F359059
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 247 | 156 | 494 | 459 |
Family's Representative Sequence
| Representative Sequence | 3300025914|Ga0207671_10002891|Ga0207671_1000289113 |
| Length | 535 |
| Sequence | VIVEPHPDTSLSDDVCVAGDLTFLQQGGMRRDIYLPKKVRIFLPIHGRRRSFIFMGSHGQANILKFRWYGYCGLDSTKIPAMTKYDAIIIGSGQAGNPLAKKLANAGWKVVVIERKWVGGTCINVGCTPTKTMIASGRIAYLVNRSKDFGVNTTGRSVDMQEVVRRKNAIVLSYRESTMKGLLQPANIKIEFGNAVFTGEKEVTVTKEDGSQSALTASHIFINTGASPAIPPIPGLESSGYFTSDTIMDVMEVPRHLVIIGGSYIALEFGQLYRRLGSEVTVIESGGHFLPKEDEDIATALKKILEDDGIKIRTNAKVTEVSGGPGEVTVKFGAEAITGSHLLVATGRSANTAALNLTSSGVELDEHGFIRTNDKLETNVPGVYALGDVKGGPQFTHISYNDHLIVYKNLIEKGNESIDSRQSIYCLFTDPELGRVGLTEKQAREKGLHIKVATMPADWIARAYENSETRGLLKVVVDADNKKIIGASILCEGGGELMSILQMAMMGDVTYDRIRDAVFAHPTFAESLNNLFASL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 4 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 5 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 6 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 7 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 8 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 9 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 10 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 11 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 12 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 13 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 14 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 15 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 16 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 17 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 18 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 19 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 20 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 28 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 29 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 30 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 32 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 33 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 34 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 35 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 36 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 37 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 38 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 52 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 54 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 57 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 58 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 60 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 61 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 63 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 65 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 85 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 86 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 87 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 88 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 89 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 90 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 91 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 92 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 93 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 94 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 95 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 96 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 97 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 98 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 99 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 100 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 101 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 102 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 103 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 104 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 105 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 106 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 117 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 118 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 120 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 121 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 122 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 123 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 124 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 125 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 126 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 127 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 128 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 129 | 2522125168 | Dyadobacter beijingensis DSM 21582 | Isolate | Rhizosphere |
| 130 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 131 | 2738541283 | Pedobacter sp. OK701 | Isolate | Unclassified |
| 132 | 2738541302 | Pedobacter sp. CF074 | Isolate | Unclassified |
| 133 | 2739367656 | Pedobacter sp. CF523 | Isolate | Unclassified |
| 134 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 135 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 136 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 137 | 2821136567 | Chitinophaga sancti 1232 | Isolate | Unclassified |
| 138 | 2840677318 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 139 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 140 | 2842909656 | Pedobacter sp. R-72393 | Isolate | Unclassified |
| 141 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 142 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 143 | 2852627209 | Pedobacter sp. AK017 | Isolate | Rhizosphere |
| 144 | 2857627736 | Pedobacter sp. R-74587 | Isolate | Unclassified |
| 145 | 2868088558 | Phytoactinopolyspora endophytica EGI 60009 | Isolate | Unclassified |
| 146 | 2883068021 | Chitinophaga rhizosphaerae T16R-86 | Isolate | Rhizosphere |
| 147 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 148 | 2896085136 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 149 | 2904445276 | Pedobacter terrae 1734 | Isolate | Rhizosphere |
| 150 | 2904467357 | Chitinophaga sancti 3198 | Isolate | Unclassified |
| 151 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 152 | 2929239360 | Chitinophaga sp. R-73072 Hybrid assembly | Isolate | Unclassified |
| 153 | 2929921140 | Chitinophaga sp. R-72609 Hybrid assembly | Isolate | Unclassified |
| 154 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 155 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 156 | 8003151029 | Chitinophaga sp. GbtcB8 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.26 |
| Metatranscriptomes | 0.4 |
| Isolates | 11.34 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 16.19 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 66.4 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.02 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207671_10002891 | 3300025914 | Bacteria | 17784 |
| 2 | JGI24740J21852_10006839 | 3300001979 | Bacteria | 4682 |
| 3 | JGI24739J22299_10002126 | 3300001989 | Bacteria | 7589 |
| 4 | JGI25154J39366_1000042 | 3300002738 | Bacteria | 143170 |
| 5 | JGI25406J46586_10012318 | 3300003203 | Bacteria | 3716 |
| 6 | JGI25153J46596_10004285 | 3300003215 | Bacteria | 7712 |
| 7 | rootH1_10105567 | 3300003316 | Bacteria | 3467 |
| 8 | rootH2_10035991 | 3300003320 | Bacteria | 16404 |
| 9 | rootH2_10084084 | 3300003320 | Unclassified | 3905 |
| 10 | rootH2_10147807 | 3300003320 | Bacteria | 5601 |
| 11 | rootH2_10163281 | 3300003320 | Bacteria | 2353 |
| 12 | rootH2_10195099 | 3300003320 | Unclassified | 4045 |
| 13 | rootH2_10198036 | 3300003320 | Bacteria | 4066 |
| 14 | rootL2_10002976 | 3300003322 | Bacteria | 4181 |
| 15 | rootL2_10033216 | 3300003322 | Bacteria | 6415 |
| 16 | rootL2_10115726 | 3300003322 | Bacteria | 6731 |
| 17 | rootH1_10081784 | 3300003323 | Bacteria | 6224 |
| 18 | rootH1_10313422 | 3300003323 | Bacteria | 2537 |
| 19 | JGI25160J50197_1007739 | 3300003354 | Bacteria | 4171 |
| 20 | JGI25160J50197_1008808 | 3300003354 | Bacteria | 3807 |
| 21 | Ga0055535_1004663 | 3300003761 | Bacteria | 3251 |
| 22 | Ga0055526_1011295 | 3300003771 | Bacteria | 4042 |
| 23 | Ga0055536_1000003 | 3300003781 | Bacteria | 447744 |
| 24 | Ga0055528_1000317 | 3300003790 | Bacteria | 40640 |
| 25 | Ga0055530_10001025 | 3300003791 | Bacteria | 22234 |
| 26 | Ga0055530_10001134 | 3300003791 | Bacteria | 20745 |
| 27 | Ga0055531_10000036 | 3300003794 | Bacteria | 147042 |
| 28 | Ga0065165_1000440 | 3300005262 | Bacteria | 65343 |
| 29 | Ga0065714_10064487 | 3300005288 | Bacteria | 50955 |
| 30 | Ga0070658_10082350 | 3300005327 | Bacteria | 2644 |
| 31 | Ga0070658_10174951 | 3300005327 | Bacteria | 1805 |
| 32 | Ga0070683_100001205 | 3300005329 | Bacteria | 19694 |
| 33 | Ga0070670_100159516 | 3300005331 | Bacteria | 1954 |
| 34 | Ga0070667_100278242 | 3300005367 | Bacteria | 1502 |
| 35 | Ga0070706_100002987 | 3300005467 | Bacteria | 16762 |
| 36 | Ga0070698_100027158 | 3300005471 | Bacteria | 5954 |
| 37 | Ga0070679_100001426 | 3300005530 | Bacteria | 21128 |
| 38 | Ga0070684_100231015 | 3300005535 | Bacteria | 1689 |
| 39 | Ga0070697_100121971 | 3300005536 | Bacteria | 2181 |
| 40 | Ga0068853_100003392 | 3300005539 | Bacteria | 12198 |
| 41 | Ga0068853_100036066 | 3300005539 | Bacteria | 4203 |
| 42 | Ga0068853_100068931 | 3300005539 | Bacteria | 3076 |
| 43 | Ga0070665_100000018 | 3300005548 | Bacteria | 434118 |
| 44 | Ga0068855_100000121 | 3300005563 | Bacteria | 98009 |
| 45 | Ga0068855_100001866 | 3300005563 | Bacteria | 26188 |
| 46 | Ga0068855_100016441 | 3300005563 | Bacteria | 8895 |
| 47 | Ga0068855_100156204 | 3300005563 | Bacteria | 2591 |
| 48 | Ga0068855_100219205 | 3300005563 | Bacteria | 2134 |
| 49 | Ga0068857_100002546 | 3300005577 | Bacteria | 14929 |
| 50 | Ga0068857_100095945 | 3300005577 | Bacteria | 2657 |
| 51 | Ga0068854_100086672 | 3300005578 | Bacteria | 2322 |
| 52 | Ga0068852_100000274 | 3300005616 | Bacteria | 34259 |
| 53 | Ga0068852_100039840 | 3300005616 | Bacteria | 3959 |
| 54 | Ga0068852_100055680 | 3300005616 | Bacteria | 3414 |
| 55 | Ga0068852_100152006 | 3300005616 | Bacteria | 2154 |
| 56 | Ga0068860_100000040 | 3300005843 | Bacteria | 231652 |
| 57 | Ga0068860_100002579 | 3300005843 | Bacteria | 18964 |
| 58 | Ga0081540_1024781 | 3300005983 | Bacteria | 3472 |
| 59 | Ga0081539_10000693 | 3300005985 | Bacteria | 67531 |
| 60 | Ga0105240_10000785 | 3300009093 | Bacteria | 57570 |
| 61 | Ga0105240_10003502 | 3300009093 | Bacteria | 24345 |
| 62 | Ga0105240_10005325 | 3300009093 | Bacteria | 19195 |
| 63 | Ga0105240_10009847 | 3300009093 | Bacteria | 13490 |
| 64 | Ga0105240_10013822 | 3300009093 | Bacteria | 11059 |
| 65 | Ga0105240_10051274 | 3300009093 | Bacteria | 5195 |
| 66 | Ga0105241_10000297 | 3300009174 | Bacteria | 37174 |
| 67 | Ga0105237_10003067 | 3300009545 | Bacteria | 20140 |
| 68 | Ga0105237_10005937 | 3300009545 | Bacteria | 13692 |
| 69 | Ga0105237_10013777 | 3300009545 | Bacteria | 8468 |
| 70 | Ga0105237_10018557 | 3300009545 | Bacteria | 7197 |
| 71 | Ga0105237_10139285 | 3300009545 | Bacteria | 2421 |
| 72 | Ga0105238_10001633 | 3300009551 | Bacteria | 22466 |
| 73 | Ga0105238_10102041 | 3300009551 | Bacteria | 2851 |
| 74 | Ga0105239_10000383 | 3300010375 | Bacteria | 64504 |
| 75 | Ga0105239_10000998 | 3300010375 | Bacteria | 39651 |
| 76 | Ga0105239_10005258 | 3300010375 | Bacteria | 15228 |
| 77 | Ga0157373_10000034 | 3300013100 | Bacteria | 124053 |
| 78 | Ga0157373_10016353 | 3300013100 | Bacteria | 5413 |
| 79 | Ga0157373_10040819 | 3300013100 | Unclassified | 3320 |
| 80 | Ga0157373_10070293 | 3300013100 | Bacteria | 2474 |
| 81 | Ga0157371_10068346 | 3300013102 | Unclassified | 2515 |
| 82 | Ga0157370_10000132 | 3300013104 | Bacteria | 89678 |
| 83 | Ga0157370_10001901 | 3300013104 | Bacteria | 25708 |
| 84 | Ga0157370_10039187 | 3300013104 | Bacteria | 4579 |
| 85 | Ga0157370_10115587 | 3300013104 | Bacteria | 2506 |
| 86 | Ga0157370_10126770 | 3300013104 | Bacteria | 2382 |
| 87 | Ga0157369_10000006 | 3300013105 | Bacteria | 412230 |
| 88 | Ga0157369_10001882 | 3300013105 | Bacteria | 25309 |
| 89 | Ga0157374_10000025 | 3300013296 | Bacteria | 245131 |
| 90 | Ga0157374_10072380 | 3300013296 | Bacteria | 3252 |
| 91 | Ga0163162_10000323 | 3300013306 | Bacteria | 43956 |
| 92 | Ga0163162_10003073 | 3300013306 | Bacteria | 15950 |
| 93 | Ga0157372_10000080 | 3300013307 | Bacteria | 100216 |
| 94 | Ga0157372_10011417 | 3300013307 | Bacteria | 9447 |
| 95 | Ga0157372_10029795 | 3300013307 | Bacteria | 5964 |
| 96 | Ga0157372_10329696 | 3300013307 | Bacteria | 1777 |
| 97 | Ga0157372_10348873 | 3300013307 | Bacteria | 1724 |
| 98 | Ga0163163_10021988 | 3300014325 | Bacteria | 6030 |
| 99 | Ga0163163_10236820 | 3300014325 | Bacteria | 1875 |
| 100 | Ga0182008_10004306 | 3300014497 | Bacteria | 8331 |
| 101 | Ga0157376_10001038 | 3300014969 | Bacteria | 18213 |
| 102 | Ga0182006_1000115 | 3300015261 | Bacteria | 86290 |
| 103 | Ga0182006_1000238 | 3300015261 | Bacteria | 51972 |
| 104 | Ga0182006_1000521 | 3300015261 | Bacteria | 29292 |
| 105 | Ga0182006_1001572 | 3300015261 | Bacteria | 13620 |
| 106 | Ga0182005_1000053 | 3300015265 | Bacteria | 113111 |
| 107 | Ga0163161_10000089 | 3300017792 | Bacteria | 91093 |
| 108 | Ga0163161_10000124 | 3300017792 | Bacteria | 72378 |
| 109 | Ga0163161_10000705 | 3300017792 | Bacteria | 26566 |
| 110 | Ga0206356_10909769 | 3300020070 | Bacteria | 1991 |
| 111 | Ga0213876_10004353 | 3300021384 | Bacteria | 7930 |
| 112 | Ga0209258_100036 | 3300025242 | Bacteria | 428859 |
| 113 | Ga0209646_1000017 | 3300025246 | Bacteria | 488265 |
| 114 | Ga0209026_1000196 | 3300025250 | Bacteria | 84284 |
| 115 | Ga0209026_1000199 | 3300025250 | Bacteria | 83231 |
| 116 | Ga0209148_1000246 | 3300025254 | Bacteria | 86586 |
| 117 | Ga0209673_1001174 | 3300025273 | Bacteria | 28377 |
| 118 | Ga0209676_1000001 | 3300025292 | Bacteria | 1852142 |
| 119 | Ga0209564_1003728 | 3300025295 | Bacteria | 9973 |
| 120 | Ga0209564_1011148 | 3300025295 | Bacteria | 4057 |
| 121 | Ga0209758_1009279 | 3300025297 | Bacteria | 6150 |
| 122 | Ga0209758_1009497 | 3300025297 | Bacteria | 6029 |
| 123 | Ga0209758_1011365 | 3300025297 | Bacteria | 5169 |
| 124 | Ga0209050_1000016 | 3300025298 | Bacteria | 729149 |
| 125 | Ga0209050_1001005 | 3300025298 | Bacteria | 35385 |
| 126 | Ga0209050_1002705 | 3300025298 | Bacteria | 14408 |
| 127 | Ga0207426_1000009 | 3300025302 | Bacteria | 797229 |
| 128 | Ga0207426_1000840 | 3300025302 | Bacteria | 32431 |
| 129 | Ga0207426_1001701 | 3300025302 | Bacteria | 16936 |
| 130 | Ga0209051_1017081 | 3300025303 | Bacteria | 3255 |
| 131 | Ga0209257_1000008 | 3300025304 | Bacteria | 1294570 |
| 132 | Ga0209257_1002424 | 3300025304 | Bacteria | 18610 |
| 133 | Ga0209257_1015136 | 3300025304 | Bacteria | 3242 |
| 134 | Ga0207647_10006290 | 3300025904 | Bacteria | 8645 |
| 135 | Ga0207705_10014975 | 3300025909 | Bacteria | 5574 |
| 136 | Ga0207705_10122912 | 3300025909 | Bacteria | 1928 |
| 137 | Ga0207684_10005219 | 3300025910 | Bacteria | 12071 |
| 138 | Ga0207695_10000146 | 3300025913 | Bacteria | 209416 |
| 139 | Ga0207695_10000248 | 3300025913 | Bacteria | 140288 |
| 140 | Ga0207695_10000260 | 3300025913 | Bacteria | 133317 |
| 141 | Ga0207695_10003406 | 3300025913 | Bacteria | 22456 |
| 142 | Ga0207695_10012258 | 3300025913 | Bacteria | 10298 |
| 143 | Ga0207695_10079911 | 3300025913 | Bacteria | 3313 |
| 144 | Ga0207695_10206770 | 3300025913 | Unclassified | 1875 |
| 145 | Ga0207671_10008610 | 3300025914 | Bacteria | 8622 |
| 146 | Ga0207660_10179445 | 3300025917 | Bacteria | 1644 |
| 147 | Ga0207652_10094403 | 3300025921 | Bacteria | 2634 |
| 148 | Ga0207661_10002957 | 3300025944 | Bacteria | 11755 |
| 149 | Ga0207667_10000030 | 3300025949 | Bacteria | 327226 |
| 150 | Ga0207667_10000270 | 3300025949 | Bacteria | 71998 |
| 151 | Ga0207667_10001158 | 3300025949 | Bacteria | 33133 |
| 152 | Ga0207667_10011576 | 3300025949 | Bacteria | 10243 |
| 153 | Ga0207640_10055212 | 3300025981 | Bacteria | 2601 |
| 154 | Ga0207639_10003287 | 3300026041 | Bacteria | 10877 |
| 155 | Ga0207674_10002283 | 3300026116 | Bacteria | 24310 |
| 156 | Ga0207698_10000963 | 3300026142 | Bacteria | 16738 |
| 157 | Ga0207698_10025283 | 3300026142 | Bacteria | 4180 |
| 158 | Ga0207698_10084716 | 3300026142 | Bacteria | 2571 |
| 159 | Ga0268266_10000026 | 3300028379 | Bacteria | 434485 |
| 160 | Ga0268264_10000019 | 3300028381 | Bacteria | 488112 |
| 161 | Ga0268264_10051950 | 3300028381 | Bacteria | 3417 |
| 162 | Ga0307517_10004138 | 3300028786 | Bacteria | 22383 |
| 163 | Ga0307515_10120218 | 3300028794 | Bacteria | 2982 |
| 164 | Ga0265338_10122033 | 3300028800 | Bacteria | 2075 |
| 165 | Ga0307511_10000182 | 3300030521 | Bacteria | 62310 |
| 166 | Ga0307513_10023740 | 3300031456 | Bacteria | 7157 |
| 167 | Ga0307513_10177783 | 3300031456 | Bacteria | 1996 |
| 168 | Ga0316576_10016550 | 3300031727 | Bacteria | 4984 |
| 169 | Ga0316578_10000895 | 3300031728 | Bacteria | 11246 |
| 170 | Ga0307405_10000018 | 3300031731 | Bacteria | 182495 |
| 171 | Ga0316577_10003320 | 3300031733 | Bacteria | 8105 |
| 172 | Ga0307407_10000015 | 3300031903 | Bacteria | 143258 |
| 173 | Ga0307416_100000025 | 3300032002 | Bacteria | 178154 |
| 174 | Ga0307414_10090835 | 3300032004 | Bacteria | 2268 |
| 175 | Ga0307510_10011678 | 3300033180 | Bacteria | 10429 |
| 176 | Ga0316574_0024093 | 3300035398 | Bacteria | 3639 |
| 177 | Ga0395899_0000011 | 3300037312 | Bacteria | 521331 |
| 178 | Ga0395899_0002786 | 3300037312 | Bacteria | 14085 |
| 179 | Ga0436363_1550192 | 3300039450 | Bacteria | 12215 |
| 180 | Ga0436362_0972284 | 3300039453 | Bacteria | 11217 |
| 181 | Ga0466972_0000411 | 3300044658 | Bacteria | 22422 |
| 182 | Ga0466965_0058391 | 3300044683 | Bacteria | 1924 |
| 183 | Ga0466966_0083546 | 3300044684 | Bacteria | 1986 |
| 184 | Ga0466966_0084556 | 3300044684 | Bacteria | 1973 |
| 185 | Ga0466964_0047339 | 3300044706 | Bacteria | 1755 |
| 186 | Ga0466970_0049170 | 3300044765 | Bacteria | 2249 |
| 187 | Ga0495638_0000121 | 3300046460 | Bacteria | 126440 |
| 188 | Ga0495638_0028638 | 3300046460 | Bacteria | 3594 |
| 189 | Ga0495638_0043502 | 3300046460 | Bacteria | 2833 |
| 190 | Ga0495606_0002360 | 3300046507 | Bacteria | 22172 |
| 191 | Ga0495606_0004223 | 3300046507 | Bacteria | 14543 |
| 192 | Ga0495606_0007306 | 3300046507 | Bacteria | 9946 |
| 193 | Ga0495606_0014275 | 3300046507 | Bacteria | 6211 |
| 194 | Ga0495610_0000047 | 3300046512 | Bacteria | 151516 |
| 195 | Ga0495648_0003503 | 3300046524 | Bacteria | 13761 |
| 196 | Ga0495611_0000072 | 3300046648 | Bacteria | 70916 |
| 197 | Ga0495625_0110999 | 3300046660 | Bacteria | 1874 |
| 198 | Ga0495661_0002548 | 3300046665 | Bacteria | 13977 |
| 199 | Ga0495661_0016760 | 3300046665 | Bacteria | 4847 |
| 200 | Ga0495660_0012794 | 3300046810 | Bacteria | 4868 |
| 201 | Ga0495687_000031 | 3300047443 | Bacteria | 274659 |
| 202 | Ga0495687_000739 | 3300047443 | Bacteria | 35614 |
| 203 | Ga0495686_0000005 | 3300047472 | Bacteria | 827143 |
| 204 | Ga0495686_0000040 | 3300047472 | Bacteria | 301210 |
| 205 | Ga0495686_0006331 | 3300047472 | Bacteria | 9084 |
| 206 | Ga0496122_0004861 | 3300048925 | Bacteria | 16344 |
| 207 | Ga0496123_0046035 | 3300048926 | Bacteria | 2963 |
| 208 | Ga0501043_0202188 | 3300049579 | Bacteria | 1542 |
| 209 | Ga0501241_000229 | 3300049758 | Bacteria | 12523 |
| 210 | Ga0500644_0002027 | 3300053088 | Bacteria | 5152 |
| 211 | Ga0500646_0026415 | 3300053090 | Bacteria | 1574 |
| 212 | Ga0500583_0009065 | 3300053092 | Bacteria | 3614 |
| 213 | Ga0500569_007676 | 3300053109 | Bacteria | 2432 |
| 214 | Ga0500658_0020339 | 3300053134 | Bacteria | 2505 |
| 215 | Ga0500559_0021958 | 3300053136 | Bacteria | 2707 |
| 216 | Ga0500616_0000004 | 3300053153 | Bacteria | 1002714 |
| 217 | Ga0500622_0000849 | 3300053156 | Bacteria | 26107 |
| 218 | Ga0500622_0044598 | 3300053156 | Bacteria | 2298 |
| 219 | Ga0500661_002400 | 3300055283 | Bacteria | 3538 |
| 220 | 2522550938 | 2522125168 | Bacteria | 7376607 |
| 221 | 2586208346 | 2585427687 | Bacteria | 5544917 |
| 222 | 2738757721 | 2738541283 | Bacteria | 7222293 |
| 223 | 2738853988 | 2738541302 | Bacteria | 5944758 |
| 224 | 2739615676 | 2739367656 | Bacteria | 5152243 |
| 225 | 2739647785 | 2739367663 | Bacteria | 5040914 |
| 226 | 2819548246 | 2818991437 | Bacteria | 5805520 |
| 227 | 2819575784 | 2818991442 | Bacteria | 8318214 |
| 228 | 2821138336 | 2821136567 | Bacteria | 8080116 |
| 229 | 2840678358 | 2840677318 | Bacteria | 2664183 |
| 230 | 2842723507 | 2842722452 | Bacteria | 6263924 |
| 231 | 2842910016 | 2842909656 | Bacteria | 6185908 |
| 232 | 2849284849 | 2849281842 | Bacteria | 6065644 |
| 233 | 2852626257 | 2852623160 | Bacteria | 4376875 |
| 234 | 2852628981 | 2852627209 | Bacteria | 5896285 |
| 235 | 2857632223 | 2857627736 | Bacteria | 5625397 |
| 236 | 2868091678 | 2868088558 | Bacteria | 7609351 |
| 237 | 2883069183 | 2883068021 | Bacteria | 6192739 |
| 238 | 2884934708 | 2884933994 | Bacteria | 4535041 |
| 239 | 2896086175 | 2896085136 | Bacteria | 6129793 |
| 240 | 2904445921 | 2904445276 | Bacteria | 5310396 |
| 241 | 2904469134 | 2904467357 | Bacteria | 8057758 |
| 242 | 2919441628 | 2919437846 | Bacteria | 6199444 |
| 243 | 2929244091 | 2929239360 | Bacteria | 7745570 |
| 244 | 2929925443 | 2929921140 | Bacteria | 8649150 |
| 245 | 2946000349 | 2945997725 | Bacteria | 6404843 |
| 246 | 2954017236 | 2954016120 | Bacteria | 6446024 |
| 247 | 8003155440 | 8003151029 | Bacteria | 8187759 |
| 248 | Ga0207671_10002891 | |||
| 249 | JGI24740J21852_10006839 | |||
| 250 | JGI24739J22299_10002126 | |||
| 251 | JGI25154J39366_1000042 | |||
| 252 | JGI25406J46586_10012318 | |||
| 253 | JGI25153J46596_10004285 | |||
| 254 | rootH1_10105567 | |||
| 255 | rootH2_10035991 | |||
| 256 | rootH2_10084084 | |||
| 257 | rootH2_10147807 | |||
| 258 | rootH2_10163281 | |||
| 259 | rootH2_10195099 | |||
| 260 | rootH2_10198036 | |||
| 261 | rootL2_10002976 | |||
| 262 | rootL2_10033216 | |||
| 263 | rootL2_10115726 | |||
| 264 | rootH1_10081784 | |||
| 265 | rootH1_10313422 | |||
| 266 | JGI25160J50197_1007739 | |||
| 267 | JGI25160J50197_1008808 | |||
| 268 | Ga0055535_1004663 | |||
| 269 | Ga0055526_1011295 | |||
| 270 | Ga0055536_1000003 | |||
| 271 | Ga0055528_1000317 | |||
| 272 | Ga0055530_10001025 | |||
| 273 | Ga0055530_10001134 | |||
| 274 | Ga0055531_10000036 | |||
| 275 | Ga0065165_1000440 | |||
| 276 | Ga0065714_10064487 | |||
| 277 | Ga0070658_10082350 | |||
| 278 | Ga0070658_10174951 | |||
| 279 | Ga0070683_100001205 | |||
| 280 | Ga0070670_100159516 | |||
| 281 | Ga0070667_100278242 | |||
| 282 | Ga0070706_100002987 | |||
| 283 | Ga0070698_100027158 | |||
| 284 | Ga0070679_100001426 | |||
| 285 | Ga0070684_100231015 | |||
| 286 | Ga0070697_100121971 | |||
| 287 | Ga0068853_100003392 | |||
| 288 | Ga0068853_100036066 | |||
| 289 | Ga0068853_100068931 | |||
| 290 | Ga0070665_100000018 | |||
| 291 | Ga0068855_100000121 | |||
| 292 | Ga0068855_100001866 | |||
| 293 | Ga0068855_100016441 | |||
| 294 | Ga0068855_100156204 | |||
| 295 | Ga0068855_100219205 | |||
| 296 | Ga0068857_100002546 | |||
| 297 | Ga0068857_100095945 | |||
| 298 | Ga0068854_100086672 | |||
| 299 | Ga0068852_100000274 | |||
| 300 | Ga0068852_100039840 | |||
| 301 | Ga0068852_100055680 | |||
| 302 | Ga0068852_100152006 | |||
| 303 | Ga0068860_100000040 | |||
| 304 | Ga0068860_100002579 | |||
| 305 | Ga0081540_1024781 | |||
| 306 | Ga0081539_10000693 | |||
| 307 | Ga0105240_10000785 | |||
| 308 | Ga0105240_10003502 | |||
| 309 | Ga0105240_10005325 | |||
| 310 | Ga0105240_10009847 | |||
| 311 | Ga0105240_10013822 | |||
| 312 | Ga0105240_10051274 | |||
| 313 | Ga0105241_10000297 | |||
| 314 | Ga0105237_10003067 | |||
| 315 | Ga0105237_10005937 | |||
| 316 | Ga0105237_10013777 | |||
| 317 | Ga0105237_10018557 | |||
| 318 | Ga0105237_10139285 | |||
| 319 | Ga0105238_10001633 | |||
| 320 | Ga0105238_10102041 | |||
| 321 | Ga0105239_10000383 | |||
| 322 | Ga0105239_10000998 | |||
| 323 | Ga0105239_10005258 | |||
| 324 | Ga0157373_10000034 | |||
| 325 | Ga0157373_10016353 | |||
| 326 | Ga0157373_10040819 | |||
| 327 | Ga0157373_10070293 | |||
| 328 | Ga0157371_10068346 | |||
| 329 | Ga0157370_10000132 | |||
| 330 | Ga0157370_10001901 | |||
| 331 | Ga0157370_10039187 | |||
| 332 | Ga0157370_10115587 | |||
| 333 | Ga0157370_10126770 | |||
| 334 | Ga0157369_10000006 | |||
| 335 | Ga0157369_10001882 | |||
| 336 | Ga0157374_10000025 | |||
| 337 | Ga0157374_10072380 | |||
| 338 | Ga0163162_10000323 | |||
| 339 | Ga0163162_10003073 | |||
| 340 | Ga0157372_10000080 | |||
| 341 | Ga0157372_10011417 | |||
| 342 | Ga0157372_10029795 | |||
| 343 | Ga0157372_10329696 | |||
| 344 | Ga0157372_10348873 | |||
| 345 | Ga0163163_10021988 | |||
| 346 | Ga0163163_10236820 | |||
| 347 | Ga0182008_10004306 | |||
| 348 | Ga0157376_10001038 | |||
| 349 | Ga0182006_1000115 | |||
| 350 | Ga0182006_1000238 | |||
| 351 | Ga0182006_1000521 | |||
| 352 | Ga0182006_1001572 | |||
| 353 | Ga0182005_1000053 | |||
| 354 | Ga0163161_10000089 | |||
| 355 | Ga0163161_10000124 | |||
| 356 | Ga0163161_10000705 | |||
| 357 | Ga0206356_10909769 | |||
| 358 | Ga0213876_10004353 | |||
| 359 | Ga0209258_100036 | |||
| 360 | Ga0209646_1000017 | |||
| 361 | Ga0209026_1000196 | |||
| 362 | Ga0209026_1000199 | |||
| 363 | Ga0209148_1000246 | |||
| 364 | Ga0209673_1001174 | |||
| 365 | Ga0209676_1000001 | |||
| 366 | Ga0209564_1003728 | |||
| 367 | Ga0209564_1011148 | |||
| 368 | Ga0209758_1009279 | |||
| 369 | Ga0209758_1009497 | |||
| 370 | Ga0209758_1011365 | |||
| 371 | Ga0209050_1000016 | |||
| 372 | Ga0209050_1001005 | |||
| 373 | Ga0209050_1002705 | |||
| 374 | Ga0207426_1000009 | |||
| 375 | Ga0207426_1000840 | |||
| 376 | Ga0207426_1001701 | |||
| 377 | Ga0209051_1017081 | |||
| 378 | Ga0209257_1000008 | |||
| 379 | Ga0209257_1002424 | |||
| 380 | Ga0209257_1015136 | |||
| 381 | Ga0207647_10006290 | |||
| 382 | Ga0207705_10014975 | |||
| 383 | Ga0207705_10122912 | |||
| 384 | Ga0207684_10005219 | |||
| 385 | Ga0207695_10000146 | |||
| 386 | Ga0207695_10000248 | |||
| 387 | Ga0207695_10000260 | |||
| 388 | Ga0207695_10003406 | |||
| 389 | Ga0207695_10012258 | |||
| 390 | Ga0207695_10079911 | |||
| 391 | Ga0207695_10206770 | |||
| 392 | Ga0207671_10008610 | |||
| 393 | Ga0207660_10179445 | |||
| 394 | Ga0207652_10094403 | |||
| 395 | Ga0207661_10002957 | |||
| 396 | Ga0207667_10000030 | |||
| 397 | Ga0207667_10000270 | |||
| 398 | Ga0207667_10001158 | |||
| 399 | Ga0207667_10011576 | |||
| 400 | Ga0207640_10055212 | |||
| 401 | Ga0207639_10003287 | |||
| 402 | Ga0207674_10002283 | |||
| 403 | Ga0207698_10000963 | |||
| 404 | Ga0207698_10025283 | |||
| 405 | Ga0207698_10084716 | |||
| 406 | Ga0268266_10000026 | |||
| 407 | Ga0268264_10000019 | |||
| 408 | Ga0268264_10051950 | |||
| 409 | Ga0307517_10004138 | |||
| 410 | Ga0307515_10120218 | |||
| 411 | Ga0265338_10122033 | |||
| 412 | Ga0307511_10000182 | |||
| 413 | Ga0307513_10023740 | |||
| 414 | Ga0307513_10177783 | |||
| 415 | Ga0316576_10016550 | |||
| 416 | Ga0316578_10000895 | |||
| 417 | Ga0307405_10000018 | |||
| 418 | Ga0316577_10003320 | |||
| 419 | Ga0307407_10000015 | |||
| 420 | Ga0307416_100000025 | |||
| 421 | Ga0307414_10090835 | |||
| 422 | Ga0307510_10011678 | |||
| 423 | Ga0316574_0024093 | |||
| 424 | Ga0395899_0000011 | |||
| 425 | Ga0395899_0002786 | |||
| 426 | Ga0436363_1550192 | |||
| 427 | Ga0436362_0972284 | |||
| 428 | Ga0466972_0000411 | |||
| 429 | Ga0466965_0058391 | |||
| 430 | Ga0466966_0083546 | |||
| 431 | Ga0466966_0084556 | |||
| 432 | Ga0466964_0047339 | |||
| 433 | Ga0466970_0049170 | |||
| 434 | Ga0495638_0000121 | |||
| 435 | Ga0495638_0028638 | |||
| 436 | Ga0495638_0043502 | |||
| 437 | Ga0495606_0002360 | |||
| 438 | Ga0495606_0004223 | |||
| 439 | Ga0495606_0007306 | |||
| 440 | Ga0495606_0014275 | |||
| 441 | Ga0495610_0000047 | |||
| 442 | Ga0495648_0003503 | |||
| 443 | Ga0495611_0000072 | |||
| 444 | Ga0495625_0110999 | |||
| 445 | Ga0495661_0002548 | |||
| 446 | Ga0495661_0016760 | |||
| 447 | Ga0495660_0012794 | |||
| 448 | Ga0495687_000031 | |||
| 449 | Ga0495687_000739 | |||
| 450 | Ga0495686_0000005 | |||
| 451 | Ga0495686_0000040 | |||
| 452 | Ga0495686_0006331 | |||
| 453 | Ga0496122_0004861 | |||
| 454 | Ga0496123_0046035 | |||
| 455 | Ga0501043_0202188 | |||
| 456 | Ga0501241_000229 | |||
| 457 | Ga0500644_0002027 | |||
| 458 | Ga0500646_0026415 | |||
| 459 | Ga0500583_0009065 | |||
| 460 | Ga0500569_007676 | |||
| 461 | Ga0500658_0020339 | |||
| 462 | Ga0500559_0021958 | |||
| 463 | Ga0500616_0000004 | |||
| 464 | Ga0500622_0000849 | |||
| 465 | Ga0500622_0044598 | |||
| 466 | Ga0500661_002400 | |||
| 467 | 2522550938 | |||
| 468 | 2586208346 | |||
| 469 | 2738757721 | |||
| 470 | 2738853988 | |||
| 471 | 2739615676 | |||
| 472 | 2739647785 | |||
| 473 | 2819548246 | |||
| 474 | 2819575784 | |||
| 475 | 2821138336 | |||
| 476 | 2840678358 | |||
| 477 | 2842723507 | |||
| 478 | 2842910016 | |||
| 479 | 2849284849 | |||
| 480 | 2852626257 | |||
| 481 | 2852628981 | |||
| 482 | 2857632223 | |||
| 483 | 2868091678 | |||
| 484 | 2883069183 | |||
| 485 | 2884934708 | |||
| 486 | 2896086175 | |||
| 487 | 2904445921 | |||
| 488 | 2904469134 | |||
| 489 | 2919441628 | |||
| 490 | 2929244091 | |||
| 491 | 2929925443 | |||
| 492 | 2946000349 | |||
| 493 | 2954017236 | |||
| 494 | 8003155440 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
PF02852
Pyr_redox_dim
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
423
532
0.97
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5x1y-assembly3.cif.gz_F | structure of mercuric reductase from lysinibacillus sphaericus | 0.9655 | 3 | 459 |
| 5x1y-assembly3.cif.gz_F | structure of mercuric reductase from lysinibacillus sphaericus | 0.9614 | 3 | 459 |
| 6uzi-assembly2.cif.gz_C | crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1 | 0.9586 | 1 | 456 |
| 1zx9-assembly1.cif.gz_A | crystal structure of tn501 mera | 0.9584 | 1 | 457 |
| 5tr3-assembly1.cif.gz_B | 2.5 angstrom resolution crystal structure of dihydrolipoyl dehydrogenase from pseudomonas putida in complex with fad. | 0.9573 | 1 | 456 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6LYX0_29_117_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9938 | 164 | 234 | 3.50.50.60 |
| af_Q2G0I4_328_439_3.30.390.30 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.9758 | 346 | 455 | 3.30.390.30 |
| af_P77212_327_440_3.30.390.30 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.9741 | 346 | 458 | 3.30.390.30 |
| 4k8dA02 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.965 | 148 | 269 | 3.50.50.60 |
| 1ebdA03 | Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.961 | 346 | 457 | 3.30.390.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-G0IZJ1-F1-model_v4 | FAD-dependent pyridine nucleotide-disulfide oxidoreductase | 0.9893 | 1 | 459 |
GO:0003955
GO:0050660 |
| AF-A0A7C4I456-F1-model_v4 | FAD-containing oxidoreductase | 0.9893 | 2 | 255 |
GO:0003955
GO:0050660 |
| AF-A0A2A8CVN5-F1-model_v4 | Mercuric reductase | 0.9887 | 1 | 460 |
GO:0003955
GO:0050660 |
| AF-A0A4Q3WWQ1-F1-model_v4 | FAD-containing oxidoreductase | 0.9882 | 1 | 230 |
GO:0003955
GO:0050660 |
| AF-A0A2A8CVN5-F1-model_v4 | Mercuric reductase | 0.9865 | 1 | 460 |
GO:0003955
GO:0050660 |