F360215

General Info

Members Datasets Scaffolds Average Seq Length
248 195 199 600

Family's Representative Sequence

Representative Sequence 3300048917|Ga0496114_0055287|Ga0496114_0055287_670_2577
Length 635
Sequence VLDHISLGEGETMTQAPERETSAAPAQRGATPDPQARTDAWLAKFESALKARDVAAASDLFATESYWRDLVAFTWNLTTVEGRDGVTDLLDATLDTTDPGGFATEEPADEADGVVTAWIGFETAAGRGRGLLRLVAEEAEDGSGSTDKAWTLLTTMYELKGFEEPRGTHRPMGAEHGANKERMTWKEKRQHEAETIGSTTQPYVLVVGGGQGGIALGARLRQLGVPSLVIDKHPRPGDQWRNRYKSLCLHDPVWYDHLPYLKFPDNWPVFAPKDKIGDWLESYTRVMEVPYWSSTTALSATWSEDKGEWTVEVEREGKPLTLRPTQLVFATGMSGKPNLPDVPGTDVFKGDVHHSSAHPGPDAYRGKKAVIIGSNNSAFDICGALWENDVDVTMVQRSSTHIVKSDSLMDIGLGDLYSERAVAAGVTTEKADLIFASLPYRILHTFQIPAYEAMAERDKDFYDRLEKSGFRHDWGDDGSGLFMKYLRRGSGYYIDVGSADLVANGDVKLAQGQIDHLTEDSVVLADGTELPADVVVFATGYGSMNGWVADLIDSETADRLGKCWGLGSDTTKDPGPWEGEQRNMWKPTQVENLWMHGGNLHQSRHYSLYLALQLKARHEGIDTPVYGLQEVHHTS

Samples

Sample ID Description Type Environment
1 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
2 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
3 2643221561 Nocardioides sp. Root151 Isolate Unclassified
4 2643221576 Nocardioides sp. Root614 Isolate Unclassified
5 2643221590 Nocardioides sp. Root682 Isolate Unclassified
6 2643221604 Nocardioides sp. Root190 Isolate Unclassified
7 2643221617 Nocardioides sp. Root79 Isolate Unclassified
8 2643221620 Nocardioides sp. Root240 Isolate Unclassified
9 2643221696 Nocardioides sp. Root140 Isolate Unclassified
10 2721755523 Delftia sp. HK171 Isolate Unclassified
11 2738541305 Nocardioides sp. CF167 Isolate Unclassified
12 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
13 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
14 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
15 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
16 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
17 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
18 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
19 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
20 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
21 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
22 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
23 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
24 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
25 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
26 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
27 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
28 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
29 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
30 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
31 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
32 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
33 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
34 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
35 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
36 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
37 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
38 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
39 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
40 2922554459 Rhodococcus sp. 66b Isolate Unclassified
41 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
42 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
43 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
44 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
45 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
46 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
47 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
48 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
49 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
50 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
51 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
52 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
53 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
54 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
55 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
56 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
57 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
58 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
59 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
60 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
61 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
62 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
63 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
64 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
65 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
66 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
67 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
68 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
69 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
70 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
71 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
72 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
73 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
74 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
75 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
76 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
78 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
79 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
80 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
81 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
82 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
83 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
84 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
85 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
86 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
87 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
88 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
89 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
90 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
91 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
92 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
93 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
94 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
95 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
96 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
97 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
98 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
99 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
100 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
101 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
133 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
135 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
138 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
139 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
140 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
141 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
142 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
143 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
144 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
145 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
146 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
147 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
148 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
149 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
150 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
151 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
152 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
153 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
154 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
155 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
156 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
157 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
158 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
159 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
160 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
161 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
162 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
163 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
164 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
165 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
166 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
167 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
168 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
169 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
170 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
171 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
172 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
173 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
174 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
175 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
176 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
177 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
178 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
179 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
180 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
181 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
182 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
183 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
184 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
185 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
186 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
188 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
189 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
192 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
193 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
194 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
195 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 80.24
Metatranscriptomes 0
Isolates 19.76

Biome Distribution

Category Percentage (%)
Aerial Root 2.42
Bulb 0
Endosphere 0.81
Nodule 2.42
Rhizoplane 11.29
Rhizosphere 68.55
Stem 0
Stem Tuber 0.4
Unclassified 14.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1001546 3300000549 Bacteria 3416
2 Ga0058692_1001100 3300003856 Bacteria 10476
3 Ga0070682_100011546 3300005337 Bacteria 5051
4 Ga0070682_100067881 3300005337 Bacteria 2272
5 Ga0068868_100023188 3300005338 Bacteria 4695
6 Ga0068868_100030220 3300005338 Bacteria 4154
7 Ga0070691_10010783 3300005341 Bacteria 4169
8 Ga0070691_10018071 3300005341 Bacteria 3247
9 Ga0070692_10005686 3300005345 Bacteria 5348
10 Ga0070668_100027857 3300005347 Bacteria 4289
11 Ga0070671_100001367 3300005355 Bacteria 18280
12 Ga0070674_100058938 3300005356 Bacteria 2671
13 Ga0070700_100015726 3300005441 Bacteria 4296
14 Ga0070700_100027966 3300005441 Bacteria 3349
15 Ga0070700_100028426 3300005441 Bacteria 3326
16 Ga0070663_100032110 3300005455 Bacteria 3616
17 Ga0068867_100016295 3300005459 Bacteria 5278
18 Ga0068867_100133107 3300005459 Bacteria 1935
19 Ga0070685_10033872 3300005466 Bacteria 2874
20 Ga0070698_100003959 3300005471 Bacteria 16291
21 Ga0070684_100016162 3300005535 Bacteria 6096
22 Ga0068853_100142195 3300005539 Bacteria 2154
23 Ga0070665_100003950 3300005548 Bacteria 15646
24 Ga0068854_100088067 3300005578 Bacteria 2305
25 Ga0068856_100027856 3300005614 Bacteria 5513
26 Ga0070702_100000529 3300005615 Bacteria 13774
27 Ga0070702_100027092 3300005615 Bacteria 3088
28 Ga0068852_100017002 3300005616 Bacteria 5694
29 Ga0068859_100036818 3300005617 Bacteria 4913
30 Ga0068864_100038790 3300005618 Bacteria 4068
31 Ga0068870_10010701 3300005840 Bacteria 4222
32 Ga0068863_100110770 3300005841 Bacteria 2614
33 Ga0068860_100102223 3300005843 Bacteria 2735
34 Ga0068860_100130350 3300005843 Bacteria 2412
35 Ga0081455_10000832 3300005937 Bacteria 39737
36 Ga0081540_1025963 3300005983 Bacteria 3356
37 Ga0097621_100042160 3300006237 Bacteria 3675
38 Ga0097621_100084890 3300006237 Bacteria 2640
39 Ga0068871_100023816 3300006358 Bacteria 4741
40 Ga0075431_100122488 3300006847 Bacteria 2683
41 Ga0075433_10013369 3300006852 Bacteria 6671
42 Ga0075433_10020445 3300006852 Bacteria 5535
43 Ga0075434_100040301 3300006871 Bacteria 4625
44 Ga0075434_100042825 3300006871 Bacteria 4489
45 Ga0075436_100003139 3300006914 Bacteria 11328
46 Ga0097620_100036819 3300006931 Bacteria 4913
47 Ga0079104_1000004 3300006946 Bacteria 444549
48 Ga0075435_100004112 3300007076 Bacteria 9976
49 Ga0075435_100105092 3300007076 Bacteria 2343
50 Ga0105250_10001880 3300009092 Bacteria 10915
51 Ga0111539_10036550 3300009094 Bacteria 5936
52 Ga0111539_10049014 3300009094 Bacteria 5040
53 Ga0111539_10092758 3300009094 Bacteria 3548
54 Ga0111539_10204271 3300009094 Bacteria 2303
55 Ga0105245_10024109 3300009098 Bacteria 5342
56 Ga0105245_10100810 3300009098 Bacteria 2672
57 Ga0105247_10053284 3300009101 Bacteria 2495
58 Ga0114129_10161338 3300009147 Bacteria 3062
59 Ga0105243_10117787 3300009148 Bacteria 2234
60 Ga0105242_10007127 3300009176 Bacteria 8628
61 Ga0105237_10174485 3300009545 Bacteria 2150
62 Ga0105246_10016730 3300011119 Bacteria 4649
63 Ga0105246_10017081 3300011119 Bacteria 4608
64 Ga0157373_10059516 3300013100 Bacteria 2707
65 Ga0157375_10172644 3300013308 Bacteria 2310
66 Ga0163163_10162947 3300014325 Bacteria 2276
67 Ga0157377_10010980 3300014745 Bacteria 4503
68 Ga0157377_10036690 3300014745 Bacteria 2698
69 Ga0157379_10007183 3300014968 Bacteria 9634
70 Ga0213876_10023247 3300021384 Bacteria 3275
71 Ga0213875_10000604 3300021388 Bacteria 29093
72 Ga0207656_10015016 3300025321 Bacteria 2993
73 Ga0207696_1010649 3300025711 Bacteria 3359
74 Ga0207688_10001434 3300025901 Bacteria 12446
75 Ga0207688_10002490 3300025901 Bacteria 9917
76 Ga0207647_10014956 3300025904 Bacteria 5333
77 Ga0207645_10038462 3300025907 Bacteria 3068
78 Ga0207643_10003693 3300025908 Bacteria 8234
79 Ga0207643_10004552 3300025908 Bacteria 7447
80 Ga0207705_10018054 3300025909 Bacteria 5045
81 Ga0207654_10031400 3300025911 Bacteria 2925
82 Ga0207693_10008551 3300025915 Bacteria 8377
83 Ga0207650_10000704 3300025925 Bacteria 26160
84 Ga0207659_10012646 3300025926 Bacteria 5380
85 Ga0207644_10068591 3300025931 Bacteria 2587
86 Ga0207706_10078347 3300025933 Bacteria 2906
87 Ga0207686_10002569 3300025934 Bacteria 9874
88 Ga0207709_10000019 3300025935 Bacteria 402225
89 Ga0207670_10016710 3300025936 Bacteria 4418
90 Ga0207704_10010259 3300025938 Bacteria 4561
91 Ga0207665_10011413 3300025939 Bacteria 5835
92 Ga0207691_10010117 3300025940 Bacteria 9054
93 Ga0207691_10060380 3300025940 Bacteria 3445
94 Ga0207689_10006729 3300025942 Bacteria 10137
95 Ga0207677_10017187 3300026023 Bacteria 4306
96 Ga0207677_10045193 3300026023 Bacteria 2939
97 Ga0207703_10029225 3300026035 Bacteria 4348
98 Ga0207678_10000807 3300026067 Bacteria 28745
99 Ga0207678_10012320 3300026067 Bacteria 7509
100 Ga0207708_10001212 3300026075 Bacteria 19473
101 Ga0207708_10005069 3300026075 Bacteria 9715
102 Ga0207708_10019855 3300026075 Bacteria 5066
103 Ga0207708_10106714 3300026075 Bacteria 2172
104 Ga0207702_10002561 3300026078 Bacteria 17113
105 Ga0207702_10007178 3300026078 Bacteria 9534
106 Ga0207702_10019528 3300026078 Bacteria 5608
107 Ga0207702_10094368 3300026078 Bacteria 2626
108 Ga0207641_10023153 3300026088 Bacteria 5118
109 Ga0207648_10003947 3300026089 Bacteria 15429
110 Ga0207648_10068088 3300026089 Bacteria 3102
111 Ga0207676_10003659 3300026095 Bacteria 10870
112 Ga0207674_10039300 3300026116 Bacteria 4906
113 Ga0207674_10081723 3300026116 Bacteria 3233
114 Ga0207683_10001553 3300026121 Bacteria 20662
115 Ga0207683_10107901 3300026121 Bacteria 2491
116 Ga0207698_10070770 3300026142 Bacteria 2765
117 Ga0209281_1000005 3300027111 Bacteria 1242284
118 Ga0209371_1000003 3300027312 Bacteria 1122971
119 Ga0209371_1000792 3300027312 Bacteria 26098
120 Ga0207428_10004456 3300027907 Bacteria 13294
121 Ga0207428_10069525 3300027907 Bacteria 2769
122 Ga0268266_10037477 3300028379 Bacteria 4130
123 Ga0268264_10004745 3300028381 Bacteria 11545
124 Ga0268256_1000004 3300030500 Bacteria 1122967
125 Ga0316578_10021607 3300031728 Bacteria 3573
126 Ga0307518_10000653 3300031838 Bacteria 26076
127 Ga0307407_10022016 3300031903 Bacteria 3298
128 Ga0307409_100005888 3300031995 Bacteria 7122
129 Ga0307416_100012973 3300032002 Bacteria 5643
130 Ga0307416_100027260 3300032002 Bacteria 4227
131 Ga0307414_10017358 3300032004 Bacteria 4401
132 Ga0373934_0014681 3300035086 Bacteria 2968
133 Ga0373947_0040962 3300035725 Bacteria 2761
134 Ga0316584_0052403 3300036712 Bacteria 3051
135 Ga0395899_0001340 3300037312 Bacteria 21164
136 Ga0395900_0020827 3300037418 Bacteria 6701
137 Ga0395900_0051763 3300037418 Bacteria 4229
138 Ga0436364_1435297 3300037853 Bacteria 74939
139 Ga0395901_0003710 3300038443 Bacteria 15397
140 Ga0436365_0856496 3300039437 Bacteria 3388
141 Ga0466965_0014011 3300044683 Bacteria 3791
142 Ga0466966_0084475 3300044684 Bacteria 1974
143 Ga0466961_0078260 3300044693 Bacteria 2094
144 Ga0466963_0008853 3300044694 Bacteria 6040
145 Ga0466971_0034370 3300044719 Bacteria 2272
146 Ga0466970_0000017 3300044765 Bacteria 64907
147 Ga0466970_0008173 3300044765 Bacteria 5254
148 Ga0466970_0058511 3300044765 Bacteria 2063
149 Ga0466960_0003401 3300044901 Bacteria 6117
150 Ga0466960_0014209 3300044901 Bacteria 3402
151 Ga0466958_0037667 3300045836 Bacteria 2898
152 Ga0495651_0011117 3300046462 Bacteria 6923
153 Ga0495650_0007532 3300046471 Bacteria 6521
154 Ga0495580_0000618 3300046472 Bacteria 30072
155 Ga0495652_0006755 3300046529 Bacteria 10641
156 Ga0495640_0006494 3300046533 Bacteria 9248
157 Ga0495587_0023939 3300046536 Bacteria 3747
158 Ga0495645_0052936 3300046543 Bacteria 2952
159 Ga0495635_0044400 3300046663 Bacteria 3066
160 Ga0495588_0066433 3300046674 Bacteria 1872
161 Ga0495604_0094393 3300047317 Bacteria 2211
162 Ga0495674_0010039 3300047319 Bacteria 8973
163 Ga0495676_0090607 3300047321 Bacteria 2288
164 Ga0496100_0010132 3300048903 Bacteria 5327
165 Ga0496100_0040590 3300048903 Bacteria 2962
166 Ga0496101_0070036 3300048904 Bacteria 2567
167 Ga0496101_0129474 3300048904 Bacteria 1915
168 Ga0496102_0012724 3300048905 Bacteria 7289
169 Ga0496102_0014536 3300048905 Bacteria 6840
170 Ga0496102_0018318 3300048905 Bacteria 6152
171 Ga0496103_0012823 3300048906 Bacteria 4971
172 Ga0496104_0016274 3300048907 Bacteria 6751
173 Ga0496105_0022328 3300048908 Bacteria 5125
174 Ga0496105_0035263 3300048908 Bacteria 4117
175 Ga0496105_0048787 3300048908 Bacteria 3494
176 Ga0496105_0062104 3300048908 Bacteria 3083
177 Ga0496106_0009254 3300048909 Bacteria 7279
178 Ga0496106_0020422 3300048909 Bacteria 4915
179 Ga0496107_0106817 3300048910 Bacteria 2056
180 Ga0496107_0109802 3300048910 Bacteria 2026
181 Ga0496108_0000003 3300048911 Bacteria 595687
182 Ga0496108_0010571 3300048911 Bacteria 7492
183 Ga0496108_0012845 3300048911 Bacteria 6820
184 Ga0496109_0104765 3300048912 Bacteria 2626
185 Ga0496110_0014179 3300048913 Bacteria 6612
186 Ga0496111_0003259 3300048914 Bacteria 10028
187 Ga0496111_0008759 3300048914 Bacteria 6717
188 Ga0496112_0031779 3300048915 Bacteria 5121
189 Ga0496114_0005205 3300048917 Bacteria 10157
190 Ga0496114_0055287 3300048917 Bacteria 3311
191 Ga0496114_0090635 3300048917 Bacteria 2595
192 Ga0501039_0004635 3300049575 Bacteria 10394
193 Ga0501069_0017892 3300049585 Bacteria 3821
194 nmdc:mga0yw44_6843_c1 3300050492 Bacteria 5547
195 nmdc:mga08y16_46067_c1 3300050511 Bacteria 4567
196 nmdc:mga0n895_17901_c1 3300050512 Bacteria 6545
197 nmdc:mga0rr50_52494_c1 3300050513 Bacteria 3030
198 nmdc:mga08x19_3373_c1 3300050514 Bacteria 9527
199 Ga0500616_0000107 3300053153 Bacteria 153426

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025711 Ga0207696_1010649 Ga0207696_10106494 543
2 3300044683 Ga0466965_0014011 Ga0466965_0014011_991_2835 557
3 3300048910 Ga0496107_0106817 Ga0496107_0106817_41_1795 564
4 3300035725 Ga0373947_0040962 Ga0373947_0040962_738_2549 572
5 3300046543 Ga0495645_0052936 Ga0495645_0052936_833_2644 572
6 3300047319 Ga0495674_0010039 Ga0495674_0010039_1720_3531 572
7 3300047321 Ga0495676_0090607 Ga0495676_0090607_308_2071 573
8 3300014325 Ga0163163_10162947 Ga0163163_101629471 574
9 3300026116 Ga0207674_10081723 Ga0207674_100817233 574
10 3300032002 Ga0307416_100012973 Ga0307416_1000129735 575
11 3300031728 Ga0316578_10021607 Ga0316578_100216072 577
12 3300036712 Ga0316584_0052403 Ga0316584_0052403_174_2006 577
13 3300049575 Ga0501039_0004635 Ga0501039_0004635_5292_7067 579
14 3300005937 Ga0081455_10000832 Ga0081455_1000083218 581
15 iso_pu_bacteria 2721755523 2722884420 581
16 iso_pu_bacteria 2775506901 2776265094 581
17 iso_pu_bacteria 2775506902 2776267995 581
18 iso_pu_bacteria 2775506904 2776281969 581
19 iso_pu_bacteria 2818991439 2819557057 581
20 iso_pu_bacteria 2839138175 2839139356 581
21 iso_pu_bacteria 2842324504 2842326695 581
22 iso_pu_bacteria 2842348783 2842350299 581
23 iso_pu_bacteria 2842454564 2842456928 581
24 iso_pu_bacteria 2855020534 2855023319 581
25 iso_pu_bacteria 2979100975 2979102086 581
26 iso_pu_bacteria 2984509177 2984509967 581
27 iso_pu_bacteria 2984518228 2984519335 581
28 iso_pu_bacteria 2984537506 2984538308 581
29 iso_pu_bacteria 2984587000 2984587975 581
30 iso_pu_bacteria 2984601300 2984605057 581
31 iso_pu_bacteria 8055431914 8055436183 581
32 3300045836 Ga0466958_0037667 Ga0466958_0037667_594_2408 582
33 3300048911 Ga0496108_0000003 Ga0496108_0000003_257168_258949 582
34 3300005338 Ga0068868_100023188 Ga0068868_1000231884 583
35 3300005341 Ga0070691_10010783 Ga0070691_100107834 583
36 3300005345 Ga0070692_10005686 Ga0070692_100056864 583
37 3300005455 Ga0070663_100032110 Ga0070663_1000321101 583
38 3300005614 Ga0068856_100027856 Ga0068856_1000278562 583
39 3300005615 Ga0070702_100000529 Ga0070702_1000005298 583
40 3300005616 Ga0068852_100017002 Ga0068852_1000170022 583
41 3300005617 Ga0068859_100036818 Ga0068859_1000368183 583
42 3300005840 Ga0068870_10010701 Ga0068870_100107013 583
43 3300005983 Ga0081540_1025963 Ga0081540_10259631 583
44 3300006237 Ga0097621_100084890 Ga0097621_1000848902 583
45 3300006852 Ga0075433_10013369 Ga0075433_100133692 583
46 3300006871 Ga0075434_100042825 Ga0075434_1000428252 583
47 3300006914 Ga0075436_100003139 Ga0075436_1000031396 583
48 3300006931 Ga0097620_100036819 Ga0097620_1000368193 583
49 3300007076 Ga0075435_100004112 Ga0075435_1000041122 583
50 3300009094 Ga0111539_10049014 Ga0111539_100490143 583
51 3300009098 Ga0105245_10024109 Ga0105245_100241093 583
52 3300009101 Ga0105247_10053284 Ga0105247_100532841 583
53 3300009545 Ga0105237_10174485 Ga0105237_101744852 583
54 3300011119 Ga0105246_10016730 Ga0105246_100167303 583
55 3300011119 Ga0105246_10017081 Ga0105246_100170812 583
56 3300013100 Ga0157373_10059516 Ga0157373_100595162 583
57 3300014745 Ga0157377_10010980 Ga0157377_100109802 583
58 3300014745 Ga0157377_10036690 Ga0157377_100366902 583
59 3300025321 Ga0207656_10015016 Ga0207656_100150162 583
60 3300025901 Ga0207688_10001434 Ga0207688_100014344 583
61 3300025901 Ga0207688_10002490 Ga0207688_100024905 583
62 3300025907 Ga0207645_10038462 Ga0207645_100384622 583
63 3300025908 Ga0207643_10004552 Ga0207643_100045522 583
64 3300025909 Ga0207705_10018054 Ga0207705_100180544 583
65 3300025911 Ga0207654_10031400 Ga0207654_100314002 583
66 3300025925 Ga0207650_10000704 Ga0207650_100007041 583
67 3300025926 Ga0207659_10012646 Ga0207659_100126462 583
68 3300025933 Ga0207706_10078347 Ga0207706_100783472 583
69 3300025936 Ga0207670_10016710 Ga0207670_100167102 583
70 3300025942 Ga0207689_10006729 Ga0207689_100067298 583
71 3300026023 Ga0207677_10017187 Ga0207677_100171875 583
72 3300026035 Ga0207703_10029225 Ga0207703_100292252 583
73 3300026067 Ga0207678_10000807 Ga0207678_1000080717 583
74 3300026075 Ga0207708_10106714 Ga0207708_101067141 583
75 3300026078 Ga0207702_10002561 Ga0207702_100025618 583
76 3300026078 Ga0207702_10019528 Ga0207702_100195284 583
77 3300026089 Ga0207648_10068088 Ga0207648_100680882 583
78 3300026095 Ga0207676_10003659 Ga0207676_100036598 583
79 3300026116 Ga0207674_10039300 Ga0207674_100393002 583
80 3300026121 Ga0207683_10001553 Ga0207683_100015538 583
81 3300026121 Ga0207683_10107901 Ga0207683_101079012 583
82 3300026142 Ga0207698_10070770 Ga0207698_100707702 583
83 3300027907 Ga0207428_10004456 Ga0207428_1000445610 583
84 3300048903 Ga0496100_0010132 Ga0496100_0010132_2146_3957 583
85 3300048905 Ga0496102_0012724 Ga0496102_0012724_4635_6422 583
86 3300048905 Ga0496102_0018318 Ga0496102_0018318_2360_4171 583
87 3300048908 Ga0496105_0035263 Ga0496105_0035263_43_1854 583
88 3300048909 Ga0496106_0009254 Ga0496106_0009254_2524_4335 583
89 3300048911 Ga0496108_0010571 Ga0496108_0010571_4194_5981 583
90 3300048911 Ga0496108_0012845 Ga0496108_0012845_2477_4288 583
91 3300048914 Ga0496111_0003259 Ga0496111_0003259_6991_8802 583
92 3300048915 Ga0496112_0031779 Ga0496112_0031779_2147_3958 583
93 3300050514 nmdc:mga08x19_3373_c1 nmdc:mga08x19_3373_c1_253_2040 583
94 iso_pu_bacteria 8002392321 8002395962 583
95 3300044684 Ga0466966_0084475 Ga0466966_0084475_95_1918 584
96 3300048903 Ga0496100_0040590 Ga0496100_0040590_275_2122 584
97 3300048908 Ga0496105_0048787 Ga0496105_0048787_771_2618 584
98 3300003856 Ga0058692_1001100 Ga0058692_10011009 585
99 3300006946 Ga0079104_1000004 Ga0079104_1000004153 585
100 3300009092 Ga0105250_10001880 Ga0105250_100018802 585
101 3300009176 Ga0105242_10007127 Ga0105242_100071279 585
102 3300025934 Ga0207686_10002569 Ga0207686_100025696 585
103 3300025935 Ga0207709_10000019 Ga0207709_10000019256 585
104 3300027111 Ga0209281_1000005 Ga0209281_1000005354 585
105 3300027312 Ga0209371_1000003 Ga0209371_1000003930 585
106 3300027312 Ga0209371_1000792 Ga0209371_100079221 585
107 3300030500 Ga0268256_1000004 Ga0268256_1000004122 585
108 3300046471 Ga0495650_0007532 Ga0495650_0007532_4696_6498 585
109 3300046472 Ga0495580_0000618 Ga0495580_0000618_56_1858 585
110 3300037418 Ga0395900_0020827 Ga0395900_0020827_1119_2936 586
111 iso_pu_bacteria 2816332139 2816511077 587
112 3300005466 Ga0070685_10033872 Ga0070685_100338722 588
113 3300005539 Ga0068853_100142195 Ga0068853_1001421951 588
114 3300005615 Ga0070702_100027092 Ga0070702_1000270923 588
115 3300009094 Ga0111539_10204271 Ga0111539_102042711 588
116 3300009148 Ga0105243_10117787 Ga0105243_101177871 588
117 3300021388 Ga0213875_10000604 Ga0213875_1000060423 588
118 3300026075 Ga0207708_10019855 Ga0207708_100198556 588
119 3300037418 Ga0395900_0051763 Ga0395900_0051763_218_2041 588
120 3300037853 Ga0436364_1435297 Ga0436364_1435297_1992_3818 588
121 3300005459 Ga0068867_100133107 Ga0068867_1001331071 589
122 3300005471 Ga0070698_100003959 Ga0070698_10000395911 589
123 3300021384 Ga0213876_10023247 Ga0213876_100232471 589
124 3300025940 Ga0207691_10060380 Ga0207691_100603802 589
125 3300039437 Ga0436365_0856496 Ga0436365_0856496_1118_2944 589
126 3300044719 Ga0466971_0034370 Ga0466971_0034370_412_2259 589
127 iso_pu_bacteria 2643221561 2643827873 589
128 iso_pu_bacteria 2643221617 2644102270 589
129 iso_pu_bacteria 2643221620 2644115494 589
130 iso_pu_bacteria 2643221696 2644532359 589
131 iso_pu_bacteria 2738541305 2738871773 589
132 iso_pu_bacteria 2773857762 2774391768 589
133 iso_pu_bacteria 2795385470 2795785262 589
134 iso_pu_bacteria 2808606439 2809197433 589
135 iso_pu_bacteria 2811994878 2812352334 589
136 3300005347 Ga0070668_100027857 Ga0070668_1000278574 590
137 3300005355 Ga0070671_100001367 Ga0070671_1000013674 590
138 3300005548 Ga0070665_100003950 Ga0070665_1000039503 590
139 3300005843 Ga0068860_100102223 Ga0068860_1001022231 590
140 3300025931 Ga0207644_10068591 Ga0207644_100685911 590
141 3300026088 Ga0207641_10023153 Ga0207641_100231535 590
142 3300028379 Ga0268266_10037477 Ga0268266_100374773 590
143 3300028381 Ga0268264_10004745 Ga0268264_100047451 590
144 iso_pu_bacteria 2585427649 2586060359 590
145 iso_pu_bacteria 2643221576 2643891607 590
146 iso_pu_bacteria 2643221590 2643960655 590
147 iso_pu_bacteria 2643221604 2644035828 590
148 iso_pu_bacteria 2808606522 2809590662 590
149 iso_pu_bacteria 2866612099 2866613362 590
150 iso_pu_bacteria 2915768154 2915770596 590
151 iso_pu_bacteria 2917736166 2917737021 590
152 3300005441 Ga0070700_100015726 Ga0070700_1000157264 591
153 3300005578 Ga0068854_100088067 Ga0068854_1000880672 591
154 3300005618 Ga0068864_100038790 Ga0068864_1000387902 591
155 3300006847 Ga0075431_100122488 Ga0075431_1001224881 591
156 3300006852 Ga0075433_10020445 Ga0075433_100204452 591
157 3300006871 Ga0075434_100040301 Ga0075434_1000403012 591
158 3300007076 Ga0075435_100105092 Ga0075435_1001050921 591
159 3300009094 Ga0111539_10036550 Ga0111539_100365502 591
160 3300009147 Ga0114129_10161338 Ga0114129_101613381 591
161 3300026075 Ga0207708_10001212 Ga0207708_1000121213 591
162 3300027907 Ga0207428_10069525 Ga0207428_100695252 591
163 3300044765 Ga0466970_0058511 Ga0466970_0058511_133_1956 591
164 3300050511 nmdc:mga08y16_46067_c1 nmdc:mga08y16_46067_c1_1205_3016 591
165 3300050512 nmdc:mga0n895_17901_c1 nmdc:mga0n895_17901_c1_834_2645 591
166 3300050513 nmdc:mga0rr50_52494_c1 nmdc:mga0rr50_52494_c1_142_1953 591
167 iso_pu_bacteria 2811994874 2812333209 591
168 3300005337 Ga0070682_100011546 Ga0070682_1000115463 592
169 3300005337 Ga0070682_100067881 Ga0070682_1000678812 592
170 3300005338 Ga0068868_100030220 Ga0068868_1000302203 592
171 3300005341 Ga0070691_10018071 Ga0070691_100180712 592
172 3300005356 Ga0070674_100058938 Ga0070674_1000589382 592
173 3300005441 Ga0070700_100027966 Ga0070700_1000279662 592
174 3300005441 Ga0070700_100028426 Ga0070700_1000284262 592
175 3300005459 Ga0068867_100016295 Ga0068867_1000162953 592
176 3300005535 Ga0070684_100016162 Ga0070684_1000161622 592
177 3300005841 Ga0068863_100110770 Ga0068863_1001107702 592
178 3300005843 Ga0068860_100130350 Ga0068860_1001303502 592
179 3300006237 Ga0097621_100042160 Ga0097621_1000421602 592
180 3300006358 Ga0068871_100023816 Ga0068871_1000238163 592
181 3300009094 Ga0111539_10092758 Ga0111539_100927582 592
182 3300009098 Ga0105245_10100810 Ga0105245_101008102 592
183 3300013308 Ga0157375_10172644 Ga0157375_101726442 592
184 3300014968 Ga0157379_10007183 Ga0157379_100071836 592
185 3300025904 Ga0207647_10014956 Ga0207647_100149562 592
186 3300025908 Ga0207643_10003693 Ga0207643_100036936 592
187 3300025915 Ga0207693_10008551 Ga0207693_100085512 592
188 3300025938 Ga0207704_10010259 Ga0207704_100102593 592
189 3300025939 Ga0207665_10011413 Ga0207665_100114132 592
190 3300025940 Ga0207691_10010117 Ga0207691_100101177 592
191 3300026023 Ga0207677_10045193 Ga0207677_100451932 592
192 3300026067 Ga0207678_10012320 Ga0207678_100123203 592
193 3300026075 Ga0207708_10005069 Ga0207708_100050695 592
194 3300026078 Ga0207702_10094368 Ga0207702_100943681 592
195 3300026089 Ga0207648_10003947 Ga0207648_100039474 592
196 3300031903 Ga0307407_10022016 Ga0307407_100220162 592
197 3300031995 Ga0307409_100005888 Ga0307409_1000058882 592
198 3300035086 Ga0373934_0014681 Ga0373934_0014681_108_1931 592
199 3300038443 Ga0395901_0003710 Ga0395901_0003710_11564_13387 592
200 3300046462 Ga0495651_0011117 Ga0495651_0011117_2703_4526 592
201 3300046529 Ga0495652_0006755 Ga0495652_0006755_3696_5519 592
202 3300046533 Ga0495640_0006494 Ga0495640_0006494_3813_5636 592
203 3300046536 Ga0495587_0023939 Ga0495587_0023939_1067_2890 592
204 3300046663 Ga0495635_0044400 Ga0495635_0044400_1192_3015 592
205 3300047317 Ga0495604_0094393 Ga0495604_0094393_70_1893 592
206 3300048907 Ga0496104_0016274 Ga0496104_0016274_4444_6267 592
207 3300048908 Ga0496105_0062104 Ga0496105_0062104_782_2605 592
208 3300048913 Ga0496110_0014179 Ga0496110_0014179_3481_5304 592
209 3300048914 Ga0496111_0008759 Ga0496111_0008759_1824_3647 592
210 iso_pu_bacteria 2842134933 2842135129 592
211 iso_pu_bacteria 2902810491 2902811467 592
212 iso_pu_bacteria 2904765812 2904767949 592
213 iso_pu_bacteria 2904770941 2904774279 592
214 iso_pu_bacteria 2908811453 2908813595 592
215 iso_pu_bacteria 2919420072 2919423622 592
216 iso_pu_bacteria 2919432681 2919436230 592
217 iso_pu_bacteria 2990256926 2990257378 592
218 3300044765 Ga0466970_0008173 Ga0466970_0008173_1517_3367 593
219 3300049585 Ga0501069_0017892 Ga0501069_0017892_1977_3794 593
220 3300026078 Ga0207702_10007178 Ga0207702_100071784 594
221 3300031838 Ga0307518_10000653 Ga0307518_1000065315 594
222 3300044693 Ga0466961_0078260 Ga0466961_0078260_43_1860 594
223 3300044694 Ga0466963_0008853 Ga0466963_0008853_1766_3583 594
224 3300048904 Ga0496101_0129474 Ga0496101_0129474_68_1888 594
225 3300048906 Ga0496103_0012823 Ga0496103_0012823_2374_4194 594
226 3300048909 Ga0496106_0020422 Ga0496106_0020422_2999_4819 594
227 3300048910 Ga0496107_0109802 Ga0496107_0109802_188_2008 594
228 3300048912 Ga0496109_0104765 Ga0496109_0104765_392_2212 594
229 3300050492 nmdc:mga0yw44_6843_c1 nmdc:mga0yw44_6843_c1_2336_4165 594
230 3300044765 Ga0466970_0000017 Ga0466970_0000017_33131_34972 595
231 3300046674 Ga0495588_0066433 Ga0495588_0066433_35_1858 595
232 3300053153 Ga0500616_0000107 Ga0500616_0000107_54543_56363 595
233 iso_pu_bacteria 2565956761 2566991821 595
234 iso_pu_bacteria 2904535858 2904540511 595
235 iso_pu_bacteria 2922554459 2922554595 595
236 iso_pu_bacteria 2738541308 2738891678 596
237 3300000549 LJQas_1001546 LJQas_10015462 598
238 3300032002 Ga0307416_100027260 Ga0307416_1000272602 598
239 3300032004 Ga0307414_10017358 Ga0307414_100173583 598
240 3300037312 Ga0395899_0001340 Ga0395899_0001340_12142_14007 598
241 3300044901 Ga0466960_0003401 Ga0466960_0003401_103_1932 598
242 3300044901 Ga0466960_0014209 Ga0466960_0014209_54_1883 598
243 3300048904 Ga0496101_0070036 Ga0496101_0070036_165_2012 598
244 3300048905 Ga0496102_0014536 Ga0496102_0014536_2575_4422 598
245 3300048908 Ga0496105_0022328 Ga0496105_0022328_1892_3754 598
246 3300048917 Ga0496114_0005205 Ga0496114_0005205_2272_4134 598
247 3300048917 Ga0496114_0055287 Ga0496114_0055287_670_2577 598
248 3300048917 Ga0496114_0090635 Ga0496114_0090635_469_2316 598

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

206

261

0.89

PF00743

FMO-like

Flavin-binding monooxygenase-like

239

416

0.88

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

205

437

0.81

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

202

431

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
1i8t-assembly1.cif.gz_B structure of udp-galactopyranose mutase from e.coli 0.9565 165 198
8acs-assembly2.cif.gz_B crystal structure of fmo from janthinobacterium svalbardensis 0.9504 16 598
8acs-assembly1.cif.gz_C crystal structure of fmo from janthinobacterium svalbardensis 0.9498 16 598
8acs-assembly2.cif.gz_D crystal structure of fmo from janthinobacterium svalbardensis 0.9492 16 598
4mo2-assembly1.cif.gz_B-2 crystal structure of udp-n-acetylgalactopyranose mutase from campylobacter jejuni 0.9488 165 198
ID Description Score Start End Superfamily
af_A0A1D6HY89_22_259_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9434 167 362 3.50.50.60
af_A0A1X7YIW8_1_251_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9388 165 515 3.50.50.60
1xdwA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9342 330 359 3.40.50.720
2eklA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9283 328 359 3.40.50.720
3phgA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9262 330 361 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A529SP67-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9699 178 371 GO:0004499
GO:0050660
GO:0050661
AF-A0A7S3W9Y9-F1-model_v4 Flavin-containing monooxygenase 0.9651 171 338 GO:0004499
GO:0050660
GO:0050661
AF-A0A529SP67-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9603 178 371 GO:0004499
GO:0050660
GO:0050661
AF-A0A531L3I9-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.951 26 372 GO:0004497
GO:0050660
AF-A0A7S3W9Y9-F1-model_v4 Flavin-containing monooxygenase 0.9486 171 338 GO:0004499
GO:0050660
GO:0050661

Feature Viewer

pLDDT pTM Quality
83.01 0.85 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map