F358913

General Info

Members Datasets Scaffolds Average Seq Length
247 190 495 921

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100001927|Ga0075430_1000019276
Length 992
Sequence LADVSPPPSPRLFLIDGYALIYRAFFALISRPLTTSKGENTSAAWGIANFLLRLSANHHPDYIGWVNDSGLSFRHETYPAYKATREKLTEELQADFDRGMERISEILDAHKVPVLTLRGYEADDVIGTLAKQGAAAGLNVAIVSGDKDFQQLVQPRVWLLNPGRGGPAGVEEQWVSVDNASERLGVPPDRVVDYLALVGDSSDNVPGVPGIGDKTARELVNEYGALESILDAAERITKKRPREALLEHAARARLSKQLVTIRDDLPIQLDVERLRVQTPDAARLRQLYVELEFTTLVKDVSPAPVASATTRASYTTVDSIQALERLTTRARRAPYIAIDTQTIVPSGSLTNADPLRARLVAMAVAVGEGEAYYLPFAHREWYPAQGELLIDASGDRAPTDAPEDRGLVRGGDETGEDSDGVTAASRSRPKAKKTTNAPPTSIAARLLAERPQQVKNLPPLDSEAMTPLRELLEDEAIRKTAQNAKYDLLALRRMGITLRGLDFDSMLASYVLDPGRRSHGLDVLALEFLDHTMASYEELCGKGKNEIPFDACPVEAARDYSCEEADIAFRMRAVLEPQLEAHGLTPLFHEIEIPLLQVLADMEWAGVSIDLPWFASLKERFRRERERVEKEIYEEAGEHFNINSNLQLRTILFEKLQLPIRKRTSTGPSTDASVLQELAEAGHTLPQLLMEYRELSKLESTYLDTLPSLIHADDGRLHTSFNQTVASTGRLSSSDPNLQNIPIRRELGRDIRRGFIPRKGWLLLAADYSQIELRLLAHLSNDPAFVDAFKSGGDIHRQTASIIFGVAVDDVTAEMRARAKTINFATIYGQGAHALSRQLKISNAEAKAFIATYFERFRGIREYLDSMVQFARDHGYVETIFRRRRYIPELRDRNFNIRAFGERTAANSPIQGSAADLIKIAMIRIDSTLRKRRLQSRMILQVHDELVFEFPPQEQEDLASLVRTEMEHAADLSVPLVVDVGVGDSWLATKMG

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
101 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
104 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
107 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
108 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
120 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
121 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
131 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
132 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
133 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
134 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
140 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
144 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
145 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
166 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
181 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
182 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
183 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
186 2738541278 Niastella sp. CF465 Isolate Unclassified
187 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
188 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
189 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
190 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.57
Metatranscriptomes 0
Isolates 2.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.62
Nodule 0
Rhizoplane 1.62
Rhizosphere 93.93
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100001927 3300006846 Bacteria 17028
2 rootH1_10044460 3300003316 Bacteria 10176
3 rootH1_10044460 3300003323 Bacteria 12555
4 rootH1_10168435 3300003323 Bacteria 6383
5 Ga0065712_10074568 3300005290 Bacteria 4057
6 Ga0070683_100001542 3300005329 Bacteria 17836
7 Ga0070683_100008260 3300005329 Bacteria 8846
8 Ga0070683_100023483 3300005329 Bacteria 5516
9 Ga0070683_100057182 3300005329 Bacteria 3623
10 Ga0070690_100002492 3300005330 Bacteria 9900
11 Ga0070670_100049237 3300005331 Bacteria 3623
12 Ga0070682_100000011 3300005337 Bacteria 266253
13 Ga0068868_100000033 3300005338 Bacteria 75402
14 Ga0070689_100014715 3300005340 Bacteria 5691
15 Ga0070687_100001536 3300005343 Bacteria 8176
16 Ga0070661_100000857 3300005344 Bacteria 21844
17 Ga0070668_100003401 3300005347 Bacteria 11745
18 Ga0070669_100003452 3300005353 Bacteria 11390
19 Ga0070669_100007139 3300005353 Bacteria 8027
20 Ga0070675_100000025 3300005354 Bacteria 115134
21 Ga0070675_100006972 3300005354 Bacteria 8682
22 Ga0070671_100004833 3300005355 Bacteria 10714
23 Ga0070674_100006931 3300005356 Bacteria 6645
24 Ga0070674_100025909 3300005356 Bacteria 3824
25 Ga0070659_100000043 3300005366 Bacteria 102267
26 Ga0070713_100001017 3300005436 Bacteria 17941
27 Ga0070710_10000003 3300005437 Bacteria 277772
28 Ga0070694_100004057 3300005444 Bacteria 8776
29 Ga0070663_100020296 3300005455 Bacteria 4397
30 Ga0070662_100000002 3300005457 Bacteria 253208
31 Ga0070662_100016714 3300005457 Bacteria 4932
32 Ga0070681_10000126 3300005458 Bacteria 57455
33 Ga0068867_100028868 3300005459 Bacteria 3995
34 Ga0070706_100006069 3300005467 Bacteria 11418
35 Ga0070698_100014688 3300005471 Bacteria 8270
36 Ga0070679_100004655 3300005530 Bacteria 12660
37 Ga0070679_100005030 3300005530 Bacteria 12201
38 Ga0070679_100041260 3300005530 Bacteria 4592
39 Ga0070684_100012211 3300005535 Bacteria 6873
40 Ga0070697_100000583 3300005536 Bacteria 27539
41 Ga0068853_100010313 3300005539 Bacteria 7556
42 Ga0070686_100007976 3300005544 Bacteria 5919
43 Ga0070693_100000102 3300005547 Bacteria 37722
44 Ga0070693_100001145 3300005547 Bacteria 11904
45 Ga0070664_100005264 3300005564 Bacteria 10383
46 Ga0070664_100006419 3300005564 Bacteria 9488
47 Ga0070664_100046906 3300005564 Bacteria 3650
48 Ga0068857_100001701 3300005577 Bacteria 17683
49 Ga0068857_100012572 3300005577 Bacteria 7374
50 Ga0068852_100008114 3300005616 Bacteria 7707
51 Ga0068852_100026142 3300005616 Bacteria 4740
52 Ga0068864_100004188 3300005618 Bacteria 11855
53 Ga0068851_10001953 3300005834 Bacteria 9061
54 Ga0068858_100000069 3300005842 Bacteria 105617
55 Ga0068860_100006422 3300005843 Bacteria 11804
56 Ga0068862_100003451 3300005844 Bacteria 13600
57 Ga0081538_10009176 3300005981 Bacteria 8292
58 Ga0070716_100030986 3300006173 Bacteria 2906
59 Ga0097621_100010212 3300006237 Bacteria 6856
60 Ga0075430_100005742 3300006846 Bacteria 10468
61 Ga0075430_100014395 3300006846 Bacteria 6742
62 Ga0075431_100007628 3300006847 Bacteria 10775
63 Ga0075431_100008002 3300006847 Bacteria 10546
64 Ga0075431_100049716 3300006847 Bacteria 4323
65 Ga0075434_100002541 3300006871 Bacteria 16098
66 Ga0075429_100025034 3300006880 Bacteria 5181
67 Ga0075436_100014757 3300006914 Bacteria 5354
68 Ga0075436_100036320 3300006914 Bacteria 3400
69 Ga0099794_10002097 3300007265 Bacteria 7249
70 Ga0099794_10004594 3300007265 Bacteria 5446
71 Ga0105240_10060302 3300009093 Bacteria 4730
72 Ga0105240_10064392 3300009093 Bacteria 4555
73 Ga0111539_10027434 3300009094 Bacteria 6956
74 Ga0114129_10005392 3300009147 Bacteria 18054
75 Ga0114129_10007464 3300009147 Bacteria 15574
76 Ga0105248_10000175 3300009177 Bacteria 74795
77 Ga0105248_10009618 3300009177 Bacteria 10644
78 Ga0105249_10000577 3300009553 Bacteria 33686
79 Ga0105239_10014184 3300010375 Bacteria 8843
80 Ga0105239_10048586 3300010375 Bacteria 4652
81 Ga0105246_10009668 3300011119 Bacteria 5943
82 Ga0105246_10020085 3300011119 Bacteria 4281
83 Ga0157326_1000127 3300012513 Bacteria 8072
84 Ga0157373_10005796 3300013100 Bacteria 9249
85 Ga0157369_10003623 3300013105 Bacteria 18334
86 Ga0157374_10002210 3300013296 Bacteria 16407
87 Ga0157378_10001476 3300013297 Bacteria 21250
88 Ga0157378_10008941 3300013297 Bacteria 8719
89 Ga0157378_10010027 3300013297 Bacteria 8259
90 Ga0163162_10001162 3300013306 Bacteria 24548
91 Ga0157372_10004167 3300013307 Bacteria 15473
92 Ga0157372_10030518 3300013307 Bacteria 5897
93 Ga0157380_10023154 3300014326 Bacteria 4684
94 Ga0163161_10007913 3300017792 Bacteria 7358
95 Ga0213876_10001413 3300021384 Bacteria 14963
96 Ga0207697_10005810 3300025315 Bacteria 5681
97 Ga0207656_10000338 3300025321 Bacteria 15926
98 Ga0207692_10000002 3300025898 Bacteria 453100
99 Ga0207692_10000008 3300025898 Bacteria 183372
100 Ga0207688_10004060 3300025901 Bacteria 7977
101 Ga0207647_10010204 3300025904 Bacteria 6637
102 Ga0207645_10004772 3300025907 Bacteria 9968
103 Ga0207684_10008943 3300025910 Bacteria 8881
104 Ga0207707_10003277 3300025912 Bacteria 14384
105 Ga0207695_10067739 3300025913 Bacteria 3660
106 Ga0207662_10000205 3300025918 Bacteria 27418
107 Ga0207662_10002777 3300025918 Bacteria 8852
108 Ga0207657_10002631 3300025919 Bacteria 19391
109 Ga0207649_10001849 3300025920 Bacteria 12097
110 Ga0207649_10006607 3300025920 Bacteria 6301
111 Ga0207652_10004340 3300025921 Bacteria 11555
112 Ga0207681_10002116 3300025923 Bacteria 12724
113 Ga0207659_10004089 3300025926 Bacteria 8800
114 Ga0207687_10000851 3300025927 Bacteria 20636
115 Ga0207700_10000003 3300025928 Bacteria 500797
116 Ga0207690_10000095 3300025932 Bacteria 73025
117 Ga0207690_10031054 3300025932 Bacteria 3414
118 Ga0207706_10000001 3300025933 Bacteria 423014
119 Ga0207706_10000083 3300025933 Bacteria 98149
120 Ga0207706_10002123 3300025933 Bacteria 19419
121 Ga0207706_10041910 3300025933 Bacteria 4057
122 Ga0207670_10008557 3300025936 Bacteria 5785
123 Ga0207665_10000020 3300025939 Bacteria 117316
124 Ga0207691_10001318 3300025940 Bacteria 24755
125 Ga0207691_10001974 3300025940 Bacteria 20055
126 Ga0207691_10009679 3300025940 Bacteria 9246
127 Ga0207711_10000006 3300025941 Bacteria 792692
128 Ga0207689_10000507 3300025942 Bacteria 36827
129 Ga0207661_10004795 3300025944 Bacteria 9471
130 Ga0207661_10031129 3300025944 Bacteria 4117
131 Ga0207679_10000207 3300025945 Bacteria 46864
132 Ga0207679_10012405 3300025945 Bacteria 5557
133 Ga0207712_10003384 3300025961 Bacteria 10084
134 Ga0207712_10029912 3300025961 Bacteria 3658
135 Ga0207640_10011538 3300025981 Bacteria 5006
136 Ga0207677_10000343 3300026023 Bacteria 33031
137 Ga0207678_10009533 3300026067 Bacteria 8541
138 Ga0207648_10004038 3300026089 Bacteria 15234
139 Ga0207648_10041281 3300026089 Bacteria 4052
140 Ga0207674_10000044 3300026116 Bacteria 123506
141 Ga0207674_10001569 3300026116 Bacteria 29436
142 Ga0207675_100000678 3300026118 Bacteria 33528
143 Ga0207675_100004589 3300026118 Bacteria 13311
144 Ga0207683_10029596 3300026121 Bacteria 4742
145 Ga0265354_1000916 3300028016 Bacteria 4684
146 Ga0268266_10000491 3300028379 Bacteria 56615
147 Ga0268264_10007826 3300028381 Bacteria 8893
148 Ga0265319_1000575 3300028563 Bacteria 24713
149 Ga0265318_10000123 3300028577 Bacteria 71866
150 Ga0265320_10000100 3300031240 Bacteria 73384
151 Ga0265329_10000840 3300031242 Bacteria 15544
152 Ga0265340_10000846 3300031247 Bacteria 17411
153 Ga0265339_10008586 3300031249 Bacteria 6489
154 Ga0265331_10000047 3300031250 Bacteria 183230
155 Ga0265316_10000204 3300031344 Bacteria 69064
156 Ga0307408_100002978 3300031548 Bacteria 11729
157 Ga0265313_10002769 3300031595 Bacteria 14783
158 Ga0265314_10002272 3300031711 Bacteria 19894
159 Ga0265342_10000158 3300031712 Bacteria 76866
160 Ga0316577_10022877 3300031733 Bacteria 3471
161 Ga0307406_10005890 3300031901 Bacteria 6727
162 Ga0373955_0013624 3300035172 Bacteria 3938
163 Ga0436365_0450598 3300039437 Bacteria 38661
164 Ga0439457_000862 3300042014 Bacteria 9149
165 Ga0439462_0001112 3300042015 Bacteria 5817
166 Ga0466969_0003116 3300044656 Bacteria 8835
167 Ga0453683_0005025 3300044673 Bacteria 9294
168 Ga0466961_0003525 3300044693 Bacteria 9757
169 Ga0453684_0010804 3300044712 Bacteria 15481
170 Ga0466957_0001167 3300044842 Bacteria 13622
171 Ga0466959_0013110 3300045049 Bacteria 6003
172 Ga0451576_0000264 3300045051 Bacteria 128283
173 Ga0466967_0008002 3300045976 Bacteria 7699
174 Ga0495651_0001527 3300046462 Bacteria 17899
175 Ga0495651_0002436 3300046462 Bacteria 14364
176 Ga0495653_0017098 3300046463 Bacteria 5901
177 Ga0495662_0000001 3300046476 Bacteria 179185
178 Ga0495608_0012607 3300046511 Bacteria 5864
179 Ga0495618_0025159 3300046514 Bacteria 3693
180 Ga0495628_0000752 3300046516 Bacteria 29928
181 Ga0495628_0049149 3300046516 Bacteria 3340
182 Ga0495652_0003733 3300046529 Bacteria 14903
183 Ga0495640_0007353 3300046533 Bacteria 8669
184 Ga0495587_0000895 3300046536 Bacteria 19737
185 Ga0495587_0015172 3300046536 Bacteria 4814
186 Ga0495645_0010193 3300046543 Bacteria 6585
187 Ga0495667_0001033 3300046559 Bacteria 18038
188 Ga0495667_0028302 3300046559 Bacteria 3773
189 Ga0495634_0000045 3300046642 Bacteria 99087
190 Ga0495599_0026291 3300046678 Bacteria 3647
191 Ga0495613_0000220 3300046689 Bacteria 55692
192 Ga0495600_0001640 3300046809 Bacteria 12481
193 Ga0495604_0003263 3300047317 Bacteria 12966
194 Ga0495674_0015533 3300047319 Bacteria 7114
195 Ga0495680_0001800 3300047322 Bacteria 22685
196 Ga0495680_0003185 3300047322 Bacteria 16332
197 Ga0495675_0000423 3300047444 Bacteria 28640
198 Ga0495602_0022014 3300048088 Bacteria 6251
199 Ga0496105_0005484 3300048908 Bacteria 9626
200 Ga0496109_0000056 3300048912 Bacteria 120835
201 Ga0496110_0000566 3300048913 Bacteria 25337
202 Ga0496111_0000047 3300048914 Bacteria 47782
203 Ga0501031_0003337 3300049568 Bacteria 10302
204 Ga0501033_0005068 3300049570 Bacteria 10483
205 Ga0501034_0007543 3300049571 Bacteria 11573
206 Ga0501034_0009064 3300049571 Bacteria 10450
207 Ga0501036_0005532 3300049572 Bacteria 10249
208 Ga0501037_0004460 3300049573 Bacteria 10169
209 Ga0501038_0007333 3300049574 Bacteria 10174
210 Ga0501039_0005212 3300049575 Bacteria 9838
211 Ga0501043_0007662 3300049579 Bacteria 8553
212 Ga0501046_0006769 3300049580 Bacteria 10117
213 Ga0501047_0007566 3300049581 Bacteria 10221
214 Ga0501048_0004872 3300049582 Bacteria 10238
215 Ga0501070_0006095 3300049586 Bacteria 10272
216 Ga0501073_0005032 3300049589 Bacteria 9910
217 Ga0501247_000807 3300049677 Bacteria 2735
218 Ga0501083_0004325 3300049744 Bacteria 10004
219 Ga0501035_0007421 3300049822 Bacteria 10237
220 Ga0501044_0001624 3300049823 Bacteria 26339
221 Ga0501045_0011989 3300049824 Bacteria 6093
222 nmdc:mga05p37_43956_c1 3300050507 Bacteria 5496
223 nmdc:mga09592_10702_c1 3300050508 Bacteria 7467
224 nmdc:mga09592_38634_c1 3300050508 Bacteria 4007
225 nmdc:mga0qj67_35007_c1 3300050509 Bacteria 3925
226 nmdc:mga0qj67_50528_c1 3300050509 Bacteria 3288
227 nmdc:mga06r32_2827_c1 3300050510 Bacteria 15571
228 nmdc:mga06r32_39166_c1 3300050510 Bacteria 4496
229 nmdc:mga06r32_5390_c1 3300050510 Bacteria 8487
230 nmdc:mga08y16_48589_c1 3300050511 Bacteria 4440
231 nmdc:mga0n895_1014_c1 3300050512 Bacteria 20403
232 nmdc:mga08x19_4300_c1 3300050514 Bacteria 8438
233 nmdc:mga0a205_19643_c1 3300050515 Bacteria 6373
234 nmdc:mga0a205_4240_c1 3300050515 Bacteria 12859
235 Ga0495619_0000010 3300053085 Bacteria 302390
236 Ga0495619_0000376 3300053085 Bacteria 30790
237 Ga0500658_0010593 3300053134 Bacteria 3401
238 Ga0500604_0000887 3300053151 Bacteria 8262
239 Ga0500622_0000075 3300053156 Bacteria 109513
240 Ga0500622_0000086 3300053156 Bacteria 99366
241 Ga0501084_0075653 3300054114 Bacteria 2821
242 Ga0501082_0006499 3300060353 Bacteria 10130
243 2688069170 2687453257 Bacteria 6784659
244 2738725280 2738541278 Bacteria 9755573
245 2819574981 2818991442 Bacteria 8318214
246 2889420844 2889415604 Bacteria 8048700
247 2910245795 2910245624 Bacteria 6935613
248 2920112026 2920107658 Bacteria 10042636
249 Ga0075430_100001927
250 rootH1_10044460
251 rootH1_10168435
252 Ga0065712_10074568
253 Ga0070683_100001542
254 Ga0070683_100008260
255 Ga0070683_100023483
256 Ga0070683_100057182
257 Ga0070690_100002492
258 Ga0070670_100049237
259 Ga0070682_100000011
260 Ga0068868_100000033
261 Ga0070689_100014715
262 Ga0070687_100001536
263 Ga0070661_100000857
264 Ga0070668_100003401
265 Ga0070669_100003452
266 Ga0070669_100007139
267 Ga0070675_100000025
268 Ga0070675_100006972
269 Ga0070671_100004833
270 Ga0070674_100006931
271 Ga0070674_100025909
272 Ga0070659_100000043
273 Ga0070713_100001017
274 Ga0070710_10000003
275 Ga0070694_100004057
276 Ga0070663_100020296
277 Ga0070662_100000002
278 Ga0070662_100016714
279 Ga0070681_10000126
280 Ga0068867_100028868
281 Ga0070706_100006069
282 Ga0070698_100014688
283 Ga0070679_100004655
284 Ga0070679_100005030
285 Ga0070679_100041260
286 Ga0070684_100012211
287 Ga0070697_100000583
288 Ga0068853_100010313
289 Ga0070686_100007976
290 Ga0070693_100000102
291 Ga0070693_100001145
292 Ga0070664_100005264
293 Ga0070664_100006419
294 Ga0070664_100046906
295 Ga0068857_100001701
296 Ga0068857_100012572
297 Ga0068852_100008114
298 Ga0068852_100026142
299 Ga0068864_100004188
300 Ga0068851_10001953
301 Ga0068858_100000069
302 Ga0068860_100006422
303 Ga0068862_100003451
304 Ga0081538_10009176
305 Ga0070716_100030986
306 Ga0097621_100010212
307 Ga0075430_100005742
308 Ga0075430_100014395
309 Ga0075431_100007628
310 Ga0075431_100008002
311 Ga0075431_100049716
312 Ga0075434_100002541
313 Ga0075429_100025034
314 Ga0075436_100014757
315 Ga0075436_100036320
316 Ga0099794_10002097
317 Ga0099794_10004594
318 Ga0105240_10060302
319 Ga0105240_10064392
320 Ga0111539_10027434
321 Ga0114129_10005392
322 Ga0114129_10007464
323 Ga0105248_10000175
324 Ga0105248_10009618
325 Ga0105249_10000577
326 Ga0105239_10014184
327 Ga0105239_10048586
328 Ga0105246_10009668
329 Ga0105246_10020085
330 Ga0157326_1000127
331 Ga0157373_10005796
332 Ga0157369_10003623
333 Ga0157374_10002210
334 Ga0157378_10001476
335 Ga0157378_10008941
336 Ga0157378_10010027
337 Ga0163162_10001162
338 Ga0157372_10004167
339 Ga0157372_10030518
340 Ga0157380_10023154
341 Ga0163161_10007913
342 Ga0213876_10001413
343 Ga0207697_10005810
344 Ga0207656_10000338
345 Ga0207692_10000002
346 Ga0207692_10000008
347 Ga0207688_10004060
348 Ga0207647_10010204
349 Ga0207645_10004772
350 Ga0207684_10008943
351 Ga0207707_10003277
352 Ga0207695_10067739
353 Ga0207662_10000205
354 Ga0207662_10002777
355 Ga0207657_10002631
356 Ga0207649_10001849
357 Ga0207649_10006607
358 Ga0207652_10004340
359 Ga0207681_10002116
360 Ga0207659_10004089
361 Ga0207687_10000851
362 Ga0207700_10000003
363 Ga0207690_10000095
364 Ga0207690_10031054
365 Ga0207706_10000001
366 Ga0207706_10000083
367 Ga0207706_10002123
368 Ga0207706_10041910
369 Ga0207670_10008557
370 Ga0207665_10000020
371 Ga0207691_10001318
372 Ga0207691_10001974
373 Ga0207691_10009679
374 Ga0207711_10000006
375 Ga0207689_10000507
376 Ga0207661_10004795
377 Ga0207661_10031129
378 Ga0207679_10000207
379 Ga0207679_10012405
380 Ga0207712_10003384
381 Ga0207712_10029912
382 Ga0207640_10011538
383 Ga0207677_10000343
384 Ga0207678_10009533
385 Ga0207648_10004038
386 Ga0207648_10041281
387 Ga0207674_10000044
388 Ga0207674_10001569
389 Ga0207675_100000678
390 Ga0207675_100004589
391 Ga0207683_10029596
392 Ga0265354_1000916
393 Ga0268266_10000491
394 Ga0268264_10007826
395 Ga0265319_1000575
396 Ga0265318_10000123
397 Ga0265320_10000100
398 Ga0265329_10000840
399 Ga0265340_10000846
400 Ga0265339_10008586
401 Ga0265331_10000047
402 Ga0265316_10000204
403 Ga0307408_100002978
404 Ga0265313_10002769
405 Ga0265314_10002272
406 Ga0265342_10000158
407 Ga0316577_10022877
408 Ga0307406_10005890
409 Ga0373955_0013624
410 Ga0436365_0450598
411 Ga0439457_000862
412 Ga0439462_0001112
413 Ga0466969_0003116
414 Ga0453683_0005025
415 Ga0466961_0003525
416 Ga0453684_0010804
417 Ga0466957_0001167
418 Ga0466959_0013110
419 Ga0451576_0000264
420 Ga0466967_0008002
421 Ga0495651_0001527
422 Ga0495651_0002436
423 Ga0495653_0017098
424 Ga0495662_0000001
425 Ga0495608_0012607
426 Ga0495618_0025159
427 Ga0495628_0000752
428 Ga0495628_0049149
429 Ga0495652_0003733
430 Ga0495640_0007353
431 Ga0495587_0000895
432 Ga0495587_0015172
433 Ga0495645_0010193
434 Ga0495667_0001033
435 Ga0495667_0028302
436 Ga0495634_0000045
437 Ga0495599_0026291
438 Ga0495613_0000220
439 Ga0495600_0001640
440 Ga0495604_0003263
441 Ga0495674_0015533
442 Ga0495680_0001800
443 Ga0495680_0003185
444 Ga0495675_0000423
445 Ga0495602_0022014
446 Ga0496105_0005484
447 Ga0496109_0000056
448 Ga0496110_0000566
449 Ga0496111_0000047
450 Ga0501031_0003337
451 Ga0501033_0005068
452 Ga0501034_0007543
453 Ga0501034_0009064
454 Ga0501036_0005532
455 Ga0501037_0004460
456 Ga0501038_0007333
457 Ga0501039_0005212
458 Ga0501043_0007662
459 Ga0501046_0006769
460 Ga0501047_0007566
461 Ga0501048_0004872
462 Ga0501070_0006095
463 Ga0501073_0005032
464 Ga0501247_000807
465 Ga0501083_0004325
466 Ga0501035_0007421
467 Ga0501044_0001624
468 Ga0501045_0011989
469 nmdc:mga05p37_43956_c1
470 nmdc:mga09592_10702_c1
471 nmdc:mga09592_38634_c1
472 nmdc:mga0qj67_35007_c1
473 nmdc:mga0qj67_50528_c1
474 nmdc:mga06r32_2827_c1
475 nmdc:mga06r32_39166_c1
476 nmdc:mga06r32_5390_c1
477 nmdc:mga08y16_48589_c1
478 nmdc:mga0n895_1014_c1
479 nmdc:mga08x19_4300_c1
480 nmdc:mga0a205_19643_c1
481 nmdc:mga0a205_4240_c1
482 Ga0495619_0000010
483 Ga0495619_0000376
484 Ga0500658_0010593
485 Ga0500604_0000887
486 Ga0500622_0000075
487 Ga0500622_0000086
488 Ga0501084_0075653
489 Ga0501082_0006499
490 2688069170
491 2738725280
492 2819574981
493 2889420844
494 2910245795
495 2920112026

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00476

DNA_pol_A

DNA polymerase family A

612

988

0.98

PF01367

5_3_exonuc

5'-3' exonuclease, C-terminal SAM fold

186

282

0.98

PF22619

DNA_polI_exo1

DNA polymerase I, ribonuclease H-like domain

453

556

0.92

PF01612

DNA_pol_A_exo1

3'-5' exonuclease

445

580

0.91

PF02739

5_3_exonuc_N

5'-3' exonuclease, N-terminal resolvase-like domain

11

184

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1kfd-assembly1.cif.gz_A crystal structures of the klenow fragment of dna polymerase i complexed with deoxynucleoside triphosphate and pyrophosphate 0.9309 339 935
6vdd-assembly2.cif.gz_D pol domain of pol1 from m. smegmatis complex with dna primer-template and dntp 0.926 341 934
4dsf-assembly1.cif.gz_A ternary complex of bacillus dna polymerase i large fragment f710y, dna duplex, and rctp (paired with dg of template) in presence of mn2+ 0.9255 354 935
3px4-assembly1.cif.gz_A crystal structure of bacillus dna polymerase i large fragment bound to dna and ddctp-da mismatch (wobble) in ajar conformation 0.9247 354 935
4ds4-assembly2.cif.gz_D ternary complex of bacillus dna polymerase i large fragment, dna duplex, and rctp in presence of mn2+ 0.9245 354 935
ID Description Score Start End Superfamily
4ds5D04 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9881 714 856 1.10.150.20
4ds5D04 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9725 714 856 1.10.150.20
4c8nA04 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9646 714 856 1.10.150.20
1tauA06 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9587 714 856 1.10.150.20
3rr7A04 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9554 714 856 1.10.150.20
ID Description Score Start End GO Terms
AF-A0A519RVX9-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9974 819 935 GO:0003677
GO:0003887
GO:0006261
GO:0006302
AF-X1F2P7-F1-model_v4 DNA-directed DNA polymerase family A palm domain-containing protein 0.995 796 922 GO:0003677
GO:0003887
GO:0006261
GO:0006302
AF-A0A2N1VET7-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9949 811 935 GO:0003677
GO:0003887
GO:0006261
GO:0006302
AF-A0A3D6D0L5-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9915 805 935 GO:0003677
GO:0003887
GO:0006261
GO:0006302
AF-A0A7V4BKS5-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9914 718 935 GO:0003677
GO:0003887
GO:0006261
GO:0006302

Map