F359874

General Info

Members Datasets Scaffolds Average Seq Length
248 155 496 459

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10053724|Ga0157370_100537243
Length 521
Sequence LRAELNRRPNRPDRTGTPFPGRTIPPDRTIAHAHTAHAGRPDNSTRRITMALRLLKITLVSLFVLLLAAVIWTGSIGKNLFRTATGSVSRSLCTSAFLARLDPQQTFTEEQLPLMRGIGWAIHYEVDRSRREVRSSVLGGFAARAVYREGLGCLLMQGDGAVPEAAGFQPDPIASTWPADMVEPADPAIRRALDRAFAEPDPAHPRLTKAVVVLHDGQLIAERYAPGYGPDTPIWAHSISKSITSALIGILVRQGKLQLEQPAPIAAWRSPADEHHAITVDQLLRMDSGLPFDETDGALNAMTRMLYLEHDMAGYAAKTPLVHPPGTAWGYSNLGYVLLSRLVRDAAGGSAVDVERLARRELFAPLGMRNTVIETDTTGTPVGASNVYASARDLARFGQLYLDDGVVDGRRLLPAGWVDYSRSQTLDTGYGAGFWTNLVNKGHVPVWNAPWGMPQLPKDMYYARGAFGQYVVIVPSEHLVVVRMGISLYYGDDTGDLVAAVIANLHRQAAPAPPDDAAILR

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
9 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
12 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
13 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
14 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
15 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
44 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
45 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
53 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
54 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
55 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
80 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
81 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
82 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
83 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
84 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
87 3300044663 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA2E_TR Metagenome Unclassified
88 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
89 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
90 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
91 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
92 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
93 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
94 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
95 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
96 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
101 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
102 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
103 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
104 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
105 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
106 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
107 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
108 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
109 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
114 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
115 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
116 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
136 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
137 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
138 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
140 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
141 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
142 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
143 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
144 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
145 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
146 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
147 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
148 2919404418 Luteibacter sp. 3190 Isolate Unclassified
149 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
150 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
151 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
152 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
153 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
154 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
155 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.94
Metatranscriptomes 1.61
Isolates 6.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.34
Nodule 3.23
Rhizoplane 1.21
Rhizosphere 66.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10053724 3300013104 Bacteria 3841
2 JGI24740J21852_10007871 3300001979 Bacteria 4299
3 JGI24739J22299_10000022 3300001989 Bacteria 45280
4 JGI24737J22298_10000260 3300001990 Bacteria 17513
5 JGI25156J39149_1002094 3300002705 Bacteria 7553
6 JGI25156J39149_1002338 3300002705 Bacteria 6909
7 JGI25162J39368_1001101 3300002737 Bacteria 16398
8 JGI25154J39366_1004712 3300002738 Bacteria 2356
9 JGI25157J39369_1000567 3300002741 Bacteria 22090
10 JGI25157J39369_1001668 3300002741 Bacteria 7553
11 JGI25164J39214_1000163 3300002772 Bacteria 63006
12 JGI25165J46597_1000326 3300003214 Bacteria 57016
13 Ga0006562J51391_1080725 3300003578 Bacteria 4050
14 Ga0006562J51391_1080727 3300003578 Bacteria 3100
15 Ga0006562J51391_1125941 3300003578 Bacteria 2052
16 Ga0055527_1000119 3300003760 Bacteria 56771
17 Ga0055535_1000147 3300003761 Bacteria 74557
18 Ga0055535_1000904 3300003761 Bacteria 20158
19 Ga0055542_1000057 3300003762 Bacteria 162955
20 Ga0055542_1000064 3300003762 Bacteria 159853
21 Ga0055542_1000101 3300003762 Bacteria 116277
22 Ga0055529_1000072 3300003763 Bacteria 159853
23 Ga0055529_1000105 3300003763 Bacteria 123670
24 Ga0065165_1000001 3300005262 Bacteria 494087
25 Ga0065165_1002406 3300005262 Bacteria 15970
26 Ga0070680_100054349 3300005336 Bacteria 3270
27 Ga0070682_100009987 3300005337 Bacteria 5376
28 Ga0070682_100034682 3300005337 Bacteria 3075
29 Ga0070661_100003860 3300005344 Bacteria 10314
30 Ga0070659_100007618 3300005366 Bacteria 7869
31 Ga0070714_100000650 3300005435 Bacteria 24670
32 Ga0070714_100013440 3300005435 Bacteria 6560
33 Ga0070714_100029381 3300005435 Bacteria 4570
34 Ga0070713_100002503 3300005436 Bacteria 12005
35 Ga0070662_100004147 3300005457 Bacteria 9119
36 Ga0070685_10008623 3300005466 Bacteria 5246
37 Ga0070707_100020476 3300005468 Bacteria 6240
38 Ga0070698_100025240 3300005471 Bacteria 6192
39 Ga0070684_100014175 3300005535 Bacteria 6448
40 Ga0070696_100065167 3300005546 Bacteria 2554
41 Ga0068855_100003571 3300005563 Bacteria 19022
42 Ga0068855_100007217 3300005563 Bacteria 13484
43 Ga0068855_100100042 3300005563 Bacteria 3339
44 Ga0068857_100000491 3300005577 Bacteria 28321
45 Ga0068857_100090305 3300005577 Bacteria 2741
46 Ga0068854_100000046 3300005578 Bacteria 91434
47 Ga0068854_100001951 3300005578 Bacteria 12595
48 Ga0068856_100002209 3300005614 Bacteria 20174
49 Ga0068851_10000867 3300005834 Bacteria 13033
50 Ga0075436_100073666 3300006914 Bacteria 2364
51 Ga0075435_100054402 3300007076 Bacteria 3230
52 Ga0105240_10006617 3300009093 Bacteria 17012
53 Ga0105240_10029366 3300009093 Bacteria 7164
54 Ga0105240_10191020 3300009093 Bacteria 2408
55 Ga0105247_10064249 3300009101 Bacteria 2280
56 Ga0105237_10000016 3300009545 Bacteria 256506
57 Ga0105237_10015638 3300009545 Bacteria 7888
58 Ga0105237_10167205 3300009545 Bacteria 2198
59 Ga0105237_10186810 3300009545 Bacteria 2072
60 Ga0105238_10061853 3300009551 Bacteria 3746
61 Ga0105239_10024159 3300010375 Bacteria 6694
62 Ga0157373_10029342 3300013100 Bacteria 3962
63 Ga0157370_10107432 3300013104 Bacteria 2610
64 Ga0157372_10004340 3300013307 Bacteria 15147
65 Ga0157372_10095224 3300013307 Bacteria 3392
66 Ga0182006_1000005 3300015261 Bacteria 621201
67 Ga0182007_10002573 3300015262 Bacteria 8929
68 Ga0182007_10007401 3300015262 Bacteria 4607
69 Ga0209674_100111 3300025226 Bacteria 143058
70 Ga0209674_101630 3300025226 Bacteria 5620
71 Ga0209674_101669 3300025226 Bacteria 5524
72 Ga0209672_100008 3300025228 Bacteria 946876
73 Ga0209672_100113 3300025228 Bacteria 92025
74 Ga0209672_100269 3300025228 Bacteria 38347
75 Ga0207427_100075 3300025231 Bacteria 150143
76 Ga0209437_100319 3300025233 Bacteria 63021
77 Ga0209437_101006 3300025233 Bacteria 9793
78 Ga0209258_100004 3300025242 Bacteria 1376422
79 Ga0209258_100008 3300025242 Bacteria 1009355
80 Ga0209258_100144 3300025242 Bacteria 163814
81 Ga0209258_100198 3300025242 Bacteria 124013
82 Ga0209026_1000289 3300025250 Bacteria 56985
83 Ga0209026_1000405 3300025250 Bacteria 38212
84 Ga0209026_1002195 3300025250 Bacteria 7553
85 Ga0209026_1003894 3300025250 Bacteria 4697
86 Ga0209148_1000024 3300025254 Bacteria 669890
87 Ga0209148_1000041 3300025254 Bacteria 469323
88 Ga0209148_1000141 3300025254 Bacteria 163821
89 Ga0209148_1000170 3300025254 Bacteria 132641
90 Ga0209148_1003786 3300025254 Bacteria 3969
91 Ga0209759_1000164 3300025256 Bacteria 113141
92 Ga0209759_1000968 3300025256 Bacteria 20140
93 Ga0209759_1004047 3300025256 Bacteria 5610
94 Ga0209759_1006468 3300025256 Bacteria 3931
95 Ga0209129_1000720 3300025258 Bacteria 21371
96 Ga0209129_1000793 3300025258 Bacteria 19956
97 Ga0209233_1000210 3300025261 Bacteria 112384
98 Ga0209455_1000007 3300025272 Bacteria 1157983
99 Ga0209455_1000025 3300025272 Bacteria 670673
100 Ga0209455_1000338 3300025272 Bacteria 44594
101 Ga0209455_1013459 3300025272 Bacteria 1897
102 Ga0209758_1000290 3300025297 Bacteria 98878
103 Ga0209758_1022053 3300025297 Bacteria 2940
104 Ga0207656_10002711 3300025321 Bacteria 6009
105 Ga0207647_10006945 3300025904 Bacteria 8204
106 Ga0207647_10010039 3300025904 Bacteria 6699
107 Ga0207705_10008424 3300025909 Bacteria 7529
108 Ga0207707_10065653 3300025912 Bacteria 3161
109 Ga0207695_10000307 3300025913 Bacteria 118870
110 Ga0207695_10003762 3300025913 Bacteria 21057
111 Ga0207695_10011801 3300025913 Bacteria 10542
112 Ga0207671_10000013 3300025914 Bacteria 478458
113 Ga0207671_10001911 3300025914 Bacteria 23120
114 Ga0207657_10046282 3300025919 Bacteria 3812
115 Ga0207649_10064606 3300025920 Bacteria 2314
116 Ga0207700_10000795 3300025928 Bacteria 18225
117 Ga0207664_10000239 3300025929 Bacteria 41739
118 Ga0207664_10004850 3300025929 Bacteria 9147
119 Ga0207690_10000448 3300025932 Bacteria 26681
120 Ga0207690_10000586 3300025932 Bacteria 23543
121 Ga0207706_10025381 3300025933 Bacteria 5310
122 Ga0207661_10011600 3300025944 Bacteria 6392
123 Ga0207679_10155292 3300025945 Bacteria 1868
124 Ga0207667_10000040 3300025949 Bacteria 275827
125 Ga0207667_10000047 3300025949 Bacteria 240471
126 Ga0207667_10062904 3300025949 Bacteria 3879
127 Ga0207640_10000009 3300025981 Bacteria 283101
128 Ga0207702_10000438 3300026078 Bacteria 47495
129 Ga0207702_10001816 3300026078 Bacteria 21006
130 Ga0207702_10162690 3300026078 Bacteria 2039
131 Ga0207674_10000012 3300026116 Bacteria 193220
132 Ga0207674_10065375 3300026116 Bacteria 3666
133 Ga0395899_0000057 3300037312 Bacteria 214710
134 Ga0395899_0003016 3300037312 Bacteria 13442
135 Ga0395900_0000035 3300037418 Bacteria 254301
136 Ga0395900_0001866 3300037418 Bacteria 23992
137 Ga0395898_0000150 3300037466 Bacteria 181023
138 Ga0395898_0001301 3300037466 Bacteria 36458
139 Ga0395898_0005801 3300037466 Bacteria 13281
140 Ga0395898_0009868 3300037466 Bacteria 10010
141 Ga0395901_0025292 3300038443 Bacteria 6094
142 Ga0395901_0126631 3300038443 Bacteria 2684
143 Ga0439436_0000001 3300041404 Bacteria 299341
144 Ga0439465_0006780 3300041413 Bacteria 3638
145 Ga0451795_0984472 3300041456 Bacteria 2117
146 Ga0439437_001522 3300042000 Bacteria 2438
147 Ga0439449_0030846 3300042007 Bacteria 1998
148 Ga0450908_000182 3300042184 Bacteria 12859
149 Ga0466969_0004372 3300044656 Bacteria 7519
150 Ga0466972_0001412 3300044658 Bacteria 11640
151 Ga0466989_0041943 3300044663 Bacteria 2780
152 Ga0466982_0000008 3300044672 Bacteria 240089
153 Ga0466966_0010862 3300044684 Bacteria 6048
154 Ga0466966_0016761 3300044684 Bacteria 4840
155 Ga0466966_0039266 3300044684 Bacteria 3049
156 Ga0466961_0001836 3300044693 Bacteria 13184
157 Ga0466961_0005373 3300044693 Bacteria 8061
158 Ga0466961_0015886 3300044693 Bacteria 4831
159 Ga0466961_0059763 3300044693 Bacteria 2423
160 Ga0466964_0000829 3300044706 Bacteria 10115
161 Ga0466964_0050125 3300044706 Bacteria 1711
162 Ga0466971_0006033 3300044719 Bacteria 5274
163 Ga0466971_0022989 3300044719 Bacteria 2779
164 Ga0466971_0072622 3300044719 Bacteria 1563
165 Ga0466970_0005493 3300044765 Bacteria 6292
166 Ga0466970_0012524 3300044765 Bacteria 4339
167 Ga0466970_0043210 3300044765 Bacteria 2398
168 Ga0466957_0061777 3300044842 Bacteria 2300
169 Ga0466959_0014457 3300045049 Bacteria 5735
170 Ga0466959_0065953 3300045049 Bacteria 2626
171 Ga0466958_0007626 3300045836 Bacteria 5961
172 Ga0466958_0019336 3300045836 Bacteria 3965
173 Ga0466958_0027461 3300045836 Bacteria 3369
174 Ga0466958_0107879 3300045836 Bacteria 1737
175 Ga0466967_0031559 3300045976 Bacteria 4461
176 Ga0466967_0096721 3300045976 Bacteria 2694
177 Ga0495617_000016 3300046452 Bacteria 253600
178 Ga0495650_0060361 3300046471 Bacteria 1523
179 Ga0495584_0004400 3300046491 Bacteria 7587
180 Ga0495585_0036691 3300046492 Bacteria 2762
181 Ga0495607_0000010 3300046501 Bacteria 206525
182 Ga0495607_0001982 3300046501 Bacteria 17242
183 Ga0495583_0007900 3300046506 Bacteria 6597
184 Ga0495606_0000091 3300046507 Bacteria 153354
185 Ga0495606_0000150 3300046507 Bacteria 119726
186 Ga0495610_0000951 3300046512 Bacteria 26825
187 Ga0495616_0000001 3300046513 Bacteria 780061
188 Ga0495616_0009886 3300046513 Bacteria 5547
189 Ga0495620_0000131 3300046515 Bacteria 60856
190 Ga0495632_0026972 3300046519 Bacteria 3015
191 Ga0495609_0002626 3300046538 Bacteria 10916
192 Ga0495668_0005774 3300046616 Bacteria 8274
193 Ga0495625_0007493 3300046660 Bacteria 9486
194 Ga0495670_0010082 3300046691 Bacteria 4645
195 Ga0495670_0010728 3300046691 Bacteria 4502
196 Ga0495589_0000016 3300046794 Bacteria 209027
197 Ga0495660_0000116 3300046810 Bacteria 85798
198 Ga0495683_0001193 3300047323 Bacteria 17728
199 Ga0495673_0001814 3300047469 Bacteria 16138
200 Ga0495686_0000115 3300047472 Bacteria 166876
201 Ga0495686_0017245 3300047472 Bacteria 4869
202 Ga0496100_0001099 3300048903 Bacteria 13076
203 Ga0496101_0007760 3300048904 Bacteria 6973
204 Ga0496118_0004440 3300048921 Bacteria 16648
205 Ga0496121_0000905 3300048924 Bacteria 53422
206 Ga0496121_0009337 3300048924 Bacteria 11302
207 Ga0496121_0027783 3300048924 Bacteria 5285
208 Ga0496125_0000044 3300048928 Bacteria 296762
209 Ga0496126_0008072 3300048929 Bacteria 11404
210 Ga0495678_000475 3300049459 Bacteria 39998
211 Ga0501031_0072719 3300049568 Bacteria 2238
212 Ga0501033_0010579 3300049570 Bacteria 7073
213 Ga0501033_0037129 3300049570 Bacteria 3647
214 Ga0501033_0113482 3300049570 Bacteria 1970
215 Ga0501036_0263723 3300049572 Bacteria 1443
216 Ga0501037_0102847 3300049573 Bacteria 2060
217 Ga0501043_0050036 3300049579 Bacteria 3285
218 Ga0501047_0010880 3300049581 Bacteria 8602
219 Ga0501047_0058239 3300049581 Bacteria 3732
220 Ga0501047_0122994 3300049581 Bacteria 2476
221 Ga0501048_0020421 3300049582 Bacteria 4854
222 Ga0501070_0192870 3300049586 Bacteria 1674
223 Ga0501035_0026549 3300049822 Bacteria 5297
224 Ga0501035_0063333 3300049822 Bacteria 3289
225 Ga0501044_0012365 3300049823 Bacteria 9239
226 Ga0501044_0069727 3300049823 Bacteria 3578
227 Ga0501044_0070741 3300049823 Bacteria 3548
228 nmdc:mga07m45_37980_c1 3300050496 Bacteria 2686
229 Ga0500643_000002 3300053087 Bacteria 1277657
230 Ga0500555_000288 3300053103 Bacteria 21733
231 Ga0587067_003942 3300059640 Bacteria 1894
232 Ga0466962_0002663 3300061719 Bacteria 8492
233 2513639728 2513237094 Bacteria 8789602
234 2513873731 2513237139 Bacteria 8737671
235 2595446240 2593339238 Bacteria 4182970
236 2595452314 2593339239 Bacteria 4124669
237 2617350909 2617270735 Bacteria 9163226
238 2721027179 2718218334 Bacteria 4765486
239 2842919128 2842918807 Bacteria 4289178
240 2895396933 2895395659 Bacteria 3983269
241 2919405531 2919404418 Bacteria 4232372
242 2919426468 2919425241 Bacteria 8055701
243 2939614263 2939611941 Bacteria 3892017
244 3005718105 3005718088 Bacteria 8283608
245 8016549465 8016548790 Bacteria 8155074
246 8016557888 8016557553 Bacteria 8154380
247 8016595906 8016595262 Bacteria 8149947
248 8019530819 8019530166 Bacteria 8155624
249 Ga0157370_10053724
250 JGI24740J21852_10007871
251 JGI24739J22299_10000022
252 JGI24737J22298_10000260
253 JGI25156J39149_1002094
254 JGI25156J39149_1002338
255 JGI25162J39368_1001101
256 JGI25154J39366_1004712
257 JGI25157J39369_1000567
258 JGI25157J39369_1001668
259 JGI25164J39214_1000163
260 JGI25165J46597_1000326
261 Ga0006562J51391_1080725
262 Ga0006562J51391_1080727
263 Ga0006562J51391_1125941
264 Ga0055527_1000119
265 Ga0055535_1000147
266 Ga0055535_1000904
267 Ga0055542_1000057
268 Ga0055542_1000064
269 Ga0055542_1000101
270 Ga0055529_1000072
271 Ga0055529_1000105
272 Ga0065165_1000001
273 Ga0065165_1002406
274 Ga0070680_100054349
275 Ga0070682_100009987
276 Ga0070682_100034682
277 Ga0070661_100003860
278 Ga0070659_100007618
279 Ga0070714_100000650
280 Ga0070714_100013440
281 Ga0070714_100029381
282 Ga0070713_100002503
283 Ga0070662_100004147
284 Ga0070685_10008623
285 Ga0070707_100020476
286 Ga0070698_100025240
287 Ga0070684_100014175
288 Ga0070696_100065167
289 Ga0068855_100003571
290 Ga0068855_100007217
291 Ga0068855_100100042
292 Ga0068857_100000491
293 Ga0068857_100090305
294 Ga0068854_100000046
295 Ga0068854_100001951
296 Ga0068856_100002209
297 Ga0068851_10000867
298 Ga0075436_100073666
299 Ga0075435_100054402
300 Ga0105240_10006617
301 Ga0105240_10029366
302 Ga0105240_10191020
303 Ga0105247_10064249
304 Ga0105237_10000016
305 Ga0105237_10015638
306 Ga0105237_10167205
307 Ga0105237_10186810
308 Ga0105238_10061853
309 Ga0105239_10024159
310 Ga0157373_10029342
311 Ga0157370_10107432
312 Ga0157372_10004340
313 Ga0157372_10095224
314 Ga0182006_1000005
315 Ga0182007_10002573
316 Ga0182007_10007401
317 Ga0209674_100111
318 Ga0209674_101630
319 Ga0209674_101669
320 Ga0209672_100008
321 Ga0209672_100113
322 Ga0209672_100269
323 Ga0207427_100075
324 Ga0209437_100319
325 Ga0209437_101006
326 Ga0209258_100004
327 Ga0209258_100008
328 Ga0209258_100144
329 Ga0209258_100198
330 Ga0209026_1000289
331 Ga0209026_1000405
332 Ga0209026_1002195
333 Ga0209026_1003894
334 Ga0209148_1000024
335 Ga0209148_1000041
336 Ga0209148_1000141
337 Ga0209148_1000170
338 Ga0209148_1003786
339 Ga0209759_1000164
340 Ga0209759_1000968
341 Ga0209759_1004047
342 Ga0209759_1006468
343 Ga0209129_1000720
344 Ga0209129_1000793
345 Ga0209233_1000210
346 Ga0209455_1000007
347 Ga0209455_1000025
348 Ga0209455_1000338
349 Ga0209455_1013459
350 Ga0209758_1000290
351 Ga0209758_1022053
352 Ga0207656_10002711
353 Ga0207647_10006945
354 Ga0207647_10010039
355 Ga0207705_10008424
356 Ga0207707_10065653
357 Ga0207695_10000307
358 Ga0207695_10003762
359 Ga0207695_10011801
360 Ga0207671_10000013
361 Ga0207671_10001911
362 Ga0207657_10046282
363 Ga0207649_10064606
364 Ga0207700_10000795
365 Ga0207664_10000239
366 Ga0207664_10004850
367 Ga0207690_10000448
368 Ga0207690_10000586
369 Ga0207706_10025381
370 Ga0207661_10011600
371 Ga0207679_10155292
372 Ga0207667_10000040
373 Ga0207667_10000047
374 Ga0207667_10062904
375 Ga0207640_10000009
376 Ga0207702_10000438
377 Ga0207702_10001816
378 Ga0207702_10162690
379 Ga0207674_10000012
380 Ga0207674_10065375
381 Ga0395899_0000057
382 Ga0395899_0003016
383 Ga0395900_0000035
384 Ga0395900_0001866
385 Ga0395898_0000150
386 Ga0395898_0001301
387 Ga0395898_0005801
388 Ga0395898_0009868
389 Ga0395901_0025292
390 Ga0395901_0126631
391 Ga0439436_0000001
392 Ga0439465_0006780
393 Ga0451795_0984472
394 Ga0439437_001522
395 Ga0439449_0030846
396 Ga0450908_000182
397 Ga0466969_0004372
398 Ga0466972_0001412
399 Ga0466989_0041943
400 Ga0466982_0000008
401 Ga0466966_0010862
402 Ga0466966_0016761
403 Ga0466966_0039266
404 Ga0466961_0001836
405 Ga0466961_0005373
406 Ga0466961_0015886
407 Ga0466961_0059763
408 Ga0466964_0000829
409 Ga0466964_0050125
410 Ga0466971_0006033
411 Ga0466971_0022989
412 Ga0466971_0072622
413 Ga0466970_0005493
414 Ga0466970_0012524
415 Ga0466970_0043210
416 Ga0466957_0061777
417 Ga0466959_0014457
418 Ga0466959_0065953
419 Ga0466958_0007626
420 Ga0466958_0019336
421 Ga0466958_0027461
422 Ga0466958_0107879
423 Ga0466967_0031559
424 Ga0466967_0096721
425 Ga0495617_000016
426 Ga0495650_0060361
427 Ga0495584_0004400
428 Ga0495585_0036691
429 Ga0495607_0000010
430 Ga0495607_0001982
431 Ga0495583_0007900
432 Ga0495606_0000091
433 Ga0495606_0000150
434 Ga0495610_0000951
435 Ga0495616_0000001
436 Ga0495616_0009886
437 Ga0495620_0000131
438 Ga0495632_0026972
439 Ga0495609_0002626
440 Ga0495668_0005774
441 Ga0495625_0007493
442 Ga0495670_0010082
443 Ga0495670_0010728
444 Ga0495589_0000016
445 Ga0495660_0000116
446 Ga0495683_0001193
447 Ga0495673_0001814
448 Ga0495686_0000115
449 Ga0495686_0017245
450 Ga0496100_0001099
451 Ga0496101_0007760
452 Ga0496118_0004440
453 Ga0496121_0000905
454 Ga0496121_0009337
455 Ga0496121_0027783
456 Ga0496125_0000044
457 Ga0496126_0008072
458 Ga0495678_000475
459 Ga0501031_0072719
460 Ga0501033_0010579
461 Ga0501033_0037129
462 Ga0501033_0113482
463 Ga0501036_0263723
464 Ga0501037_0102847
465 Ga0501043_0050036
466 Ga0501047_0010880
467 Ga0501047_0058239
468 Ga0501047_0122994
469 Ga0501048_0020421
470 Ga0501070_0192870
471 Ga0501035_0026549
472 Ga0501035_0063333
473 Ga0501044_0012365
474 Ga0501044_0069727
475 Ga0501044_0070741
476 nmdc:mga07m45_37980_c1
477 Ga0500643_000002
478 Ga0500555_000288
479 Ga0587067_003942
480 Ga0466962_0002663
481 2513639728
482 2513873731
483 2595446240
484 2595452314
485 2617350909
486 2721027179
487 2842919128
488 2895396933
489 2919405531
490 2919426468
491 2939614263
492 3005718105
493 8016549465
494 8016557888
495 8016595906
496 8019530819

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00144

Beta-lactamase

Beta-lactamase

193

520

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dc1-assembly1.cif.gz_A structural and biochemical characterization of l. interrogans lsa45 reveals a penicillin-binding protein with esterase activity 0.8623 139 454
2zm7-assembly1.cif.gz_A structure of 6-aminohexanoate-dimer hydrolase, s112a/g181d mutant complexed with 6-aminohexanoate-dimer 0.7797 138 457
6kjq-assembly1.cif.gz_A functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors 0.7775 139 449
6kjr-assembly1.cif.gz_A functional and structural insights into the unusual oxyanion hole-like geometry in macrolactin acyltransferase selective for dicarboxylic acyl donors 0.7745 140 449
7pp8-assembly1.cif.gz_A structure of ester-hydrolase eh7 from metagenome of marine sediments at milazzo harbor (sicily, italy) complexed with a derivative of methyl 4-nitrophenyl hexylphosphonate 0.7699 140 453
ID Description Score Start End Superfamily
af_Q9VR38_111_527_3.30.450.70 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.7661 139 183 3.30.450.70
af_P71981_7_386_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7608 118 452 3.40.710.10
af_P9WLZ3_5_376_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.757 155 434 3.40.710.10
3i7jB00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7521 143 456 3.40.710.10
af_P77619_23_410_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7466 131 439 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A0F3KAF1-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9887 28 457
AF-A0A7U1E4U4-F1-model_v4 deleted 0.9708 264 455
AF-A0A2M8J108-F1-model_v4 Serine hydrolase 0.9654 140 450 GO:0016787
AF-A0A316IJ58-F1-model_v4 Beta-lactamase 0.9636 204 389
AF-A0A0F3KAF1-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9598 28 457

Map