F360293
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 248 | 165 | 496 | 422 |
Family's Representative Sequence
| Representative Sequence | 3300053092|Ga0500583_0000120|Ga0500583_0000120_16643_18073 |
| Length | 476 |
| Sequence | VHLFIYNIFLILYSFGIRITALWNPKARLWLKGRKNIWVELQGIRDAEGRTAGTRNTKRPIRTPKINGQNAEGEVSNAVPEGGRTQNPEPETQNPKLVWMHCSSLGEFEQGRPVLEAIRQQYPDSRILLTFFSPSGYEVRKNNSGADYVMYLPLDSKANVRKFLNIVQPDLAIWIKYEYWYYYLTELKKRHIPLLLVSGIFRKDQPFFKWYGRLHWYMLESFNHLFVQTPASKQLLGTIGFTNNVSISGDTRFDRVVQIAEQFKPIDVITQFCGDSTVIVAGSTWPEDEEELDHYANTHPEIKFIIAPHEIDEDHLKSIEKLFKYSVRFSKLPLSNSPVPVPRNRPLETEKRPPNTLIIDNIGMLSKLYKYATITYVGGGFGDDGVHNVLEAAVYGKPVVFGPVYEKYVEAVDLEQEGGALVINTALELEETLNELLTDTTFYQVSCQSARNYVYNNKGATEKIMQYIQENRLLTN |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 2 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 3 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 4 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 5 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 6 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 7 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 8 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 9 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 10 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 11 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 12 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 15 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 17 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 18 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 22 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 25 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 27 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 31 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 32 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 33 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 34 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 35 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 36 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 37 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 38 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 39 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 40 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 42 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 64 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 67 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 69 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 71 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 75 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 107 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 108 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 109 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 110 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 111 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 112 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 113 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 114 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 115 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 116 | 3300041511 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG | Metagenome | Unclassified |
| 117 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 118 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 119 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 120 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 121 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 122 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 123 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 124 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 125 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 126 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 134 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300049703 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control | Metagenome | Rhizosphere |
| 143 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 144 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 146 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 147 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 150 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 151 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 152 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 153 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 154 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 155 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 156 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 157 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 158 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 159 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 160 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 161 | 2818991460 | Chitinophaga polysaccharea 1209 | Isolate | Unclassified |
| 162 | 2821136567 | Chitinophaga sancti 1232 | Isolate | Unclassified |
| 163 | 2904467357 | Chitinophaga sancti 3198 | Isolate | Unclassified |
| 164 | 2929177148 | Chitinophaga sp. R-72269 Hybrid assembly | Isolate | Unclassified |
| 165 | 2946013367 | Chitinophaga sp. W3I9 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.18 |
| Metatranscriptomes | 0 |
| Isolates | 2.82 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 15.73 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 74.19 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 10.08 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0500583_0000120 | 3300053092 | Bacteria | 37819 |
| 2 | JGI25153J46596_10017550 | 3300003215 | Bacteria | 2815 |
| 3 | rootH1_10012273 | 3300003316 | Bacteria | 4360 |
| 4 | rootH1_10162563 | 3300003316 | Bacteria | 4356 |
| 5 | rootH2_10017760 | 3300003320 | Bacteria | 10169 |
| 6 | rootH2_10067129 | 3300003320 | Bacteria | 28673 |
| 7 | rootH2_10098337 | 3300003320 | Bacteria | 2169 |
| 8 | rootH2_10113989 | 3300003320 | Bacteria | 3455 |
| 9 | rootH1_10027127 | 3300003323 | Bacteria | 41560 |
| 10 | rootH1_10043692 | 3300003323 | Bacteria | 17024 |
| 11 | JGI25160J50197_1003289 | 3300003354 | Bacteria | 7276 |
| 12 | JGI25160J50197_1008297 | 3300003354 | Bacteria | 3966 |
| 13 | Ga0055526_1015505 | 3300003771 | Bacteria | 3057 |
| 14 | Ga0055528_1000308 | 3300003790 | Bacteria | 41407 |
| 15 | Ga0055528_1000809 | 3300003790 | Bacteria | 21549 |
| 16 | Ga0055530_10000385 | 3300003791 | Bacteria | 39749 |
| 17 | Ga0065165_1000053 | 3300005262 | Bacteria | 189081 |
| 18 | Ga0065165_1004556 | 3300005262 | Bacteria | 8464 |
| 19 | Ga0065712_10070505 | 3300005290 | Bacteria | 5942 |
| 20 | Ga0070690_100075622 | 3300005330 | Bacteria | 2195 |
| 21 | Ga0070670_100068080 | 3300005331 | Bacteria | 3055 |
| 22 | Ga0068869_100067682 | 3300005334 | Unclassified | 2636 |
| 23 | Ga0070666_10000536 | 3300005335 | Bacteria | 22907 |
| 24 | Ga0070666_10010512 | 3300005335 | Bacteria | 5791 |
| 25 | Ga0068868_100006435 | 3300005338 | Bacteria | 8312 |
| 26 | Ga0068868_100113367 | 3300005338 | Bacteria | 2204 |
| 27 | Ga0070689_100073789 | 3300005340 | Bacteria | 2669 |
| 28 | Ga0070675_100017651 | 3300005354 | Bacteria | 5675 |
| 29 | Ga0070674_100039279 | 3300005356 | Unclassified | 3195 |
| 30 | Ga0070673_100004723 | 3300005364 | Bacteria | 8650 |
| 31 | Ga0070673_100063032 | 3300005364 | Unclassified | 2948 |
| 32 | Ga0070688_100157818 | 3300005365 | Unclassified | 1556 |
| 33 | Ga0070701_10084388 | 3300005438 | Unclassified | 1727 |
| 34 | Ga0070684_100007426 | 3300005535 | Bacteria | 8518 |
| 35 | Ga0068853_100052563 | 3300005539 | Unclassified | 3509 |
| 36 | Ga0070672_100025969 | 3300005543 | Bacteria | 4351 |
| 37 | Ga0070686_100069549 | 3300005544 | Bacteria | 2299 |
| 38 | Ga0070665_100000008 | 3300005548 | Bacteria | 606341 |
| 39 | Ga0068855_100006607 | 3300005563 | Bacteria | 14090 |
| 40 | Ga0068855_100015945 | 3300005563 | Bacteria | 9037 |
| 41 | Ga0070664_100042128 | 3300005564 | Bacteria | 3854 |
| 42 | Ga0068857_100024321 | 3300005577 | Bacteria | 5331 |
| 43 | Ga0068857_100053179 | 3300005577 | Bacteria | 3593 |
| 44 | Ga0068856_100078413 | 3300005614 | Unclassified | 3275 |
| 45 | Ga0068852_100000180 | 3300005616 | Bacteria | 43078 |
| 46 | Ga0068859_100000007 | 3300005617 | Bacteria | 390070 |
| 47 | Ga0068859_100001403 | 3300005617 | Bacteria | 24458 |
| 48 | Ga0068864_100001316 | 3300005618 | Bacteria | 20650 |
| 49 | Ga0068863_100000444 | 3300005841 | Bacteria | 41977 |
| 50 | Ga0068858_100000829 | 3300005842 | Bacteria | 32222 |
| 51 | Ga0068858_100327948 | 3300005842 | Unclassified | 1464 |
| 52 | Ga0068860_100000029 | 3300005843 | Bacteria | 259192 |
| 53 | Ga0068860_100018174 | 3300005843 | Bacteria | 6844 |
| 54 | Ga0068860_100024948 | 3300005843 | Bacteria | 5771 |
| 55 | Ga0068860_100026695 | 3300005843 | Bacteria | 5566 |
| 56 | Ga0081540_1010761 | 3300005983 | Bacteria | 6156 |
| 57 | Ga0075366_10027870 | 3300006195 | Bacteria | 3315 |
| 58 | Ga0097621_100012629 | 3300006237 | Bacteria | 6268 |
| 59 | Ga0097621_100033462 | 3300006237 | Bacteria | 4094 |
| 60 | Ga0068871_100020023 | 3300006358 | Bacteria | 5119 |
| 61 | Ga0097620_100000007 | 3300006931 | Bacteria | 390070 |
| 62 | Ga0097620_100001403 | 3300006931 | Bacteria | 24458 |
| 63 | Ga0105240_10003982 | 3300009093 | Bacteria | 22790 |
| 64 | Ga0105240_10047995 | 3300009093 | Bacteria | 5399 |
| 65 | Ga0105240_10083925 | 3300009093 | Unclassified | 3907 |
| 66 | Ga0105240_10108611 | 3300009093 | Bacteria | 3361 |
| 67 | Ga0105240_10110580 | 3300009093 | Bacteria | 3326 |
| 68 | Ga0105240_10219410 | 3300009093 | Unclassified | 2217 |
| 69 | Ga0111539_10270245 | 3300009094 | Bacteria | 1979 |
| 70 | Ga0111539_10351395 | 3300009094 | Unclassified | 1716 |
| 71 | Ga0105247_10021089 | 3300009101 | Bacteria | 3919 |
| 72 | Ga0114129_10005196 | 3300009147 | Bacteria | 18339 |
| 73 | Ga0105241_10001098 | 3300009174 | Bacteria | 20609 |
| 74 | Ga0105241_10013783 | 3300009174 | Bacteria | 5922 |
| 75 | Ga0105241_10083867 | 3300009174 | Unclassified | 2501 |
| 76 | Ga0105237_10000780 | 3300009545 | Bacteria | 43609 |
| 77 | Ga0105237_10077525 | 3300009545 | Bacteria | 3313 |
| 78 | Ga0105237_10086923 | 3300009545 | Unclassified | 3117 |
| 79 | Ga0105238_10003171 | 3300009551 | Bacteria | 16392 |
| 80 | Ga0105238_10032669 | 3300009551 | Bacteria | 5296 |
| 81 | Ga0105238_10037294 | 3300009551 | Bacteria | 4941 |
| 82 | Ga0105238_10056683 | 3300009551 | Bacteria | 3931 |
| 83 | Ga0105249_10014005 | 3300009553 | Bacteria | 7089 |
| 84 | Ga0105239_10000135 | 3300010375 | Bacteria | 103223 |
| 85 | Ga0105239_10000337 | 3300010375 | Bacteria | 68698 |
| 86 | Ga0105239_10009606 | 3300010375 | Bacteria | 10882 |
| 87 | Ga0105239_10011821 | 3300010375 | Bacteria | 9742 |
| 88 | Ga0105239_10222351 | 3300010375 | Bacteria | 2117 |
| 89 | Ga0105246_10261178 | 3300011119 | Bacteria | 1380 |
| 90 | Ga0157373_10048519 | 3300013100 | Bacteria | 3027 |
| 91 | Ga0157370_10030890 | 3300013104 | Bacteria | 5246 |
| 92 | Ga0157369_10014091 | 3300013105 | Bacteria | 9036 |
| 93 | Ga0157369_10040227 | 3300013105 | Bacteria | 5105 |
| 94 | Ga0157374_10049158 | 3300013296 | Bacteria | 3917 |
| 95 | Ga0157374_10171851 | 3300013296 | Bacteria | 2114 |
| 96 | Ga0157378_10000837 | 3300013297 | Bacteria | 28570 |
| 97 | Ga0163162_10000795 | 3300013306 | Bacteria | 29353 |
| 98 | Ga0163162_10008664 | 3300013306 | Bacteria | 9901 |
| 99 | Ga0163162_10346918 | 3300013306 | Unclassified | 1617 |
| 100 | Ga0157372_10000258 | 3300013307 | Bacteria | 58520 |
| 101 | Ga0157372_10002260 | 3300013307 | Bacteria | 20878 |
| 102 | Ga0157372_10011005 | 3300013307 | Bacteria | 9628 |
| 103 | Ga0157372_10158379 | 3300013307 | Unclassified | 2616 |
| 104 | Ga0157375_10026705 | 3300013308 | Bacteria | 5386 |
| 105 | Ga0157375_10057461 | 3300013308 | Unclassified | 3846 |
| 106 | Ga0157375_10070266 | 3300013308 | Unclassified | 3511 |
| 107 | Ga0157380_10057217 | 3300014326 | Bacteria | 3104 |
| 108 | Ga0157379_10155525 | 3300014968 | Bacteria | 2063 |
| 109 | Ga0182005_1000081 | 3300015265 | Bacteria | 73899 |
| 110 | Ga0209436_100566 | 3300025208 | Bacteria | 15905 |
| 111 | Ga0209258_100041 | 3300025242 | Bacteria | 381381 |
| 112 | Ga0209646_1002181 | 3300025246 | Bacteria | 4528 |
| 113 | Ga0209148_1000090 | 3300025254 | Bacteria | 250982 |
| 114 | Ga0209673_1000034 | 3300025273 | Bacteria | 328788 |
| 115 | Ga0209130_1001027 | 3300025284 | Bacteria | 21399 |
| 116 | Ga0209564_1022953 | 3300025295 | Bacteria | 2185 |
| 117 | Ga0209564_1034363 | 3300025295 | Bacteria | 1488 |
| 118 | Ga0209758_1014477 | 3300025297 | Bacteria | 4190 |
| 119 | Ga0209758_1020661 | 3300025297 | Bacteria | 3102 |
| 120 | Ga0209050_1000353 | 3300025298 | Bacteria | 88509 |
| 121 | Ga0207426_1000177 | 3300025302 | Bacteria | 159426 |
| 122 | Ga0207426_1000592 | 3300025302 | Bacteria | 47901 |
| 123 | Ga0207426_1043531 | 3300025302 | Bacteria | 1378 |
| 124 | Ga0209257_1002086 | 3300025304 | Bacteria | 21027 |
| 125 | Ga0207656_10068605 | 3300025321 | Bacteria | 1571 |
| 126 | Ga0207710_10017175 | 3300025900 | Bacteria | 3067 |
| 127 | Ga0207680_10000067 | 3300025903 | Bacteria | 46002 |
| 128 | Ga0207680_10068723 | 3300025903 | Unclassified | 2187 |
| 129 | Ga0207647_10005595 | 3300025904 | Bacteria | 9181 |
| 130 | Ga0207654_10000661 | 3300025911 | Bacteria | 19557 |
| 131 | Ga0207707_10119442 | 3300025912 | Unclassified | 2304 |
| 132 | Ga0207695_10000445 | 3300025913 | Bacteria | 90509 |
| 133 | Ga0207695_10003973 | 3300025913 | Bacteria | 20423 |
| 134 | Ga0207695_10004873 | 3300025913 | Bacteria | 18099 |
| 135 | Ga0207695_10028507 | 3300025913 | Bacteria | 6190 |
| 136 | Ga0207671_10001466 | 3300025914 | Bacteria | 27257 |
| 137 | Ga0207671_10001776 | 3300025914 | Bacteria | 24234 |
| 138 | Ga0207671_10001778 | 3300025914 | Bacteria | 24205 |
| 139 | Ga0207671_10008365 | 3300025914 | Bacteria | 8783 |
| 140 | Ga0207657_10048087 | 3300025919 | Bacteria | 3725 |
| 141 | Ga0207652_10040645 | 3300025921 | Bacteria | 3950 |
| 142 | Ga0207694_10166257 | 3300025924 | Bacteria | 1784 |
| 143 | Ga0207650_10039104 | 3300025925 | Bacteria | 3466 |
| 144 | Ga0207659_10018400 | 3300025926 | Bacteria | 4581 |
| 145 | Ga0207659_10019887 | 3300025926 | Bacteria | 4428 |
| 146 | Ga0207706_10001156 | 3300025933 | Bacteria | 26853 |
| 147 | Ga0207704_10154052 | 3300025938 | Unclassified | 1626 |
| 148 | Ga0207691_10004566 | 3300025940 | Bacteria | 13407 |
| 149 | Ga0207691_10004949 | 3300025940 | Bacteria | 12848 |
| 150 | Ga0207689_10002959 | 3300025942 | Bacteria | 15685 |
| 151 | Ga0207689_10016883 | 3300025942 | Bacteria | 6176 |
| 152 | Ga0207667_10000100 | 3300025949 | Bacteria | 138482 |
| 153 | Ga0207651_10049868 | 3300025960 | Bacteria | 2839 |
| 154 | Ga0207668_10170590 | 3300025972 | Bacteria | 1706 |
| 155 | Ga0207658_10005017 | 3300025986 | Bacteria | 9121 |
| 156 | Ga0207677_10005993 | 3300026023 | Bacteria | 6623 |
| 157 | Ga0207677_10036911 | 3300026023 | Bacteria | 3189 |
| 158 | Ga0207703_10017680 | 3300026035 | Bacteria | 5567 |
| 159 | Ga0207639_10002436 | 3300026041 | Bacteria | 12511 |
| 160 | Ga0207639_10051314 | 3300026041 | Unclassified | 3137 |
| 161 | Ga0207641_10000090 | 3300026088 | Bacteria | 127735 |
| 162 | Ga0207641_10020789 | 3300026088 | Bacteria | 5394 |
| 163 | Ga0207641_10066455 | 3300026088 | Bacteria | 3086 |
| 164 | Ga0207648_10050695 | 3300026089 | Bacteria | 3629 |
| 165 | Ga0207648_10101139 | 3300026089 | Bacteria | 2526 |
| 166 | Ga0207676_10138053 | 3300026095 | Bacteria | 2083 |
| 167 | Ga0207674_10003443 | 3300026116 | Bacteria | 19359 |
| 168 | Ga0207674_10018575 | 3300026116 | Bacteria | 7551 |
| 169 | Ga0207674_10231179 | 3300026116 | Bacteria | 1797 |
| 170 | Ga0207675_100066296 | 3300026118 | Bacteria | 3374 |
| 171 | Ga0207698_10000108 | 3300026142 | Bacteria | 51893 |
| 172 | Ga0268266_10000016 | 3300028379 | Bacteria | 629101 |
| 173 | Ga0268264_10000072 | 3300028381 | Bacteria | 260791 |
| 174 | Ga0268264_10002720 | 3300028381 | Bacteria | 15431 |
| 175 | Ga0268264_10003011 | 3300028381 | Bacteria | 14612 |
| 176 | Ga0268264_10007515 | 3300028381 | Bacteria | 9093 |
| 177 | Ga0307515_10000078 | 3300028794 | Bacteria | 227988 |
| 178 | Ga0307511_10001896 | 3300030521 | Bacteria | 21954 |
| 179 | Ga0307509_10036817 | 3300031507 | Bacteria | 5354 |
| 180 | Ga0307509_10045284 | 3300031507 | Bacteria | 4746 |
| 181 | Ga0307508_10001912 | 3300031616 | Bacteria | 22869 |
| 182 | Ga0316576_10028682 | 3300031727 | Bacteria | 3926 |
| 183 | Ga0316576_10030421 | 3300031727 | Bacteria | 3824 |
| 184 | Ga0307510_10001712 | 3300033180 | Bacteria | 24371 |
| 185 | Ga0316574_0086885 | 3300035398 | Bacteria | 1991 |
| 186 | Ga0400483_073690 | 3300039062 | Bacteria | 14993 |
| 187 | Ga0400483_233176 | 3300039062 | Bacteria | 26214 |
| 188 | Ga0439436_0006955 | 3300041404 | Bacteria | 3479 |
| 189 | Ga0451855_0376564 | 3300041511 | Unclassified | 3783 |
| 190 | Ga0451577_0025828 | 3300042876 | Bacteria | 5326 |
| 191 | Ga0466972_0000309 | 3300044658 | Bacteria | 28496 |
| 192 | Ga0466972_0008365 | 3300044658 | Bacteria | 5184 |
| 193 | Ga0466972_0051995 | 3300044658 | Bacteria | 1975 |
| 194 | Ga0453683_0012609 | 3300044673 | Bacteria | 5536 |
| 195 | Ga0453683_0062909 | 3300044673 | Unclassified | 2320 |
| 196 | Ga0466965_0031830 | 3300044683 | Bacteria | 2574 |
| 197 | Ga0466966_0000030 | 3300044684 | Bacteria | 103300 |
| 198 | Ga0466961_0034900 | 3300044693 | Bacteria | 3230 |
| 199 | Ga0466971_0009829 | 3300044719 | Bacteria | 4177 |
| 200 | Ga0466957_0011478 | 3300044842 | Bacteria | 5113 |
| 201 | Ga0466959_0000269 | 3300045049 | Bacteria | 31896 |
| 202 | Ga0466959_0002150 | 3300045049 | Bacteria | 12505 |
| 203 | Ga0495638_0017086 | 3300046460 | Bacteria | 4846 |
| 204 | Ga0495606_0004456 | 3300046507 | Bacteria | 13980 |
| 205 | Ga0495648_0011969 | 3300046524 | Bacteria | 6504 |
| 206 | Ga0495611_0000011 | 3300046648 | Bacteria | 146643 |
| 207 | Ga0495611_0013841 | 3300046648 | Bacteria | 3440 |
| 208 | Ga0495625_0064244 | 3300046660 | Bacteria | 2590 |
| 209 | Ga0495687_000004 | 3300047443 | Bacteria | 779298 |
| 210 | Ga0495686_0000165 | 3300047472 | Bacteria | 125611 |
| 211 | Ga0496121_0000030 | 3300048924 | Bacteria | 412079 |
| 212 | Ga0501032_0005352 | 3300049569 | Bacteria | 9547 |
| 213 | Ga0501034_0009826 | 3300049571 | Bacteria | 10003 |
| 214 | Ga0501036_0028950 | 3300049572 | Bacteria | 4681 |
| 215 | Ga0501037_0004568 | 3300049573 | Bacteria | 10064 |
| 216 | Ga0501038_0009375 | 3300049574 | Bacteria | 8980 |
| 217 | Ga0501039_0069294 | 3300049575 | Bacteria | 2739 |
| 218 | Ga0501043_0030975 | 3300049579 | Bacteria | 4206 |
| 219 | Ga0501043_0170219 | 3300049579 | Unclassified | 1699 |
| 220 | Ga0501047_0048805 | 3300049581 | Bacteria | 4087 |
| 221 | Ga0501047_0057440 | 3300049581 | Bacteria | 3763 |
| 222 | Ga0501219_000812 | 3300049703 | Bacteria | 4068 |
| 223 | Ga0501225_0002530 | 3300049705 | Bacteria | 5650 |
| 224 | Ga0501035_0034157 | 3300049822 | Bacteria | 4622 |
| 225 | Ga0501044_0004625 | 3300049823 | Bacteria | 15403 |
| 226 | nmdc:mga0k408_18789_c1 | 3300050493 | Bacteria | 3859 |
| 227 | nmdc:mga05p37_3553_c1 | 3300050507 | Bacteria | 18203 |
| 228 | nmdc:mga08y16_401257_c1 | 3300050511 | Unclassified | 1403 |
| 229 | Ga0500578_0000120 | 3300053086 | Bacteria | 95463 |
| 230 | Ga0500578_0036454 | 3300053086 | Bacteria | 3159 |
| 231 | Ga0500644_0000182 | 3300053088 | Bacteria | 40141 |
| 232 | Ga0500646_0017101 | 3300053090 | Bacteria | 1898 |
| 233 | Ga0500583_0006739 | 3300053092 | Bacteria | 3981 |
| 234 | Ga0500555_032923 | 3300053103 | Bacteria | 1463 |
| 235 | Ga0500569_000517 | 3300053109 | Bacteria | 6437 |
| 236 | Ga0500559_0003554 | 3300053136 | Bacteria | 7625 |
| 237 | Ga0500577_0003098 | 3300053142 | Bacteria | 4304 |
| 238 | Ga0500616_0007492 | 3300053153 | Bacteria | 6924 |
| 239 | Ga0500622_0002131 | 3300053156 | Bacteria | 14740 |
| 240 | Ga0500636_0007397 | 3300053177 | Bacteria | 6354 |
| 241 | Ga0500636_0040858 | 3300053177 | Bacteria | 2743 |
| 242 | 2738731493 | 2738541278 | Bacteria | 9755573 |
| 243 | 2819573236 | 2818991442 | Bacteria | 8318214 |
| 244 | 2819681932 | 2818991460 | Bacteria | 7595395 |
| 245 | 2821136656 | 2821136567 | Bacteria | 8080116 |
| 246 | 2904468599 | 2904467357 | Bacteria | 8057758 |
| 247 | 2929178512 | 2929177148 | Bacteria | 7883697 |
| 248 | 2946019686 | 2946013367 | Bacteria | 7766675 |
| 249 | Ga0500583_0000120 | |||
| 250 | JGI25153J46596_10017550 | |||
| 251 | rootH1_10012273 | |||
| 252 | rootH1_10162563 | |||
| 253 | rootH2_10017760 | |||
| 254 | rootH2_10067129 | |||
| 255 | rootH2_10098337 | |||
| 256 | rootH2_10113989 | |||
| 257 | rootH1_10027127 | |||
| 258 | rootH1_10043692 | |||
| 259 | JGI25160J50197_1003289 | |||
| 260 | JGI25160J50197_1008297 | |||
| 261 | Ga0055526_1015505 | |||
| 262 | Ga0055528_1000308 | |||
| 263 | Ga0055528_1000809 | |||
| 264 | Ga0055530_10000385 | |||
| 265 | Ga0065165_1000053 | |||
| 266 | Ga0065165_1004556 | |||
| 267 | Ga0065712_10070505 | |||
| 268 | Ga0070690_100075622 | |||
| 269 | Ga0070670_100068080 | |||
| 270 | Ga0068869_100067682 | |||
| 271 | Ga0070666_10000536 | |||
| 272 | Ga0070666_10010512 | |||
| 273 | Ga0068868_100006435 | |||
| 274 | Ga0068868_100113367 | |||
| 275 | Ga0070689_100073789 | |||
| 276 | Ga0070675_100017651 | |||
| 277 | Ga0070674_100039279 | |||
| 278 | Ga0070673_100004723 | |||
| 279 | Ga0070673_100063032 | |||
| 280 | Ga0070688_100157818 | |||
| 281 | Ga0070701_10084388 | |||
| 282 | Ga0070684_100007426 | |||
| 283 | Ga0068853_100052563 | |||
| 284 | Ga0070672_100025969 | |||
| 285 | Ga0070686_100069549 | |||
| 286 | Ga0070665_100000008 | |||
| 287 | Ga0068855_100006607 | |||
| 288 | Ga0068855_100015945 | |||
| 289 | Ga0070664_100042128 | |||
| 290 | Ga0068857_100024321 | |||
| 291 | Ga0068857_100053179 | |||
| 292 | Ga0068856_100078413 | |||
| 293 | Ga0068852_100000180 | |||
| 294 | Ga0068859_100000007 | |||
| 295 | Ga0068859_100001403 | |||
| 296 | Ga0068864_100001316 | |||
| 297 | Ga0068863_100000444 | |||
| 298 | Ga0068858_100000829 | |||
| 299 | Ga0068858_100327948 | |||
| 300 | Ga0068860_100000029 | |||
| 301 | Ga0068860_100018174 | |||
| 302 | Ga0068860_100024948 | |||
| 303 | Ga0068860_100026695 | |||
| 304 | Ga0081540_1010761 | |||
| 305 | Ga0075366_10027870 | |||
| 306 | Ga0097621_100012629 | |||
| 307 | Ga0097621_100033462 | |||
| 308 | Ga0068871_100020023 | |||
| 309 | Ga0097620_100000007 | |||
| 310 | Ga0097620_100001403 | |||
| 311 | Ga0105240_10003982 | |||
| 312 | Ga0105240_10047995 | |||
| 313 | Ga0105240_10083925 | |||
| 314 | Ga0105240_10108611 | |||
| 315 | Ga0105240_10110580 | |||
| 316 | Ga0105240_10219410 | |||
| 317 | Ga0111539_10270245 | |||
| 318 | Ga0111539_10351395 | |||
| 319 | Ga0105247_10021089 | |||
| 320 | Ga0114129_10005196 | |||
| 321 | Ga0105241_10001098 | |||
| 322 | Ga0105241_10013783 | |||
| 323 | Ga0105241_10083867 | |||
| 324 | Ga0105237_10000780 | |||
| 325 | Ga0105237_10077525 | |||
| 326 | Ga0105237_10086923 | |||
| 327 | Ga0105238_10003171 | |||
| 328 | Ga0105238_10032669 | |||
| 329 | Ga0105238_10037294 | |||
| 330 | Ga0105238_10056683 | |||
| 331 | Ga0105249_10014005 | |||
| 332 | Ga0105239_10000135 | |||
| 333 | Ga0105239_10000337 | |||
| 334 | Ga0105239_10009606 | |||
| 335 | Ga0105239_10011821 | |||
| 336 | Ga0105239_10222351 | |||
| 337 | Ga0105246_10261178 | |||
| 338 | Ga0157373_10048519 | |||
| 339 | Ga0157370_10030890 | |||
| 340 | Ga0157369_10014091 | |||
| 341 | Ga0157369_10040227 | |||
| 342 | Ga0157374_10049158 | |||
| 343 | Ga0157374_10171851 | |||
| 344 | Ga0157378_10000837 | |||
| 345 | Ga0163162_10000795 | |||
| 346 | Ga0163162_10008664 | |||
| 347 | Ga0163162_10346918 | |||
| 348 | Ga0157372_10000258 | |||
| 349 | Ga0157372_10002260 | |||
| 350 | Ga0157372_10011005 | |||
| 351 | Ga0157372_10158379 | |||
| 352 | Ga0157375_10026705 | |||
| 353 | Ga0157375_10057461 | |||
| 354 | Ga0157375_10070266 | |||
| 355 | Ga0157380_10057217 | |||
| 356 | Ga0157379_10155525 | |||
| 357 | Ga0182005_1000081 | |||
| 358 | Ga0209436_100566 | |||
| 359 | Ga0209258_100041 | |||
| 360 | Ga0209646_1002181 | |||
| 361 | Ga0209148_1000090 | |||
| 362 | Ga0209673_1000034 | |||
| 363 | Ga0209130_1001027 | |||
| 364 | Ga0209564_1022953 | |||
| 365 | Ga0209564_1034363 | |||
| 366 | Ga0209758_1014477 | |||
| 367 | Ga0209758_1020661 | |||
| 368 | Ga0209050_1000353 | |||
| 369 | Ga0207426_1000177 | |||
| 370 | Ga0207426_1000592 | |||
| 371 | Ga0207426_1043531 | |||
| 372 | Ga0209257_1002086 | |||
| 373 | Ga0207656_10068605 | |||
| 374 | Ga0207710_10017175 | |||
| 375 | Ga0207680_10000067 | |||
| 376 | Ga0207680_10068723 | |||
| 377 | Ga0207647_10005595 | |||
| 378 | Ga0207654_10000661 | |||
| 379 | Ga0207707_10119442 | |||
| 380 | Ga0207695_10000445 | |||
| 381 | Ga0207695_10003973 | |||
| 382 | Ga0207695_10004873 | |||
| 383 | Ga0207695_10028507 | |||
| 384 | Ga0207671_10001466 | |||
| 385 | Ga0207671_10001776 | |||
| 386 | Ga0207671_10001778 | |||
| 387 | Ga0207671_10008365 | |||
| 388 | Ga0207657_10048087 | |||
| 389 | Ga0207652_10040645 | |||
| 390 | Ga0207694_10166257 | |||
| 391 | Ga0207650_10039104 | |||
| 392 | Ga0207659_10018400 | |||
| 393 | Ga0207659_10019887 | |||
| 394 | Ga0207706_10001156 | |||
| 395 | Ga0207704_10154052 | |||
| 396 | Ga0207691_10004566 | |||
| 397 | Ga0207691_10004949 | |||
| 398 | Ga0207689_10002959 | |||
| 399 | Ga0207689_10016883 | |||
| 400 | Ga0207667_10000100 | |||
| 401 | Ga0207651_10049868 | |||
| 402 | Ga0207668_10170590 | |||
| 403 | Ga0207658_10005017 | |||
| 404 | Ga0207677_10005993 | |||
| 405 | Ga0207677_10036911 | |||
| 406 | Ga0207703_10017680 | |||
| 407 | Ga0207639_10002436 | |||
| 408 | Ga0207639_10051314 | |||
| 409 | Ga0207641_10000090 | |||
| 410 | Ga0207641_10020789 | |||
| 411 | Ga0207641_10066455 | |||
| 412 | Ga0207648_10050695 | |||
| 413 | Ga0207648_10101139 | |||
| 414 | Ga0207676_10138053 | |||
| 415 | Ga0207674_10003443 | |||
| 416 | Ga0207674_10018575 | |||
| 417 | Ga0207674_10231179 | |||
| 418 | Ga0207675_100066296 | |||
| 419 | Ga0207698_10000108 | |||
| 420 | Ga0268266_10000016 | |||
| 421 | Ga0268264_10000072 | |||
| 422 | Ga0268264_10002720 | |||
| 423 | Ga0268264_10003011 | |||
| 424 | Ga0268264_10007515 | |||
| 425 | Ga0307515_10000078 | |||
| 426 | Ga0307511_10001896 | |||
| 427 | Ga0307509_10036817 | |||
| 428 | Ga0307509_10045284 | |||
| 429 | Ga0307508_10001912 | |||
| 430 | Ga0316576_10028682 | |||
| 431 | Ga0316576_10030421 | |||
| 432 | Ga0307510_10001712 | |||
| 433 | Ga0316574_0086885 | |||
| 434 | Ga0400483_073690 | |||
| 435 | Ga0400483_233176 | |||
| 436 | Ga0439436_0006955 | |||
| 437 | Ga0451855_0376564 | |||
| 438 | Ga0451577_0025828 | |||
| 439 | Ga0466972_0000309 | |||
| 440 | Ga0466972_0008365 | |||
| 441 | Ga0466972_0051995 | |||
| 442 | Ga0453683_0012609 | |||
| 443 | Ga0453683_0062909 | |||
| 444 | Ga0466965_0031830 | |||
| 445 | Ga0466966_0000030 | |||
| 446 | Ga0466961_0034900 | |||
| 447 | Ga0466971_0009829 | |||
| 448 | Ga0466957_0011478 | |||
| 449 | Ga0466959_0000269 | |||
| 450 | Ga0466959_0002150 | |||
| 451 | Ga0495638_0017086 | |||
| 452 | Ga0495606_0004456 | |||
| 453 | Ga0495648_0011969 | |||
| 454 | Ga0495611_0000011 | |||
| 455 | Ga0495611_0013841 | |||
| 456 | Ga0495625_0064244 | |||
| 457 | Ga0495687_000004 | |||
| 458 | Ga0495686_0000165 | |||
| 459 | Ga0496121_0000030 | |||
| 460 | Ga0501032_0005352 | |||
| 461 | Ga0501034_0009826 | |||
| 462 | Ga0501036_0028950 | |||
| 463 | Ga0501037_0004568 | |||
| 464 | Ga0501038_0009375 | |||
| 465 | Ga0501039_0069294 | |||
| 466 | Ga0501043_0030975 | |||
| 467 | Ga0501043_0170219 | |||
| 468 | Ga0501047_0048805 | |||
| 469 | Ga0501047_0057440 | |||
| 470 | Ga0501219_000812 | |||
| 471 | Ga0501225_0002530 | |||
| 472 | Ga0501035_0034157 | |||
| 473 | Ga0501044_0004625 | |||
| 474 | nmdc:mga0k408_18789_c1 | |||
| 475 | nmdc:mga05p37_3553_c1 | |||
| 476 | nmdc:mga08y16_401257_c1 | |||
| 477 | Ga0500578_0000120 | |||
| 478 | Ga0500578_0036454 | |||
| 479 | Ga0500644_0000182 | |||
| 480 | Ga0500646_0017101 | |||
| 481 | Ga0500583_0006739 | |||
| 482 | Ga0500555_032923 | |||
| 483 | Ga0500569_000517 | |||
| 484 | Ga0500559_0003554 | |||
| 485 | Ga0500577_0003098 | |||
| 486 | Ga0500616_0007492 | |||
| 487 | Ga0500622_0002131 | |||
| 488 | Ga0500636_0007397 | |||
| 489 | Ga0500636_0040858 | |||
| 490 | 2738731493 | |||
| 491 | 2819573236 | |||
| 492 | 2819681932 | |||
| 493 | 2821136656 | |||
| 494 | 2904468599 | |||
| 495 | 2929178512 | |||
| 496 | 2946019686 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2xci-assembly1.cif.gz_A | membrane-embedded monofunctional glycosyltransferase waaa of aquifex aeolicus, substrate-free form | 0.7861 | 43 | 422 |
| 4bfc-assembly1.cif.gz_A | crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii | 0.7629 | 209 | 407 |
| 2xci-assembly1.cif.gz_A | membrane-embedded monofunctional glycosyltransferase waaa of aquifex aeolicus, substrate-free form | 0.7442 | 43 | 422 |
| 4bfc-assembly1.cif.gz_A | crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii | 0.7375 | 209 | 407 |
| 6vlc-assembly1.cif.gz_B | crystal structure of udp-glcnac 2-epimerase from neisseria meningitidis bound to udp-glcnac | 0.711 | 53 | 422 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0AC75_41_209_3.40.50.11720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain | 0.9136 | 51 | 208 | 3.40.50.11720 |
| af_A0A1D6L6D3_126_238_3.40.50.11720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain | 0.9056 | 51 | 149 | 3.40.50.11720 |
| af_A0A0P0VAM2_51_200_3.40.50.11720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain | 0.8984 | 48 | 182 | 3.40.50.11720 |
| af_A0A1D6N6V1_47_223_3.40.50.11720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain | 0.8978 | 48 | 208 | 3.40.50.11720 |
| 2xciD01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain | 0.8794 | 42 | 209 | 3.40.50.11720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3C0IDU3-F1-model_v4 | 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) | 0.9885 | 4 | 218 |
GO:0005886
GO:0009244 GO:0009245 GO:0043842 |
| AF-A0A836SXN7-F1-model_v4 | 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) | 0.981 | 5 | 269 |
GO:0005886
GO:0009244 GO:0009245 GO:0016740 |
| AF-A0A519SBQ6-F1-model_v4 | 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) | 0.9808 | 4 | 149 |
GO:0005886
GO:0009244 GO:0009245 GO:0043842 |
| AF-A0A4Q6AGN0-F1-model_v4 | 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) | 0.9784 | 1 | 187 |
GO:0005886
GO:0009244 GO:0009245 GO:0043842 |
| AF-A0A519SLN1-F1-model_v4 | 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) | 0.977 | 4 | 134 |
GO:0005886
GO:0009244 GO:0009245 GO:0016740 |