F358910

General Info

Members Datasets Scaffolds Average Seq Length
247 157 494 304

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100099604|Ga0075428_1000996044
Length 354
Sequence LDRCPKDTAGGPAWIRLADEVAFPSPIAGIIVLQGGIFQGVFRALAARGEGMAAARRIICVGHAALDRIYRIEAFPPEPTKVRALEHIEAGGGMAANAAVAIARLGGRAELWSRTGDDAAGSSVRAGLQAERVDVRYLQAFEGARTSTSAIIVDRGGERLIVGQRDAGMPSGTSWLPLERVREADAVLGDLRWLEALRSVFARAKQESIPTVLDADLGAREALESILRLTDYAIFSAPALRELVPSGTDAERLAAVRAVGPGYAGVTLGPEGYLWRDQTETRRIPAFPVTVTDTTGAGDAFHGALTLFLAEGRPVADCARLASAVAAMKCTRLGSRSGLPNRAELAAFLATHGA

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
76 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
77 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
78 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
79 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
80 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
81 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
90 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
96 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
97 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
137 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
138 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
149 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
150 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
151 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
157 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.17
Nodule 0
Rhizoplane 9.31
Rhizosphere 74.9
Stem 0
Stem Tuber 0
Unclassified 11.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100099604 3300006844 Bacteria 3169
2 JGI25406J46586_10040179 3300003203 Bacteria 1661
3 rootL2_10172378 3300003322 Bacteria 1994
4 Ga0065704_10042847 3300005289 Bacteria 1044
5 Ga0070690_100003345 3300005330 Bacteria 8745
6 Ga0070680_100419361 3300005336 Unclassified 1142
7 Ga0070689_100280243 3300005340 Bacteria 1383
8 Ga0070691_10005519 3300005341 Bacteria 5757
9 Ga0070691_10037020 3300005341 Bacteria 2301
10 Ga0070669_100314225 3300005353 Bacteria 1264
11 Ga0070675_100014903 3300005354 Bacteria 6139
12 Ga0070659_100167522 3300005366 Bacteria 1798
13 Ga0070667_100476337 3300005367 Bacteria 1143
14 Ga0070703_10002070 3300005406 Bacteria 5849
15 Ga0070701_10007494 3300005438 Bacteria 4666
16 Ga0070701_10008299 3300005438 Unclassified 4487
17 Ga0070705_100000908 3300005440 Bacteria 16556
18 Ga0070700_100001322 3300005441 Bacteria 12291
19 Ga0070694_100000725 3300005444 Bacteria 18394
20 Ga0070708_100021118 3300005445 Bacteria 5499
21 Ga0070708_100182016 3300005445 Unclassified 1964
22 Ga0070663_100008353 3300005455 Bacteria 6362
23 Ga0070663_100016334 3300005455 Bacteria 4819
24 Ga0070698_100006306 3300005471 Bacteria 12879
25 Ga0070698_100150491 3300005471 Bacteria 2275
26 Ga0070699_100000188 3300005518 Bacteria 60070
27 Ga0070697_100001738 3300005536 Bacteria 16640
28 Ga0070697_100024846 3300005536 Bacteria 4772
29 Ga0070697_100279171 3300005536 Bacteria 1433
30 Ga0068853_100234341 3300005539 Bacteria 1680
31 Ga0068853_100360955 3300005539 Unclassified 1353
32 Ga0070695_100000657 3300005545 Bacteria 18437
33 Ga0070695_100001433 3300005545 Bacteria 13225
34 Ga0070696_100003154 3300005546 Bacteria 10976
35 Ga0070704_100001753 3300005549 Bacteria 11864
36 Ga0068857_100032690 3300005577 Bacteria 4599
37 Ga0068859_100011023 3300005617 Bacteria 9096
38 Ga0068861_100055105 3300005719 Bacteria 3031
39 Ga0068861_100377794 3300005719 Bacteria 1251
40 Ga0068863_100176707 3300005841 Unclassified 2049
41 Ga0068863_100593680 3300005841 Bacteria 1096
42 Ga0068860_100001347 3300005843 Bacteria 26688
43 Ga0068862_100008786 3300005844 Bacteria 8367
44 Ga0068862_100168229 3300005844 Unclassified 1961
45 Ga0081455_10001509 3300005937 Bacteria 28740
46 Ga0081540_1000493 3300005983 Bacteria 38816
47 Ga0081539_10000130 3300005985 Bacteria 178299
48 Ga0075365_10167225 3300006038 Unclassified 1534
49 Ga0075365_10169969 3300006038 Bacteria 1521
50 Ga0075365_10329101 3300006038 Bacteria 1076
51 Ga0075368_10006285 3300006042 Bacteria 4143
52 Ga0075363_100000073 3300006048 Bacteria 20975
53 Ga0075363_100084136 3300006048 Unclassified 1744
54 Ga0075364_10003182 3300006051 Bacteria 9298
55 Ga0075367_10003231 3300006178 Bacteria 7707
56 Ga0075367_10063898 3300006178 Bacteria 2201
57 Ga0075366_10083279 3300006195 Bacteria 1912
58 Ga0075366_10088307 3300006195 Unclassified 1856
59 Ga0075370_10052497 3300006353 Bacteria 2313
60 Ga0075428_100017736 3300006844 Bacteria 7866
61 Ga0075428_100484870 3300006844 Bacteria 1323
62 Ga0075430_100016861 3300006846 Bacteria 6222
63 Ga0075430_100073407 3300006846 Unclassified 2869
64 Ga0075430_100260184 3300006846 Bacteria 1437
65 Ga0075431_100000754 3300006847 Bacteria 27999
66 Ga0075431_100010686 3300006847 Bacteria 9223
67 Ga0075431_100273711 3300006847 Bacteria 1710
68 Ga0075433_10001904 3300006852 Bacteria 15702
69 Ga0075433_10166066 3300006852 Bacteria 1964
70 Ga0075434_100008413 3300006871 Bacteria 9594
71 Ga0075434_100186403 3300006871 Bacteria 2095
72 Ga0075429_100008818 3300006880 Bacteria 8769
73 Ga0097620_100011023 3300006931 Bacteria 9096
74 Ga0075435_100009544 3300007076 Bacteria 7035
75 Ga0075435_100020193 3300007076 Bacteria 5100
76 Ga0075435_100108367 3300007076 Unclassified 2308
77 Ga0111539_10018727 3300009094 Bacteria 8571
78 Ga0111539_10027305 3300009094 Bacteria 6971
79 Ga0111539_10034549 3300009094 Bacteria 6130
80 Ga0111539_10073210 3300009094 Bacteria 4039
81 Ga0105245_10325292 3300009098 Bacteria 1516
82 Ga0114129_10031125 3300009147 Bacteria 7546
83 Ga0114129_10094897 3300009147 Bacteria 4131
84 Ga0114129_10158544 3300009147 Bacteria 3094
85 Ga0114129_10204001 3300009147 Bacteria 2676
86 Ga0114129_10536554 3300009147 Bacteria 1523
87 Ga0105249_10004443 3300009553 Bacteria 12140
88 Ga0105249_10052509 3300009553 Unclassified 3722
89 Ga0105239_10153082 3300010375 Bacteria 2574
90 Ga0157380_10038847 3300014326 Unclassified 3698
91 Ga0157380_10182869 3300014326 Bacteria 1843
92 Ga0157380_10465278 3300014326 Bacteria 1218
93 Ga0207653_10000677 3300025885 Bacteria 11707
94 Ga0207707_10066827 3300025912 Bacteria 3131
95 Ga0207660_10010108 3300025917 Bacteria 6113
96 Ga0207659_10070362 3300025926 Bacteria 2552
97 Ga0207670_10215061 3300025936 Bacteria 1468
98 Ga0207689_10079407 3300025942 Bacteria 2697
99 Ga0207712_10000886 3300025961 Bacteria 21743
100 Ga0207668_10085294 3300025972 Unclassified 2304
101 Ga0207668_10494009 3300025972 Bacteria 1052
102 Ga0207678_10001844 3300026067 Bacteria 19420
103 Ga0207678_10016981 3300026067 Bacteria 6389
104 Ga0207708_10001520 3300026075 Bacteria 17286
105 Ga0207674_10007108 3300026116 Bacteria 13082
106 Ga0207675_100019376 3300026118 Bacteria 6347
107 Ga0207675_100078854 3300026118 Bacteria 3086
108 Ga0209813_10004935 3300027866 Bacteria 3216
109 Ga0207428_10005560 3300027907 Bacteria 11736
110 Ga0207428_10104755 3300027907 Bacteria 2182
111 Ga0268266_10197710 3300028379 Bacteria 1839
112 Ga0268266_10606066 3300028379 Bacteria 1052
113 Ga0268265_10001073 3300028380 Bacteria 24373
114 Ga0268264_10001789 3300028381 Bacteria 19645
115 Ga0307511_10000022 3300030521 Bacteria 116875
116 Ga0316576_10004511 3300031727 Bacteria 8367
117 Ga0373958_0001902 3300034819 Bacteria 2866
118 Ga0373958_0017642 3300034819 Bacteria 1285
119 Ga0373928_0008340 3300035084 Bacteria 2010
120 Ga0373929_0008957 3300035085 Bacteria 1849
121 Ga0373940_0006044 3300035088 Unclassified 2661
122 Ga0373939_0003767 3300035114 Bacteria 3575
123 Ga0373961_0013750 3300035241 Bacteria 2045
124 Ga0373962_0034510 3300035242 Bacteria 1401
125 Ga0373931_0001340 3300035691 Bacteria 10526
126 Ga0373931_0009547 3300035691 Bacteria 4640
127 Ga0316584_0012715 3300036712 Bacteria 5940
128 Ga0395900_0154311 3300037418 Bacteria 2346
129 Ga0395898_0110936 3300037466 Unclassified 2629
130 Ga0436365_0262153 3300039437 Bacteria 2047
131 Ga0453684_0035231 3300044712 Bacteria 6923
132 Ga0453684_0152406 3300044712 Bacteria 2745
133 Ga0495629_0060638 3300046459 Bacteria 2644
134 Ga0495637_0053504 3300046520 Bacteria 1680
135 Ga0495643_0116030 3300046522 Bacteria 1357
136 Ga0495587_0155681 3300046536 Bacteria 1302
137 Ga0495668_0109036 3300046616 Unclassified 1514
138 Ga0495657_0213674 3300046675 Unclassified 1172
139 Ga0495658_0259206 3300046683 Bacteria 1095
140 Ga0496101_0022859 3300048904 Bacteria 4311
141 Ga0496102_0014917 3300048905 Bacteria 6760
142 Ga0496102_0240483 3300048905 Bacteria 1707
143 Ga0496103_0003302 3300048906 Bacteria 9874
144 Ga0496104_0005274 3300048907 Bacteria 11296
145 Ga0496105_0182892 3300048908 Unclassified 1716
146 Ga0496106_0003196 3300048909 Bacteria 12258
147 Ga0496106_0160242 3300048909 Bacteria 1779
148 Ga0496107_0017213 3300048910 Bacteria 5084
149 Ga0496107_0472217 3300048910 Unclassified 931
150 Ga0496108_0003172 3300048911 Bacteria 13232
151 Ga0496108_0053895 3300048911 Bacteria 3374
152 Ga0496109_0003718 3300048912 Bacteria 12748
153 Ga0496109_0256665 3300048912 Bacteria 1646
154 Ga0496109_0272044 3300048912 Unclassified 1596
155 Ga0496110_0001272 3300048913 Bacteria 18044
156 Ga0496110_0155225 3300048913 Bacteria 2073
157 Ga0496111_0020679 3300048914 Bacteria 4586
158 Ga0496111_0069219 3300048914 Bacteria 2566
159 Ga0496112_0215071 3300048915 Bacteria 1879
160 Ga0496113_0003078 3300048916 Bacteria 9903
161 Ga0496113_0283395 3300048916 Bacteria 1325
162 Ga0496115_0224472 3300048918 Bacteria 1550
163 Ga0501032_0002559 3300049569 Bacteria 14233
164 Ga0501034_0000008 3300049571 Bacteria 354712
165 Ga0501034_0398613 3300049571 Bacteria 1299
166 Ga0501034_0512301 3300049571 Bacteria 1112
167 Ga0501036_0012045 3300049572 Bacteria 7167
168 Ga0501037_0001939 3300049573 Bacteria 14974
169 Ga0501038_0015329 3300049574 Bacteria 6968
170 Ga0501039_0000061 3300049575 Bacteria 85455
171 Ga0501039_0347593 3300049575 Unclassified 1165
172 Ga0501041_0025373 3300049577 Bacteria 3562
173 Ga0501041_0047222 3300049577 Unclassified 2621
174 Ga0501042_0027140 3300049578 Plasmid 4025
175 Ga0501046_0019507 3300049580 Bacteria 5624
176 Ga0501046_0024879 3300049580 Bacteria 4905
177 Ga0501047_0000095 3300049581 Bacteria 108671
178 Ga0501048_0000625 3300049582 Bacteria 25248
179 Ga0501067_0008407 3300049583 Bacteria 5730
180 Ga0501067_0065052 3300049583 Bacteria 2019
181 Ga0501070_0101020 3300049586 Bacteria 2386
182 Ga0501073_0055159 3300049589 Bacteria 2781
183 Ga0501074_0022759 3300049590 Bacteria 4556
184 Ga0501075_0040213 3300049591 Bacteria 3501
185 Ga0501076_0010461 3300049592 Bacteria 6886
186 Ga0501076_0195118 3300049592 Bacteria 1653
187 Ga0501076_0243178 3300049592 Bacteria 1472
188 Ga0501077_0006648 3300049593 Bacteria 7102
189 Ga0501077_0013680 3300049593 Bacteria 5086
190 Ga0501079_0010440 3300049741 Bacteria 7060
191 Ga0501079_0012035 3300049741 Bacteria 6602
192 Ga0501080_0000012 3300049742 Bacteria 108733
193 Ga0501080_0004155 3300049742 Bacteria 12838
194 Ga0501081_0022409 3300049743 Bacteria 4226
195 Ga0501081_0256796 3300049743 Bacteria 1276
196 Ga0501035_0000013 3300049822 Bacteria 255756
197 Ga0501044_0000004 3300049823 Bacteria 327475
198 Ga0501045_0016698 3300049824 Bacteria 5214
199 Ga0501045_0055566 3300049824 Bacteria 2895
200 nmdc:mga03n38_205829_c1 3300050490 Unclassified 1020
201 nmdc:mga03n38_7500_c1 3300050490 Bacteria 3863
202 nmdc:mga03n38_9696_c1 3300050490 Bacteria 3512
203 nmdc:mga00v17_10443_c1 3300050491 Bacteria 5071
204 nmdc:mga00v17_166375_c1 3300050491 Unclassified 1421
205 nmdc:mga00v17_6096_c1 3300050491 Bacteria 6381
206 nmdc:mga0yw44_226341_c1 3300050492 Bacteria 1241
207 nmdc:mga0yw44_27135_c1 3300050492 Bacteria 3277
208 nmdc:mga0yw44_286387_c1 3300050492 Bacteria 1102
209 nmdc:mga0k408_167159_c1 3300050493 Bacteria 1311
210 nmdc:mga0k408_71594_c2 3300050493 Bacteria 1618
211 nmdc:mga06z11_15027_c1 3300050494 Bacteria 3447
212 nmdc:mga06z11_540_c1 3300050494 Bacteria 13907
213 nmdc:mga04h51_5570_c1 3300050495 Bacteria 3216
214 nmdc:mga07m45_36366_c1 3300050496 Bacteria 2742
215 nmdc:mga05p37_336184_c1 3300050507 Unclassified 1782
216 nmdc:mga05p37_426505_c1 3300050507 Bacteria 1542
217 nmdc:mga05p37_87982_c1 3300050507 Bacteria 3829
218 nmdc:mga05p37_95616_c1 3300050507 Bacteria 3660
219 nmdc:mga09592_10615_c1 3300050508 Bacteria 7500
220 nmdc:mga09592_81769_c1 3300050508 Unclassified 2753
221 nmdc:mga0qj67_27158_c1 3300050509 Bacteria 4433
222 nmdc:mga06r32_14151_c1 3300050510 Bacteria 7235
223 nmdc:mga06r32_185851_c1 3300050510 Bacteria 2065
224 nmdc:mga06r32_54790_c1 3300050510 Bacteria 3824
225 nmdc:mga08y16_40731_c1 3300050511 Bacteria 4868
226 nmdc:mga08y16_69705_c1 3300050511 Bacteria 3666
227 nmdc:mga0n895_11832_c1 3300050512 Bacteria 7803
228 nmdc:mga0n895_4962_c1 3300050512 Bacteria 11038
229 nmdc:mga0rr50_34092_c1 3300050513 Bacteria 3643
230 nmdc:mga0a205_2038_c1 3300050515 Bacteria 17644
231 Ga0495619_0076726 3300053085 Bacteria 2244
232 Ga0500646_0016036 3300053090 Bacteria 1954
233 Ga0500556_0000159 3300053104 Bacteria 55421
234 Ga0500604_0003407 3300053151 Bacteria 4280
235 Ga0500616_0006481 3300053153 Bacteria 7659
236 Ga0500616_0014101 3300053153 Bacteria 4606
237 Ga0500616_0029215 3300053153 Unclassified 3035
238 Ga0500637_0238009 3300053178 Bacteria 1022
239 Ga0501084_0048265 3300054114 Bacteria 3564
240 Ga0501082_0020421 3300060353 Bacteria 5712
241 Ga0501082_0035382 3300060353 Bacteria 4304
242 Ga0501082_0070089 3300060353 Bacteria 3019
243 Ga0501082_0190327 3300060353 Bacteria 1785
244 Ga0530510_0008499 3300061734 Bacteria 7160
245 Ga0530510_0022241 3300061734 Unclassified 4516
246 Ga0530510_0038126 3300061734 Bacteria 3469
247 2989396504 2989392574 Bacteria 4554005
248 Ga0075428_100099604
249 JGI25406J46586_10040179
250 rootL2_10172378
251 Ga0065704_10042847
252 Ga0070690_100003345
253 Ga0070680_100419361
254 Ga0070689_100280243
255 Ga0070691_10005519
256 Ga0070691_10037020
257 Ga0070669_100314225
258 Ga0070675_100014903
259 Ga0070659_100167522
260 Ga0070667_100476337
261 Ga0070703_10002070
262 Ga0070701_10007494
263 Ga0070701_10008299
264 Ga0070705_100000908
265 Ga0070700_100001322
266 Ga0070694_100000725
267 Ga0070708_100021118
268 Ga0070708_100182016
269 Ga0070663_100008353
270 Ga0070663_100016334
271 Ga0070698_100006306
272 Ga0070698_100150491
273 Ga0070699_100000188
274 Ga0070697_100001738
275 Ga0070697_100024846
276 Ga0070697_100279171
277 Ga0068853_100234341
278 Ga0068853_100360955
279 Ga0070695_100000657
280 Ga0070695_100001433
281 Ga0070696_100003154
282 Ga0070704_100001753
283 Ga0068857_100032690
284 Ga0068859_100011023
285 Ga0068861_100055105
286 Ga0068861_100377794
287 Ga0068863_100176707
288 Ga0068863_100593680
289 Ga0068860_100001347
290 Ga0068862_100008786
291 Ga0068862_100168229
292 Ga0081455_10001509
293 Ga0081540_1000493
294 Ga0081539_10000130
295 Ga0075365_10167225
296 Ga0075365_10169969
297 Ga0075365_10329101
298 Ga0075368_10006285
299 Ga0075363_100000073
300 Ga0075363_100084136
301 Ga0075364_10003182
302 Ga0075367_10003231
303 Ga0075367_10063898
304 Ga0075366_10083279
305 Ga0075366_10088307
306 Ga0075370_10052497
307 Ga0075428_100017736
308 Ga0075428_100484870
309 Ga0075430_100016861
310 Ga0075430_100073407
311 Ga0075430_100260184
312 Ga0075431_100000754
313 Ga0075431_100010686
314 Ga0075431_100273711
315 Ga0075433_10001904
316 Ga0075433_10166066
317 Ga0075434_100008413
318 Ga0075434_100186403
319 Ga0075429_100008818
320 Ga0097620_100011023
321 Ga0075435_100009544
322 Ga0075435_100020193
323 Ga0075435_100108367
324 Ga0111539_10018727
325 Ga0111539_10027305
326 Ga0111539_10034549
327 Ga0111539_10073210
328 Ga0105245_10325292
329 Ga0114129_10031125
330 Ga0114129_10094897
331 Ga0114129_10158544
332 Ga0114129_10204001
333 Ga0114129_10536554
334 Ga0105249_10004443
335 Ga0105249_10052509
336 Ga0105239_10153082
337 Ga0157380_10038847
338 Ga0157380_10182869
339 Ga0157380_10465278
340 Ga0207653_10000677
341 Ga0207707_10066827
342 Ga0207660_10010108
343 Ga0207659_10070362
344 Ga0207670_10215061
345 Ga0207689_10079407
346 Ga0207712_10000886
347 Ga0207668_10085294
348 Ga0207668_10494009
349 Ga0207678_10001844
350 Ga0207678_10016981
351 Ga0207708_10001520
352 Ga0207674_10007108
353 Ga0207675_100019376
354 Ga0207675_100078854
355 Ga0209813_10004935
356 Ga0207428_10005560
357 Ga0207428_10104755
358 Ga0268266_10197710
359 Ga0268266_10606066
360 Ga0268265_10001073
361 Ga0268264_10001789
362 Ga0307511_10000022
363 Ga0316576_10004511
364 Ga0373958_0001902
365 Ga0373958_0017642
366 Ga0373928_0008340
367 Ga0373929_0008957
368 Ga0373940_0006044
369 Ga0373939_0003767
370 Ga0373961_0013750
371 Ga0373962_0034510
372 Ga0373931_0001340
373 Ga0373931_0009547
374 Ga0316584_0012715
375 Ga0395900_0154311
376 Ga0395898_0110936
377 Ga0436365_0262153
378 Ga0453684_0035231
379 Ga0453684_0152406
380 Ga0495629_0060638
381 Ga0495637_0053504
382 Ga0495643_0116030
383 Ga0495587_0155681
384 Ga0495668_0109036
385 Ga0495657_0213674
386 Ga0495658_0259206
387 Ga0496101_0022859
388 Ga0496102_0014917
389 Ga0496102_0240483
390 Ga0496103_0003302
391 Ga0496104_0005274
392 Ga0496105_0182892
393 Ga0496106_0003196
394 Ga0496106_0160242
395 Ga0496107_0017213
396 Ga0496107_0472217
397 Ga0496108_0003172
398 Ga0496108_0053895
399 Ga0496109_0003718
400 Ga0496109_0256665
401 Ga0496109_0272044
402 Ga0496110_0001272
403 Ga0496110_0155225
404 Ga0496111_0020679
405 Ga0496111_0069219
406 Ga0496112_0215071
407 Ga0496113_0003078
408 Ga0496113_0283395
409 Ga0496115_0224472
410 Ga0501032_0002559
411 Ga0501034_0000008
412 Ga0501034_0398613
413 Ga0501034_0512301
414 Ga0501036_0012045
415 Ga0501037_0001939
416 Ga0501038_0015329
417 Ga0501039_0000061
418 Ga0501039_0347593
419 Ga0501041_0025373
420 Ga0501041_0047222
421 Ga0501042_0027140
422 Ga0501046_0019507
423 Ga0501046_0024879
424 Ga0501047_0000095
425 Ga0501048_0000625
426 Ga0501067_0008407
427 Ga0501067_0065052
428 Ga0501070_0101020
429 Ga0501073_0055159
430 Ga0501074_0022759
431 Ga0501075_0040213
432 Ga0501076_0010461
433 Ga0501076_0195118
434 Ga0501076_0243178
435 Ga0501077_0006648
436 Ga0501077_0013680
437 Ga0501079_0010440
438 Ga0501079_0012035
439 Ga0501080_0000012
440 Ga0501080_0004155
441 Ga0501081_0022409
442 Ga0501081_0256796
443 Ga0501035_0000013
444 Ga0501044_0000004
445 Ga0501045_0016698
446 Ga0501045_0055566
447 nmdc:mga03n38_205829_c1
448 nmdc:mga03n38_7500_c1
449 nmdc:mga03n38_9696_c1
450 nmdc:mga00v17_10443_c1
451 nmdc:mga00v17_166375_c1
452 nmdc:mga00v17_6096_c1
453 nmdc:mga0yw44_226341_c1
454 nmdc:mga0yw44_27135_c1
455 nmdc:mga0yw44_286387_c1
456 nmdc:mga0k408_167159_c1
457 nmdc:mga0k408_71594_c2
458 nmdc:mga06z11_15027_c1
459 nmdc:mga06z11_540_c1
460 nmdc:mga04h51_5570_c1
461 nmdc:mga07m45_36366_c1
462 nmdc:mga05p37_336184_c1
463 nmdc:mga05p37_426505_c1
464 nmdc:mga05p37_87982_c1
465 nmdc:mga05p37_95616_c1
466 nmdc:mga09592_10615_c1
467 nmdc:mga09592_81769_c1
468 nmdc:mga0qj67_27158_c1
469 nmdc:mga06r32_14151_c1
470 nmdc:mga06r32_185851_c1
471 nmdc:mga06r32_54790_c1
472 nmdc:mga08y16_40731_c1
473 nmdc:mga08y16_69705_c1
474 nmdc:mga0n895_11832_c1
475 nmdc:mga0n895_4962_c1
476 nmdc:mga0rr50_34092_c1
477 nmdc:mga0a205_2038_c1
478 Ga0495619_0076726
479 Ga0500646_0016036
480 Ga0500556_0000159
481 Ga0500604_0003407
482 Ga0500616_0006481
483 Ga0500616_0014101
484 Ga0500616_0029215
485 Ga0500637_0238009
486 Ga0501084_0048265
487 Ga0501082_0020421
488 Ga0501082_0035382
489 Ga0501082_0070089
490 Ga0501082_0190327
491 Ga0530510_0008499
492 Ga0530510_0022241
493 Ga0530510_0038126
494 2989396504

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

55

342

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7agh-assembly1.cif.gz_B crystal structure of sf kinase yihv from e. coli in complex with amppnp-mg 0.8838 15 279
7agh-assembly2.cif.gz_A crystal structure of sf kinase yihv from e. coli in complex with amppnp-mg 0.8784 14 279
2rbc-assembly1.cif.gz_A-2 crystal structure of a putative ribokinase from agrobacterium tumefaciens 0.8784 15 280
4xda-assembly1.cif.gz_A vibrio cholerae o395 ribokinase complexed with ribose, adp and sodium ion. 0.8737 13 282
8cqx-assembly1.cif.gz_A ribokinase from t.sp mutant a92g 0.8725 15 278
ID Description Score Start End Superfamily
af_F4K7C7_15_348_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8968 16 265 3.40.1190.20
af_P32143_2_297_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.888 15 279 3.40.1190.20
af_Q19133_1_311_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8602 10 276 3.40.1190.20
af_Q9VW84_5_299_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8503 14 265 3.40.1190.20
af_Q9SX54_1_210_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8467 106 281 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A7V9SXX7-F1-model_v4 Carbohydrate kinase family protein 0.9709 1 279 GO:0016301
AF-A0A7V9GA71-F1-model_v4 Carbohydrate kinase family protein 0.9679 182 281 GO:0006796
GO:0016301
AF-A0A2V8T551-F1-model_v4 Ribokinase 0.9668 2 280 GO:0016301
AF-A0A2V8RBH9-F1-model_v4 Ribokinase 0.9622 1 282 GO:0016301
AF-A0A257VNH7-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9576 109 279

Map