F360339
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 248 | 185 | 496 | 743 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2904434214|2904437109 |
| Length | 806 |
| Sequence | GLASALILACTIGLESSAVLALPSFDTVRQDWHSADWTLLARDGTPLQRTRVDFTARRGDWVALSDVSPALLQAIVVSEDRRFYAHGGVDWRGAVGAAWANLWNTRTRGASTVTMQLAGLLDDDRRHAGRRTWTDKADQAWEALQLERHWRKDQILEAYLNLVPFRGETIGLDALSRTLFGKAPAGLDAREAAIAAALVRAPNAAPSKVYARACVILKDMDATANCTVLDGDPALYRNGVTQTSWQTTRIGMAGNDNVSGRNAASDLALHFARRIAVEVHPAAGARVRSTLDAGLQRFARDALQRVLIELNTPGQARHVQDGAVVVIDNASGEIRAWVGSSGALSAAGEVDTVMALRQAGSTLKPFLFAQAIDENRLNAASLLDDSPLDIAAGGGLYIPQNYDKHFKGWVSVRSALGGSLNVPAVRTLMLVTPHRFAKTLRGLGLPLTEEGDYYGYSLALGSADVTLLTLANAYRALANGGQFTPTRDLPAVMHETANATAASAPRRVSDIARNGGTIQTGTRSLPESKRIFSPAASYIITDILADNNARVRTFGLDSVLNTRGFSAVKTGTSKDMRDNWAVGFTSRYTIGVWVGNADGSPMWDVSGVTGAAPVWAAIAAYLGHRAPSMAPPPPADTERRRITYVPGIEPTRSEWFLRGTGVDTIRLSTLAQSNAKTHAASNAANARSQIMGGAANGGALPPRRDVNGPLAISAPADGTIFALDPDIPPPNQRIWFEQGDAPDTRASWRLDGRIVGTGTRVAWSPWPGRHKVQLIDARGRVADTIAFEVRGAFASVPEPHDTRNRR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 2 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 3 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 4 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 5 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 6 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 7 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 8 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 10 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 11 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 19 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 20 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 21 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 22 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 23 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 24 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300016635 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 | Metagenome | Rhizosphere |
| 35 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 36 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 41 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 42 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 43 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 46 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 48 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 65 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 67 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 68 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 69 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 70 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 71 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 72 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 73 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 74 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 75 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 76 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 77 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 78 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 79 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 80 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 81 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 82 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 83 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 84 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 85 | 3300042010 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 | Metagenome | Rhizosphere |
| 86 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 87 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 88 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 89 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 90 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 91 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 92 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 93 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 94 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 95 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 96 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 97 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 98 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 99 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 100 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 101 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 102 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 119 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 120 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 121 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 122 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 123 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 124 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 125 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 126 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 127 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 129 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 130 | 2904434214 | Robbsia andropogonis 1567 | Isolate | Rhizosphere |
| 131 | 2501025501 | Paraburkholderia silvatlantica PVA5 | Isolate | Unclassified |
| 132 | 2501025502 | Paraburkholderia unamae MTI-641 | Isolate | Rhizosphere |
| 133 | 2501025504 | Paraburkholderia silvatlantica SRMrh-20 | Isolate | Unclassified |
| 134 | 2510917013 | Paraburkholderia unamae MTI-641 | Isolate | Rhizosphere |
| 135 | 2510917014 | Paraburkholderia silvatlantica SRMrh-20 | Isolate | Unclassified |
| 136 | 2510917015 | Paraburkholderia silvatlantica PVA5 | Isolate | Unclassified |
| 137 | 2513237082 | Paraburkholderia mimosarum STM3621 | Isolate | Nodule |
| 138 | 2513237083 | Paraburkholderia mimosarum LMG 23256 | Isolate | Nodule |
| 139 | 2513237166 | Paraburkholderia azotifigens UYPR1.413 | Isolate | Nodule |
| 140 | 2515154189 | Paraburkholderia nodosa DSM 21604 | Isolate | Unclassified |
| 141 | 2519103095 | Burkholderia sp. KJ006 | Isolate | Nodule |
| 142 | 2562617112 | Burkholderia sp. BT03 | Isolate | Rhizosphere |
| 143 | 2582581311 | Burkholderia sp. WP42 | Isolate | Rhizosphere |
| 144 | 2599185239 | Burkholderia sp. NFACC38-1 | Isolate | Rhizoplane |
| 145 | 2599185240 | Burkholderia sp. NFPP32 | Isolate | Rhizoplane |
| 146 | 2599185355 | Burkholderia sp. NFACC33-1 | Isolate | Rhizoplane |
| 147 | 2600255067 | Paraburkholderia kururiensis thiooxydans NBRC 107107 | Isolate | Unclassified |
| 148 | 2675903129 | Burkholderia pyrrocinia NFIX32 | Isolate | Rhizoplane |
| 149 | 2711768613 | Burkholderia sp. BT03 | Isolate | Rhizosphere |
| 150 | 2791355137 | Paraburkholderia piptadeniae STM7183 | Isolate | Unclassified |
| 151 | 2808606384 | Burkholderia sp. SJZ089 | Isolate | Rhizosphere |
| 152 | 2808606386 | Herbaspirillum sp. SJZ099 | Isolate | Rhizosphere |
| 153 | 2808606390 | Burkholderia sp. SJZ115 | Isolate | Rhizosphere |
| 154 | 2808606391 | Burkholderia sp. SJZ091 | Isolate | Rhizosphere |
| 155 | 2808606415 | Herbaspirillum sp. SJZ130 | Isolate | Rhizosphere |
| 156 | 2808606419 | Herbaspirillum sp. SJZ106 | Isolate | Rhizosphere |
| 157 | 2816332253 | Burkholderia vietnamiensis HI2297 | Isolate | Unclassified |
| 158 | 2816332256 | Burkholderia vietnamiensis MSMB608WGS | Isolate | Unclassified |
| 159 | 2816332286 | Burkholderia vietnamiensis HI2221 | Isolate | Rhizosphere |
| 160 | 2818991452 | Burkholderia cepacia 561 | Isolate | Unclassified |
| 161 | 2852618963 | Herbaspirillum sp. SJZ102 | Isolate | Rhizosphere |
| 162 | 2863421361 | Burkholderia cenocepacia CACua-24 | Isolate | Rhizosphere |
| 163 | 2870068957 | Burkholderia sp. JP2-270 | Isolate | Unclassified |
| 164 | 2883087390 | Paraburkholderia guartelaensis CNPSo 3008 | Isolate | Unclassified |
| 165 | 2885192300 | Variovorax sp. MHTC-1 | Isolate | Rhizosphere |
| 166 | 2904564687 | Burkholderia sp. 571 | Isolate | Unclassified |
| 167 | 2904571731 | Burkholderia cenocepacia 574 | Isolate | Unclassified |
| 168 | 2904615490 | Paraburkholderia franconis CNPSo 3157 | Isolate | Unclassified |
| 169 | 2928157003 | Burkholderia ambifaria 566 | Isolate | Unclassified |
| 170 | 2928163908 | Burkholderia sp. 567 | Isolate | Unclassified |
| 171 | 2928170801 | Burkholderia sp. 572 | Isolate | Unclassified |
| 172 | 2928536128 | Burkholderia sola 565 | Isolate | Unclassified |
| 173 | 2981990288 | Burkholderia sp. PvR073 | Isolate | Rhizosphere |
| 174 | 641736154 | Burkholderia ambifaria IOP40-10 | Isolate | Rhizosphere |
| 175 | 642555112 | Paraburkholderia phymatum STM815 | Isolate | Nodule |
| 176 | 8003955200 | Paraburkholderia mimosarum LMG 23256 | Isolate | Nodule |
| 177 | 8018845410 | Burkholderia reimsis BE51 | Isolate | Rhizosphere |
| 178 | 8020807995 | Burkholderia sp. B10 | Isolate | Rhizosphere |
| 179 | 8020938398 | Burkholderia sp. BE12 | Isolate | Rhizosphere |
| 180 | 8020945358 | Burkholderia sp. BE17 | Isolate | Rhizosphere |
| 181 | 8020953355 | Burkholderia sp. BE24 | Isolate | Rhizosphere |
| 182 | 8021120328 | Burkholderia sp. LS-044 | Isolate | Rhizosphere |
| 183 | 8039098773 | Burkholderia multivorans MSMB612WGS | Isolate | Unclassified |
| 184 | 8040167225 | Burkholderia vietnamiensis RS1 | Isolate | Unclassified |
| 185 | 8040173305 | Burkholderia vietnamiensis BE10 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 77.02 |
| Metatranscriptomes | 0.4 |
| Isolates | 22.58 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 16.94 |
| Nodule | 2.42 |
| Rhizoplane | 4.03 |
| Rhizosphere | 63.31 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25160J50197_1000256 | 3300003354 | Bacteria | 40310 |
| 2 | Ga0055539_1000317 | 3300003752 | Bacteria | 25090 |
| 3 | Ga0055533_1000028 | 3300003756 | Bacteria | 311012 |
| 4 | Ga0055533_1000057 | 3300003756 | Bacteria | 194035 |
| 5 | Ga0055532_1000279 | 3300003758 | Bacteria | 33170 |
| 6 | Ga0055532_1000924 | 3300003758 | Bacteria | 9504 |
| 7 | Ga0055532_1001213 | 3300003758 | Bacteria | 7633 |
| 8 | Ga0055527_1000167 | 3300003760 | Bacteria | 45193 |
| 9 | Ga0055527_1000195 | 3300003760 | Bacteria | 40416 |
| 10 | Ga0055535_1000382 | 3300003761 | Bacteria | 41904 |
| 11 | Ga0055535_1000409 | 3300003761 | Bacteria | 40416 |
| 12 | Ga0055535_1000438 | 3300003761 | Bacteria | 38493 |
| 13 | Ga0055542_1000408 | 3300003762 | Bacteria | 41982 |
| 14 | Ga0055542_1002026 | 3300003762 | Bacteria | 7757 |
| 15 | Ga0055529_1000331 | 3300003763 | Bacteria | 53202 |
| 16 | Ga0055529_1000436 | 3300003763 | Bacteria | 41951 |
| 17 | Ga0055528_1006520 | 3300003790 | Bacteria | 5287 |
| 18 | Ga0065165_1000475 | 3300005262 | Bacteria | 62656 |
| 19 | Ga0070658_10049982 | 3300005327 | Bacteria | 3388 |
| 20 | Ga0070660_100000013 | 3300005339 | Bacteria | 116814 |
| 21 | Ga0070660_100000290 | 3300005339 | Bacteria | 33464 |
| 22 | Ga0070668_100003573 | 3300005347 | Bacteria | 11469 |
| 23 | Ga0070673_100029546 | 3300005364 | Bacteria | 4089 |
| 24 | Ga0070659_100000028 | 3300005366 | Bacteria | 140665 |
| 25 | Ga0070667_100008623 | 3300005367 | Bacteria | 8450 |
| 26 | Ga0070663_100000587 | 3300005455 | Bacteria | 19410 |
| 27 | Ga0068855_100050049 | 3300005563 | Bacteria | 4925 |
| 28 | Ga0068863_100017357 | 3300005841 | Bacteria | 6901 |
| 29 | Ga0068863_100053073 | 3300005841 | Bacteria | 3841 |
| 30 | Ga0068858_100015269 | 3300005842 | Bacteria | 7227 |
| 31 | Ga0068858_100085463 | 3300005842 | Bacteria | 2935 |
| 32 | Ga0068862_100047586 | 3300005844 | Bacteria | 3660 |
| 33 | Ga0075428_100005505 | 3300006844 | Bacteria | 14079 |
| 34 | Ga0075429_100007650 | 3300006880 | Bacteria | 9382 |
| 35 | Ga0105240_10001816 | 3300009093 | Bacteria | 35855 |
| 36 | Ga0105240_10007956 | 3300009093 | Bacteria | 15295 |
| 37 | Ga0105240_10106353 | 3300009093 | Bacteria | 3403 |
| 38 | Ga0111539_10001080 | 3300009094 | Bacteria | 36018 |
| 39 | Ga0105237_10006677 | 3300009545 | Bacteria | 12753 |
| 40 | Ga0105237_10016614 | 3300009545 | Bacteria | 7645 |
| 41 | Ga0105237_10027222 | 3300009545 | Bacteria | 5838 |
| 42 | Ga0105238_10020953 | 3300009551 | Bacteria | 6660 |
| 43 | Ga0105239_10000892 | 3300010375 | Bacteria | 42342 |
| 44 | Ga0105239_10013777 | 3300010375 | Bacteria | 8975 |
| 45 | Ga0157373_10006356 | 3300013100 | Bacteria | 8825 |
| 46 | Ga0157371_10005249 | 3300013102 | Bacteria | 10997 |
| 47 | Ga0157370_10002011 | 3300013104 | Bacteria | 24984 |
| 48 | Ga0157369_10000178 | 3300013105 | Bacteria | 89141 |
| 49 | Ga0157369_10000320 | 3300013105 | Bacteria | 64393 |
| 50 | Ga0157369_10003910 | 3300013105 | Bacteria | 17670 |
| 51 | Ga0157374_10000088 | 3300013296 | Bacteria | 90553 |
| 52 | Ga0183361_10013 | 3300016635 | Bacteria | 179680 |
| 53 | Ga0206353_11405390 | 3300020082 | Bacteria | 6205 |
| 54 | Ga0209566_100311 | 3300025225 | Bacteria | 43965 |
| 55 | Ga0209674_100007 | 3300025226 | Bacteria | 1077082 |
| 56 | Ga0209674_101837 | 3300025226 | Bacteria | 5060 |
| 57 | Ga0209672_100067 | 3300025228 | Bacteria | 180819 |
| 58 | Ga0209672_100079 | 3300025228 | Bacteria | 156875 |
| 59 | Ga0209672_100349 | 3300025228 | Bacteria | 29490 |
| 60 | Ga0209147_100012 | 3300025229 | Bacteria | 681990 |
| 61 | Ga0209147_100061 | 3300025229 | Bacteria | 248809 |
| 62 | Ga0209147_100107 | 3300025229 | Bacteria | 156875 |
| 63 | Ga0209563_100033 | 3300025230 | Bacteria | 457883 |
| 64 | Ga0207427_101191 | 3300025231 | Bacteria | 10117 |
| 65 | Ga0209258_100107 | 3300025242 | Bacteria | 206572 |
| 66 | Ga0209258_100273 | 3300025242 | Bacteria | 87726 |
| 67 | Ga0209258_100353 | 3300025242 | Bacteria | 63996 |
| 68 | Ga0209677_100132 | 3300025253 | Bacteria | 72060 |
| 69 | Ga0209148_1000022 | 3300025254 | Bacteria | 681990 |
| 70 | Ga0209148_1000675 | 3300025254 | Bacteria | 28619 |
| 71 | Ga0209759_1001229 | 3300025256 | Bacteria | 15673 |
| 72 | Ga0209759_1001692 | 3300025256 | Bacteria | 11474 |
| 73 | Ga0209455_1000024 | 3300025272 | Bacteria | 676133 |
| 74 | Ga0209455_1000136 | 3300025272 | Bacteria | 146375 |
| 75 | Ga0209455_1000300 | 3300025272 | Bacteria | 51031 |
| 76 | Ga0209673_1000021 | 3300025273 | Bacteria | 422978 |
| 77 | Ga0207426_1000050 | 3300025302 | Bacteria | 393022 |
| 78 | Ga0209051_1000987 | 3300025303 | Bacteria | 27532 |
| 79 | Ga0207647_10000819 | 3300025904 | Bacteria | 24170 |
| 80 | Ga0207647_10047344 | 3300025904 | Bacteria | 2675 |
| 81 | Ga0207705_10000502 | 3300025909 | Bacteria | 33234 |
| 82 | Ga0207705_10022084 | 3300025909 | Bacteria | 4540 |
| 83 | Ga0207705_10061128 | 3300025909 | Bacteria | 2721 |
| 84 | Ga0207695_10000255 | 3300025913 | Bacteria | 136470 |
| 85 | Ga0207695_10008192 | 3300025913 | Bacteria | 13129 |
| 86 | Ga0207695_10014052 | 3300025913 | Bacteria | 9507 |
| 87 | Ga0207671_10021291 | 3300025914 | Bacteria | 4920 |
| 88 | Ga0207657_10000017 | 3300025919 | Bacteria | 173373 |
| 89 | Ga0207657_10000593 | 3300025919 | Bacteria | 38361 |
| 90 | Ga0207657_10011045 | 3300025919 | Bacteria | 8977 |
| 91 | Ga0207690_10000009 | 3300025932 | Bacteria | 366044 |
| 92 | Ga0207691_10006270 | 3300025940 | Bacteria | 11482 |
| 93 | Ga0207667_10003845 | 3300025949 | Bacteria | 18462 |
| 94 | Ga0207667_10012768 | 3300025949 | Bacteria | 9647 |
| 95 | Ga0207667_10028116 | 3300025949 | Bacteria | 6108 |
| 96 | Ga0207668_10007202 | 3300025972 | Bacteria | 6607 |
| 97 | Ga0207658_10030484 | 3300025986 | Bacteria | 3819 |
| 98 | Ga0207658_10044025 | 3300025986 | Bacteria | 3249 |
| 99 | Ga0207678_10000597 | 3300026067 | Bacteria | 33081 |
| 100 | Ga0207678_10073434 | 3300026067 | Bacteria | 2931 |
| 101 | Ga0207648_10017544 | 3300026089 | Bacteria | 6505 |
| 102 | Ga0207675_100018635 | 3300026118 | Bacteria | 6478 |
| 103 | Ga0207675_100028495 | 3300026118 | Bacteria | 5199 |
| 104 | Ga0209371_1000573 | 3300027312 | Bacteria | 33272 |
| 105 | Ga0207428_10008673 | 3300027907 | Bacteria | 9181 |
| 106 | Ga0268266_10022651 | 3300028379 | Bacteria | 5348 |
| 107 | Ga0265336_10000012 | 3300028666 | Bacteria | 261478 |
| 108 | Ga0265336_10001021 | 3300028666 | Bacteria | 13744 |
| 109 | Ga0265324_10000006 | 3300029957 | Bacteria | 267048 |
| 110 | Ga0265324_10000753 | 3300029957 | Bacteria | 21463 |
| 111 | Ga0265324_10001855 | 3300029957 | Bacteria | 11426 |
| 112 | Ga0268256_1000502 | 3300030500 | Bacteria | 33098 |
| 113 | Ga0265325_10000608 | 3300031241 | Bacteria | 26127 |
| 114 | Ga0265314_10000397 | 3300031711 | Bacteria | 59137 |
| 115 | Ga0265314_10012334 | 3300031711 | Bacteria | 6980 |
| 116 | Ga0307516_10007080 | 3300031730 | Bacteria | 12966 |
| 117 | Ga0373927_0005016 | 3300035695 | Bacteria | 9167 |
| 118 | Ga0395899_0000005 | 3300037312 | Bacteria | 772966 |
| 119 | Ga0395899_0033571 | 3300037312 | Bacteria | 3853 |
| 120 | Ga0395900_0000003 | 3300037418 | Bacteria | 587648 |
| 121 | Ga0395900_0000089 | 3300037418 | Bacteria | 170012 |
| 122 | Ga0395900_0037165 | 3300037418 | Bacteria | 5022 |
| 123 | Ga0395898_0000003 | 3300037466 | Bacteria | 772986 |
| 124 | Ga0395898_0001270 | 3300037466 | Bacteria | 37354 |
| 125 | Ga0395898_0071695 | 3300037466 | Bacteria | 3347 |
| 126 | Ga0395905_0000041 | 3300037471 | Bacteria | 250958 |
| 127 | Ga0395901_0000012 | 3300038443 | Bacteria | 381361 |
| 128 | Ga0395901_0000038 | 3300038443 | Bacteria | 210534 |
| 129 | Ga0395901_0000965 | 3300038443 | Bacteria | 31264 |
| 130 | Ga0395901_0018570 | 3300038443 | Bacteria | 7101 |
| 131 | Ga0395901_0023677 | 3300038443 | Bacteria | 6296 |
| 132 | Ga0439466_0001978 | 3300041411 | Bacteria | 8035 |
| 133 | Ga0439465_0005368 | 3300041413 | Bacteria | 4087 |
| 134 | Ga0439431_0001007 | 3300041997 | Bacteria | 6123 |
| 135 | Ga0439445_0000167 | 3300042004 | Bacteria | 11641 |
| 136 | Ga0439448_0000286 | 3300042005 | Bacteria | 11108 |
| 137 | Ga0439432_002873 | 3300042006 | Bacteria | 6419 |
| 138 | Ga0439449_0001138 | 3300042007 | Bacteria | 10441 |
| 139 | Ga0439452_001715 | 3300042010 | Bacteria | 8595 |
| 140 | Ga0439457_002711 | 3300042014 | Bacteria | 4984 |
| 141 | Ga0439462_0004081 | 3300042015 | Bacteria | 3546 |
| 142 | Ga0439446_0005664 | 3300042156 | Bacteria | 3220 |
| 143 | Ga0439434_0000712 | 3300042435 | Bacteria | 9583 |
| 144 | Ga0451577_0000080 | 3300042876 | Bacteria | 218034 |
| 145 | Ga0466969_0007357 | 3300044656 | Bacteria | 5852 |
| 146 | Ga0466972_0005766 | 3300044658 | Bacteria | 6204 |
| 147 | Ga0453683_0000049 | 3300044673 | Bacteria | 206697 |
| 148 | Ga0466966_0000060 | 3300044684 | Bacteria | 79613 |
| 149 | Ga0466966_0001236 | 3300044684 | Bacteria | 16380 |
| 150 | Ga0466966_0002359 | 3300044684 | Bacteria | 12333 |
| 151 | Ga0466961_0000632 | 3300044693 | Bacteria | 22031 |
| 152 | Ga0466961_0042618 | 3300044693 | Bacteria | 2909 |
| 153 | Ga0466964_0007902 | 3300044706 | Bacteria | 3983 |
| 154 | Ga0453684_0000286 | 3300044712 | Bacteria | 218034 |
| 155 | Ga0466971_0009810 | 3300044719 | Bacteria | 4179 |
| 156 | Ga0466957_0029266 | 3300044842 | Bacteria | 3283 |
| 157 | Ga0466959_0016968 | 3300045049 | Bacteria | 5329 |
| 158 | Ga0451576_0000102 | 3300045051 | Bacteria | 218034 |
| 159 | Ga0495629_0000480 | 3300046459 | Bacteria | 33539 |
| 160 | Ga0495580_0009301 | 3300046472 | Bacteria | 7732 |
| 161 | Ga0495580_0023047 | 3300046472 | Bacteria | 4577 |
| 162 | Ga0495605_0000856 | 3300046474 | Bacteria | 21163 |
| 163 | Ga0495583_0000017 | 3300046506 | Bacteria | 310888 |
| 164 | Ga0495606_0000606 | 3300046507 | Bacteria | 56734 |
| 165 | Ga0495628_0002389 | 3300046516 | Bacteria | 16932 |
| 166 | Ga0495665_0031393 | 3300046531 | Bacteria | 2843 |
| 167 | Ga0495646_0051102 | 3300046680 | Bacteria | 2503 |
| 168 | Ga0495613_0018885 | 3300046689 | Bacteria | 5136 |
| 169 | Ga0495649_0001268 | 3300046694 | Bacteria | 19452 |
| 170 | Ga0495581_0001540 | 3300047315 | Bacteria | 12859 |
| 171 | Ga0495674_0053153 | 3300047319 | Bacteria | 3562 |
| 172 | Ga0495672_0001250 | 3300047320 | Bacteria | 25523 |
| 173 | Ga0495672_0022821 | 3300047320 | Bacteria | 4061 |
| 174 | Ga0495686_0000042 | 3300047472 | Bacteria | 293968 |
| 175 | Ga0496100_0000318 | 3300048903 | Bacteria | 23765 |
| 176 | Ga0496101_0000824 | 3300048904 | Bacteria | 18247 |
| 177 | Ga0496102_0009404 | 3300048905 | Bacteria | 8397 |
| 178 | Ga0496103_0002030 | 3300048906 | Bacteria | 13003 |
| 179 | Ga0496106_0000029 | 3300048909 | Bacteria | 141097 |
| 180 | Ga0496114_0012152 | 3300048917 | Bacteria | 6889 |
| 181 | Ga0496117_0003187 | 3300048920 | Bacteria | 19484 |
| 182 | Ga0496117_0017409 | 3300048920 | Bacteria | 5999 |
| 183 | Ga0496118_0003922 | 3300048921 | Bacteria | 18208 |
| 184 | Ga0496118_0005354 | 3300048921 | Bacteria | 14609 |
| 185 | Ga0496121_0016387 | 3300048924 | Bacteria | 7657 |
| 186 | Ga0496121_0018534 | 3300048924 | Bacteria | 7012 |
| 187 | Ga0496125_0077936 | 3300048928 | Bacteria | 2551 |
| 188 | Ga0496126_0000192 | 3300048929 | Bacteria | 136536 |
| 189 | Ga0496126_0000374 | 3300048929 | Bacteria | 92435 |
| 190 | Ga0501031_0006296 | 3300049568 | Bacteria | 7736 |
| 191 | Ga0500556_0000137 | 3300053104 | Bacteria | 61134 |
| 192 | Ga0466962_0005841 | 3300061719 | Bacteria | 5914 |
| 193 | 2904437109 | 2904434214 | Bacteria | 6230908 |
| 194 | 2501072401 | 2501025501 | Bacteria | 7768574 |
| 195 | 2501080124 | 2501025502 | Bacteria | 9641094 |
| 196 | 2501412411 | 2501025504 | Bacteria | 8008976 |
| 197 | 2511088001 | 2510917013 | Bacteria | 9951648 |
| 198 | 2511101452 | 2510917014 | Bacteria | 8296963 |
| 199 | 2511107945 | 2510917015 | Bacteria | 7950052 |
| 200 | 2513556676 | 2513237082 | Bacteria | 8640282 |
| 201 | 2513560607 | 2513237083 | Bacteria | 8410967 |
| 202 | 2514048105 | 2513237166 | Bacteria | 10373764 |
| 203 | 2516018238 | 2515154189 | Bacteria | 9629850 |
| 204 | 2519461417 | 2519103095 | Bacteria | 6629912 |
| 205 | 2563062984 | 2562617112 | Bacteria | 10918404 |
| 206 | 2585290804 | 2582581311 | Bacteria | 6763856 |
| 207 | 2599734687 | 2599185239 | Bacteria | 8686614 |
| 208 | 2599745426 | 2599185240 | Bacteria | 7968121 |
| 209 | 2600207333 | 2599185355 | Bacteria | 7968906 |
| 210 | 2600812893 | 2600255067 | Bacteria | 6795583 |
| 211 | 2676741146 | 2675903129 | Bacteria | 7964495 |
| 212 | 2713477183 | 2711768613 | Bacteria | 11048459 |
| 213 | 2792836429 | 2791355137 | Bacteria | 9654227 |
| 214 | 2808967507 | 2808606384 | Bacteria | 8474373 |
| 215 | 2808981733 | 2808606386 | Bacteria | 4471946 |
| 216 | 2809002338 | 2808606390 | Bacteria | 8476311 |
| 217 | 2809009615 | 2808606391 | Bacteria | 8308166 |
| 218 | 2809131363 | 2808606415 | Bacteria | 4576710 |
| 219 | 2809150985 | 2808606419 | Bacteria | 4576925 |
| 220 | 2817258322 | 2816332253 | Bacteria | 6764532 |
| 221 | 2817281264 | 2816332256 | Bacteria | 6891714 |
| 222 | 2817452048 | 2816332286 | Bacteria | 6853759 |
| 223 | 2819634489 | 2818991452 | Bacteria | 8442785 |
| 224 | 2852622735 | 2852618963 | Bacteria | 4577824 |
| 225 | 2863422152 | 2863421361 | Bacteria | 7300805 |
| 226 | 2870075281 | 2870068957 | Bacteria | 8925310 |
| 227 | 2883090352 | 2883087390 | Bacteria | 9532701 |
| 228 | 2885195772 | 2885192300 | Bacteria | 5882526 |
| 229 | 2904570608 | 2904564687 | Bacteria | 7609577 |
| 230 | 2904577785 | 2904571731 | Bacteria | 7608790 |
| 231 | 2904617121 | 2904615490 | Bacteria | 10047340 |
| 232 | 2928159049 | 2928157003 | Bacteria | 7522202 |
| 233 | 2928167881 | 2928163908 | Bacteria | 7561269 |
| 234 | 2928175369 | 2928170801 | Bacteria | 8785406 |
| 235 | 2928537941 | 2928536128 | Bacteria | 7657547 |
| 236 | 2981992431 | 2981990288 | Bacteria | 7590678 |
| 237 | 642417087 | 641736154 | Bacteria | 7689995 |
| 238 | 642592717 | 642555112 | Bacteria | 8676562 |
| 239 | 8003958437 | 8003955200 | Bacteria | 8601927 |
| 240 | 8018848489 | 8018845410 | Bacteria | 8933938 |
| 241 | 8020810373 | 8020807995 | Bacteria | 6801506 |
| 242 | 8020941817 | 8020938398 | Bacteria | 7472757 |
| 243 | 8020945621 | 8020945358 | Bacteria | 8467355 |
| 244 | 8020958709 | 8020953355 | Bacteria | 7439080 |
| 245 | 8021121718 | 8021120328 | Bacteria | 8782274 |
| 246 | 8039103973 | 8039098773 | Bacteria | 6602928 |
| 247 | 8040167417 | 8040167225 | Bacteria | 6542727 |
| 248 | 8040175427 | 8040173305 | Bacteria | 6827067 |
| 249 | JGI25160J50197_1000256 | |||
| 250 | Ga0055539_1000317 | |||
| 251 | Ga0055533_1000028 | |||
| 252 | Ga0055533_1000057 | |||
| 253 | Ga0055532_1000279 | |||
| 254 | Ga0055532_1000924 | |||
| 255 | Ga0055532_1001213 | |||
| 256 | Ga0055527_1000167 | |||
| 257 | Ga0055527_1000195 | |||
| 258 | Ga0055535_1000382 | |||
| 259 | Ga0055535_1000409 | |||
| 260 | Ga0055535_1000438 | |||
| 261 | Ga0055542_1000408 | |||
| 262 | Ga0055542_1002026 | |||
| 263 | Ga0055529_1000331 | |||
| 264 | Ga0055529_1000436 | |||
| 265 | Ga0055528_1006520 | |||
| 266 | Ga0065165_1000475 | |||
| 267 | Ga0070658_10049982 | |||
| 268 | Ga0070660_100000013 | |||
| 269 | Ga0070660_100000290 | |||
| 270 | Ga0070668_100003573 | |||
| 271 | Ga0070673_100029546 | |||
| 272 | Ga0070659_100000028 | |||
| 273 | Ga0070667_100008623 | |||
| 274 | Ga0070663_100000587 | |||
| 275 | Ga0068855_100050049 | |||
| 276 | Ga0068863_100017357 | |||
| 277 | Ga0068863_100053073 | |||
| 278 | Ga0068858_100015269 | |||
| 279 | Ga0068858_100085463 | |||
| 280 | Ga0068862_100047586 | |||
| 281 | Ga0075428_100005505 | |||
| 282 | Ga0075429_100007650 | |||
| 283 | Ga0105240_10001816 | |||
| 284 | Ga0105240_10007956 | |||
| 285 | Ga0105240_10106353 | |||
| 286 | Ga0111539_10001080 | |||
| 287 | Ga0105237_10006677 | |||
| 288 | Ga0105237_10016614 | |||
| 289 | Ga0105237_10027222 | |||
| 290 | Ga0105238_10020953 | |||
| 291 | Ga0105239_10000892 | |||
| 292 | Ga0105239_10013777 | |||
| 293 | Ga0157373_10006356 | |||
| 294 | Ga0157371_10005249 | |||
| 295 | Ga0157370_10002011 | |||
| 296 | Ga0157369_10000178 | |||
| 297 | Ga0157369_10000320 | |||
| 298 | Ga0157369_10003910 | |||
| 299 | Ga0157374_10000088 | |||
| 300 | Ga0183361_10013 | |||
| 301 | Ga0206353_11405390 | |||
| 302 | Ga0209566_100311 | |||
| 303 | Ga0209674_100007 | |||
| 304 | Ga0209674_101837 | |||
| 305 | Ga0209672_100067 | |||
| 306 | Ga0209672_100079 | |||
| 307 | Ga0209672_100349 | |||
| 308 | Ga0209147_100012 | |||
| 309 | Ga0209147_100061 | |||
| 310 | Ga0209147_100107 | |||
| 311 | Ga0209563_100033 | |||
| 312 | Ga0207427_101191 | |||
| 313 | Ga0209258_100107 | |||
| 314 | Ga0209258_100273 | |||
| 315 | Ga0209258_100353 | |||
| 316 | Ga0209677_100132 | |||
| 317 | Ga0209148_1000022 | |||
| 318 | Ga0209148_1000675 | |||
| 319 | Ga0209759_1001229 | |||
| 320 | Ga0209759_1001692 | |||
| 321 | Ga0209455_1000024 | |||
| 322 | Ga0209455_1000136 | |||
| 323 | Ga0209455_1000300 | |||
| 324 | Ga0209673_1000021 | |||
| 325 | Ga0207426_1000050 | |||
| 326 | Ga0209051_1000987 | |||
| 327 | Ga0207647_10000819 | |||
| 328 | Ga0207647_10047344 | |||
| 329 | Ga0207705_10000502 | |||
| 330 | Ga0207705_10022084 | |||
| 331 | Ga0207705_10061128 | |||
| 332 | Ga0207695_10000255 | |||
| 333 | Ga0207695_10008192 | |||
| 334 | Ga0207695_10014052 | |||
| 335 | Ga0207671_10021291 | |||
| 336 | Ga0207657_10000017 | |||
| 337 | Ga0207657_10000593 | |||
| 338 | Ga0207657_10011045 | |||
| 339 | Ga0207690_10000009 | |||
| 340 | Ga0207691_10006270 | |||
| 341 | Ga0207667_10003845 | |||
| 342 | Ga0207667_10012768 | |||
| 343 | Ga0207667_10028116 | |||
| 344 | Ga0207668_10007202 | |||
| 345 | Ga0207658_10030484 | |||
| 346 | Ga0207658_10044025 | |||
| 347 | Ga0207678_10000597 | |||
| 348 | Ga0207678_10073434 | |||
| 349 | Ga0207648_10017544 | |||
| 350 | Ga0207675_100018635 | |||
| 351 | Ga0207675_100028495 | |||
| 352 | Ga0209371_1000573 | |||
| 353 | Ga0207428_10008673 | |||
| 354 | Ga0268266_10022651 | |||
| 355 | Ga0265336_10000012 | |||
| 356 | Ga0265336_10001021 | |||
| 357 | Ga0265324_10000006 | |||
| 358 | Ga0265324_10000753 | |||
| 359 | Ga0265324_10001855 | |||
| 360 | Ga0268256_1000502 | |||
| 361 | Ga0265325_10000608 | |||
| 362 | Ga0265314_10000397 | |||
| 363 | Ga0265314_10012334 | |||
| 364 | Ga0307516_10007080 | |||
| 365 | Ga0373927_0005016 | |||
| 366 | Ga0395899_0000005 | |||
| 367 | Ga0395899_0033571 | |||
| 368 | Ga0395900_0000003 | |||
| 369 | Ga0395900_0000089 | |||
| 370 | Ga0395900_0037165 | |||
| 371 | Ga0395898_0000003 | |||
| 372 | Ga0395898_0001270 | |||
| 373 | Ga0395898_0071695 | |||
| 374 | Ga0395905_0000041 | |||
| 375 | Ga0395901_0000012 | |||
| 376 | Ga0395901_0000038 | |||
| 377 | Ga0395901_0000965 | |||
| 378 | Ga0395901_0018570 | |||
| 379 | Ga0395901_0023677 | |||
| 380 | Ga0439466_0001978 | |||
| 381 | Ga0439465_0005368 | |||
| 382 | Ga0439431_0001007 | |||
| 383 | Ga0439445_0000167 | |||
| 384 | Ga0439448_0000286 | |||
| 385 | Ga0439432_002873 | |||
| 386 | Ga0439449_0001138 | |||
| 387 | Ga0439452_001715 | |||
| 388 | Ga0439457_002711 | |||
| 389 | Ga0439462_0004081 | |||
| 390 | Ga0439446_0005664 | |||
| 391 | Ga0439434_0000712 | |||
| 392 | Ga0451577_0000080 | |||
| 393 | Ga0466969_0007357 | |||
| 394 | Ga0466972_0005766 | |||
| 395 | Ga0453683_0000049 | |||
| 396 | Ga0466966_0000060 | |||
| 397 | Ga0466966_0001236 | |||
| 398 | Ga0466966_0002359 | |||
| 399 | Ga0466961_0000632 | |||
| 400 | Ga0466961_0042618 | |||
| 401 | Ga0466964_0007902 | |||
| 402 | Ga0453684_0000286 | |||
| 403 | Ga0466971_0009810 | |||
| 404 | Ga0466957_0029266 | |||
| 405 | Ga0466959_0016968 | |||
| 406 | Ga0451576_0000102 | |||
| 407 | Ga0495629_0000480 | |||
| 408 | Ga0495580_0009301 | |||
| 409 | Ga0495580_0023047 | |||
| 410 | Ga0495605_0000856 | |||
| 411 | Ga0495583_0000017 | |||
| 412 | Ga0495606_0000606 | |||
| 413 | Ga0495628_0002389 | |||
| 414 | Ga0495665_0031393 | |||
| 415 | Ga0495646_0051102 | |||
| 416 | Ga0495613_0018885 | |||
| 417 | Ga0495649_0001268 | |||
| 418 | Ga0495581_0001540 | |||
| 419 | Ga0495674_0053153 | |||
| 420 | Ga0495672_0001250 | |||
| 421 | Ga0495672_0022821 | |||
| 422 | Ga0495686_0000042 | |||
| 423 | Ga0496100_0000318 | |||
| 424 | Ga0496101_0000824 | |||
| 425 | Ga0496102_0009404 | |||
| 426 | Ga0496103_0002030 | |||
| 427 | Ga0496106_0000029 | |||
| 428 | Ga0496114_0012152 | |||
| 429 | Ga0496117_0003187 | |||
| 430 | Ga0496117_0017409 | |||
| 431 | Ga0496118_0003922 | |||
| 432 | Ga0496118_0005354 | |||
| 433 | Ga0496121_0016387 | |||
| 434 | Ga0496121_0018534 | |||
| 435 | Ga0496125_0077936 | |||
| 436 | Ga0496126_0000192 | |||
| 437 | Ga0496126_0000374 | |||
| 438 | Ga0501031_0006296 | |||
| 439 | Ga0500556_0000137 | |||
| 440 | Ga0466962_0005841 | |||
| 441 | 2904437109 | |||
| 442 | 2501072401 | |||
| 443 | 2501080124 | |||
| 444 | 2501412411 | |||
| 445 | 2511088001 | |||
| 446 | 2511101452 | |||
| 447 | 2511107945 | |||
| 448 | 2513556676 | |||
| 449 | 2513560607 | |||
| 450 | 2514048105 | |||
| 451 | 2516018238 | |||
| 452 | 2519461417 | |||
| 453 | 2563062984 | |||
| 454 | 2585290804 | |||
| 455 | 2599734687 | |||
| 456 | 2599745426 | |||
| 457 | 2600207333 | |||
| 458 | 2600812893 | |||
| 459 | 2676741146 | |||
| 460 | 2713477183 | |||
| 461 | 2792836429 | |||
| 462 | 2808967507 | |||
| 463 | 2808981733 | |||
| 464 | 2809002338 | |||
| 465 | 2809009615 | |||
| 466 | 2809131363 | |||
| 467 | 2809150985 | |||
| 468 | 2817258322 | |||
| 469 | 2817281264 | |||
| 470 | 2817452048 | |||
| 471 | 2819634489 | |||
| 472 | 2852622735 | |||
| 473 | 2863422152 | |||
| 474 | 2870075281 | |||
| 475 | 2883090352 | |||
| 476 | 2885195772 | |||
| 477 | 2904570608 | |||
| 478 | 2904577785 | |||
| 479 | 2904617121 | |||
| 480 | 2928159049 | |||
| 481 | 2928167881 | |||
| 482 | 2928175369 | |||
| 483 | 2928537941 | |||
| 484 | 2981992431 | |||
| 485 | 642417087 | |||
| 486 | 642592717 | |||
| 487 | 8003958437 | |||
| 488 | 8018848489 | |||
| 489 | 8020810373 | |||
| 490 | 8020941817 | |||
| 491 | 8020945621 | |||
| 492 | 8020958709 | |||
| 493 | 8021121718 | |||
| 494 | 8039103973 | |||
| 495 | 8040167417 | |||
| 496 | 8040175427 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7u4h-assembly2.cif.gz_B | crystal structure of penicillin-binding protein 1a (pbp1a) from chlamydia trachomatis | 0.8379 | 325 | 644 |
| 7u4h-assembly1.cif.gz_A | crystal structure of penicillin-binding protein 1a (pbp1a) from chlamydia trachomatis | 0.8329 | 325 | 644 |
| 6hzo-assembly2.cif.gz_B | error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) | 0.832 | 299 | 609 |
| 6hzo-assembly2.cif.gz_B | error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) | 0.8292 | 299 | 609 |
| 6hzo-assembly4.cif.gz_D | error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) | 0.826 | 299 | 609 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P76577_56_250_1.10.3810.10 | Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like | 0.8731 | 81 | 251 | 1.10.3810.10 |
| 5hldA02 | Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like | 0.8655 | 75 | 238 | 1.10.3810.10 |
| 3ue1A01 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.8636 | 273 | 613 | 3.40.710.10 |
| af_P76577_253_589_3.40.710.10 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.8616 | 272 | 614 | 3.40.710.10 |
| 4oonA02 | Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily | 0.8431 | 299 | 637 | 3.40.710.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-K1YYL1-F1-model_v4 | Penicillin-binding protein transpeptidase domain-containing protein | 0.9428 | 361 | 587 |
GO:0008658
GO:0008955 GO:0009252 GO:0030288 |
| AF-K1YYL1-F1-model_v4 | Penicillin-binding protein transpeptidase domain-containing protein | 0.9348 | 361 | 587 |
GO:0008658
GO:0008955 GO:0009252 GO:0030288 |
| AF-A0A3C1TRS9-F1-model_v4 | deleted | 0.8938 | 294 | 553 |
|
| AF-A0A5F0LQP2-F1-model_v4 | peptidoglycan glycosyltransferase (EC 2.4.99.28) | 0.8937 | 9 | 638 |
GO:0004180
GO:0006508 GO:0008658 GO:0008955 GO:0009252 GO:0030288 |
| AF-A0A5F0LQP2-F1-model_v4 | peptidoglycan glycosyltransferase (EC 2.4.99.28) | 0.8924 | 9 | 638 |
GO:0004180
GO:0006508 GO:0008658 GO:0008955 GO:0009252 GO:0030288 |