Ga0209051_1003653 Ga0209051_10036534 573
5 3300003752 Ga0055539_1000535 Ga0055539_10005358 574
6 3300003756 Ga0055533_1000010 Ga0055533_1000010128 574
7 3300025226 Ga0209674_100003 Ga0209674_1000031464 574
8 3300025230 Ga0209563_100010 Ga0209563_1000101191 574
9 3300025253 Ga0209677_100093 Ga0209677_10009362 574
10 3300025909 Ga0207705_10011934 Ga0207705_100119344 577
11 3300005563 Ga0068855_100047847 Ga0068855_1000478474 578
12 3300037471 Ga0395905_0000518 Ga0395905_0000518_37511_39376 578
13 3300046492 Ga0495585_0005083 Ga0495585_0005083_4299_6155 578
14 3300025256 Ga0209759_1001158 Ga0209759_100115811 582
15 3300028794 Ga0307515_10004048 Ga0307515_1000404813 582
16 3300046512 Ga0495610_0004260 Ga0495610_0004260_3402_5237 582
17 3300046660 Ga0495625_0001624 Ga0495625_0001624_15645_17498 582
18 3300053134 Ga0500658_0013881 Ga0500658_0013881_792_2627 582
19 3300005334 Ga0068869_100021222 Ga0068869_1000212222 584
20 3300025942 Ga0207689_10032880 Ga0207689_100328802 584
21 3300031456 Ga0307513_10031648 Ga0307513_100316482 585
22 3300028794 Ga0307515_10000416 Ga0307515_1000041668 586
23 3300028794 Ga0307515_10001163 Ga0307515_1000116340 586
24 3300042876 Ga0451577_0001870 Ga0451577_0001870_20474_22309 586
25 3300005335 Ga0070666_10004833 Ga0070666_100048334 587
26 3300005354 Ga0070675_100021807 Ga0070675_1000218072 587
27 3300005355 Ga0070671_100013766 Ga0070671_1000137662 587
28 3300005617 Ga0068859_100038231 Ga0068859_1000382312 587
29 3300005618 Ga0068864_100000464 Ga0068864_10000046435 587
30 3300005841 Ga0068863_100032936 Ga0068863_1000329363 587
31 3300005842 Ga0068858_100001151 Ga0068858_10000115125 587
32 3300006931 Ga0097620_100038230 Ga0097620_1000382302 587
33 3300013306 Ga0163162_10017741 Ga0163162_100177412 587
34 3300014968 Ga0157379_10028705 Ga0157379_100287052 587
35 3300025253 Ga0209677_100699 Ga0209677_10069911 587
36 3300025931 Ga0207644_10055416 Ga0207644_100554162 587
37 3300025986 Ga0207658_10015208 Ga0207658_100152083 587
38 3300026088 Ga0207641_10024339 Ga0207641_100243392 587
39 3300026095 Ga0207676_10005899 Ga0207676_100058997 587
40 3300031616 Ga0307508_10000047 Ga0307508_1000004736 587
41 3300033179 Ga0307507_10047578 Ga0307507_100475782 587
42 3300003794 Ga0055531_10007107 Ga0055531_100071072 588
43 3300005457 Ga0070662_100016330 Ga0070662_1000163304 588
44 3300012497 Ga0157319_1000013 Ga0157319_100001341 588
45 3300025304 Ga0209257_1005022 Ga0209257_10050225 588
46 3300035691 Ga0373931_0008613 Ga0373931_0008613_2421_4277 588
47 3300053139 Ga0500568_0003300 Ga0500568_0003300_4811_6691 588
48 3300042531 Ga0450918_000142 Ga0450918_000142_11410_13233 589
49 3300005617 Ga0068859_100040646 Ga0068859_1000406463 590
50 3300006931 Ga0097620_100040645 Ga0097620_1000406453 590
51 3300009553 Ga0105249_10015913 Ga0105249_100159132 590
52 3300021361 Ga0213872_10000683 Ga0213872_1000068321 590
53 3300039447 Ga0436361_0749269 Ga0436361_0749269_11034_12908 590
54 3300005327 Ga0070658_10040483 Ga0070658_100404831 591
55 3300006195 Ga0075366_10001901 Ga0075366_100019014 591
56 3300006353 Ga0075370_10000599 Ga0075370_100005994 591
57 3300028666 Ga0265336_10000051 Ga0265336_1000005142 591
58 3300029957 Ga0265324_10000292 Ga0265324_1000029212 591
59 3300047472 Ga0495686_0005328 Ga0495686_0005328_460_2298 591
60 3300006353 Ga0075370_10018683 Ga0075370_100186833 592
61 3300053156 Ga0500622_0001646 Ga0500622_0001646_8734_10698 592
62 3300006353 Ga0075370_10015388 Ga0075370_100153883 593
63 3300050493 nmdc:mga0k408_18910_c1 nmdc:mga0k408_18910_c1_138_1991 593
64 3300050496 nmdc:mga07m45_2612_c1 nmdc:mga07m45_2612_c1_448_2301 593
65 3300053093 Ga0500651_0011207 Ga0500651_0011207_19_1884 593
66 3300053129 Ga0500628_000391 Ga0500628_000391_2920_4785 593
67 3300053131 Ga0500652_000226 Ga0500652_000226_3516_5381 593
68 3300053156 Ga0500622_0000447 Ga0500622_0000447_33918_35783 593
69 3300005333 Ga0070677_10010229 Ga0070677_100102292 595
70 3300005354 Ga0070675_100003628 Ga0070675_1000036281 595
71 3300005355 Ga0070671_100091554 Ga0070671_1000915542 595
72 3300009545 Ga0105237_10005085 Ga0105237_100050852 595
73 3300009551 Ga0105238_10024146 Ga0105238_100241462 595
74 3300010375 Ga0105239_10004246 Ga0105239_100042462 595
75 3300025914 Ga0207671_10018006 Ga0207671_100180062 595
76 3300025923 Ga0207681_10009335 Ga0207681_100093354 595
77 3300025924 Ga0207694_10020671 Ga0207694_100206712 595
78 3300025925 Ga0207650_10004133 Ga0207650_100041331 595
79 3300026089 Ga0207648_10024716 Ga0207648_100247162 595
80 3300005467 Ga0070706_100058479 Ga0070706_1000584792 596
81 3300025910 Ga0207684_10046620 Ga0207684_100466201 596
82 3300046506 Ga0495583_0000284 Ga0495583_0000284_68107_69969 596
83 3300046507 Ga0495606_0010351 Ga0495606_0010351_1174_3036 596
84 3300046660 Ga0495625_0054930 Ga0495625_0054930_272_2134 596
85 3300046684 Ga0495669_0014431 Ga0495669_0014431_728_2590 596
86 3300046694 Ga0495649_0004584 Ga0495649_0004584_6831_8693 596
87 3300053080 Ga0500635_0000248 Ga0500635_0000248_6638_8503 596
88 3300003771 Ga0055526_1004055 Ga0055526_10040552 597
89 3300025295 Ga0209564_1000051 Ga0209564_100005163 597
90 3300028794 Ga0307515_10057047 Ga0307515_100570474 597
91 3300031251 Ga0265327_10000223 Ga0265327_100002236 597
92 3300046471 Ga0495650_0007860 Ga0495650_0007860_745_2604 597
93 3300053136 Ga0500559_0000470 Ga0500559_0000470_15655_17502 597
94 3300053156 Ga0500622_0001950 Ga0500622_0001950_11435_13282 597
95 3300003771 Ga0055526_1001195 Ga0055526_10011952 598
96 3300005262 Ga0065165_1000233 Ga0065165_100023378 598
97 3300025245 Ga0207425_1000810 Ga0207425_10008104 598
98 3300025258 Ga0209129_1000025 Ga0209129_1000025375 598
99 3300025295 Ga0209564_1000039 Ga0209564_1000039375 598
100 3300025297 Ga0209758_1000163 Ga0209758_1000163135 598
101 3300025297 Ga0209758_1000287 Ga0209758_100028795 598
102 3300044658 Ga0466972_0018456 Ga0466972_0018456_496_2361 598
103 3300046519 Ga0495632_0007875 Ga0495632_0007875_4382_6247 598
104 iso_pu_bacteria 2585428062 2587754669 598
105 iso_pu_bacteria 2643221585 2643937120 598
106 iso_pu_bacteria 2643221639 2644217902 598
107 iso_pu_bacteria 2643221646 2644258357 598
108 iso_pu_bacteria 2643221656 2644318285 598
109 3300046457 Ga0495590_0005001 Ga0495590_0005001_3336_5240 599
110 iso_pu_bacteria 2643221644 2644247938 599
111 3300005543 Ga0070672_100093224 Ga0070672_1000932241 600
112 3300021361 Ga0213872_10000160 Ga0213872_1000016043 600
113 3300026118 Ga0207675_100040896 Ga0207675_1000408962 600
114 3300039447 Ga0436361_0362312 Ga0436361_0362312_42794_44650 600
115 3300039447 Ga0436361_0558969 Ga0436361_0558969_1420_3324 601
116 3300045051 Ga0451576_0002339 Ga0451576_0002339_19589_21418 601
117 3300003775 Ga0055524_1000203 Ga0055524_10002032 602
118 3300003794 Ga0055531_10000064 Ga0055531_1000006453 602
119 3300005339 Ga0070660_100021245 Ga0070660_1000212452 602
120 3300005344 Ga0070661_100012560 Ga0070661_1000125604 602
121 3300005366 Ga0070659_100004176 Ga0070659_1000041767 602
122 3300005564 Ga0070664_100070181 Ga0070664_1000701812 602
123 3300009148 Ga0105243_10023884 Ga0105243_100238842 602
124 3300025291 Ga0209675_1007389 Ga0209675_10073892 602
125 3300025298 Ga0209050_1015024 Ga0209050_10150242 602
126 3300025299 Ga0209256_1000024 Ga0209256_100002482 602
127 3300025919 Ga0207657_10059603 Ga0207657_100596032 602
128 3300025920 Ga0207649_10018475 Ga0207649_100184752 602
129 3300025945 Ga0207679_10030797 Ga0207679_100307973 602
130 3300028794 Ga0307515_10013895 Ga0307515_100138952 602
131 3300031548 Ga0307408_100000010 Ga0307408_10000001037 602
132 3300042127 Ga0450890_000647 Ga0450890_000647_1568_3400 602
133 3300042130 Ga0450892_000090 Ga0450892_000090_333_2165 602
134 3300042532 Ga0450893_0002410 Ga0450893_0002410_343_2175 602
135 3300050496 nmdc:mga07m45_1345_c1 nmdc:mga07m45_1345_c1_3269_5101 602
136 3300053086 Ga0500578_0007141 Ga0500578_0007141_2015_3868 602
137 3300005549 Ga0070704_100001888 Ga0070704_1000018884 603
138 3300009551 Ga0105238_10003253 Ga0105238_100032531 603
139 3300021361 Ga0213872_10006013 Ga0213872_100060133 603
140 3300025242 Ga0209258_101625 Ga0209258_1016252 603
141 3300039447 Ga0436361_1051692 Ga0436361_1051692_2028_3914 603
142 iso_pu_bacteria 2585428057 2587726745 603
143 iso_pu_bacteria 2585428058 2587736949 603
144 iso_pu_bacteria 2588253510 2588295495 603
145 iso_pu_bacteria 2643221592 2643971934 603
146 iso_pu_bacteria 2643221625 2644139428 603
147 iso_pu_bacteria 2643221648 2644275038 603
148 3300003761 Ga0055535_1000272 Ga0055535_100027224 604
149 3300003763 Ga0055529_1000303 Ga0055529_100030326 604
150 3300003791 Ga0055530_10000258 Ga0055530_100002589 604
151 3300003792 Ga0055540_1000023 Ga0055540_100002376 604
152 3300003794 Ga0055531_10013075 Ga0055531_100130752 604
153 3300005262 Ga0065165_1000074 Ga0065165_100007457 604
154 3300005563 Ga0068855_100074084 Ga0068855_1000740843 604
155 3300006880 Ga0075429_100000342 Ga0075429_1000003424 604
156 3300006946 Ga0079104_1000273 Ga0079104_100027313 604
157 3300009093 Ga0105240_10016146 Ga0105240_100161465 604
158 3300009147 Ga0114129_10000300 Ga0114129_100003007 604
159 3300025242 Ga0209258_100163 Ga0209258_10016392 604
160 3300025272 Ga0209455_1000059 Ga0209455_1000059201 604
161 3300025298 Ga0209050_1000748 Ga0209050_100074829 604
162 3300025303 Ga0209051_1000079 Ga0209051_1000079111 604
163 3300025304 Ga0209257_1000183 Ga0209257_100018369 604
164 3300025913 Ga0207695_10030302 Ga0207695_100303022 604
165 3300027111 Ga0209281_1000416 Ga0209281_100041653 604
166 3300028794 Ga0307515_10008562 Ga0307515_100085629 604
167 3300031649 Ga0307514_10004333 Ga0307514_1000433311 604
168 3300031730 Ga0307516_10000038 Ga0307516_1000003832 604
169 3300031730 Ga0307516_10001369 Ga0307516_100013695 604
170 3300031731 Ga0307405_10004663 Ga0307405_100046632 604
171 3300031901 Ga0307406_10012084 Ga0307406_100120842 604
172 3300032002 Ga0307416_100040469 Ga0307416_1000404692 604
173 3300032004 Ga0307414_10053143 Ga0307414_100531431 604
174 3300032005 Ga0307411_10003664 Ga0307411_100036644 604
175 3300042876 Ga0451577_0008072 Ga0451577_0008072_8398_10254 604
176 3300045051 Ga0451576_0040910 Ga0451576_0040910_2795_4663 604
177 3300050496 nmdc:mga07m45_4808_c1 nmdc:mga07m45_4808_c1_1054_2910 604
178 3300050507 nmdc:mga05p37_3736_c1 nmdc:mga05p37_3736_c1_9688_11553 604
179 3300050508 nmdc:mga09592_488_c1 nmdc:mga09592_488_c1_17951_19816 604
180 3300050510 nmdc:mga06r32_4315_c1 nmdc:mga06r32_4315_c1_899_2764 604
181 3300053730 Ga0500645_002728 Ga0500645_002728_4610_6472 604
182 iso_pu_bacteria 2643221654 2644304493 605
183 3300013296 Ga0157374_10068694 Ga0157374_100686942 606
184 3300049579 Ga0501043_0000013 Ga0501043_0000013_125505_127409 606
185 3300049580 Ga0501046_0000125 Ga0501046_0000125_21603_23507 606
186 3300049581 Ga0501047_0000040 Ga0501047_0000040_125505_127409 606
187 3300049582 Ga0501048_0000139 Ga0501048_0000139_25501_27405 606
188 3300005455 Ga0070663_100011045 Ga0070663_1000110453 607
189 3300005543 Ga0070672_100014451 Ga0070672_1000144512 607
190 3300005548 Ga0070665_100018158 Ga0070665_1000181583 607
191 3300005617 Ga0068859_100078136 Ga0068859_1000781362 607
192 3300005719 Ga0068861_100001416 Ga0068861_1000014165 607
193 3300005843 Ga0068860_100000903 Ga0068860_10000090318 607
194 3300006881 Ga0068865_100005481 Ga0068865_1000054815 607
195 3300006931 Ga0097620_100078132 Ga0097620_1000781322 607
196 3300009148 Ga0105243_10116720 Ga0105243_101167201 607
197 3300013297 Ga0157378_10002502 Ga0157378_100025027 607
198 3300013297 Ga0157378_10157880 Ga0157378_101578801 607
199 3300013306 Ga0163162_10003343 Ga0163162_100033438 607
200 3300013308 Ga0157375_10006466 Ga0157375_100064667 607
201 3300014968 Ga0157379_10058208 Ga0157379_100582081 607
202 3300025273 Ga0209673_1003363 Ga0209673_10033632 607
203 3300025931 Ga0207644_10076976 Ga0207644_100769762 607
204 3300025938 Ga0207704_10014358 Ga0207704_100143582 607
205 3300025961 Ga0207712_10027563 Ga0207712_100275631 607
206 3300026035 Ga0207703_10020976 Ga0207703_100209762 607
207 3300026067 Ga0207678_10000695 Ga0207678_1000069522 607
208 3300026075 Ga0207708_10008823 Ga0207708_100088232 607
209 3300026089 Ga0207648_10005793 Ga0207648_100057933 607
210 3300026118 Ga0207675_100005766 Ga0207675_1000057663 607
211 3300006048 Ga0075363_100007092 Ga0075363_1000070922 608
212 3300006186 Ga0075369_10003479 Ga0075369_100034792 608
213 3300006195 Ga0075366_10005281 Ga0075366_100052813 608
214 3300006353 Ga0075370_10001959 Ga0075370_100019594 608
215 3300028786 Ga0307517_10000052 Ga0307517_1000005266 608
216 3300028786 Ga0307517_10032154 Ga0307517_100321543 608
217 3300031616 Ga0307508_10031256 Ga0307508_100312562 608
218 3300049649 Ga0501198_000020 Ga0501198_000020_29128_31041 608
219 3300049662 Ga0501222_000025 Ga0501222_000025_44722_46635 608
220 3300050489 nmdc:mga03683_7770_c1 nmdc:mga03683_7770_c1_939_2792 608
221 3300050490 nmdc:mga03n38_3013_c1 nmdc:mga03n38_3013_c1_1812_3665 608
222 3300050493 nmdc:mga0k408_4563_c1 nmdc:mga0k408_4563_c1_3606_5459 608
223 3300050496 nmdc:mga07m45_1159_c1 nmdc:mga07m45_1159_c1_7871_9724 608
224 iso_pu_bacteria 2831864461 2831868138 608
225 3300005367 Ga0070667_100000677 Ga0070667_1000006777 609
226 3300005459 Ga0068867_100000068 Ga0068867_10000006848 609
227 3300014745 Ga0157377_10000082 Ga0157377_1000008258 609
228 3300014968 Ga0157379_10083340 Ga0157379_100833402 609
229 3300025935 Ga0207709_10000935 Ga0207709_1000093520 609
230 3300025986 Ga0207658_10001186 Ga0207658_100011868 609
231 3300026089 Ga0207648_10000942 Ga0207648_1000094227 609
232 3300031730 Ga0307516_10000991 Ga0307516_1000099115 609
233 3300005467 Ga0070706_100000546 Ga0070706_1000005463 611
234 3300025304 Ga0209257_1010712 Ga0209257_10107123 611
235 3300035695 Ga0373927_0021386 Ga0373927_0021386_1708_3588 611
236 3300037068 Ga0373925_0001850 Ga0373925_0001850_15314_17194 611
237 3300003775 Ga0055524_1003240 Ga0055524_10032402 612
238 3300003794 Ga0055531_10006150 Ga0055531_100061503 612
239 3300025298 Ga0209050_1003635 Ga0209050_10036352 612
240 3300025299 Ga0209256_1001754 Ga0209256_10017545 612
241 3300025299 Ga0209256_1004272 Ga0209256_10042725 612
242 3300025303 Ga0209051_1001323 Ga0209051_100132315 612
243 3300025304 Ga0209257_1001091 Ga0209257_100109130 612
244 3300050496 nmdc:mga07m45_5100_c1 nmdc:mga07m45_5100_c1_3885_5918 612
245 3300006944 Ga0099823_1019324 Ga0099823_10193241 614
246 3300027296 Ga0209389_1022592 Ga0209389_10225924 614
247 3300001979 JGI24740J21852_10007932 JGI24740J21852_100079322 619

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

231

295

0.99

PF00005

ABC_tran

ABC transporter

21

180

0.93

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

614

646

0.93

PF00005

ABC_tran

ABC transporter

393

563

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9505 355 612
5x41-assembly1.cif.gz_B 3.5a resolution structure of a cobalt energy-coupling factor transporter using lcp method-cbimqo 0.9352 354 600
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9321 1 235
4fwi-assembly1.cif.gz_B crystal structure of the nucleotide-binding domain of a dipeptide abc transporter 0.9275 2 318
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.9266 2 241
ID Description Score Start End Superfamily
af_P33916_3_268_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.982 2 249 3.40.50.300
af_Q2G1F8_1_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9808 2 257 3.40.50.300
af_I6Y482_6_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9732 2 249 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.972 2 316 3.40.50.300
af_P37313_10_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9713 353 617 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A537WAU2-F1-model_v4 ABC transporter ATP-binding protein 0.9911 18 249 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A7V9M7E5-F1-model_v4 ABC transporter ATP-binding protein 0.9838 2 253 GO:0005524
GO:0016887
AF-A0A1S8C982-F1-model_v4 ABC transporter domain-containing protein 0.9834 64 249 GO:0005524
GO:0016887
AF-A0A0L8EX25-F1-model_v4 deleted 0.983 1 322
AF-X0QJQ9-F1-model_v4 Dipeptide transport ATP-binding protein DppD 0.9829 451 612 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
88.27 0.86 High
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Predicted Structure (AlphaFold2)

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