F360183

General Info

Members Datasets Scaffolds Average Seq Length
248 185 496 398

Family's Representative Sequence

Representative Sequence 3300046694|Ga0495649_0058598|Ga0495649_0058598_477_1781
Length 421
Sequence MLRLLHAKALRNLRAHHRNAFMISLADLQRRIDAGDLSADAAIAQSLEAIRAHEKSIGAFVCHDPNARAQGAGPLRGIAVGIKDIMDTVDFPTEMGSPIYRGFRSRGDAAVVMLLKQAGATIVGKTTTTAFASVDPTPTLNPRNHGHTPGMIPLALGTQTGGSVIRPASFCGVAAIKPSYRLLPTVGVKCYSWTLDTVGLFAAGVDDVARGLSAMTGRSELLLPSSILTPRIGIVTQDFAGAPEASGGEALRIATEAAERAGASVRALALPEIVGEAWHAHSIVQEFEAHRALAWEYRENYQAMAPLLRARLDESKGTPPAAYDEAMGISGRARHALAKVFEDVDVLLTLSAPGAAPKGLGSTGDARYNRLWTLMGVPCVNVPTLIADGGLPVGVQVIARYGADAEALTAARFVEEALKGK

Samples

Sample ID Description Type Environment
1 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
58 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
62 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
69 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
70 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
71 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
72 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
77 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
84 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
85 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
86 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
87 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
88 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
89 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
94 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
98 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
110 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
111 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
112 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
115 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
124 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
152 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
153 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
154 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
155 3300053115 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere Metagenome Endosphere
156 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
157 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
158 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
161 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
162 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
163 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
164 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
165 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
166 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
167 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
168 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
169 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
170 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
171 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
172 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
173 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
174 2791355199
175 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
176 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
177 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
178 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
179 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
180 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
181 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
182 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
183 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
184 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
185 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.33
Metatranscriptomes 0
Isolates 5.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.5
Nodule 3.63
Rhizoplane 10.08
Rhizosphere 62.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495649_0058598 3300046694 Bacteria 2075
2 JGI25406J46586_10000006 3300003203 Bacteria 114937
3 JGI25153J46596_10000691 3300003215 Bacteria 20594
4 rootH1_10125050 3300003323 Bacteria 1644
5 Ga0070691_10047580 3300005341 Bacteria 2039
6 Ga0070668_100053285 3300005347 Bacteria 3119
7 Ga0070668_100086533 3300005347 Bacteria 2464
8 Ga0070674_100059487 3300005356 Bacteria 2660
9 Ga0070663_100058617 3300005455 Bacteria 2765
10 Ga0070678_100054861 3300005456 Bacteria 2907
11 Ga0070678_100103118 3300005456 Bacteria 2215
12 Ga0070681_10044848 3300005458 Bacteria 4426
13 Ga0070672_100063543 3300005543 Bacteria 2915
14 Ga0068855_100197122 3300005563 Bacteria 2268
15 Ga0070664_100128461 3300005564 Bacteria 2225
16 Ga0068854_100080732 3300005578 Bacteria 2400
17 Ga0068856_100000427 3300005614 Bacteria 46259
18 Ga0068864_100026870 3300005618 Bacteria 4854
19 Ga0068861_100039501 3300005719 Bacteria 3522
20 Ga0068861_100160373 3300005719 Bacteria 1854
21 Ga0068863_100279018 3300005841 Bacteria 1619
22 Ga0081455_10004176 3300005937 Bacteria 16283
23 Ga0081455_10027996 3300005937 Bacteria 5155
24 Ga0081455_10028478 3300005937 Bacteria 5104
25 Ga0081540_1000916 3300005983 Bacteria 26580
26 Ga0081540_1005549 3300005983 Bacteria 9399
27 Ga0081540_1015338 3300005983 Bacteria 4855
28 Ga0081539_10000176 3300005985 Bacteria 150292
29 Ga0075365_10021295 3300006038 Bacteria 4042
30 Ga0070712_100115199 3300006175 Bacteria 2014
31 Ga0075369_10034493 3300006186 Bacteria 2148
32 Ga0068865_100031881 3300006881 Bacteria 3517
33 Ga0075435_100101327 3300007076 Bacteria 2386
34 Ga0105245_10014670 3300009098 Bacteria 6823
35 Ga0105245_10057068 3300009098 Bacteria 3511
36 Ga0105245_10275888 3300009098 Bacteria 1641
37 Ga0105242_10293498 3300009176 Bacteria 1481
38 Ga0105248_10103595 3300009177 Bacteria 3208
39 Ga0105248_10151116 3300009177 Bacteria 2620
40 Ga0105237_10106194 3300009545 Bacteria 2800
41 Ga0105237_10190603 3300009545 Bacteria 2050
42 Ga0099796_10006029 3300010159 Bacteria 3076
43 Ga0105239_10199403 3300010375 Bacteria 2242
44 Ga0105246_10017594 3300011119 Bacteria 4547
45 Ga0157370_10019096 3300013104 Bacteria 6890
46 Ga0157378_10010133 3300013297 Bacteria 8218
47 Ga0157375_10038991 3300013308 Bacteria 4567
48 Ga0157375_10055330 3300013308 Bacteria 3912
49 Ga0157380_10181573 3300014326 Bacteria 1849
50 Ga0157379_10044549 3300014968 Bacteria 3961
51 Ga0163161_10076566 3300017792 Bacteria 2456
52 Ga0163161_10122001 3300017792 Bacteria 1959
53 Ga0209758_1005312 3300025297 Bacteria 10049
54 Ga0207671_10254286 3300025914 Bacteria 1381
55 Ga0207693_10045030 3300025915 Bacteria 3467
56 Ga0207691_10021301 3300025940 Bacteria 6121
57 Ga0207712_10249199 3300025961 Bacteria 1435
58 Ga0207668_10025031 3300025972 Bacteria 3858
59 Ga0207668_10127426 3300025972 Bacteria 1938
60 Ga0207677_10033971 3300026023 Bacteria 3297
61 Ga0207639_10168589 3300026041 Bacteria 1852
62 Ga0207678_10015643 3300026067 Bacteria 6670
63 Ga0207708_10027259 3300026075 Bacteria 4325
64 Ga0207702_10002256 3300026078 Bacteria 18481
65 Ga0207675_100132691 3300026118 Bacteria 2361
66 Ga0207683_10112734 3300026121 Bacteria 2435
67 Ga0207683_10127079 3300026121 Bacteria 2291
68 Ga0207683_10207168 3300026121 Bacteria 1784
69 Ga0209588_1004105 3300027671 Bacteria 4081
70 Ga0268265_10047614 3300028380 Bacteria 3214
71 Ga0307517_10000369 3300028786 Bacteria 77795
72 Ga0307515_10030519 3300028794 Bacteria 9043
73 Ga0307511_10067468 3300030521 Bacteria 2654
74 Ga0265332_10009265 3300031238 Bacteria 4399
75 Ga0265332_10036735 3300031238 Bacteria 2126
76 Ga0265340_10000672 3300031247 Bacteria 19165
77 Ga0265316_10100477 3300031344 Bacteria 2199
78 Ga0307509_10020646 3300031507 Bacteria 7470
79 Ga0307509_10234643 3300031507 Bacteria 1633
80 Ga0307508_10000010 3300031616 Bacteria 255747
81 Ga0307508_10167387 3300031616 Bacteria 1801
82 Ga0265314_10003900 3300031711 Bacteria 14176
83 Ga0265342_10117705 3300031712 Bacteria 1499
84 Ga0307516_10012676 3300031730 Bacteria 9064
85 Ga0307516_10160000 3300031730 Bacteria 2003
86 Ga0307510_10005745 3300033180 Bacteria 14788
87 Ga0307510_10092142 3300033180 Bacteria 2869
88 Ga0373923_0018899 3300035111 Bacteria 2660
89 Ga0373953_0002563 3300035117 Bacteria 5492
90 Ga0373954_0000067 3300035118 Bacteria 37060
91 Ga0373954_0033721 3300035118 Bacteria 2369
92 Ga0373956_0000552 3300035119 Bacteria 15350
93 Ga0373957_0000973 3300035120 Bacteria 7524
94 Ga0373946_0057504 3300035171 Bacteria 1645
95 Ga0373955_0000487 3300035172 Bacteria 16820
96 Ga0373955_0068605 3300035172 Bacteria 1976
97 Ga0373935_0019651 3300035692 Bacteria 4118
98 Ga0373927_0000689 3300035695 Bacteria 25810
99 Ga0373927_0002657 3300035695 Bacteria 13028
100 Ga0373927_0009140 3300035695 Bacteria 6652
101 Ga0373927_0058477 3300035695 Bacteria 2493
102 Ga0373933_0003441 3300035724 Bacteria 8813
103 Ga0373947_0002567 3300035725 Bacteria 10914
104 Ga0373937_0002165 3300036401 Bacteria 16456
105 Ga0373937_0007658 3300036401 Bacteria 9357
106 Ga0373925_0009228 3300037068 Bacteria 7180
107 Ga0373925_0105732 3300037068 Bacteria 2169
108 Ga0373925_0116816 3300037068 Bacteria 2067
109 Ga0395901_0122576 3300038443 Bacteria 2732
110 Ga0495592_0013740 3300046454 Bacteria 6157
111 Ga0495592_0022417 3300046454 Bacteria 4805
112 Ga0495629_0000398 3300046459 Bacteria 36605
113 Ga0495629_0001500 3300046459 Bacteria 18364
114 Ga0495641_0053204 3300046461 Bacteria 1842
115 Ga0495651_0009232 3300046462 Bacteria 7569
116 Ga0495651_0071809 3300046462 Bacteria 2631
117 Ga0495653_0000598 3300046463 Bacteria 27691
118 Ga0495653_0094872 3300046463 Bacteria 2173
119 Ga0495580_0017445 3300046472 Bacteria 5370
120 Ga0495580_0063647 3300046472 Bacteria 2586
121 Ga0495582_0001498 3300046473 Bacteria 13187
122 Ga0495639_0002214 3300046475 Bacteria 8558
123 Ga0495662_0012718 3300046476 Bacteria 4104
124 Ga0495664_0033697 3300046477 Bacteria 3011
125 Ga0495584_0082256 3300046491 Bacteria 1621
126 Ga0495585_0048246 3300046492 Bacteria 2368
127 Ga0495594_0002146 3300046499 Bacteria 10267
128 Ga0495594_0127221 3300046499 Bacteria 1442
129 Ga0495618_0127678 3300046514 Bacteria 1627
130 Ga0495628_0095173 3300046516 Bacteria 2301
131 Ga0495628_0115294 3300046516 Bacteria 2063
132 Ga0495630_0002211 3300046517 Bacteria 13546
133 Ga0495648_0000552 3300046524 Bacteria 40192
134 Ga0495652_0020199 3300046529 Bacteria 5921
135 Ga0495640_0009889 3300046533 Bacteria 7398
136 Ga0495640_0016796 3300046533 Bacteria 5471
137 Ga0495587_0100636 3300046536 Bacteria 1665
138 Ga0495645_0044600 3300046543 Bacteria 3234
139 Ga0495622_0025481 3300046557 Bacteria 2762
140 Ga0495667_0051609 3300046559 Bacteria 2712
141 Ga0495656_0076521 3300046615 Bacteria 1499
142 Ga0495634_0001270 3300046642 Bacteria 23127
143 Ga0495634_0069314 3300046642 Bacteria 2327
144 Ga0495635_0000102 3300046663 Bacteria 50623
145 Ga0495659_0040763 3300046664 Bacteria 1657
146 Ga0495657_0000677 3300046675 Bacteria 30671
147 Ga0495599_0004277 3300046678 Bacteria 8439
148 Ga0495599_0095258 3300046678 Bacteria 1857
149 Ga0495623_0000625 3300046679 Bacteria 23594
150 Ga0495646_0044126 3300046680 Bacteria 2727
151 Ga0495647_0000649 3300046681 Bacteria 10310
152 Ga0495658_0001998 3300046683 Bacteria 10393
153 Ga0495669_0051318 3300046684 Bacteria 1851
154 Ga0495613_0004899 3300046689 Bacteria 10058
155 Ga0495613_0052135 3300046689 Bacteria 3014
156 Ga0495670_0013237 3300046691 Bacteria 4057
157 Ga0495600_0004564 3300046809 Bacteria 8302
158 Ga0495604_0087921 3300047317 Bacteria 2313
159 Ga0495674_0014114 3300047319 Bacteria 7483
160 Ga0495674_0057826 3300047319 Bacteria 3393
161 Ga0495672_0124073 3300047320 Bacteria 1368
162 Ga0495675_0000456 3300047444 Bacteria 26992
163 Ga0495684_0000088 3300047471 Bacteria 64704
164 Ga0495684_0049144 3300047471 Bacteria 3224
165 Ga0495593_0002275 3300047673 Bacteria 11512
166 Ga0495593_0003108 3300047673 Bacteria 9989
167 Ga0495614_0084827 3300048089 Bacteria 1374
168 Ga0496101_0013079 3300048904 Bacteria 5551
169 Ga0496102_0045694 3300048905 Bacteria 3976
170 Ga0496102_0054897 3300048905 Bacteria 3633
171 Ga0496103_0047526 3300048906 Bacteria 2652
172 Ga0496104_0060907 3300048907 Bacteria 3576
173 Ga0496104_0114890 3300048907 Bacteria 2582
174 Ga0496105_0005894 3300048908 Bacteria 9345
175 Ga0496105_0169447 3300048908 Bacteria 1790
176 Ga0496107_0001973 3300048910 Bacteria 13057
177 Ga0496107_0084160 3300048910 Bacteria 2320
178 Ga0496108_0025927 3300048911 Bacteria 4835
179 Ga0496109_0033009 3300048912 Bacteria 4656
180 Ga0496110_0022837 3300048913 Bacteria 5315
181 Ga0496110_0044097 3300048913 Bacteria 3894
182 Ga0496110_0076156 3300048913 Bacteria 2983
183 Ga0496111_0007046 3300048914 Bacteria 7344
184 Ga0496112_0000004 3300048915 Bacteria 553294
185 Ga0496112_0029896 3300048915 Bacteria 5271
186 Ga0496112_0040043 3300048915 Bacteria 4581
187 Ga0496112_0092468 3300048915 Bacteria 2994
188 Ga0496113_0073068 3300048916 Bacteria 2612
189 Ga0496114_0034515 3300048917 Bacteria 4174
190 Ga0496114_0075219 3300048917 Bacteria 2844
191 Ga0496114_0336199 3300048917 Bacteria 1335
192 Ga0496115_0002110 3300048918 Bacteria 14231
193 Ga0496117_0014084 3300048920 Bacteria 6914
194 Ga0496118_0005685 3300048921 Bacteria 14047
195 Ga0496121_0000398 3300048924 Bacteria 87272
196 Ga0496121_0000664 3300048924 Bacteria 64277
197 Ga0496122_0060228 3300048925 Bacteria 2797
198 Ga0496124_0001166 3300048927 Bacteria 41149
199 Ga0496125_0112278 3300048928 Bacteria 1970
200 Ga0496126_0002030 3300048929 Bacteria 28578
201 Ga0496126_0016034 3300048929 Bacteria 7514
202 Ga0496126_0197508 3300048929 Bacteria 1700
203 nmdc:mga0yw44_59434_c1 3300050492 Bacteria 2339
204 nmdc:mga0rr50_90054_c1 3300050513 Bacteria 2386
205 Ga0495601_0061993 3300053077 Bacteria 2374
206 Ga0495601_0102297 3300053077 Bacteria 1851
207 Ga0500635_0003791 3300053080 Bacteria 3833
208 Ga0500635_0004343 3300053080 Bacteria 3647
209 Ga0495595_0000759 3300053084 Bacteria 12251
210 Ga0500566_0000516 3300053094 Bacteria 21571
211 Ga0500566_0016311 3300053094 Bacteria 4362
212 Ga0500566_0087523 3300053094 Bacteria 1725
213 Ga0500554_002713 3300053102 Bacteria 3523
214 Ga0500556_0054679 3300053104 Bacteria 1454
215 Ga0500572_000055 3300053111 Bacteria 34260
216 Ga0500591_055341 3300053115 Bacteria 1846
217 Ga0500595_000159 3300053119 Bacteria 44312
218 Ga0500595_002668 3300053119 Bacteria 8676
219 Ga0500608_014707 3300053122 Bacteria 3500
220 Ga0500614_007217 3300053123 Bacteria 2340
221 Ga0500559_0000947 3300053136 Bacteria 18267
222 Ga0500568_0003849 3300053139 Bacteria 8187
223 Ga0500573_0010390 3300053140 Bacteria 5195
224 Ga0500603_000052 3300053150 Bacteria 28617
225 Ga0500604_0011699 3300053151 Bacteria 2362
226 Ga0500630_001061 3300053159 Bacteria 12856
227 Ga0500638_001268 3300053162 Bacteria 7729
228 Ga0500639_000004 3300053163 Bacteria 216921
229 Ga0500639_055981 3300053163 Bacteria 2043
230 Ga0500636_0112385 3300053177 Bacteria 1537
231 Ga0500637_0000349 3300053178 Bacteria 17523
232 Ga0500596_002723 3300053735 Bacteria 3465
233 Ga0500661_002278 3300055283 Bacteria 3626
234 2513691655 2513237101 Bacteria 7952346
235 2524469894 2524023210 Bacteria 9029266
236 2723845925 2721755755 Bacteria 8322773
237 2793082678
238 2874609420 2874604998 Bacteria 7834745
239 2876813194 2876808645 Bacteria 8824342
240 2879110358 2879110137 Bacteria 8907982
241 2885386633 2885383462 Bacteria 9473874
242 2889040779 2889033259 Bacteria 9099371
243 2903774615 2903768456 Bacteria 9749579
244 2922367877 2922361189 Bacteria 7436256
245 2922392232 2922386360 Bacteria 7017218
246 8006968710 8006964411 Bacteria 8966052
247 8006990549 8006984368 Bacteria 9651211
248 8006996304 8006994254 Bacteria 8309700
249 Ga0495649_0058598
250 JGI25406J46586_10000006
251 JGI25153J46596_10000691
252 rootH1_10125050
253 Ga0070691_10047580
254 Ga0070668_100053285
255 Ga0070668_100086533
256 Ga0070674_100059487
257 Ga0070663_100058617
258 Ga0070678_100054861
259 Ga0070678_100103118
260 Ga0070681_10044848
261 Ga0070672_100063543
262 Ga0068855_100197122
263 Ga0070664_100128461
264 Ga0068854_100080732
265 Ga0068856_100000427
266 Ga0068864_100026870
267 Ga0068861_100039501
268 Ga0068861_100160373
269 Ga0068863_100279018
270 Ga0081455_10004176
271 Ga0081455_10027996
272 Ga0081455_10028478
273 Ga0081540_1000916
274 Ga0081540_1005549
275 Ga0081540_1015338
276 Ga0081539_10000176
277 Ga0075365_10021295
278 Ga0070712_100115199
279 Ga0075369_10034493
280 Ga0068865_100031881
281 Ga0075435_100101327
282 Ga0105245_10014670
283 Ga0105245_10057068
284 Ga0105245_10275888
285 Ga0105242_10293498
286 Ga0105248_10103595
287 Ga0105248_10151116
288 Ga0105237_10106194
289 Ga0105237_10190603
290 Ga0099796_10006029
291 Ga0105239_10199403
292 Ga0105246_10017594
293 Ga0157370_10019096
294 Ga0157378_10010133
295 Ga0157375_10038991
296 Ga0157375_10055330
297 Ga0157380_10181573
298 Ga0157379_10044549
299 Ga0163161_10076566
300 Ga0163161_10122001
301 Ga0209758_1005312
302 Ga0207671_10254286
303 Ga0207693_10045030
304 Ga0207691_10021301
305 Ga0207712_10249199
306 Ga0207668_10025031
307 Ga0207668_10127426
308 Ga0207677_10033971
309 Ga0207639_10168589
310 Ga0207678_10015643
311 Ga0207708_10027259
312 Ga0207702_10002256
313 Ga0207675_100132691
314 Ga0207683_10112734
315 Ga0207683_10127079
316 Ga0207683_10207168
317 Ga0209588_1004105
318 Ga0268265_10047614
319 Ga0307517_10000369
320 Ga0307515_10030519
321 Ga0307511_10067468
322 Ga0265332_10009265
323 Ga0265332_10036735
324 Ga0265340_10000672
325 Ga0265316_10100477
326 Ga0307509_10020646
327 Ga0307509_10234643
328 Ga0307508_10000010
329 Ga0307508_10167387
330 Ga0265314_10003900
331 Ga0265342_10117705
332 Ga0307516_10012676
333 Ga0307516_10160000
334 Ga0307510_10005745
335 Ga0307510_10092142
336 Ga0373923_0018899
337 Ga0373953_0002563
338 Ga0373954_0000067
339 Ga0373954_0033721
340 Ga0373956_0000552
341 Ga0373957_0000973
342 Ga0373946_0057504
343 Ga0373955_0000487
344 Ga0373955_0068605
345 Ga0373935_0019651
346 Ga0373927_0000689
347 Ga0373927_0002657
348 Ga0373927_0009140
349 Ga0373927_0058477
350 Ga0373933_0003441
351 Ga0373947_0002567
352 Ga0373937_0002165
353 Ga0373937_0007658
354 Ga0373925_0009228
355 Ga0373925_0105732
356 Ga0373925_0116816
357 Ga0395901_0122576
358 Ga0495592_0013740
359 Ga0495592_0022417
360 Ga0495629_0000398
361 Ga0495629_0001500
362 Ga0495641_0053204
363 Ga0495651_0009232
364 Ga0495651_0071809
365 Ga0495653_0000598
366 Ga0495653_0094872
367 Ga0495580_0017445
368 Ga0495580_0063647
369 Ga0495582_0001498
370 Ga0495639_0002214
371 Ga0495662_0012718
372 Ga0495664_0033697
373 Ga0495584_0082256
374 Ga0495585_0048246
375 Ga0495594_0002146
376 Ga0495594_0127221
377 Ga0495618_0127678
378 Ga0495628_0095173
379 Ga0495628_0115294
380 Ga0495630_0002211
381 Ga0495648_0000552
382 Ga0495652_0020199
383 Ga0495640_0009889
384 Ga0495640_0016796
385 Ga0495587_0100636
386 Ga0495645_0044600
387 Ga0495622_0025481
388 Ga0495667_0051609
389 Ga0495656_0076521
390 Ga0495634_0001270
391 Ga0495634_0069314
392 Ga0495635_0000102
393 Ga0495659_0040763
394 Ga0495657_0000677
395 Ga0495599_0004277
396 Ga0495599_0095258
397 Ga0495623_0000625
398 Ga0495646_0044126
399 Ga0495647_0000649
400 Ga0495658_0001998
401 Ga0495669_0051318
402 Ga0495613_0004899
403 Ga0495613_0052135
404 Ga0495670_0013237
405 Ga0495600_0004564
406 Ga0495604_0087921
407 Ga0495674_0014114
408 Ga0495674_0057826
409 Ga0495672_0124073
410 Ga0495675_0000456
411 Ga0495684_0000088
412 Ga0495684_0049144
413 Ga0495593_0002275
414 Ga0495593_0003108
415 Ga0495614_0084827
416 Ga0496101_0013079
417 Ga0496102_0045694
418 Ga0496102_0054897
419 Ga0496103_0047526
420 Ga0496104_0060907
421 Ga0496104_0114890
422 Ga0496105_0005894
423 Ga0496105_0169447
424 Ga0496107_0001973
425 Ga0496107_0084160
426 Ga0496108_0025927
427 Ga0496109_0033009
428 Ga0496110_0022837
429 Ga0496110_0044097
430 Ga0496110_0076156
431 Ga0496111_0007046
432 Ga0496112_0000004
433 Ga0496112_0029896
434 Ga0496112_0040043
435 Ga0496112_0092468
436 Ga0496113_0073068
437 Ga0496114_0034515
438 Ga0496114_0075219
439 Ga0496114_0336199
440 Ga0496115_0002110
441 Ga0496117_0014084
442 Ga0496118_0005685
443 Ga0496121_0000398
444 Ga0496121_0000664
445 Ga0496122_0060228
446 Ga0496124_0001166
447 Ga0496125_0112278
448 Ga0496126_0002030
449 Ga0496126_0016034
450 Ga0496126_0197508
451 nmdc:mga0yw44_59434_c1
452 nmdc:mga0rr50_90054_c1
453 Ga0495601_0061993
454 Ga0495601_0102297
455 Ga0500635_0003791
456 Ga0500635_0004343
457 Ga0495595_0000759
458 Ga0500566_0000516
459 Ga0500566_0016311
460 Ga0500566_0087523
461 Ga0500554_002713
462 Ga0500556_0054679
463 Ga0500572_000055
464 Ga0500591_055341
465 Ga0500595_000159
466 Ga0500595_002668
467 Ga0500608_014707
468 Ga0500614_007217
469 Ga0500559_0000947
470 Ga0500568_0003849
471 Ga0500573_0010390
472 Ga0500603_000052
473 Ga0500604_0011699
474 Ga0500630_001061
475 Ga0500638_001268
476 Ga0500639_000004
477 Ga0500639_055981
478 Ga0500636_0112385
479 Ga0500637_0000349
480 Ga0500596_002723
481 Ga0500661_002278
482 2513691655
483 2524469894
484 2723845925
485 2793082678
486 2874609420
487 2876813194
488 2879110358
489 2885386633
490 2889040779
491 2903774615
492 2922367877
493 2922392232
494 8006968710
495 8006990549
496 8006996304

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

28

408

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o9p-assembly1.cif.gz_B crystal structure of the s131a mutant of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.8695 3 396
1obk-assembly1.cif.gz_B crystal structure of the r158q mutant of malonamidase e2 from bradyrhizobium japonicum 0.8693 3 396
1obj-assembly1.cif.gz_B crystal structure of the t150a mutant of malonamidase e2 from bradyrhizobium japonicum 0.8692 3 396
1obi-assembly1.cif.gz_B crystal structure of the g130a mutant of malonamidase e2 from bradyrhizobium japonicum 0.869 3 396
1o9q-assembly1.cif.gz_A crystal structure of the s155c mutant of malonamidase e2 from bradyrhizobium japonicum 0.8689 3 396
ID Description Score Start End Superfamily
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.867 3 396 3.90.1300.10
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8607 3 396 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.7892 6 393 3.90.1300.10
af_Q9LI77_43_527_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.7878 6 391 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.7726 6 393 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A537V7K3-F1-model_v4 Amidase 0.9453 193 395
AF-A0A562BQ14-F1-model_v4 Amidase 0.9387 242 394 GO:0003824
AF-A0A4Q3J6D8-F1-model_v4 Amidase 0.9386 252 396
AF-A0A2G4J7S2-F1-model_v4 Amidase domain-containing protein 0.9373 199 395
AF-A0A536ZHA5-F1-model_v4 Amidase 0.9365 268 394

Map