F360071

General Info

Members Datasets Scaffolds Average Seq Length
248 180 244 335

Family's Representative Sequence

Representative Sequence 3300038726|Ga0400490_54643|Ga0400490_54643_41_1114
Length 357
Sequence MNDPYGHDRYSFPWEAEEGQMRKKALITGITGMVGSHLADFLLANTDWDIYGMCRWRSPMDNVEHLLERANINDRVFFLYGDLMDHVSLQNVVVESQPDFVFHLAAQSYPTTSFTSPLQTLDTNLLGTERLLEVLRSCEKIDPVIHVCSSSEVFGRVARDQLPINEACSFHPASPYAISKVGTDLIGRFHAEAYQQKVVVTRMFTHTGPRRGDVFAESSFAKQIALIERKMMPPVVRTGNLQSMRTWSDVRDAVRAYYTLVTVNPIPGEYYNIGGTFSCLVGEMLEYLISLSTVSDIRIETEQSRIRPLDADLQIPDTIKFKNHTGWEPEIPFESTMQDLLNYWRDQINNGKRFLSR

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
3 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
4 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
5 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
6 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
7 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
8 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
9 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
10 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
14 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
22 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
23 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
50 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
51 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
61 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
76 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
77 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
112 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
113 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
114 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
115 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
116 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
124 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
125 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
126 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
127 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
128 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
129 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
132 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
139 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
140 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
141 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
142 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
143 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
144 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
145 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
146 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
147 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
148 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
149 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
150 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
151 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
152 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
153 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
154 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
155 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
156 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
169 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
170 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
173 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
178 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
179 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
180 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.39
Metatranscriptomes 0
Isolates 1.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.92
Nodule 1.21
Rhizoplane 1.21
Rhizosphere 75.4
Stem 0
Stem Tuber 0
Unclassified 7.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_1777323 2162886011 Bacteria 1327
2 JGI24740J21852_10002319 3300001979 Bacteria 8655
3 JGI24740J21852_10019254 3300001979 Bacteria 2408
4 JGI24739J22299_10000996 3300001989 Bacteria 10556
5 JGI25158J39367_1000046 3300002739 Bacteria 27859
6 JGI25159J45721_1000145 3300002987 Bacteria 32623
7 JGI25406J46586_10018212 3300003203 Unclassified 2890
8 rootL2_10076802 3300003322 Bacteria 11384
9 rootH1_10041227 3300003323 Bacteria 13265
10 JGI25160J50197_1000327 3300003354 Bacteria 32616
11 JGI25161J50226_1000245 3300003374 Bacteria 32623
12 Ga0055524_1000007 3300003775 Bacteria 298766
13 Ga0055543_1000325 3300004625 Bacteria 32876
14 Ga0065165_1001062 3300005262 Bacteria 32876
15 Ga0065712_10070349 3300005290 Bacteria 6087
16 Ga0065712_10116790 3300005290 Bacteria 1730
17 Ga0070658_10032114 3300005327 Bacteria 4221
18 Ga0070680_100036577 3300005336 Bacteria 3966
19 Ga0070689_100073145 3300005340 Bacteria 2680
20 Ga0070691_10015845 3300005341 Bacteria 3465
21 Ga0070661_100193299 3300005344 Bacteria 1552
22 Ga0070714_100014549 3300005435 Bacteria 6324
23 Ga0070713_100130740 3300005436 Bacteria 2214
24 Ga0070711_100026557 3300005439 Unclassified 3795
25 Ga0070694_100028751 3300005444 Bacteria 3620
26 Ga0070708_100019429 3300005445 Bacteria 5708
27 Ga0070681_10000638 3300005458 Bacteria 28855
28 Ga0070681_10002947 3300005458 Bacteria 15782
29 Ga0070706_100080668 3300005467 Bacteria 3013
30 Ga0070707_100057504 3300005468 Bacteria 3731
31 Ga0070698_100026144 3300005471 Bacteria 6078
32 Ga0070698_100153018 3300005471 Unclassified 2253
33 Ga0070679_100000846 3300005530 Bacteria 26712
34 Ga0070679_100420978 3300005530 Bacteria 1281
35 Ga0070684_100017691 3300005535 Bacteria 5858
36 Ga0070697_100008957 3300005536 Bacteria 7820
37 Ga0070697_100016804 3300005536 Bacteria 5755
38 Ga0070695_100011351 3300005545 Bacteria 5330
39 Ga0070696_100233639 3300005546 Unclassified 1384
40 Ga0070665_100078824 3300005548 Bacteria 3301
41 Ga0070665_100258179 3300005548 Bacteria 1744
42 Ga0068855_100017710 3300005563 Bacteria 8566
43 Ga0068855_100028631 3300005563 Bacteria 6665
44 Ga0068855_100029456 3300005563 Bacteria 6562
45 Ga0068855_100080557 3300005563 Bacteria 3775
46 Ga0068855_100100826 3300005563 Bacteria 3324
47 Ga0070664_100012910 3300005564 Bacteria 6796
48 Ga0068856_100011394 3300005614 Bacteria 8626
49 Ga0068852_100007662 3300005616 Bacteria 7896
50 Ga0068852_100014353 3300005616 Bacteria 6095
51 Ga0068859_100345094 3300005617 Bacteria 1583
52 Ga0068864_100001350 3300005618 Bacteria 20398
53 Ga0068870_10105917 3300005840 Bacteria 1598
54 Ga0068858_100002407 3300005842 Bacteria 18920
55 Ga0081455_10000863 3300005937 Bacteria 39072
56 Ga0081455_10004269 3300005937 Bacteria 16102
57 Ga0081539_10009371 3300005985 Bacteria 8201
58 Ga0075365_10001943 3300006038 Bacteria 9759
59 Ga0075365_10163398 3300006038 Bacteria 1552
60 Ga0075365_10176759 3300006038 Bacteria 1491
61 Ga0075363_100075826 3300006048 Bacteria 1833
62 Ga0075364_10093878 3300006051 Bacteria 1992
63 Ga0075362_10004343 3300006177 Bacteria 5080
64 Ga0075367_10102342 3300006178 Bacteria 1752
65 Ga0075369_10001199 3300006186 Bacteria 8784
66 Ga0075366_10046406 3300006195 Bacteria 2574
67 Ga0075366_10100281 3300006195 Bacteria 1737
68 Ga0097621_100178121 3300006237 Bacteria 1836
69 Ga0075370_10219197 3300006353 Bacteria 1124
70 Ga0075431_100196148 3300006847 Bacteria 2067
71 Ga0097620_100345093 3300006931 Bacteria 1583
72 Ga0099826_10000053 3300006948 Bacteria 72398
73 Ga0099795_10032038 3300007788 Bacteria 1815
74 Ga0105240_10026272 3300009093 Bacteria 7638
75 Ga0105240_10071478 3300009093 Bacteria 4291
76 Ga0105240_10125393 3300009093 Bacteria 3086
77 Ga0105240_10348801 3300009093 Bacteria 1680
78 Ga0111539_10321039 3300009094 Bacteria 1802
79 Ga0105241_10194121 3300009174 Bacteria 1692
80 Ga0105248_10004033 3300009177 Bacteria 16224
81 Ga0105248_10015434 3300009177 Bacteria 8420
82 Ga0105238_10053402 3300009551 Bacteria 4061
83 Ga0105238_10252090 3300009551 Bacteria 1744
84 Ga0105239_10010021 3300010375 Bacteria 10629
85 Ga0105239_10050015 3300010375 Bacteria 4584
86 Ga0105239_10152510 3300010375 Bacteria 2579
87 Ga0157373_10011211 3300013100 Bacteria 6595
88 Ga0157370_10009185 3300013104 Bacteria 10600
89 Ga0157370_10421668 3300013104 Bacteria 1228
90 Ga0157369_10004845 3300013105 Bacteria 15794
91 Ga0157369_10010359 3300013105 Bacteria 10629
92 Ga0157374_10114021 3300013296 Bacteria 2602
93 Ga0157372_10008973 3300013307 Bacteria 10629
94 Ga0163163_10013214 3300014325 Bacteria 7547
95 Ga0157379_10201408 3300014968 Bacteria 1800
96 Ga0213871_10000220 3300021441 Bacteria 6731
97 Ga0209436_100135 3300025208 Bacteria 36415
98 Ga0209565_1004980 3300025263 Bacteria 3936
99 Ga0209130_1000574 3300025284 Bacteria 35904
100 Ga0209675_1000999 3300025291 Bacteria 17802
101 Ga0209050_1001946 3300025298 Bacteria 19596
102 Ga0209256_1000005 3300025299 Bacteria 1315082
103 Ga0207426_1000657 3300025302 Bacteria 42328
104 Ga0207647_10153780 3300025904 Bacteria 1344
105 Ga0207705_10043975 3300025909 Bacteria 3209
106 Ga0207684_10023603 3300025910 Bacteria 5252
107 Ga0207707_10002929 3300025912 Bacteria 15219
108 Ga0207707_10006658 3300025912 Bacteria 10076
109 Ga0207695_10030906 3300025913 Bacteria 5888
110 Ga0207695_10308244 3300025913 Bacteria 1473
111 Ga0207660_10017805 3300025917 Bacteria 4727
112 Ga0207660_10033717 3300025917 Bacteria 3544
113 Ga0207657_10106986 3300025919 Bacteria 2314
114 Ga0207649_10011950 3300025920 Bacteria 4803
115 Ga0207652_10002547 3300025921 Bacteria 15302
116 Ga0207652_10286239 3300025921 Bacteria 1487
117 Ga0207646_10015389 3300025922 Bacteria 7226
118 Ga0207694_10116978 3300025924 Bacteria 2125
119 Ga0207659_10066285 3300025926 Bacteria 2620
120 Ga0207706_10185797 3300025933 Bacteria 1825
121 Ga0207711_10008087 3300025941 Bacteria 8802
122 Ga0207711_10013985 3300025941 Bacteria 6666
123 Ga0207661_10200414 3300025944 Bacteria 1754
124 Ga0207679_10160253 3300025945 Bacteria 1841
125 Ga0207667_10015802 3300025949 Bacteria 8555
126 Ga0207667_10015872 3300025949 Bacteria 8530
127 Ga0207667_10049443 3300025949 Bacteria 4440
128 Ga0207658_10325422 3300025986 Bacteria 1332
129 Ga0207703_10009957 3300026035 Bacteria 7457
130 Ga0207702_10144996 3300026078 Bacteria 2153
131 Ga0207641_10100880 3300026088 Bacteria 2543
132 Ga0207641_10344910 3300026088 Bacteria 1418
133 Ga0207676_10005090 3300026095 Bacteria 9303
134 Ga0207674_10149548 3300026116 Bacteria 2292
135 Ga0207674_10178441 3300026116 Unclassified 2076
136 Ga0207698_10004583 3300026142 Bacteria 8436
137 Ga0207698_10022275 3300026142 Bacteria 4398
138 Ga0209969_1013395 3300027360 Bacteria 1187
139 Ga0209282_1005951 3300027666 Bacteria 7543
140 Ga0207428_10180061 3300027907 Bacteria 1597
141 Ga0268266_10068493 3300028379 Bacteria 3073
142 Ga0268266_10220158 3300028379 Bacteria 1744
143 Ga0265336_10045504 3300028666 Unclassified 1334
144 Ga0265338_10129475 3300028800 Bacteria 1996
145 Ga0265324_10001459 3300029957 Bacteria 13457
146 Ga0265325_10010948 3300031241 Bacteria 5224
147 Ga0265329_10018943 3300031242 Bacteria 2346
148 Ga0265331_10000484 3300031250 Bacteria 38079
149 Ga0265331_10039405 3300031250 Bacteria 2304
150 Ga0265327_10001344 3300031251 Bacteria 31888
151 Ga0265327_10002274 3300031251 Bacteria 20657
152 Ga0265316_10000891 3300031344 Bacteria 32716
153 Ga0265316_10037252 3300031344 Bacteria 3927
154 Ga0307408_100001644 3300031548 Bacteria 16490
155 Ga0265314_10054241 3300031711 Bacteria 2775
156 Ga0265342_10000026 3300031712 Bacteria 166610
157 Ga0307416_100078287 3300032002 Bacteria 2781
158 Ga0373940_0048508 3300035088 Bacteria 1187
159 Ga0373936_0027532 3300035113 Bacteria 2230
160 Ga0373939_0051018 3300035114 Bacteria 1285
161 Ga0373955_0077578 3300035172 Bacteria 1871
162 Ga0373942_0011023 3300035207 Bacteria 2136
163 Ga0373931_0056453 3300035691 Bacteria 2104
164 Ga0373931_0184399 3300035691 Unclassified 1238
165 Ga0373927_0063621 3300035695 Bacteria 2386
166 Ga0373937_0047575 3300036401 Bacteria 3925
167 Ga0316582_0114039 3300036647 Bacteria 1802
168 Ga0373925_0102619 3300037068 Bacteria 2201
169 Ga0395899_0032297 3300037312 Bacteria 3932
170 Ga0395900_0004821 3300037418 Bacteria 14209
171 Ga0395900_0069394 3300037418 Unclassified 3622
172 Ga0395900_0113396 3300037418 Bacteria 2782
173 Ga0395900_0176731 3300037418 Bacteria 2171
174 Ga0395900_0309737 3300037418 Bacteria 1562
175 Ga0395898_0021677 3300037466 Bacteria 6512
176 Ga0395898_0033423 3300037466 Bacteria 5133
177 Ga0395905_0000135 3300037471 Bacteria 121352
178 Ga0395901_0002390 3300038443 Bacteria 19092
179 Ga0395901_0008353 3300038443 Bacteria 10467
180 Ga0395901_0012468 3300038443 Bacteria 8627
181 Ga0395901_0100351 3300038443 Bacteria 3036
182 Ga0400484_04205 3300038725 Unclassified 1425
183 Ga0400484_19030 3300038725 Bacteria 4429
184 Ga0400484_27386 3300038725 Bacteria 18345
185 Ga0400490_54643 3300038726 Bacteria 2604
186 Ga0400488_40937 3300038741 Unclassified 2821
187 Ga0400486_05980 3300038742 Bacteria 38190
188 Ga0400486_08302 3300038742 Bacteria 4576
189 Ga0400489_92166 3300039093 Bacteria 5971
190 Ga0400487_27167 3300039110 Bacteria 7452
191 Ga0436360_0603279 3300039438 Bacteria 16040
192 Ga0436361_0411921 3300039447 Bacteria 1272
193 Ga0451577_0012034 3300042876 Bacteria 8142
194 Ga0451577_0032950 3300042876 Bacteria 4670
195 Ga0451577_0061404 3300042876 Bacteria 3352
196 Ga0451577_0071942 3300042876 Bacteria 3084
197 Ga0451577_0183989 3300042876 Bacteria 1884
198 Ga0453683_0074567 3300044673 Bacteria 2124
199 Ga0466963_0237559 3300044694 Bacteria 1277
200 Ga0453684_0000015 3300044712 Bacteria 969198
201 Ga0453684_0000020 3300044712 Bacteria 879938
202 Ga0453684_0000114 3300044712 Bacteria 356610
203 Ga0453684_0002846 3300044712 Bacteria 40695
204 Ga0453684_0009353 3300044712 Bacteria 17175
205 Ga0453684_0033151 3300044712 Bacteria 7206
206 Ga0453684_0304064 3300044712 Bacteria 1812
207 Ga0466957_0012853 3300044842 Bacteria 4852
208 Ga0451576_0000440 3300045051 Bacteria 94835
209 Ga0451576_0002062 3300045051 Bacteria 31584
210 Ga0451576_0096232 3300045051 Bacteria 3080
211 Ga0466967_0042519 3300045976 Bacteria 3927
212 Ga0495627_000293 3300046453 Bacteria 49472
213 Ga0495603_0077466 3300046455 Bacteria 1950
214 Ga0495594_0001006 3300046499 Bacteria 14683
215 Ga0495673_0000053 3300047469 Bacteria 254433
216 Ga0496108_0017311 3300048911 Bacteria 5895
217 Ga0496112_0136235 3300048915 Bacteria 2425
218 Ga0496114_0222068 3300048917 Bacteria 1659
219 Ga0496116_0000044 3300048919 Bacteria 327709
220 Ga0496121_0000049 3300048924 Bacteria 324451
221 Ga0496125_0047562 3300048928 Bacteria 3585
222 Ga0496126_0003533 3300048929 Bacteria 19656
223 Ga0496126_0061831 3300048929 Bacteria 3362
224 Ga0501034_0001400 3300049571 Bacteria 32439
225 Ga0501034_0018735 3300049571 Bacteria 7093
226 Ga0501046_0031325 3300049580 Bacteria 4312
227 Ga0501068_0058387 3300049584 Bacteria 2341
228 Ga0501044_0013680 3300049823 Bacteria 8769
229 nmdc:mga03683_10644_c1 3300050489 Bacteria 2660
230 nmdc:mga03683_37594_c1 3300050489 Bacteria 1974
231 nmdc:mga00v17_22627_c1 3300050491 Bacteria 3628
232 nmdc:mga0yw44_190271_c1 3300050492 Bacteria 1353
233 nmdc:mga0yw44_37753_c1 3300050492 Bacteria 2854
234 nmdc:mga0k408_16372_c1 3300050493 Bacteria 4115
235 nmdc:mga06z11_81099_c1 3300050494 Bacteria 1741
236 nmdc:mga07m45_33059_c1 3300050496 Bacteria 2871
237 nmdc:mga07m45_75138_c1 3300050496 Bacteria 1925
238 nmdc:mga0qj67_26181_c1 3300050509 Bacteria 4513
239 nmdc:mga06r32_162671_c1 3300050510 Bacteria 2214
240 nmdc:mga08y16_262364_c1 3300050511 Bacteria 1784
241 nmdc:mga0sz30_819_c1 3300050516 Bacteria 5102
242 Ga0495655_0030219 3300053083 Bacteria 1309
243 Ga0500651_0045960 3300053093 Bacteria 2746
244 Ga0500641_0002910 3300053096 Bacteria 6073

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035114 Ga0373939_0051018 Ga0373939_0051018_17_937 304
2 3300037418 Ga0395900_0069394 Ga0395900_0069394_753_1766 305
3 3300037466 Ga0395898_0033423 Ga0395898_0033423_136_1149 305
4 3300038443 Ga0395901_0008353 Ga0395901_0008353_6830_7843 305
5 3300005536 Ga0070697_100016804 Ga0070697_1000168043 310
6 3300042876 Ga0451577_0012034 Ga0451577_0012034_4969_5934 311
7 3300044712 Ga0453684_0000015 Ga0453684_0000015_194911_195876 311
8 3300044712 Ga0453684_0000020 Ga0453684_0000020_201459_202433 311
9 3300044673 Ga0453683_0074567 Ga0453683_0074567_627_1601 313
10 3300031241 Ga0265325_10010948 Ga0265325_100109483 314
11 3300028666 Ga0265336_10045504 Ga0265336_100455041 323
12 3300046453 Ga0495627_000293 Ga0495627_000293_43114_44124 323
13 3300046455 Ga0495603_0077466 Ga0495603_0077466_835_1854 323
14 3300046499 Ga0495594_0001006 Ga0495594_0001006_3157_4164 323
15 3300047469 Ga0495673_0000053 Ga0495673_0000053_56602_57612 323
16 3300053093 Ga0500651_0045960 Ga0500651_0045960_796_1803 323
17 iso_pu_bacteria 2510917020 2511124581 323
18 iso_pu_bacteria 2849573788 2849576362 323
19 2162886011 MRS1b_contig_1777323 MRS1b_0832.00002520 324
20 3300001979 JGI24740J21852_10002319 JGI24740J21852_100023196 324
21 3300001979 JGI24740J21852_10019254 JGI24740J21852_100192542 324
22 3300001989 JGI24739J22299_10000996 JGI24739J22299_1000099610 324
23 3300002739 JGI25158J39367_1000046 JGI25158J39367_10000469 324
24 3300002987 JGI25159J45721_1000145 JGI25159J45721_100014514 324
25 3300003203 JGI25406J46586_10018212 JGI25406J46586_100182122 324
26 3300003322 rootL2_10076802 rootL2_100768025 324
27 3300003323 rootH1_10041227 rootH1_100412276 324
28 3300003354 JGI25160J50197_1000327 JGI25160J50197_100032714 324
29 3300003374 JGI25161J50226_1000245 JGI25161J50226_100024514 324
30 3300003775 Ga0055524_1000007 Ga0055524_1000007220 324
31 3300004625 Ga0055543_1000325 Ga0055543_100032519 324
32 3300005262 Ga0065165_1001062 Ga0065165_100106214 324
33 3300005290 Ga0065712_10070349 Ga0065712_100703494 324
34 3300005290 Ga0065712_10116790 Ga0065712_101167902 324
35 3300005327 Ga0070658_10032114 Ga0070658_100321142 324
36 3300005336 Ga0070680_100036577 Ga0070680_1000365772 324
37 3300005340 Ga0070689_100073145 Ga0070689_1000731452 324
38 3300005341 Ga0070691_10015845 Ga0070691_100158452 324
39 3300005344 Ga0070661_100193299 Ga0070661_1001932991 324
40 3300005435 Ga0070714_100014549 Ga0070714_1000145493 324
41 3300005436 Ga0070713_100130740 Ga0070713_1001307402 324
42 3300005439 Ga0070711_100026557 Ga0070711_1000265571 324
43 3300005444 Ga0070694_100028751 Ga0070694_1000287512 324
44 3300005445 Ga0070708_100019429 Ga0070708_1000194295 324
45 3300005458 Ga0070681_10000638 Ga0070681_1000063821 324
46 3300005458 Ga0070681_10002947 Ga0070681_1000294710 324
47 3300005467 Ga0070706_100080668 Ga0070706_1000806682 324
48 3300005468 Ga0070707_100057504 Ga0070707_1000575043 324
49 3300005471 Ga0070698_100026144 Ga0070698_1000261442 324
50 3300005471 Ga0070698_100153018 Ga0070698_1001530182 324
51 3300005530 Ga0070679_100000846 Ga0070679_1000008466 324
52 3300005530 Ga0070679_100420978 Ga0070679_1004209782 324
53 3300005535 Ga0070684_100017691 Ga0070684_1000176914 324
54 3300005536 Ga0070697_100008957 Ga0070697_1000089574 324
55 3300005545 Ga0070695_100011351 Ga0070695_1000113513 324
56 3300005546 Ga0070696_100233639 Ga0070696_1002336391 324
57 3300005548 Ga0070665_100078824 Ga0070665_1000788242 324
58 3300005548 Ga0070665_100258179 Ga0070665_1002581791 324
59 3300005563 Ga0068855_100017710 Ga0068855_1000177102 324
60 3300005563 Ga0068855_100028631 Ga0068855_1000286313 324
61 3300005563 Ga0068855_100029456 Ga0068855_1000294565 324
62 3300005563 Ga0068855_100080557 Ga0068855_1000805574 324
63 3300005563 Ga0068855_100100826 Ga0068855_1001008262 324
64 3300005564 Ga0070664_100012910 Ga0070664_1000129102 324
65 3300005614 Ga0068856_100011394 Ga0068856_1000113943 324
66 3300005616 Ga0068852_100007662 Ga0068852_1000076625 324
67 3300005616 Ga0068852_100014353 Ga0068852_1000143532 324
68 3300005617 Ga0068859_100345094 Ga0068859_1003450942 324
69 3300005618 Ga0068864_100001350 Ga0068864_1000013505 324
70 3300005840 Ga0068870_10105917 Ga0068870_101059171 324
71 3300005842 Ga0068858_100002407 Ga0068858_1000024079 324
72 3300005937 Ga0081455_10000863 Ga0081455_1000086317 324
73 3300005937 Ga0081455_10004269 Ga0081455_100042699 324
74 3300005985 Ga0081539_10009371 Ga0081539_100093714 324
75 3300006038 Ga0075365_10001943 Ga0075365_100019435 324
76 3300006038 Ga0075365_10163398 Ga0075365_101633982 324
77 3300006038 Ga0075365_10176759 Ga0075365_101767591 324
78 3300006048 Ga0075363_100075826 Ga0075363_1000758262 324
79 3300006051 Ga0075364_10093878 Ga0075364_100938782 324
80 3300006177 Ga0075362_10004343 Ga0075362_100043433 324
81 3300006178 Ga0075367_10102342 Ga0075367_101023422 324
82 3300006186 Ga0075369_10001199 Ga0075369_100011996 324
83 3300006195 Ga0075366_10046406 Ga0075366_100464062 324
84 3300006195 Ga0075366_10100281 Ga0075366_101002812 324
85 3300006237 Ga0097621_100178121 Ga0097621_1001781212 324
86 3300006353 Ga0075370_10219197 Ga0075370_102191971 324
87 3300006847 Ga0075431_100196148 Ga0075431_1001961482 324
88 3300006931 Ga0097620_100345093 Ga0097620_1003450932 324
89 3300006948 Ga0099826_10000053 Ga0099826_1000005368 324
90 3300007788 Ga0099795_10032038 Ga0099795_100320382 324
91 3300009093 Ga0105240_10026272 Ga0105240_100262725 324
92 3300009093 Ga0105240_10071478 Ga0105240_100714781 324
93 3300009093 Ga0105240_10125393 Ga0105240_101253932 324
94 3300009093 Ga0105240_10348801 Ga0105240_103488012 324
95 3300009094 Ga0111539_10321039 Ga0111539_103210392 324
96 3300009174 Ga0105241_10194121 Ga0105241_101941212 324
97 3300009177 Ga0105248_10004033 Ga0105248_100040332 324
98 3300009177 Ga0105248_10015434 Ga0105248_100154346 324
99 3300009551 Ga0105238_10053402 Ga0105238_100534022 324
100 3300009551 Ga0105238_10252090 Ga0105238_102520902 324
101 3300010375 Ga0105239_10010021 Ga0105239_100100218 324
102 3300010375 Ga0105239_10050015 Ga0105239_100500155 324
103 3300010375 Ga0105239_10152510 Ga0105239_101525102 324
104 3300013100 Ga0157373_10011211 Ga0157373_100112114 324
105 3300013104 Ga0157370_10009185 Ga0157370_100091858 324
106 3300013104 Ga0157370_10421668 Ga0157370_104216681 324
107 3300013105 Ga0157369_10004845 Ga0157369_100048454 324
108 3300013105 Ga0157369_10010359 Ga0157369_100103598 324
109 3300013296 Ga0157374_10114021 Ga0157374_101140213 324
110 3300013307 Ga0157372_10008973 Ga0157372_100089738 324
111 3300014325 Ga0163163_10013214 Ga0163163_100132145 324
112 3300014968 Ga0157379_10201408 Ga0157379_102014082 324
113 3300021441 Ga0213871_10000220 Ga0213871_100002207 324
114 3300025208 Ga0209436_100135 Ga0209436_10013524 324
115 3300025263 Ga0209565_1004980 Ga0209565_10049803 324
116 3300025284 Ga0209130_1000574 Ga0209130_100057424 324
117 3300025291 Ga0209675_1000999 Ga0209675_100099914 324
118 3300025298 Ga0209050_1001946 Ga0209050_100194616 324
119 3300025299 Ga0209256_1000005 Ga0209256_1000005273 324
120 3300025302 Ga0207426_1000657 Ga0207426_100065723 324
121 3300025904 Ga0207647_10153780 Ga0207647_101537802 324
122 3300025909 Ga0207705_10043975 Ga0207705_100439753 324
123 3300025910 Ga0207684_10023603 Ga0207684_100236035 324
124 3300025912 Ga0207707_10002929 Ga0207707_100029294 324
125 3300025912 Ga0207707_10006658 Ga0207707_100066585 324
126 3300025913 Ga0207695_10030906 Ga0207695_100309065 324
127 3300025913 Ga0207695_10308244 Ga0207695_103082442 324
128 3300025917 Ga0207660_10017805 Ga0207660_100178053 324
129 3300025917 Ga0207660_10033717 Ga0207660_100337172 324
130 3300025919 Ga0207657_10106986 Ga0207657_101069862 324
131 3300025920 Ga0207649_10011950 Ga0207649_100119504 324
132 3300025921 Ga0207652_10002547 Ga0207652_1000254711 324
133 3300025921 Ga0207652_10286239 Ga0207652_102862392 324
134 3300025922 Ga0207646_10015389 Ga0207646_100153892 324
135 3300025924 Ga0207694_10116978 Ga0207694_101169782 324
136 3300025926 Ga0207659_10066285 Ga0207659_100662852 324
137 3300025933 Ga0207706_10185797 Ga0207706_101857972 324
138 3300025941 Ga0207711_10008087 Ga0207711_100080876 324
139 3300025941 Ga0207711_10013985 Ga0207711_100139857 324
140 3300025944 Ga0207661_10200414 Ga0207661_102004142 324
141 3300025945 Ga0207679_10160253 Ga0207679_101602532 324
142 3300025949 Ga0207667_10015802 Ga0207667_100158025 324
143 3300025949 Ga0207667_10015872 Ga0207667_100158728 324
144 3300025949 Ga0207667_10049443 Ga0207667_100494435 324
145 3300025986 Ga0207658_10325422 Ga0207658_103254222 324
146 3300026035 Ga0207703_10009957 Ga0207703_100099575 324
147 3300026078 Ga0207702_10144996 Ga0207702_101449962 324
148 3300026088 Ga0207641_10100880 Ga0207641_101008803 324
149 3300026088 Ga0207641_10344910 Ga0207641_103449101 324
150 3300026095 Ga0207676_10005090 Ga0207676_100050904 324
151 3300026116 Ga0207674_10149548 Ga0207674_101495482 324
152 3300026116 Ga0207674_10178441 Ga0207674_101784411 324
153 3300026142 Ga0207698_10004583 Ga0207698_100045832 324
154 3300026142 Ga0207698_10022275 Ga0207698_100222752 324
155 3300027360 Ga0209969_1013395 Ga0209969_10133951 324
156 3300027666 Ga0209282_1005951 Ga0209282_10059513 324
157 3300027907 Ga0207428_10180061 Ga0207428_101800612 324
158 3300028379 Ga0268266_10068493 Ga0268266_100684933 324
159 3300028379 Ga0268266_10220158 Ga0268266_102201581 324
160 3300028800 Ga0265338_10129475 Ga0265338_101294751 324
161 3300029957 Ga0265324_10001459 Ga0265324_100014593 324
162 3300031242 Ga0265329_10018943 Ga0265329_100189432 324
163 3300031250 Ga0265331_10000484 Ga0265331_100004849 324
164 3300031250 Ga0265331_10039405 Ga0265331_100394052 324
165 3300031251 Ga0265327_10001344 Ga0265327_1000134416 324
166 3300031251 Ga0265327_10002274 Ga0265327_1000227416 324
167 3300031344 Ga0265316_10000891 Ga0265316_1000089119 324
168 3300031344 Ga0265316_10037252 Ga0265316_100372525 324
169 3300031548 Ga0307408_100001644 Ga0307408_10000164413 324
170 3300031711 Ga0265314_10054241 Ga0265314_100542414 324
171 3300031712 Ga0265342_10000026 Ga0265342_10000026148 324
172 3300032002 Ga0307416_100078287 Ga0307416_1000782873 324
173 3300035088 Ga0373940_0048508 Ga0373940_0048508_26_1006 324
174 3300035113 Ga0373936_0027532 Ga0373936_0027532_66_1046 324
175 3300035172 Ga0373955_0077578 Ga0373955_0077578_677_1693 324
176 3300035207 Ga0373942_0011023 Ga0373942_0011023_983_2002 324
177 3300035691 Ga0373931_0056453 Ga0373931_0056453_118_1137 324
178 3300035691 Ga0373931_0184399 Ga0373931_0184399_120_1139 324
179 3300035695 Ga0373927_0063621 Ga0373927_0063621_334_1350 324
180 3300036401 Ga0373937_0047575 Ga0373937_0047575_2303_3319 324
181 3300036647 Ga0316582_0114039 Ga0316582_0114039_228_1256 324
182 3300037068 Ga0373925_0102619 Ga0373925_0102619_623_1642 324
183 3300037312 Ga0395899_0032297 Ga0395899_0032297_2416_3435 324
184 3300037418 Ga0395900_0004821 Ga0395900_0004821_3680_4699 324
185 3300037418 Ga0395900_0113396 Ga0395900_0113396_371_1390 324
186 3300037418 Ga0395900_0176731 Ga0395900_0176731_951_1970 324
187 3300037418 Ga0395900_0309737 Ga0395900_0309737_508_1488 324
188 3300037466 Ga0395898_0021677 Ga0395898_0021677_3044_4063 324
189 3300037471 Ga0395905_0000135 Ga0395905_0000135_22086_23099 324
190 3300038443 Ga0395901_0002390 Ga0395901_0002390_4651_5670 324
191 3300038443 Ga0395901_0012468 Ga0395901_0012468_6043_7062 324
192 3300038443 Ga0395901_0100351 Ga0395901_0100351_1495_2514 324
193 3300038725 Ga0400484_04205 Ga0400484_04205_220_1230 324
194 3300038725 Ga0400484_19030 Ga0400484_19030_2489_3505 324
195 3300038725 Ga0400484_27386 Ga0400484_27386_1214_2227 324
196 3300038726 Ga0400490_54643 Ga0400490_54643_41_1114 324
197 3300038741 Ga0400488_40937 Ga0400488_40937_30_1043 324
198 3300038742 Ga0400486_05980 Ga0400486_05980_18750_19763 324
199 3300038742 Ga0400486_08302 Ga0400486_08302_1435_2475 324
200 3300039093 Ga0400489_92166 Ga0400489_92166_1866_2879 324
201 3300039110 Ga0400487_27167 Ga0400487_27167_1236_2255 324
202 3300039438 Ga0436360_0603279 Ga0436360_0603279_14933_15952 324
203 3300039447 Ga0436361_0411921 Ga0436361_0411921_65_1075 324
204 3300042876 Ga0451577_0032950 Ga0451577_0032950_2462_3472 324
205 3300042876 Ga0451577_0061404 Ga0451577_0061404_150_1163 324
206 3300042876 Ga0451577_0071942 Ga0451577_0071942_1054_2073 324
207 3300042876 Ga0451577_0183989 Ga0451577_0183989_236_1291 324
208 3300044694 Ga0466963_0237559 Ga0466963_0237559_21_1001 324
209 3300044712 Ga0453684_0000114 Ga0453684_0000114_50717_51733 324
210 3300044712 Ga0453684_0002846 Ga0453684_0002846_31332_32342 324
211 3300044712 Ga0453684_0009353 Ga0453684_0009353_12649_13695 324
212 3300044712 Ga0453684_0033151 Ga0453684_0033151_402_1412 324
213 3300044712 Ga0453684_0304064 Ga0453684_0304064_442_1458 324
214 3300044842 Ga0466957_0012853 Ga0466957_0012853_2737_3756 324
215 3300045051 Ga0451576_0000440 Ga0451576_0000440_62772_63782 324
216 3300045051 Ga0451576_0002062 Ga0451576_0002062_13233_14249 324
217 3300045051 Ga0451576_0096232 Ga0451576_0096232_1044_2063 324
218 3300045976 Ga0466967_0042519 Ga0466967_0042519_1808_2827 324
219 3300048911 Ga0496108_0017311 Ga0496108_0017311_1593_2576 324
220 3300048915 Ga0496112_0136235 Ga0496112_0136235_1200_2183 324
221 3300048917 Ga0496114_0222068 Ga0496114_0222068_637_1614 324
222 3300048919 Ga0496116_0000044 Ga0496116_0000044_222060_223094 324
223 3300048924 Ga0496121_0000049 Ga0496121_0000049_220717_221751 324
224 3300048928 Ga0496125_0047562 Ga0496125_0047562_2456_3463 324
225 3300048929 Ga0496126_0003533 Ga0496126_0003533_16540_17577 324
226 3300048929 Ga0496126_0061831 Ga0496126_0061831_2147_3166 324
227 3300049571 Ga0501034_0001400 Ga0501034_0001400_1623_2642 324
228 3300049571 Ga0501034_0018735 Ga0501034_0018735_4585_5604 324
229 3300049580 Ga0501046_0031325 Ga0501046_0031325_2481_3500 324
230 3300049584 Ga0501068_0058387 Ga0501068_0058387_456_1475 324
231 3300049823 Ga0501044_0013680 Ga0501044_0013680_5514_6533 324
232 3300050489 nmdc:mga03683_10644_c1 nmdc:mga03683_10644_c1_1121_2140 324
233 3300050489 nmdc:mga03683_37594_c1 nmdc:mga03683_37594_c1_525_1544 324
234 3300050491 nmdc:mga00v17_22627_c1 nmdc:mga00v17_22627_c1_1837_2856 324
235 3300050492 nmdc:mga0yw44_190271_c1 nmdc:mga0yw44_190271_c1_61_1080 324
236 3300050492 nmdc:mga0yw44_37753_c1 nmdc:mga0yw44_37753_c1_1642_2622 324
237 3300050493 nmdc:mga0k408_16372_c1 nmdc:mga0k408_16372_c1_437_1456 324
238 3300050494 nmdc:mga06z11_81099_c1 nmdc:mga06z11_81099_c1_228_1247 324
239 3300050496 nmdc:mga07m45_33059_c1 nmdc:mga07m45_33059_c1_878_1897 324
240 3300050496 nmdc:mga07m45_75138_c1 nmdc:mga07m45_75138_c1_95_1111 324
241 3300050509 nmdc:mga0qj67_26181_c1 nmdc:mga0qj67_26181_c1_2942_3919 324
242 3300050510 nmdc:mga06r32_162671_c1 nmdc:mga06r32_162671_c1_762_1739 324
243 3300050511 nmdc:mga08y16_262364_c1 nmdc:mga08y16_262364_c1_452_1471 324
244 3300050516 nmdc:mga0sz30_819_c1 nmdc:mga0sz30_819_c1_1596_2615 324
245 3300053083 Ga0495655_0030219 Ga0495655_0030219_310_1290 324
246 3300053096 Ga0500641_0002910 Ga0500641_0002910_5055_6035 324
247 iso_pu_bacteria 2842333319 2842335475 324
248 iso_pu_bacteria 2897803580 2897806245 324

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

25

274

0.93

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

26

340

0.92

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

25

152

0.87

PF07993

NAD_binding_4

Male sterility protein

27

245

0.79

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

26

182

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
7us5-assembly1.cif.gz_B x-ray crystal structure of gdp-d-glycero-d-manno-heptose 4,6-dehydratase from campylobacter jejuni 0.96 1 324
7us5-assembly1.cif.gz_B x-ray crystal structure of gdp-d-glycero-d-manno-heptose 4,6-dehydratase from campylobacter jejuni 0.9571 1 324
2pk3-assembly1.cif.gz_B crystal structure of a gdp-4-keto-6-deoxy-d-mannose reductase 0.9569 1 313
1rpn-assembly3.cif.gz_C crystal structure of gdp-d-mannose 4,6-dehydratase in complexes with gdp and nadph 0.9382 1 317
1n7g-assembly1.cif.gz_B crystal structure of the gdp-mannose 4,6-dehydratase ternary complex with nadph and gdp-rhamnose. 0.9316 1 317
ID Description Score Start End Superfamily
2pk3B02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9479 179 313 3.90.25.10
2pk3B02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9274 179 313 3.90.25.10
af_F1QPT3_45_368_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9219 16 311 3.40.50.720
af_P0AC88_3_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9178 1 253 3.40.50.720
2pk3B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9089 1 297 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2A5JY12-F1-model_v4 deleted 0.9703 1 314
AF-A0A0F9SBD4-F1-model_v4 NAD(P)-binding domain-containing protein 0.9684 1 313
AF-A0A7Z9UQR4-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9677 39 317 GO:0008446
AF-A0A7X2NBZ8-F1-model_v4 deleted 0.9659 1 313
AF-A0A382JUI2-F1-model_v4 NAD(P)-binding domain-containing protein 0.9653 151 314 GO:0008446

Feature Viewer

pLDDT pTM Quality
93.11 0.9 High
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Predicted Structure (AlphaFold2)

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