F359452

General Info

Members Datasets Scaffolds Average Seq Length
247 163 494 557

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2582581867|2585403331
Length 639
Sequence TLHNKLFFIGNMGIQALASVAERYFHTLLSTTLTSLRCLPAVSVLPLKMASRFASVITKGNNVTNGAASALQAFEASGSGISETLEAARSQVEERFLEGGTVLLSVMDVLNRLLSSLDNVTKALDASEPSDTDADLRATVNSLTDLPISERARQDALSSLADTGNSLRKHVADMQETMRYLRTFAVTAKITGAGLPEFAGFAQEILERIYSGTAEVNGFAAHLDSLEKDVKGALSFGTAAARSYSETVPDVARALQDDARKIAEHRKNLAAIARDVSAIARAIQSKVASTLSALQVGDITRQRIEHVQSTFALLDEFLGAEDGRKLDADARRRLQNVVHHLTAAQMNDMCKDFHRDSQSVVRTIASFGQDTQEILRMRDQMSGGGQGNFIRALESSVSAAHEIVRQVDQATRQADQVSQSTLRTAAKLLEATGNIRVVKTDIHYMALNTNLRCSRLGEEGKSINVVTAELRIFAAKLDESADAIVNGLPTLEAAAGRIAPANADPAGGLGQNLTSAVGNIRAAADTIEDELKVLSEHGREVANKISLLIGKLDFQRDLCEVLARCADVLEEVAGAEIADISDIAEAVAALDRKIFKLYTMVQERNVHRDIVPAMKQGTTSVAEAAKVGDDEDLFAGALF

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
25 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
30 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
31 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
32 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
34 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
38 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
41 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
46 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
49 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
50 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
51 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
52 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
53 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
54 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
55 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
56 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
57 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
58 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
59 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
60 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
61 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
62 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
63 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
64 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
65 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
66 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
67 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
68 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
69 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
70 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
71 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
72 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
73 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
74 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
75 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
82 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
83 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
84 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
85 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
86 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
87 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
88 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
89 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
90 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
91 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
92 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
93 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
94 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
95 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
96 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
97 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
98 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
99 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
100 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
101 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
102 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
103 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
104 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
105 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
106 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
107 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
108 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
109 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
110 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
111 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
112 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
113 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
114 2643221558 Rhizobium sp. Root149 Isolate Unclassified
115 2643221568 Rhizobium sp. Root564 Isolate Unclassified
116 2643221599 Rhizobium sp. Root708 Isolate Unclassified
117 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
118 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
119 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
120 2643221688 Rhizobium sp. Root482 Isolate Unclassified
121 2643221693 Rhizobium sp. Root491 Isolate Unclassified
122 2643221718 Rhizobium sp. Root268 Isolate Unclassified
123 2643221719 Rhizobium sp. Root274 Isolate Unclassified
124 2738541293 Rhizobium sp. GV031 Isolate Unclassified
125 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
126 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
127 2791355265 Rhizobium sp. H4 Isolate Nodule
128 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
129 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
130 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
131 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
132 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
133 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
134 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
135 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
136 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
137 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
138 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
139 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
140 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
141 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
142 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
143 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
144 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
145 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
146 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
147 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
148 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
149 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
150 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
151 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
152 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
153 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
154 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
155 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
156 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
157 8018176218 Rhizobium sp. N122 Isolate Nodule
158 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
159 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
160 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
161 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
162 8056382006 Rhizobium croatiense 13T Isolate Nodule
163 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 70.85
Metatranscriptomes 0
Isolates 29.15

Biome Distribution

Category Percentage (%)
Aerial Root 0.4
Bulb 0
Endosphere 32.39
Nodule 6.88
Rhizoplane 0.4
Rhizosphere 26.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1001080 3300002773 Bacteria 12847
2 JGI25150J39212_1000255 3300002774 Bacteria 28192
3 JGI25159J45721_1001300 3300002987 Bacteria 10540
4 JGI25159J45721_1002128 3300002987 Bacteria 7753
5 JGI25151J46595_10000031 3300003187 Bacteria 197865
6 JGI25151J46595_10002392 3300003187 Bacteria 11357
7 JGI25153J46596_10005020 3300003215 Bacteria 7011
8 JGI25153J46596_10008757 3300003215 Bacteria 4792
9 JGI25153J46596_10013411 3300003215 Bacteria 3461
10 rootH1_10166712 3300003323 Bacteria 3283
11 rootH1_10226522 3300003323 Bacteria 4140
12 JGI25160J50197_1000114 3300003354 Bacteria 75947
13 JGI25160J50197_1000481 3300003354 Bacteria 24245
14 JGI25160J50197_1004470 3300003354 Bacteria 6043
15 JGI25161J50226_1000089 3300003374 Bacteria 73775
16 JGI25161J50226_1000114 3300003374 Bacteria 62957
17 JGI25161J50226_1002640 3300003374 Bacteria 4490
18 Ga0055526_1002905 3300003771 Bacteria 11273
19 Ga0055526_1003194 3300003771 Bacteria 10607
20 Ga0055524_1001621 3300003775 Bacteria 12558
21 Ga0055536_1002771 3300003781 Bacteria 9701
22 Ga0055528_1001115 3300003790 Bacteria 17596
23 Ga0055528_1005573 3300003790 Bacteria 5830
24 Ga0055528_1006546 3300003790 Bacteria 5277
25 Ga0055540_1001686 3300003792 Bacteria 12746
26 Ga0055531_10002468 3300003794 Bacteria 12351
27 Ga0055543_1000002 3300004625 Bacteria 390020
28 Ga0055543_1000077 3300004625 Bacteria 86457
29 Ga0055543_1002295 3300004625 Bacteria 6455
30 Ga0065165_1001020 3300005262 Bacteria 34014
31 Ga0065165_1006287 3300005262 Bacteria 6298
32 Ga0065165_1011781 3300005262 Bacteria 3607
33 Ga0070670_100000108 3300005331 Bacteria 77575
34 Ga0070665_100002723 3300005548 Bacteria 19147
35 Ga0075365_10000803 3300006038 Bacteria 12890
36 Ga0075362_10003484 3300006177 Bacteria 5515
37 Ga0075367_10001686 3300006178 Bacteria 9655
38 Ga0075367_10022503 3300006178 Bacteria 3536
39 Ga0075366_10008485 3300006195 Bacteria 5715
40 Ga0105243_10019119 3300009148 Bacteria 5195
41 Ga0123341_1000014 3300009765 Bacteria 91980
42 Ga0105246_10070891 3300011119 Bacteria 2452
43 Ga0157373_10002805 3300013100 Bacteria 13178
44 Ga0157371_10000205 3300013102 Bacteria 86623
45 Ga0157371_10068932 3300013102 Bacteria 2504
46 Ga0157370_10000752 3300013104 Bacteria 40508
47 Ga0209436_100050 3300025208 Bacteria 65942
48 Ga0207425_1000058 3300025245 Bacteria 149214
49 Ga0207425_1005578 3300025245 Bacteria 3568
50 Ga0209129_1000107 3300025258 Bacteria 154705
51 Ga0209129_1000559 3300025258 Bacteria 25651
52 Ga0209129_1001023 3300025258 Bacteria 16674
53 Ga0209673_1000312 3300025273 Bacteria 89594
54 Ga0209673_1002769 3300025273 Bacteria 11438
55 Ga0209673_1004184 3300025273 Bacteria 7880
56 Ga0209130_1000030 3300025284 Bacteria 323323
57 Ga0209130_1000083 3300025284 Bacteria 162582
58 Ga0209676_1002725 3300025292 Bacteria 11871
59 Ga0209025_1000083 3300025294 Bacteria 265556
60 Ga0209025_1002468 3300025294 Bacteria 19479
61 Ga0209564_1000125 3300025295 Bacteria 201709
62 Ga0209564_1000364 3300025295 Bacteria 84138
63 Ga0209564_1017087 3300025295 Bacteria 2849
64 Ga0209758_1000090 3300025297 Bacteria 246564
65 Ga0209758_1000291 3300025297 Bacteria 98850
66 Ga0209758_1000621 3300025297 Bacteria 54479
67 Ga0209758_1003404 3300025297 Bacteria 14533
68 Ga0209758_1010885 3300025297 Bacteria 5361
69 Ga0209050_1005792 3300025298 Bacteria 7600
70 Ga0209256_1005980 3300025299 Bacteria 6687
71 Ga0209256_1006462 3300025299 Bacteria 6187
72 Ga0207426_1000047 3300025302 Bacteria 417011
73 Ga0207426_1000173 3300025302 Bacteria 162697
74 Ga0207426_1001122 3300025302 Bacteria 24415
75 Ga0209051_1000778 3300025303 Bacteria 33824
76 Ga0209051_1001751 3300025303 Bacteria 17269
77 Ga0209051_1031918 3300025303 Bacteria 2018
78 Ga0209257_1004000 3300025304 Bacteria 11900
79 Ga0207650_10001272 3300025925 Bacteria 18294
80 Ga0268266_10005125 3300028379 Bacteria 12351
81 Ga0307515_10001512 3300028794 Bacteria 52053
82 Ga0307515_10026686 3300028794 Bacteria 9925
83 Ga0307513_10035158 3300031456 Bacteria 5611
84 Ga0307513_10057052 3300031456 Bacteria 4164
85 Ga0395905_0001069 3300037471 Bacteria 34516
86 Ga0439465_0008598 3300041413 Bacteria 3222
87 Ga0439465_0010064 3300041413 Bacteria 2975
88 Ga0451839_0565997 3300041496 Bacteria 2894
89 Ga0495638_0000377 3300046460 Bacteria 55414
90 Ga0495650_0012229 3300046471 Bacteria 4631
91 Ga0495605_0000579 3300046474 Bacteria 29674
92 Ga0495583_0007495 3300046506 Bacteria 6834
93 Ga0495606_0001683 3300046507 Bacteria 28536
94 Ga0495606_0008610 3300046507 Bacteria 8818
95 Ga0495606_0030273 3300046507 Bacteria 3784
96 Ga0495610_0001302 3300046512 Bacteria 22239
97 Ga0495620_0042826 3300046515 Bacteria 1975
98 Ga0495631_0005527 3300046518 Bacteria 6607
99 Ga0495632_0002151 3300046519 Bacteria 15285
100 Ga0495643_0002831 3300046522 Bacteria 13208
101 Ga0495643_0015176 3300046522 Bacteria 4561
102 Ga0495643_0034008 3300046522 Bacteria 2815
103 Ga0495643_0038008 3300046522 Bacteria 2638
104 Ga0495611_0001561 3300046648 Bacteria 11220
105 Ga0495625_0003354 3300046660 Bacteria 16109
106 Ga0495625_0021156 3300046660 Bacteria 5012
107 Ga0495625_0042728 3300046660 Bacteria 3291
108 Ga0495588_0005620 3300046674 Bacteria 5588
109 Ga0495636_0023431 3300047318 Bacteria 2499
110 Ga0495672_0012299 3300047320 Bacteria 5981
111 Ga0495681_0001265 3300047470 Bacteria 19188
112 Ga0495686_0000685 3300047472 Bacteria 45846
113 Ga0495686_0002205 3300047472 Bacteria 18921
114 Ga0495686_0013255 3300047472 Bacteria 5726
115 Ga0495686_0054556 3300047472 Bacteria 2502
116 Ga0496116_0000061 3300048919 Bacteria 271860
117 Ga0496116_0001128 3300048919 Bacteria 31826
118 Ga0496116_0004101 3300048919 Bacteria 14064
119 Ga0496116_0010340 3300048919 Bacteria 7835
120 Ga0496116_0011924 3300048919 Bacteria 7144
121 Ga0496116_0016534 3300048919 Bacteria 5767
122 Ga0496116_0074320 3300048919 Bacteria 2138
123 Ga0496116_0096557 3300048919 Bacteria 1780
124 Ga0496117_0000002 3300048920 Bacteria 2483758
125 Ga0496117_0004655 3300048920 Bacteria 14926
126 Ga0496117_0084253 3300048920 Bacteria 2075
127 Ga0496118_0000501 3300048921 Bacteria 64803
128 Ga0496118_0085657 3300048921 Bacteria 2193
129 Ga0496120_0000093 3300048923 Bacteria 146905
130 Ga0496120_0012370 3300048923 Bacteria 5813
131 Ga0496120_0048310 3300048923 Bacteria 2449
132 Ga0496121_0000005 3300048924 Bacteria 1034486
133 Ga0496121_0007947 3300048924 Bacteria 12677
134 Ga0496121_0010985 3300048924 Bacteria 10109
135 Ga0496121_0011657 3300048924 Bacteria 9716
136 Ga0496121_0014326 3300048924 Bacteria 8427
137 Ga0496121_0064965 3300048924 Bacteria 2972
138 Ga0496122_0000004 3300048925 Bacteria 645283
139 Ga0496122_0005799 3300048925 Bacteria 14518
140 Ga0496122_0005804 3300048925 Bacteria 14510
141 Ga0496122_0007095 3300048925 Bacteria 12585
142 Ga0496122_0080709 3300048925 Bacteria 2267
143 Ga0496123_0000007 3300048926 Bacteria 645283
144 Ga0496123_0004709 3300048926 Bacteria 14124
145 Ga0496123_0005666 3300048926 Bacteria 12471
146 Ga0496123_0063686 3300048926 Bacteria 2353
147 Ga0496124_0000091 3300048927 Bacteria 189706
148 Ga0496124_0003535 3300048927 Bacteria 19011
149 Ga0496124_0003584 3300048927 Bacteria 18872
150 Ga0496124_0031465 3300048927 Bacteria 4696
151 Ga0496124_0056054 3300048927 Bacteria 3326
152 Ga0496124_0100853 3300048927 Bacteria 2339
153 Ga0496125_0000163 3300048928 Bacteria 148473
154 Ga0496125_0006805 3300048928 Bacteria 12275
155 Ga0496125_0025450 3300048928 Bacteria 5418
156 Ga0496126_0002606 3300048929 Bacteria 24027
157 Ga0496126_0007184 3300048929 Bacteria 12260
158 Ga0496126_0122549 3300048929 Bacteria 2253
159 Ga0501034_0096782 3300049571 Bacteria 2947
160 Ga0501038_0013281 3300049574 Bacteria 7511
161 Ga0501080_0020777 3300049742 Bacteria 6079
162 Ga0501044_0098685 3300049823 Bacteria 2940
163 nmdc:mga03n38_15318_c1 3300050490 Bacteria 2958
164 nmdc:mga0yw44_22950_c1 3300050492 Bacteria 3509
165 nmdc:mga06z11_26445_c2 3300050494 Bacteria 2469
166 Ga0500557_000198 3300053105 Bacteria 10179
167 Ga0500594_0000868 3300053118 Bacteria 6471
168 Ga0500561_0000046 3300053137 Bacteria 24514
169 Ga0500616_0000232 3300053153 Bacteria 87382
170 Ga0500616_0000526 3300053153 Bacteria 48257
171 Ga0500622_0000237 3300053156 Bacteria 57253
172 Ga0500624_000937 3300053157 Bacteria 6084
173 Ga0500634_0002213 3300053161 Bacteria 8095
174 Ga0500636_0000009 3300053177 Bacteria 155504
175 Ga0500636_0000262 3300053177 Bacteria 29181
176 2585403331 2582581867 Bacteria 7184437
177 2510843055 2510461069 Bacteria 5505000
178 2511172298 2510917026 Bacteria 7046020
179 2511187145 2510917028 Bacteria 6185411
180 2511200146 2510917030 Bacteria 7460662
181 2513869720 2513237138 Bacteria 7368160
182 2524460160 2524023209 Bacteria 6679728
183 2554248686 2554235003 Bacteria 5877155
184 2559295774 2558860242 Bacteria 5568029
185 2561467187 2558860983 Bacteria 4133860
186 2585167669 2582581283 Bacteria 6030556
187 2585202572 2582581294 Bacteria 6626667
188 2585224876 2582581298 Bacteria 7315509
189 2585227709 2582581299 Bacteria 6518058
190 2585257720 2582581304 Bacteria 5831370
191 2585265921 2582581306 Bacteria 6450535
192 2585390112 2582581865 Bacteria 6644329
193 2585547432 2585427529 Bacteria 7395659
194 2585823628 2585427590 Bacteria 6824633
195 2585845247 2585427594 Bacteria 6180594
196 2585998239 2585427633 Bacteria 6413184
197 2586002815 2585427634 Bacteria 6455027
198 2643812399 2643221558 Bacteria 5460675
199 2643854349 2643221568 Bacteria 5187270
200 2644006312 2643221599 Bacteria 6292121
201 2644208599 2643221637 Bacteria 5345260
202 2644241772 2643221643 Bacteria 5749658
203 2644300951 2643221653 Bacteria 4569637
204 2644493907 2643221688 Bacteria 5260751
205 2644523259 2643221693 Bacteria 5513853
206 2644652129 2643221718 Bacteria 5345506
207 2644659173 2643221719 Bacteria 4568197
208 2738800542 2738541293 Bacteria 7065685
209 2776915840 2775507049 Bacteria 6284736
210 2793282488 2791355253 Bacteria 5171699
211 2793353619 2791355265 Bacteria 6539969
212 2808987492 2808606387 Bacteria 5697198
213 2819243543 2818991272 Bacteria 4622173
214 2842288876 2842285085 Bacteria 6011953
215 2842298614 2842298080 Bacteria 6123127
216 2842359519 2842357229 Bacteria 6485165
217 2842406457 2842402390 Bacteria 6681310
218 2842413116 2842409023 Bacteria 6687331
219 2842419759 2842415677 Bacteria 6596907
220 2842510643 2842509118 Bacteria 6850950
221 2852391105 2852387548 Bacteria 8025568
222 2854901022 2854896431 Bacteria 5869725
223 2854918076 2854916844 Bacteria 5725939
224 2899804964 2899803654 Bacteria 5577784
225 2899848968 2899845264 Bacteria 5672268
226 2919168738 2919166419 Bacteria 4952238
227 2919172678 2919171160 Bacteria 6499771
228 2923558873 2923556063 Bacteria 6793593
229 2926762375 2926760298 Bacteria 5505990
230 2929143188 2929138655 Bacteria 5810547
231 2978971429 2978969890 Bacteria 5400756
232 2979092355 2979089926 Bacteria 5670289
233 2979100255 2979095461 Bacteria 5669583
234 2984588574 2984587000 Bacteria 5263363
235 2989781460 2989776772 Bacteria 4843317
236 3003930594 3003930520 Bacteria 5667563
237 3005455456 3005452660 Bacteria 5889319
238 650740985 650716007 Bacteria 5573770
239 8005248078 8005246636 Bacteria 4933972
240 8005660935 8005658619 Bacteria 4500593
241 8018178547 8018176218 Bacteria 6896178
242 8024489272 8024486573 Bacteria 6540512
243 8046773310 8046767195 Bacteria 7547379
244 8054465415 8054460903 Bacteria 4872905
245 8055435512 8055431914 Bacteria 4551896
246 8056386937 8056382006 Bacteria 6408074
247 8057580959 8057575449 Bacteria 7367519
248 JGI25152J39213_1001080
249 JGI25150J39212_1000255
250 JGI25159J45721_1001300
251 JGI25159J45721_1002128
252 JGI25151J46595_10000031
253 JGI25151J46595_10002392
254 JGI25153J46596_10005020
255 JGI25153J46596_10008757
256 JGI25153J46596_10013411
257 rootH1_10166712
258 rootH1_10226522
259 JGI25160J50197_1000114
260 JGI25160J50197_1000481
261 JGI25160J50197_1004470
262 JGI25161J50226_1000089
263 JGI25161J50226_1000114
264 JGI25161J50226_1002640
265 Ga0055526_1002905
266 Ga0055526_1003194
267 Ga0055524_1001621
268 Ga0055536_1002771
269 Ga0055528_1001115
270 Ga0055528_1005573
271 Ga0055528_1006546
272 Ga0055540_1001686
273 Ga0055531_10002468
274 Ga0055543_1000002
275 Ga0055543_1000077
276 Ga0055543_1002295
277 Ga0065165_1001020
278 Ga0065165_1006287
279 Ga0065165_1011781
280 Ga0070670_100000108
281 Ga0070665_100002723
282 Ga0075365_10000803
283 Ga0075362_10003484
284 Ga0075367_10001686
285 Ga0075367_10022503
286 Ga0075366_10008485
287 Ga0105243_10019119
288 Ga0123341_1000014
289 Ga0105246_10070891
290 Ga0157373_10002805
291 Ga0157371_10000205
292 Ga0157371_10068932
293 Ga0157370_10000752
294 Ga0209436_100050
295 Ga0207425_1000058
296 Ga0207425_1005578
297 Ga0209129_1000107
298 Ga0209129_1000559
299 Ga0209129_1001023
300 Ga0209673_1000312
301 Ga0209673_1002769
302 Ga0209673_1004184
303 Ga0209130_1000030
304 Ga0209130_1000083
305 Ga0209676_1002725
306 Ga0209025_1000083
307 Ga0209025_1002468
308 Ga0209564_1000125
309 Ga0209564_1000364
310 Ga0209564_1017087
311 Ga0209758_1000090
312 Ga0209758_1000291
313 Ga0209758_1000621
314 Ga0209758_1003404
315 Ga0209758_1010885
316 Ga0209050_1005792
317 Ga0209256_1005980
318 Ga0209256_1006462
319 Ga0207426_1000047
320 Ga0207426_1000173
321 Ga0207426_1001122
322 Ga0209051_1000778
323 Ga0209051_1001751
324 Ga0209051_1031918
325 Ga0209257_1004000
326 Ga0207650_10001272
327 Ga0268266_10005125
328 Ga0307515_10001512
329 Ga0307515_10026686
330 Ga0307513_10035158
331 Ga0307513_10057052
332 Ga0395905_0001069
333 Ga0439465_0008598
334 Ga0439465_0010064
335 Ga0451839_0565997
336 Ga0495638_0000377
337 Ga0495650_0012229
338 Ga0495605_0000579
339 Ga0495583_0007495
340 Ga0495606_0001683
341 Ga0495606_0008610
342 Ga0495606_0030273
343 Ga0495610_0001302
344 Ga0495620_0042826
345 Ga0495631_0005527
346 Ga0495632_0002151
347 Ga0495643_0002831
348 Ga0495643_0015176
349 Ga0495643_0034008
350 Ga0495643_0038008
351 Ga0495611_0001561
352 Ga0495625_0003354
353 Ga0495625_0021156
354 Ga0495625_0042728
355 Ga0495588_0005620
356 Ga0495636_0023431
357 Ga0495672_0012299
358 Ga0495681_0001265
359 Ga0495686_0000685
360 Ga0495686_0002205
361 Ga0495686_0013255
362 Ga0495686_0054556
363 Ga0496116_0000061
364 Ga0496116_0001128
365 Ga0496116_0004101
366 Ga0496116_0010340
367 Ga0496116_0011924
368 Ga0496116_0016534
369 Ga0496116_0074320
370 Ga0496116_0096557
371 Ga0496117_0000002
372 Ga0496117_0004655
373 Ga0496117_0084253
374 Ga0496118_0000501
375 Ga0496118_0085657
376 Ga0496120_0000093
377 Ga0496120_0012370
378 Ga0496120_0048310
379 Ga0496121_0000005
380 Ga0496121_0007947
381 Ga0496121_0010985
382 Ga0496121_0011657
383 Ga0496121_0014326
384 Ga0496121_0064965
385 Ga0496122_0000004
386 Ga0496122_0005799
387 Ga0496122_0005804
388 Ga0496122_0007095
389 Ga0496122_0080709
390 Ga0496123_0000007
391 Ga0496123_0004709
392 Ga0496123_0005666
393 Ga0496123_0063686
394 Ga0496124_0000091
395 Ga0496124_0003535
396 Ga0496124_0003584
397 Ga0496124_0031465
398 Ga0496124_0056054
399 Ga0496124_0100853
400 Ga0496125_0000163
401 Ga0496125_0006805
402 Ga0496125_0025450
403 Ga0496126_0002606
404 Ga0496126_0007184
405 Ga0496126_0122549
406 Ga0501034_0096782
407 Ga0501038_0013281
408 Ga0501080_0020777
409 Ga0501044_0098685
410 nmdc:mga03n38_15318_c1
411 nmdc:mga0yw44_22950_c1
412 nmdc:mga06z11_26445_c2
413 Ga0500557_000198
414 Ga0500594_0000868
415 Ga0500561_0000046
416 Ga0500616_0000232
417 Ga0500616_0000526
418 Ga0500622_0000237
419 Ga0500624_000937
420 Ga0500634_0002213
421 Ga0500636_0000009
422 Ga0500636_0000262
423 2585403331
424 2510843055
425 2511172298
426 2511187145
427 2511200146
428 2513869720
429 2524460160
430 2554248686
431 2559295774
432 2561467187
433 2585167669
434 2585202572
435 2585224876
436 2585227709
437 2585257720
438 2585265921
439 2585390112
440 2585547432
441 2585823628
442 2585845247
443 2585998239
444 2586002815
445 2643812399
446 2643854349
447 2644006312
448 2644208599
449 2644241772
450 2644300951
451 2644493907
452 2644523259
453 2644652129
454 2644659173
455 2738800542
456 2776915840
457 2793282488
458 2793353619
459 2808987492
460 2819243543
461 2842288876
462 2842298614
463 2842359519
464 2842406457
465 2842413116
466 2842419759
467 2842510643
468 2852391105
469 2854901022
470 2854918076
471 2899804964
472 2899848968
473 2919168738
474 2919172678
475 2923558873
476 2926762375
477 2929143188
478 2978971429
479 2979092355
480 2979100255
481 2984588574
482 2989781460
483 3003930594
484 3005455456
485 650740985
486 8005248078
487 8005660935
488 8018178547
489 8024489272
490 8046773310
491 8054465415
492 8055435512
493 8056386937
494 8057580959

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ixg-assembly2.cif.gz_B crystal structure of native apo sh3bp5 (p41) 0.455 116 358
6ixg-assembly2.cif.gz_B crystal structure of native apo sh3bp5 (p41) 0.434 116 358
6ixg-assembly1.cif.gz_A crystal structure of native apo sh3bp5 (p41) 0.4208 116 358
6ek8-assembly1.cif.gz_A yaxb from yersinia enterocolitica 0.4086 183 447
6ixe-assembly1.cif.gz_A crystal structure of semet apo sh3bp5 (i41) 0.4023 116 358
ID Description Score Start End Superfamily
af_Q66H41_179_375_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.4162 109 312 1.20.1270.60
af_Q66H41_179_375_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.4101 109 312 1.20.1270.60
af_Q9CY18_179_375_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.3889 109 312 1.20.1270.60
af_O60239_39_269_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.3884 112 358 1.20.1270.60
af_Q9CY18_179_375_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.3821 109 312 1.20.1270.60
ID Description Score Start End GO Terms
AF-A0A1H8R489-F1-model_v4 Uncharacterized protein 0.8192 1 339
AF-A0A4Z1Q656-F1-model_v4 deleted 0.7735 10 484
AF-A0A4Z1Q656-F1-model_v4 deleted 0.7181 10 484
AF-A0A1H8R489-F1-model_v4 Uncharacterized protein 0.7149 1 339
AF-A0A560KZV9-F1-model_v4 Methyl-accepting chemotaxis protein 0.7133 30 514

Map