F359194

General Info

Members Datasets Scaffolds Average Seq Length
247 153 247 311

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_1935400|Ga0436365_1935400_656_1684
Length 342
Sequence LAHCPRTLRPAARARHPDGKTIKPEIGWTKMKTTPVTPADLRGVFAVPPLARKSDRQRTLDFEQNNLVVRHLVNGGITRLLYGGNAFLYHLTLAEYEQLLDWMSGFAGDLWAIPSAGPAYGRAMDQAALLKRHHFPAVMLLPCADPRDAAGLEQGYREFADAAQTKLIVYLKEENNFGANKEAGLDAVARLVDDGVCVGIKYAVVRDDPAQDAYLEALLKRVDRQFVVSGIGERPAVIHMRDWQLPGFTTGSGCLAPRLSQLLFEACVRGDYDAADGLREAFIPHEDLRDGWSPAKVLHAATELAGIAQTGPVPPYLSALSAAQLEQLAPVARQLDARNSRA

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
52 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
53 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
60 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
86 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
129 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
132 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
143 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
152 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
153 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.64
Nodule 0
Rhizoplane 1.62
Rhizosphere 93.52
Stem 0
Stem Tuber 0
Unclassified 1.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10017299 3300005293 Bacteria 2006
2 Ga0065707_10088425 3300005295 Bacteria 4662
3 Ga0070676_10301544 3300005328 Bacteria 1086
4 Ga0068869_100024885 3300005334 Bacteria 4151
5 Ga0068869_100044770 3300005334 Bacteria 3183
6 Ga0068868_100006339 3300005338 Bacteria 8363
7 Ga0068868_100055821 3300005338 Bacteria 3118
8 Ga0070660_100238828 3300005339 Bacteria 1480
9 Ga0070661_100036345 3300005344 Unclassified 3581
10 Ga0070668_100254360 3300005347 Bacteria 1459
11 Ga0070669_100346077 3300005353 Bacteria 1206
12 Ga0070675_100345640 3300005354 Bacteria 1318
13 Ga0070671_100017463 3300005355 Bacteria 5812
14 Ga0070671_100065608 3300005355 Bacteria 3024
15 Ga0070671_100394316 3300005355 Unclassified 1184
16 Ga0070674_100004770 3300005356 Bacteria 7767
17 Ga0070673_100016756 3300005364 Bacteria 5192
18 Ga0070673_100085581 3300005364 Bacteria 2567
19 Ga0070673_100475241 3300005364 Bacteria 1127
20 Ga0070659_100000787 3300005366 Bacteria 23097
21 Ga0070667_100015170 3300005367 Bacteria 6364
22 Ga0070701_10136741 3300005438 Bacteria 1397
23 Ga0070694_100006529 3300005444 Bacteria 7082
24 Ga0070694_100012140 3300005444 Bacteria 5351
25 Ga0070694_100118999 3300005444 Bacteria 1893
26 Ga0070708_100002366 3300005445 Bacteria 14596
27 Ga0070708_100220222 3300005445 Bacteria 1780
28 Ga0070678_100246287 3300005456 Bacteria 1497
29 Ga0070662_100126337 3300005457 Bacteria 1966
30 Ga0070681_10006681 3300005458 Bacteria 11223
31 Ga0070681_10022959 3300005458 Bacteria 6269
32 Ga0068867_100008611 3300005459 Bacteria 7204
33 Ga0070685_10004869 3300005466 Bacteria 6791
34 Ga0070706_100138819 3300005467 Unclassified 2269
35 Ga0070706_100145522 3300005467 Bacteria 2213
36 Ga0070707_100000037 3300005468 Bacteria 114708
37 Ga0070707_100076657 3300005468 Bacteria 3225
38 Ga0070698_100018182 3300005471 Bacteria 7401
39 Ga0070698_100026378 3300005471 Bacteria 6047
40 Ga0070698_100181744 3300005471 Unclassified 2041
41 Ga0070698_100425937 3300005471 Unclassified 1262
42 Ga0070699_100003214 3300005518 Bacteria 14449
43 Ga0070679_100000081 3300005530 Bacteria 71191
44 Ga0070697_100000102 3300005536 Bacteria 70177
45 Ga0068853_100007036 3300005539 Bacteria 8992
46 Ga0068853_100620006 3300005539 Bacteria 1028
47 Ga0070686_100084987 3300005544 Bacteria 2104
48 Ga0070696_100425262 3300005546 Unclassified 1044
49 Ga0070693_100309150 3300005547 Unclassified 1068
50 Ga0070704_100080945 3300005549 Bacteria 2390
51 Ga0070704_100096929 3300005549 Bacteria 2212
52 Ga0070704_100110017 3300005549 Bacteria 2095
53 Ga0068855_100122026 3300005563 Unclassified 2982
54 Ga0070664_100004477 3300005564 Bacteria 11221
55 Ga0068857_100061689 3300005577 Bacteria 3331
56 Ga0068854_100030164 3300005578 Bacteria 3760
57 Ga0070702_100107647 3300005615 Bacteria 1722
58 Ga0068852_100162956 3300005616 Bacteria 2083
59 Ga0068859_100086924 3300005617 Bacteria 3173
60 Ga0068859_100590627 3300005617 Unclassified 1204
61 Ga0068864_100011871 3300005618 Bacteria 7193
62 Ga0068864_100044577 3300005618 Bacteria 3802
63 Ga0068864_100124724 3300005618 Bacteria 2306
64 Ga0068866_10060662 3300005718 Bacteria 1962
65 Ga0068861_100473698 3300005719 Bacteria 1127
66 Ga0068861_100507418 3300005719 Bacteria 1091
67 Ga0068863_100110087 3300005841 Bacteria 2623
68 Ga0068858_100027796 3300005842 Bacteria 5255
69 Ga0068858_100062318 3300005842 Bacteria 3448
70 Ga0068858_100401591 3300005842 Bacteria 1317
71 Ga0068860_100095824 3300005843 Bacteria 2828
72 Ga0068862_100016366 3300005844 Bacteria 6171
73 Ga0081455_10017258 3300005937 Bacteria 6928
74 Ga0081455_10024634 3300005937 Bacteria 5567
75 Ga0070717_10209317 3300006028 Bacteria 1711
76 Ga0075365_10038083 3300006038 Bacteria 3123
77 Ga0075365_10215690 3300006038 Bacteria 1346
78 Ga0075367_10052639 3300006178 Bacteria 2410
79 Ga0075367_10071174 3300006178 Unclassified 2091
80 Ga0075369_10053027 3300006186 Bacteria 1759
81 Ga0075428_100040862 3300006844 Bacteria 5101
82 Ga0075428_100282362 3300006844 Bacteria 1786
83 Ga0075428_100327464 3300006844 Bacteria 1646
84 Ga0075428_100476094 3300006844 Unclassified 1336
85 Ga0075430_100102519 3300006846 Bacteria 2389
86 Ga0075431_100024289 3300006847 Bacteria 6208
87 Ga0075431_100084031 3300006847 Bacteria 3286
88 Ga0075431_100113250 3300006847 Bacteria 2800
89 Ga0075431_100133031 3300006847 Bacteria 2565
90 Ga0075431_100196598 3300006847 Bacteria 2064
91 Ga0075431_100238283 3300006847 Bacteria 1851
92 Ga0075433_10021267 3300006852 Bacteria 5440
93 Ga0075433_10030874 3300006852 Bacteria 4575
94 Ga0075434_100025731 3300006871 Bacteria 5760
95 Ga0075434_100064223 3300006871 Bacteria 3655
96 Ga0075434_100077518 3300006871 Bacteria 3318
97 Ga0075434_100536733 3300006871 Unclassified 1190
98 Ga0075429_100005766 3300006880 Bacteria 10692
99 Ga0075429_100099888 3300006880 Bacteria 2532
100 Ga0068865_100024544 3300006881 Bacteria 3956
101 Ga0097620_100086923 3300006931 Bacteria 3173
102 Ga0097620_100169731 3300006931 Bacteria 2262
103 Ga0097620_100590627 3300006931 Unclassified 1204
104 Ga0075435_100033837 3300007076 Bacteria 4044
105 Ga0099794_10001126 3300007265 Bacteria 9159
106 Ga0111539_10036100 3300009094 Bacteria 5979
107 Ga0111539_10464574 3300009094 Bacteria 1474
108 Ga0105245_10046045 3300009098 Bacteria 3897
109 Ga0105245_10053909 3300009098 Bacteria 3611
110 Ga0114129_10121512 3300009147 Bacteria 3594
111 Ga0114129_10190689 3300009147 Bacteria 2784
112 Ga0114129_10266195 3300009147 Bacteria 2295
113 Ga0114129_10310420 3300009147 Bacteria 2099
114 Ga0105243_10000187 3300009148 Bacteria 72048
115 Ga0105243_10033179 3300009148 Bacteria 3991
116 Ga0105243_10037867 3300009148 Bacteria 3752
117 Ga0105241_10408191 3300009174 Bacteria 1193
118 Ga0105242_10000008 3300009176 Bacteria 172348
119 Ga0105242_10014919 3300009176 Bacteria 6022
120 Ga0105242_10016814 3300009176 Bacteria 5693
121 Ga0105242_10033769 3300009176 Bacteria 4099
122 Ga0105248_10003843 3300009177 Bacteria 16638
123 Ga0105248_10004972 3300009177 Bacteria 14692
124 Ga0105248_10023574 3300009177 Bacteria 6837
125 Ga0105249_10062450 3300009553 Bacteria 3421
126 Ga0105249_10063218 3300009553 Bacteria 3400
127 Ga0105239_10259970 3300010375 Bacteria 1951
128 Ga0105239_10432990 3300010375 Bacteria 1491
129 Ga0105246_10048358 3300011119 Bacteria 2907
130 Ga0157373_10066963 3300013100 Unclassified 2540
131 Ga0157374_10007248 3300013296 Bacteria 9446
132 Ga0157374_10251158 3300013296 Bacteria 1740
133 Ga0157378_10077044 3300013297 Bacteria 3006
134 Ga0157378_10090134 3300013297 Bacteria 2786
135 Ga0163162_10002738 3300013306 Bacteria 16735
136 Ga0163162_10132207 3300013306 Bacteria 2604
137 Ga0157372_10097454 3300013307 Unclassified 3354
138 Ga0157375_10015193 3300013308 Bacteria 6888
139 Ga0157375_10042709 3300013308 Bacteria 4390
140 Ga0163163_10021302 3300014325 Bacteria 6115
141 Ga0163163_10029643 3300014325 Bacteria 5266
142 Ga0163163_10042317 3300014325 Bacteria 4461
143 Ga0163163_10163632 3300014325 Bacteria 2271
144 Ga0157380_10015428 3300014326 Bacteria 5615
145 Ga0157380_10073079 3300014326 Bacteria 2779
146 Ga0157377_10090967 3300014745 Unclassified 1802
147 Ga0157376_10012372 3300014969 Bacteria 6332
148 Ga0157376_10076908 3300014969 Bacteria 2853
149 Ga0163161_10020559 3300017792 Bacteria 4634
150 Ga0213876_10000054 3300021384 Bacteria 136221
151 Ga0207697_10051143 3300025315 Bacteria 1707
152 Ga0207684_10052269 3300025910 Bacteria 3467
153 Ga0207707_10000007 3300025912 Bacteria 368555
154 Ga0207707_10013931 3300025912 Bacteria 7012
155 Ga0207662_10003158 3300025918 Bacteria 8423
156 Ga0207662_10012308 3300025918 Bacteria 4761
157 Ga0207657_10079125 3300025919 Unclassified 2766
158 Ga0207652_10000062 3300025921 Bacteria 113255
159 Ga0207652_10025063 3300025921 Unclassified 4956
160 Ga0207646_10000106 3300025922 Bacteria 114093
161 Ga0207646_10066556 3300025922 Bacteria 3217
162 Ga0207681_10165181 3300025923 Bacteria 1673
163 Ga0207650_10246971 3300025925 Bacteria 1444
164 Ga0207687_10136750 3300025927 Bacteria 1854
165 Ga0207644_10020688 3300025931 Bacteria 4477
166 Ga0207706_10098825 3300025933 Bacteria 2567
167 Ga0207686_10000023 3300025934 Bacteria 172422
168 Ga0207709_10000062 3300025935 Bacteria 194534
169 Ga0207670_10107107 3300025936 Bacteria 2006
170 Ga0207670_10245775 3300025936 Bacteria 1380
171 Ga0207669_10015169 3300025937 Bacteria 3879
172 Ga0207704_10070518 3300025938 Bacteria 2213
173 Ga0207665_10131684 3300025939 Bacteria 1776
174 Ga0207691_10040142 3300025940 Bacteria 4326
175 Ga0207691_10079913 3300025940 Bacteria 2942
176 Ga0207711_10034073 3300025941 Bacteria 4312
177 Ga0207689_10014673 3300025942 Bacteria 6653
178 Ga0207689_10017969 3300025942 Bacteria 5970
179 Ga0207689_10036917 3300025942 Bacteria 4055
180 Ga0207667_10088822 3300025949 Unclassified 3195
181 Ga0207651_10184128 3300025960 Bacteria 1660
182 Ga0207651_10312826 3300025960 Unclassified 1310
183 Ga0207651_10435544 3300025960 Bacteria 1122
184 Ga0207677_10058917 3300026023 Bacteria 2647
185 Ga0207703_10047721 3300026035 Bacteria 3454
186 Ga0207703_10074541 3300026035 Bacteria 2810
187 Ga0207639_10131251 3300026041 Bacteria 2074
188 Ga0207708_10342532 3300026075 Bacteria 1225
189 Ga0207641_10052008 3300026088 Bacteria 3468
190 Ga0207641_10150573 3300026088 Bacteria 2107
191 Ga0207648_10005827 3300026089 Bacteria 12338
192 Ga0207676_10141755 3300026095 Bacteria 2058
193 Ga0207674_10000683 3300026116 Bacteria 44086
194 Ga0207674_10105662 3300026116 Bacteria 2793
195 Ga0207675_100229313 3300026118 Bacteria 1791
196 Ga0207698_10201431 3300026142 Bacteria 1783
197 Ga0207698_10357649 3300026142 Bacteria 1382
198 Ga0207428_10001857 3300027907 Bacteria 21562
199 Ga0268265_10063203 3300028380 Bacteria 2847
200 Ga0268265_10421342 3300028380 Bacteria 1239
201 Ga0268264_10047785 3300028381 Bacteria 3558
202 Ga0268264_10077967 3300028381 Bacteria 2823
203 Ga0268264_10305983 3300028381 Bacteria 1498
204 Ga0373926_0016403 3300035083 Bacteria 2533
205 Ga0373935_0112549 3300035692 Bacteria 1808
206 Ga0373927_0004961 3300035695 Bacteria 9226
207 Ga0373947_0000161 3300035725 Bacteria 35815
208 Ga0373925_0000188 3300037068 Bacteria 67960
209 Ga0436365_1074430 3300039437 Bacteria 14678
210 Ga0436365_1935400 3300039437 Bacteria 5486
211 Ga0450894_015479 3300042131 Bacteria 1010
212 Ga0439435_0036971 3300042436 Bacteria 1351
213 Ga0495638_0105778 3300046460 Bacteria 1677
214 Ga0495586_0256487 3300046535 Unclassified 998
215 Ga0495674_0145850 3300047319 Bacteria 1987
216 Ga0496104_0031672 3300048907 Bacteria 4919
217 Ga0496109_0000253 3300048912 Bacteria 51575
218 Ga0496110_0025719 3300048913 Bacteria 5033
219 Ga0496114_0669674 3300048917 Bacteria 911
220 Ga0501036_0064840 3300049572 Bacteria 3091
221 Ga0501048_0030657 3300049582 Bacteria 3891
222 Ga0501076_0096474 3300049592 Bacteria 2381
223 Ga0501079_0114855 3300049741 Bacteria 2093
224 Ga0501045_0217779 3300049824 Bacteria 1422
225 nmdc:mga03n38_33528_c2 3300050490 Bacteria 1644
226 nmdc:mga0k408_11455_c1 3300050493 Bacteria 4830
227 nmdc:mga05p37_18038_c1 3300050507 Bacteria 8525
228 nmdc:mga05p37_255302_c1 3300050507 Bacteria 2101
229 nmdc:mga09592_144432_c1 3300050508 Bacteria 2051
230 nmdc:mga09592_4398_c1 3300050508 Bacteria 11400
231 nmdc:mga09592_97870_c1 3300050508 Bacteria 2511
232 nmdc:mga06r32_186469_c1 3300050510 Bacteria 2061
233 nmdc:mga06r32_21952_c1 3300050510 Bacteria 5894
234 nmdc:mga06r32_285920_c1 3300050510 Bacteria 1636
235 nmdc:mga06r32_5255_c1 3300050510 Bacteria 11646
236 nmdc:mga06r32_69868_c1 3300050510 Bacteria 3395
237 nmdc:mga06r32_86407_c1 3300050510 Bacteria 3059
238 nmdc:mga08y16_11590_c1 3300050511 Bacteria 9265
239 nmdc:mga08y16_132265_c1 3300050511 Bacteria 2594
240 nmdc:mga0n895_17836_c1 3300050512 Bacteria 6554
241 nmdc:mga0n895_5900_c1 3300050512 Bacteria 10294
242 nmdc:mga0rr50_17474_c1 3300050513 Bacteria 4791
243 nmdc:mga0a205_19074_c1 3300050515 Bacteria 6463
244 nmdc:mga0a205_58776_c1 3300050515 Bacteria 3714
245 Ga0495595_0056819 3300053084 Bacteria 1824
246 Ga0500566_0207548 3300053094 Bacteria 984
247 Ga0500568_0000869 3300053139 Bacteria 21197

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0669674 Ga0496114_0669674_18_887 275
2 3300053094 Ga0500566_0207548 Ga0500566_0207548_51_899 279
3 3300005364 Ga0070673_100085581 Ga0070673_1000855812 280
4 3300025960 Ga0207651_10312826 Ga0207651_103128261 280
5 3300005444 Ga0070694_100012140 Ga0070694_1000121403 281
6 3300005544 Ga0070686_100084987 Ga0070686_1000849872 282
7 3300013297 Ga0157378_10077044 Ga0157378_100770442 282
8 3300006931 Ga0097620_100169731 Ga0097620_1001697312 284
9 3300026088 Ga0207641_10052008 Ga0207641_100520083 287
10 3300035083 Ga0373926_0016403 Ga0373926_0016403_1318_2223 287
11 3300035692 Ga0373935_0112549 Ga0373935_0112549_622_1527 287
12 3300035695 Ga0373927_0004961 Ga0373927_0004961_7284_8189 287
13 3300035725 Ga0373947_0000161 Ga0373947_0000161_26802_27707 287
14 3300037068 Ga0373925_0000188 Ga0373925_0000188_48325_49230 287
15 3300006847 Ga0075431_100084031 Ga0075431_1000840311 290
16 3300006871 Ga0075434_100064223 Ga0075434_1000642232 290
17 3300050512 nmdc:mga0n895_5900_c1 nmdc:mga0n895_5900_c1_8480_9439 290
18 3300005937 Ga0081455_10024634 Ga0081455_100246344 292
19 3300050493 nmdc:mga0k408_11455_c1 nmdc:mga0k408_11455_c1_1707_2615 293
20 3300006844 Ga0075428_100327464 Ga0075428_1003274642 297
21 3300006847 Ga0075431_100113250 Ga0075431_1001132502 297
22 3300050510 nmdc:mga06r32_186469_c1 nmdc:mga06r32_186469_c1_115_1053 297
23 3300006847 Ga0075431_100133031 Ga0075431_1001330313 298
24 3300050510 nmdc:mga06r32_21952_c1 nmdc:mga06r32_21952_c1_1074_2030 298
25 3300005295 Ga0065707_10088425 Ga0065707_100884252 299
26 3300006028 Ga0070717_10209317 Ga0070717_102093173 299
27 3300006844 Ga0075428_100040862 Ga0075428_1000408622 299
28 3300006880 Ga0075429_100005766 Ga0075429_1000057666 299
29 3300009147 Ga0114129_10190689 Ga0114129_101906893 299
30 3300025939 Ga0207665_10131684 Ga0207665_101316843 299
31 3300046535 Ga0495586_0256487 Ga0495586_0256487_30_971 299
32 3300050508 nmdc:mga09592_4398_c1 nmdc:mga09592_4398_c1_2129_3073 299
33 3300005339 Ga0070660_100238828 Ga0070660_1002388281 300
34 3300005354 Ga0070675_100345640 Ga0070675_1003456401 300
35 3300005364 Ga0070673_100475241 Ga0070673_1004752411 300
36 3300005366 Ga0070659_100000787 Ga0070659_1000007873 300
37 3300005539 Ga0068853_100007036 Ga0068853_1000070365 300
38 3300005563 Ga0068855_100122026 Ga0068855_1001220262 300
39 3300005564 Ga0070664_100004477 Ga0070664_1000044773 300
40 3300005577 Ga0068857_100061689 Ga0068857_1000616894 300
41 3300005618 Ga0068864_100044577 Ga0068864_1000445771 300
42 3300009174 Ga0105241_10408191 Ga0105241_104081912 300
43 3300013100 Ga0157373_10066963 Ga0157373_100669631 300
44 3300014325 Ga0163163_10163632 Ga0163163_101636323 300
45 3300025912 Ga0207707_10013931 Ga0207707_100139315 300
46 3300025919 Ga0207657_10079125 Ga0207657_100791252 300
47 3300025921 Ga0207652_10025063 Ga0207652_100250634 300
48 3300025925 Ga0207650_10246971 Ga0207650_102469711 300
49 3300025949 Ga0207667_10088822 Ga0207667_100888222 300
50 3300025960 Ga0207651_10435544 Ga0207651_104355441 300
51 3300026041 Ga0207639_10131251 Ga0207639_101312511 300
52 3300026095 Ga0207676_10141755 Ga0207676_101417552 300
53 3300026116 Ga0207674_10000683 Ga0207674_1000068333 300
54 3300042131 Ga0450894_015479 Ga0450894_015479_11_961 300
55 3300005445 Ga0070708_100220222 Ga0070708_1002202222 301
56 3300005546 Ga0070696_100425262 Ga0070696_1004252621 301
57 3300005617 Ga0068859_100086924 Ga0068859_1000869241 301
58 3300005842 Ga0068858_100062318 Ga0068858_1000623183 301
59 3300005844 Ga0068862_100016366 Ga0068862_1000163663 301
60 3300006931 Ga0097620_100086923 Ga0097620_1000869233 301
61 3300009094 Ga0111539_10464574 Ga0111539_104645742 301
62 3300009177 Ga0105248_10023574 Ga0105248_100235744 301
63 3300009553 Ga0105249_10063218 Ga0105249_100632183 301
64 3300014325 Ga0163163_10029643 Ga0163163_100296434 301
65 3300014745 Ga0157377_10090967 Ga0157377_100909671 301
66 3300026035 Ga0207703_10047721 Ga0207703_100477213 301
67 3300026116 Ga0207674_10105662 Ga0207674_101056623 301
68 3300028381 Ga0268264_10305983 Ga0268264_103059832 301
69 3300005334 Ga0068869_100024885 Ga0068869_1000248853 302
70 3300005457 Ga0070662_100126337 Ga0070662_1001263372 302
71 3300005616 Ga0068852_100162956 Ga0068852_1001629562 302
72 3300005841 Ga0068863_100110087 Ga0068863_1001100873 302
73 3300005842 Ga0068858_100401591 Ga0068858_1004015911 302
74 3300006871 Ga0075434_100536733 Ga0075434_1005367331 302
75 3300009148 Ga0105243_10037867 Ga0105243_100378672 302
76 3300009176 Ga0105242_10033769 Ga0105242_100337692 302
77 3300013296 Ga0157374_10251158 Ga0157374_102511582 302
78 3300025923 Ga0207681_10165181 Ga0207681_101651812 302
79 3300025933 Ga0207706_10098825 Ga0207706_100988252 302
80 3300025942 Ga0207689_10036917 Ga0207689_100369173 302
81 3300026088 Ga0207641_10150573 Ga0207641_101505732 302
82 3300047319 Ga0495674_0145850 Ga0495674_0145850_477_1433 302
83 3300048913 Ga0496110_0025719 Ga0496110_0025719_3936_4892 302
84 3300053084 Ga0495595_0056819 Ga0495595_0056819_409_1365 302
85 3300005328 Ga0070676_10301544 Ga0070676_103015441 303
86 3300005458 Ga0070681_10022959 Ga0070681_100229591 303
87 3300005530 Ga0070679_100000081 Ga0070679_10000008158 303
88 3300005547 Ga0070693_100309150 Ga0070693_1003091501 303
89 3300005578 Ga0068854_100030164 Ga0068854_1000301642 303
90 3300006852 Ga0075433_10021267 Ga0075433_100212672 303
91 3300006871 Ga0075434_100025731 Ga0075434_1000257315 303
92 3300007076 Ga0075435_100033837 Ga0075435_1000338372 303
93 3300010375 Ga0105239_10432990 Ga0105239_104329902 303
94 3300013307 Ga0157372_10097454 Ga0157372_100974542 303
95 3300025912 Ga0207707_10000007 Ga0207707_1000000797 303
96 3300025921 Ga0207652_10000062 Ga0207652_100000621 303
97 3300048907 Ga0496104_0031672 Ga0496104_0031672_1731_2750 303
98 3300050512 nmdc:mga0n895_17836_c1 nmdc:mga0n895_17836_c1_3527_4453 303
99 3300050513 nmdc:mga0rr50_17474_c1 nmdc:mga0rr50_17474_c1_584_1540 303
100 3300005444 Ga0070694_100118999 Ga0070694_1001189992 304
101 3300005617 Ga0068859_100590627 Ga0068859_1005906271 304
102 3300006038 Ga0075365_10215690 Ga0075365_102156902 304
103 3300006844 Ga0075428_100282362 Ga0075428_1002823622 304
104 3300006852 Ga0075433_10030874 Ga0075433_100308743 304
105 3300006931 Ga0097620_100590627 Ga0097620_1005906271 304
106 3300009147 Ga0114129_10121512 Ga0114129_101215122 304
107 3300009147 Ga0114129_10310420 Ga0114129_103104201 304
108 3300009148 Ga0105243_10000187 Ga0105243_100001876 304
109 3300009176 Ga0105242_10000008 Ga0105242_1000000892 304
110 3300014326 Ga0157380_10015428 Ga0157380_100154283 304
111 3300025934 Ga0207686_10000023 Ga0207686_1000002392 304
112 3300025935 Ga0207709_10000062 Ga0207709_10000062107 304
113 3300028380 Ga0268265_10063203 Ga0268265_100632032 304
114 3300042436 Ga0439435_0036971 Ga0439435_0036971_24_950 304
115 3300049572 Ga0501036_0064840 Ga0501036_0064840_949_1902 304
116 3300049582 Ga0501048_0030657 Ga0501048_0030657_1912_2865 304
117 3300049592 Ga0501076_0096474 Ga0501076_0096474_231_1184 304
118 3300049741 Ga0501079_0114855 Ga0501079_0114855_398_1351 304
119 3300050507 nmdc:mga05p37_255302_c1 nmdc:mga05p37_255302_c1_1032_1979 304
120 3300050511 nmdc:mga08y16_11590_c1 nmdc:mga08y16_11590_c1_2925_3881 304
121 3300050515 nmdc:mga0a205_19074_c1 nmdc:mga0a205_19074_c1_5436_6383 304
122 3300005536 Ga0070697_100000102 Ga0070697_10000010242 305
123 3300005293 Ga0065715_10017299 Ga0065715_100172991 306
124 3300005334 Ga0068869_100044770 Ga0068869_1000447702 306
125 3300005338 Ga0068868_100006339 Ga0068868_1000063394 306
126 3300005338 Ga0068868_100055821 Ga0068868_1000558213 306
127 3300005344 Ga0070661_100036345 Ga0070661_1000363453 306
128 3300005347 Ga0070668_100254360 Ga0070668_1002543602 306
129 3300005353 Ga0070669_100346077 Ga0070669_1003460771 306
130 3300005355 Ga0070671_100017463 Ga0070671_1000174633 306
131 3300005355 Ga0070671_100065608 Ga0070671_1000656082 306
132 3300005355 Ga0070671_100394316 Ga0070671_1003943161 306
133 3300005356 Ga0070674_100004770 Ga0070674_1000047707 306
134 3300005364 Ga0070673_100016756 Ga0070673_1000167564 306
135 3300005367 Ga0070667_100015170 Ga0070667_1000151703 306
136 3300005438 Ga0070701_10136741 Ga0070701_101367411 306
137 3300005444 Ga0070694_100006529 Ga0070694_1000065295 306
138 3300005445 Ga0070708_100002366 Ga0070708_1000023663 306
139 3300005456 Ga0070678_100246287 Ga0070678_1002462871 306
140 3300005458 Ga0070681_10006681 Ga0070681_100066813 306
141 3300005459 Ga0068867_100008611 Ga0068867_1000086115 306
142 3300005466 Ga0070685_10004869 Ga0070685_100048692 306
143 3300005467 Ga0070706_100138819 Ga0070706_1001388191 306
144 3300005467 Ga0070706_100145522 Ga0070706_1001455222 306
145 3300005468 Ga0070707_100000037 Ga0070707_10000003762 306
146 3300005468 Ga0070707_100076657 Ga0070707_1000766572 306
147 3300005471 Ga0070698_100018182 Ga0070698_1000181822 306
148 3300005471 Ga0070698_100026378 Ga0070698_1000263784 306
149 3300005471 Ga0070698_100181744 Ga0070698_1001817441 306
150 3300005471 Ga0070698_100425937 Ga0070698_1004259371 306
151 3300005518 Ga0070699_100003214 Ga0070699_1000032143 306
152 3300005539 Ga0068853_100620006 Ga0068853_1006200061 306
153 3300005549 Ga0070704_100080945 Ga0070704_1000809452 306
154 3300005549 Ga0070704_100096929 Ga0070704_1000969292 306
155 3300005549 Ga0070704_100110017 Ga0070704_1001100172 306
156 3300005615 Ga0070702_100107647 Ga0070702_1001076472 306
157 3300005618 Ga0068864_100011871 Ga0068864_1000118711 306
158 3300005618 Ga0068864_100124724 Ga0068864_1001247242 306
159 3300005718 Ga0068866_10060662 Ga0068866_100606621 306
160 3300005719 Ga0068861_100473698 Ga0068861_1004736981 306
161 3300005719 Ga0068861_100507418 Ga0068861_1005074181 306
162 3300005842 Ga0068858_100027796 Ga0068858_1000277962 306
163 3300005843 Ga0068860_100095824 Ga0068860_1000958243 306
164 3300005937 Ga0081455_10017258 Ga0081455_100172583 306
165 3300006038 Ga0075365_10038083 Ga0075365_100380833 306
166 3300006178 Ga0075367_10052639 Ga0075367_100526392 306
167 3300006178 Ga0075367_10071174 Ga0075367_100711742 306
168 3300006186 Ga0075369_10053027 Ga0075369_100530272 306
169 3300006844 Ga0075428_100476094 Ga0075428_1004760942 306
170 3300006846 Ga0075430_100102519 Ga0075430_1001025192 306
171 3300006847 Ga0075431_100024289 Ga0075431_1000242893 306
172 3300006847 Ga0075431_100196598 Ga0075431_1001965982 306
173 3300006847 Ga0075431_100238283 Ga0075431_1002382832 306
174 3300006871 Ga0075434_100077518 Ga0075434_1000775183 306
175 3300006880 Ga0075429_100099888 Ga0075429_1000998882 306
176 3300006881 Ga0068865_100024544 Ga0068865_1000245442 306
177 3300007265 Ga0099794_10001126 Ga0099794_100011263 306
178 3300009094 Ga0111539_10036100 Ga0111539_100361003 306
179 3300009098 Ga0105245_10046045 Ga0105245_100460452 306
180 3300009098 Ga0105245_10053909 Ga0105245_100539094 306
181 3300009147 Ga0114129_10266195 Ga0114129_102661952 306
182 3300009148 Ga0105243_10033179 Ga0105243_100331791 306
183 3300009176 Ga0105242_10014919 Ga0105242_100149193 306
184 3300009176 Ga0105242_10016814 Ga0105242_100168144 306
185 3300009177 Ga0105248_10003843 Ga0105248_1000384310 306
186 3300009177 Ga0105248_10004972 Ga0105248_1000497212 306
187 3300009553 Ga0105249_10062450 Ga0105249_100624502 306
188 3300010375 Ga0105239_10259970 Ga0105239_102599701 306
189 3300011119 Ga0105246_10048358 Ga0105246_100483583 306
190 3300013296 Ga0157374_10007248 Ga0157374_100072483 306
191 3300013297 Ga0157378_10090134 Ga0157378_100901343 306
192 3300013306 Ga0163162_10002738 Ga0163162_100027386 306
193 3300013306 Ga0163162_10132207 Ga0163162_101322072 306
194 3300013308 Ga0157375_10015193 Ga0157375_100151935 306
195 3300013308 Ga0157375_10042709 Ga0157375_100427094 306
196 3300014325 Ga0163163_10021302 Ga0163163_100213024 306
197 3300014325 Ga0163163_10042317 Ga0163163_100423173 306
198 3300014326 Ga0157380_10073079 Ga0157380_100730791 306
199 3300014969 Ga0157376_10012372 Ga0157376_100123722 306
200 3300014969 Ga0157376_10076908 Ga0157376_100769082 306
201 3300017792 Ga0163161_10020559 Ga0163161_100205592 306
202 3300021384 Ga0213876_10000054 Ga0213876_100000548 306
203 3300025315 Ga0207697_10051143 Ga0207697_100511431 306
204 3300025910 Ga0207684_10052269 Ga0207684_100522694 306
205 3300025918 Ga0207662_10003158 Ga0207662_100031581 306
206 3300025918 Ga0207662_10012308 Ga0207662_100123082 306
207 3300025922 Ga0207646_10000106 Ga0207646_1000010646 306
208 3300025922 Ga0207646_10066556 Ga0207646_100665563 306
209 3300025927 Ga0207687_10136750 Ga0207687_101367502 306
210 3300025931 Ga0207644_10020688 Ga0207644_100206883 306
211 3300025936 Ga0207670_10107107 Ga0207670_101071071 306
212 3300025936 Ga0207670_10245775 Ga0207670_102457752 306
213 3300025937 Ga0207669_10015169 Ga0207669_100151692 306
214 3300025938 Ga0207704_10070518 Ga0207704_100705182 306
215 3300025940 Ga0207691_10040142 Ga0207691_100401424 306
216 3300025940 Ga0207691_10079913 Ga0207691_100799133 306
217 3300025941 Ga0207711_10034073 Ga0207711_100340733 306
218 3300025942 Ga0207689_10014673 Ga0207689_100146734 306
219 3300025942 Ga0207689_10017969 Ga0207689_100179693 306
220 3300025960 Ga0207651_10184128 Ga0207651_101841282 306
221 3300026023 Ga0207677_10058917 Ga0207677_100589172 306
222 3300026035 Ga0207703_10074541 Ga0207703_100745411 306
223 3300026075 Ga0207708_10342532 Ga0207708_103425321 306
224 3300026089 Ga0207648_10005827 Ga0207648_100058273 306
225 3300026118 Ga0207675_100229313 Ga0207675_1002293131 306
226 3300026142 Ga0207698_10201431 Ga0207698_102014311 306
227 3300026142 Ga0207698_10357649 Ga0207698_103576492 306
228 3300027907 Ga0207428_10001857 Ga0207428_100018575 306
229 3300028380 Ga0268265_10421342 Ga0268265_104213422 306
230 3300028381 Ga0268264_10047785 Ga0268264_100477853 306
231 3300028381 Ga0268264_10077967 Ga0268264_100779671 306
232 3300039437 Ga0436365_1074430 Ga0436365_1074430_7249_8187 306
233 3300039437 Ga0436365_1935400 Ga0436365_1935400_656_1684 306
234 3300046460 Ga0495638_0105778 Ga0495638_0105778_493_1440 306
235 3300048912 Ga0496109_0000253 Ga0496109_0000253_46298_47236 306
236 3300049824 Ga0501045_0217779 Ga0501045_0217779_20_958 306
237 3300050490 nmdc:mga03n38_33528_c2 nmdc:mga03n38_33528_c2_518_1492 306
238 3300050507 nmdc:mga05p37_18038_c1 nmdc:mga05p37_18038_c1_673_1611 306
239 3300050508 nmdc:mga09592_144432_c1 nmdc:mga09592_144432_c1_155_1105 306
240 3300050508 nmdc:mga09592_97870_c1 nmdc:mga09592_97870_c1_342_1292 306
241 3300050510 nmdc:mga06r32_285920_c1 nmdc:mga06r32_285920_c1_213_1151 306
242 3300050510 nmdc:mga06r32_5255_c1 nmdc:mga06r32_5255_c1_5983_6921 306
243 3300050510 nmdc:mga06r32_69868_c1 nmdc:mga06r32_69868_c1_94_1044 306
244 3300050510 nmdc:mga06r32_86407_c1 nmdc:mga06r32_86407_c1_1149_2087 306
245 3300050511 nmdc:mga08y16_132265_c1 nmdc:mga08y16_132265_c1_801_1739 306
246 3300050515 nmdc:mga0a205_58776_c1 nmdc:mga0a205_58776_c1_1973_2911 306
247 3300053139 Ga0500568_0000869 Ga0500568_0000869_18474_19421 306

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xl9-assembly1.cif.gz_A crystal structure of dihydrodipicolinate synthase dapa-2 (ba3935) from bacillus anthracis. 0.8906 11 301
3l21-assembly2.cif.gz_C the crystal structure of a dimeric mutant of dihydrodipicolinate synthase (dapa, rv2753c) from mycobacterium tuberculosis - dhdps-a204r 0.883 14 303
4icn-assembly1.cif.gz_B dihydrodipicolinate synthase from shewanella benthica 0.8793 11 303
1f6k-assembly1.cif.gz_C crystal structure analysis of n-acetylneuraminate lyase from haemophilus influenzae: crystal form ii 0.8781 11 304
3hij-assembly1.cif.gz_D crystal structure of dihydrodipicolinate synthase from bacillus anthracis in complex with its substrate, pyruvate 0.8761 11 301
ID Description Score Start End Superfamily
1xl9D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8792 11 301 3.20.20.70
4uxdD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8752 12 289 3.20.20.70
4uuiA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8723 9 305 3.20.20.70
2yxgD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8713 12 303 3.20.20.70
2rfgB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8689 11 305 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2V7TPE5-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9847 119 305
AF-A0A2V8IV65-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9839 4 303 GO:0016829
AF-A0A7T9GE55-F1-model_v4 deleted 0.9802 1 305
AF-A0A2V8PD28-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9795 186 303
AF-A0A7Y5U3N5-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9785 158 303

Feature Viewer

pLDDT pTM Quality
94.18 0.92 High
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Predicted Structure (AlphaFold2)

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