F360397

General Info

Members Datasets Scaffolds Average Seq Length
249 189 498 216

Family's Representative Sequence

Representative Sequence 3300003187|JGI25151J46595_10001920|JGI25151J46595_1000192012
Length 225
Sequence MTFDTLWSPVFLSLRVAALATIIVMIFGTVIGRVLARSSRRYKVLLETIFLLPMVLPPTVIGFFLIIIFGNNSPVGKWIESLFQQSIMFTSWAAVIASTIVSFPLMYQSAKTGFSIANEQIEDGARDLGASEYQVFVHVTLPLAFPALLSGMILSFVRAIGEFGATLMFAGNIPGKTQTIPTAIYMAIDASNMQLAWTLVIITVGMSLIFLLCIQFINKRITSLK

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
15 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
16 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
21 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
26 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
30 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
31 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
32 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
42 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
43 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
44 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
45 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
46 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
47 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
48 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
49 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
50 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
51 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
52 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
53 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
54 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
55 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
56 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
57 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
58 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
59 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
60 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
63 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
64 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
65 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
66 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
67 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
68 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
69 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
70 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
71 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
72 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
73 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
74 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
75 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
76 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
77 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
78 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
79 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
80 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
81 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
82 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
83 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
84 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
85 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
86 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
87 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
88 2643221729 Bacillus sp. Root11 Isolate Unclassified
89 2643221730 Bacillus sp. Root131 Isolate Unclassified
90 2643221731 Bacillus sp. Root147 Isolate Unclassified
91 2643221732 Bacillus sp. Root239 Isolate Unclassified
92 2684622632 Bacillus cereus 905 Isolate Unclassified
93 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
94 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
95 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
96 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
97 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
98 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
99 2738541358 Bacillus sp. OV752 Isolate Unclassified
100 2738543006 Bacillus sp. OK077 Isolate Unclassified
101 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
102 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
103 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
104 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
105 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
106 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
107 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
108 2818991441 Niallia circulans 3243 Isolate Rhizosphere
109 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
110 2818991459 Paenibacillus sp. 597 Isolate Unclassified
111 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
112 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
113 2842882022 Bacillus sp. R-71893 Isolate Unclassified
114 2857472729 Cohnella sp. R-74144 Isolate Unclassified
115 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
116 2860837431 Bacillus sp. WR11 Isolate Unclassified
117 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
118 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
119 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
120 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
121 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
122 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
123 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
124 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
125 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
126 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
127 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
128 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
129 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
130 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
131 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
132 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
133 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
134 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
135 2919720352 Priestia megaterium 4340 Isolate Unclassified
136 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
137 2929004312 Priestia megaterium 1104 Isolate Unclassified
138 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
139 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
140 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
141 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
142 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
143 2938917290 Bacillus sp. CR71 Isolate Unclassified
144 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
145 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
146 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
147 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
148 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
149 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
150 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
151 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
152 2965761152 Bacillus sp. COPE52 Isolate Unclassified
153 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
154 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
155 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
156 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
157 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
158 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
159 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
160 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
161 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
162 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
163 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
164 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
165 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
166 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
167 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
168 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
169 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
170 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
171 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
172 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
173 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
174 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
175 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
176 8022653035 Bacillus sp. Rc4 Isolate Unclassified
177 8022792930 Bacillus sp. Xin Isolate Rhizosphere
178 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
179 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
180 8023438354 Bacillus sp. BH2 Isolate Unclassified
181 8023444577 Bacillus sp. BH32 Isolate Unclassified
182 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
183 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
184 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
185 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
186 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
187 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
188 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
189 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 54.62
Metatranscriptomes 0.8
Isolates 44.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.05
Nodule 0.4
Rhizoplane 6.43
Rhizosphere 47.79
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10001920 3300003187 Bacteria 13184
2 JGI25159J45721_1003447 3300002987 Bacteria 5586
3 JGI25159J45721_1009816 3300002987 Bacteria 2494
4 JGI25159J45721_1016562 3300002987 Bacteria 1565
5 JGI25151J46595_10004002 3300003187 Bacteria 7920
6 JGI25151J46595_10016383 3300003187 Bacteria 3242
7 JGI25151J46595_10022236 3300003187 Bacteria 2636
8 JGI25151J46595_10049123 3300003187 Bacteria 1451
9 JGI25151J46595_10060407 3300003187 Bacteria 1213
10 JGI25151J46595_10065437 3300003187 Bacteria 1132
11 rootH2_10009450 3300003320 Bacteria 8806
12 rootL2_10016501 3300003322 Bacteria 51953
13 Ga0006562J51391_1020546 3300003578 Bacteria 1562
14 Ga0055538_1001411 3300003751 Bacteria 4675
15 Ga0055532_1000086 3300003758 Bacteria 109784
16 Ga0055528_1001485 3300003790 Bacteria 14238
17 Ga0055528_1015816 3300003790 Bacteria 2703
18 Ga0070676_10207010 3300005328 Bacteria 1289
19 Ga0070670_100027574 3300005331 Bacteria 4886
20 Ga0070675_100067208 3300005354 Bacteria 2966
21 Ga0070671_100038131 3300005355 Bacteria 3989
22 Ga0070672_100096193 3300005543 Bacteria 2396
23 Ga0105251_10006812 3300009011 Bacteria 7197
24 Ga0105251_10010146 3300009011 Bacteria 5491
25 Ga0105251_10054920 3300009011 Bacteria 1890
26 Ga0105244_10001921 3300009036 Bacteria 16147
27 Ga0105244_10004807 3300009036 Bacteria 9179
28 Ga0105244_10010810 3300009036 Bacteria 5511
29 Ga0105244_10020553 3300009036 Bacteria 3665
30 Ga0105244_10069967 3300009036 Bacteria 1751
31 Ga0105250_10009745 3300009092 Bacteria 4033
32 Ga0105250_10045416 3300009092 Bacteria 1761
33 Ga0105250_10054071 3300009092 Bacteria 1610
34 Ga0105250_10105008 3300009092 Bacteria 1154
35 Ga0105245_10002785 3300009098 Bacteria 15726
36 Ga0105247_10062191 3300009101 Bacteria 2316
37 Ga0105243_10002111 3300009148 Bacteria 16808
38 Ga0105242_10002349 3300009176 Bacteria 14931
39 Ga0105249_10370986 3300009553 Bacteria 1455
40 Ga0105246_10000609 3300011119 Bacteria 19894
41 Ga0105246_10001713 3300011119 Bacteria 13101
42 Ga0105246_10005927 3300011119 Bacteria 7457
43 Ga0105246_10844327 3300011119 Bacteria 816
44 Ga0157378_10002671 3300013297 Bacteria 15876
45 Ga0157372_10036485 3300013307 Bacteria 5418
46 Ga0157376_11310908 3300014969 Bacteria 754
47 Ga0209784_101525 3300025224 Bacteria 2956
48 Ga0209566_100269 3300025225 Bacteria 48732
49 Ga0209147_100169 3300025229 Bacteria 87841
50 Ga0209147_101060 3300025229 Bacteria 11624
51 Ga0209130_1001215 3300025284 Bacteria 18261
52 Ga0209130_1005027 3300025284 Bacteria 4752
53 Ga0209130_1013664 3300025284 Bacteria 2071
54 Ga0209130_1017018 3300025284 Bacteria 1743
55 Ga0209025_1000011 3300025294 Bacteria 976387
56 Ga0209025_1003544 3300025294 Bacteria 14640
57 Ga0209025_1003973 3300025294 Bacteria 13273
58 Ga0209025_1022334 3300025294 Bacteria 3361
59 Ga0209025_1029760 3300025294 Bacteria 2632
60 Ga0209025_1033321 3300025294 Bacteria 2382
61 Ga0209025_1035294 3300025294 Bacteria 2262
62 Ga0207426_1005950 3300025302 Bacteria 5414
63 Ga0207696_1001111 3300025711 Bacteria 15675
64 Ga0207696_1002888 3300025711 Bacteria 8095
65 Ga0207696_1016326 3300025711 Bacteria 2487
66 Ga0207655_1019241 3300025728 Bacteria 3580
67 Ga0207655_1026652 3300025728 Bacteria 2771
68 Ga0207655_1076463 3300025728 Bacteria 1224
69 Ga0207713_1001493 3300025735 Bacteria 18477
70 Ga0207713_1022630 3300025735 Bacteria 2976
71 Ga0207713_1038365 3300025735 Bacteria 2033
72 Ga0207713_1041808 3300025735 Bacteria 1908
73 Ga0207713_1085251 3300025735 Bacteria 1125
74 Ga0207645_10136707 3300025907 Bacteria 1596
75 Ga0207681_10442613 3300025923 Bacteria 1056
76 Ga0207659_10124515 3300025926 Bacteria 1980
77 Ga0207687_10049025 3300025927 Bacteria 2935
78 Ga0207686_10007902 3300025934 Bacteria 5735
79 Ga0207709_10011471 3300025935 Bacteria 4888
80 Ga0237817_10229 3300030083 Bacteria 14145
81 Ga0307408_100011432 3300031548 Bacteria 5866
82 Ga0395899_0020956 3300037312 Bacteria 4957
83 Ga0395899_0306574 3300037312 Bacteria 1073
84 Ga0395900_1155392 3300037418 Bacteria 690
85 Ga0237819_00027 3300038705 Bacteria 50338
86 Ga0237819_00051 3300038705 Bacteria 40282
87 Ga0439433_0018881 3300041999 Bacteria 1536
88 Ga0439449_0034360 3300042007 Bacteria 1888
89 Ga0439449_0161749 3300042007 Bacteria 836
90 Ga0450898_023043 3300042134 Bacteria 1106
91 Ga0466959_0001172 3300045049 Bacteria 15783
92 Ga0466967_0000766 3300045976 Bacteria 16636
93 Ga0495627_040155 3300046453 Bacteria 1442
94 Ga0495627_080065 3300046453 Bacteria 948
95 Ga0495590_0016320 3300046457 Bacteria 2684
96 Ga0495585_0020071 3300046492 Bacteria 3845
97 Ga0495597_0109554 3300046542 Bacteria 1159
98 Ga0495660_0053378 3300046810 Bacteria 2194
99 Ga0495660_0351388 3300046810 Bacteria 655
100 Ga0495683_0035498 3300047323 Bacteria 2534
101 Ga0496100_0004530 3300048903 Bacteria 7382
102 Ga0496101_0001658 3300048904 Bacteria 13355
103 Ga0496102_0026245 3300048905 Bacteria 5194
104 Ga0496102_0097660 3300048905 Bacteria 2724
105 Ga0496103_0009123 3300048906 Bacteria 5873
106 Ga0496104_0000453 3300048907 Bacteria 35518
107 Ga0496105_0033025 3300048908 Bacteria 4248
108 Ga0496106_0000643 3300048909 Bacteria 25037
109 Ga0496107_0000172 3300048910 Bacteria 33695
110 Ga0496108_0000949 3300048911 Bacteria 22523
111 Ga0496110_0338994 3300048913 Bacteria 1369
112 Ga0496111_0003249 3300048914 Bacteria 10036
113 Ga0496112_0034362 3300048915 Bacteria 4934
114 Ga0496113_0059779 3300048916 Bacteria 2871
115 Ga0496116_0006796 3300048919 Bacteria 10289
116 Ga0496116_0006841 3300048919 Bacteria 10247
117 Ga0496116_0107326 3300048919 Bacteria 1651
118 Ga0496116_0140030 3300048919 Bacteria 1363
119 Ga0496116_0223726 3300048919 Bacteria 961
120 Ga0496119_0092899 3300048922 Bacteria 1710
121 Ga0496119_0200721 3300048922 Bacteria 1032
122 Ga0496121_0039147 3300048924 Bacteria 4184
123 Ga0496121_0086555 3300048924 Bacteria 2462
124 Ga0496122_0017858 3300048925 Bacteria 6594
125 Ga0496122_0142344 3300048925 Bacteria 1497
126 Ga0496122_0196066 3300048925 Bacteria 1186
127 Ga0496123_0215983 3300048926 Bacteria 971
128 Ga0496124_0015343 3300048927 Bacteria 7352
129 Ga0496124_0057970 3300048927 Bacteria 3260
130 Ga0496124_0407642 3300048927 Bacteria 941
131 Ga0496125_0004095 3300048928 Bacteria 17059
132 Ga0496125_0013038 3300048928 Bacteria 8202
133 Ga0496125_0105254 3300048928 Bacteria 2063
134 Ga0496125_0340002 3300048928 Bacteria 901
135 Ga0496126_0000945 3300048929 Bacteria 49970
136 Ga0496126_0010713 3300048929 Bacteria 9578
137 Ga0496126_0064199 3300048929 Bacteria 3290
138 Ga0501323_001040 3300049539 Bacteria 2325
139 2512733703 2512564039 Bacteria 8739048
140 2540608255 2540341094 Bacteria 4061186
141 2550900211 2548877040 Bacteria 7507281
142 2553396802 2551306519 Bacteria 5465154
143 2571532711 2571042143 Bacteria 6986194
144 2595089564 2593339131 Bacteria 5116855
145 2595315800 2593339198 Bacteria 7267884
146 2601639854 2600255286 Bacteria 5390125
147 2643740996 2643221543 Bacteria 6628015
148 2644703546 2643221729 Bacteria 6621700
149 2644712601 2643221730 Bacteria 6523787
150 2644720324 2643221731 Bacteria 5623886
151 2644726592 2643221732 Bacteria 5756404
152 2685148127 2684622632 Bacteria 5380049
153 2698319564 2695420987 Bacteria 6152737
154 2705992086 2703719227 Bacteria 5631989
155 2721503518 2718218445 Bacteria 5113413
156 2723605253 2721755693 Bacteria 6126117
157 2728531796 2728368933 Bacteria 7044283
158 2730135916 2728369359 Bacteria 5621728
159 2739159539 2738541358 Bacteria 5932299
160 2739212198 2738543006 Bacteria 5904091
161 2753812908 2751185905 Bacteria 6142767
162 2757567868 2757320391 Bacteria 4746095
163 2777761121 2775507177 Bacteria 4384303
164 2777839187 2775507192 Bacteria 4622234
165 2793182657 2791355222 Bacteria 5898266
166 2802438275 2802428803 Bacteria 5806948
167 2809053383 2808606399 Bacteria 4021018
168 2819569795 2818991441 Bacteria 5062707
169 2819584746 2818991443 Bacteria 6598732
170 2819671343 2818991459 Bacteria 8736032
171 2819711176 2818991465 Bacteria 5388835
172 2821117266 2821111986 Bacteria 6894338
173 2842886263 2842882022 Bacteria 6158489
174 2857472733 2857472729 Bacteria 6568124
175 2857607231 2857604169 Bacteria 5111450
176 2860841048 2860837431 Bacteria 4202080
177 2865006353 2865002811 Bacteria 6333767
178 2885533115 2885526491 Bacteria 7164189
179 2888581575 2888578766 Bacteria 6743310
180 2889047538 2889042446 Bacteria 7618936
181 2889049791 2889049205 Bacteria 7524325
182 2889281209 2889276214 Bacteria 5979355
183 2889298677 2889295896 Bacteria 4704906
184 2904118364 2904113452 Bacteria 7796941
185 2904162508 2904162308 Bacteria 7086713
186 2904495671 2904490793 Bacteria 7046938
187 2904528677 2904524088 Bacteria 5887454
188 2904599368 2904595352 Bacteria 6124848
189 2904759791 2904755435 Bacteria 7986759
190 2907207915 2907202186 Bacteria 6632024
191 2919148308 2919143609 Bacteria 6219228
192 2919164442 2919160200 Bacteria 6929020
193 2919425769 2919425241 Bacteria 8055701
194 2919521925 2919517244 Bacteria 5858162
195 2919725057 2919720352 Bacteria 5986006
196 2925330413 2925326138 Bacteria 9652120
197 2929007779 2929004312 Bacteria 5678476
198 2929233364 2929233124 Bacteria 5948380
199 2931384588 2931384279 Bacteria 7299545
200 2936341147 2936340661 Bacteria 5139038
201 2936364126 2936361878 Bacteria 5632809
202 2938654370 2938649242 Bacteria 7118381
203 2938917566 2938917290 Bacteria 5914775
204 2939683888 2939679117 Bacteria 6921672
205 2939706538 2939702853 Bacteria 5139229
206 2945996755 2945991243 Bacteria 7008369
207 2946059443 2946053406 Bacteria 6978655
208 2947426823 2947426588 Bacteria 5357194
209 2960321245 2960319331 Bacteria 5502575
210 2960378516 2960375949 Bacteria 5361395
211 2962294282 2962290636 Bacteria 4072939
212 2965761370 2965761152 Bacteria 5806513
213 2968561509 2968558590 Bacteria 6956864
214 2969140257 2969136845 Bacteria 3923176
215 2969768969 2969765954 Bacteria 4216713
216 2969771297 2969770375 Bacteria 4271280
217 2971403949 2971403814 Bacteria 7370929
218 2971416774 2971410472 Bacteria 8311090
219 2971513201 2971511577 Bacteria 5404012
220 2979083832 2979083700 Bacteria 5894929
221 2980127268 2980125574 Bacteria 5567337
222 2980178595 2980176882 Bacteria 5397533
223 2980189570 2980182181 Bacteria 9454109
224 2981288286 2981284811 Bacteria 4641497
225 2981293107 2981289755 Bacteria 4641509
226 2981983752 2981980479 Bacteria 4641628
227 2981988671 2981985349 Bacteria 4641497
228 2988229049 2988225383 Bacteria 7221625
229 2996633190 2996632988 Bacteria 6921523
230 3006859608 3006858327 Bacteria 4317835
231 3006882783 3006879489 Bacteria 4064221
232 3006990423 3006988479 Bacteria 4767936
233 648171306 648028048 Bacteria 5394884
234 8002320631 8002317523 Bacteria 8051857
235 8022621300 8022621104 Bacteria 5241040
236 8022657071 8022653035 Bacteria 4035078
237 8022794913 8022792930 Bacteria 5693794
238 8022894295 8022893055 Bacteria 5300455
239 8022918595 8022914991 Bacteria 5584517
240 8023439616 8023438354 Bacteria 5779374
241 8023446463 8023444577 Bacteria 5661597
242 8046996917 8046991243 Bacteria 8497463
243 8054466375 8054465665 Bacteria 7323556
244 8054804699 8054795415 Bacteria 9785225
245 8055637186 8055632911 Bacteria 5283357
246 8056536962 8056533031 Bacteria 8964429
247 8057477943 8057473075 Bacteria 5892720
248 8057582879 8057582654 Bacteria 5218944
249 8057736471 8057733483 Bacteria 6578323
250 JGI25151J46595_10001920
251 JGI25159J45721_1003447
252 JGI25159J45721_1009816
253 JGI25159J45721_1016562
254 JGI25151J46595_10004002
255 JGI25151J46595_10016383
256 JGI25151J46595_10022236
257 JGI25151J46595_10049123
258 JGI25151J46595_10060407
259 JGI25151J46595_10065437
260 rootH2_10009450
261 rootL2_10016501
262 Ga0006562J51391_1020546
263 Ga0055538_1001411
264 Ga0055532_1000086
265 Ga0055528_1001485
266 Ga0055528_1015816
267 Ga0070676_10207010
268 Ga0070670_100027574
269 Ga0070675_100067208
270 Ga0070671_100038131
271 Ga0070672_100096193
272 Ga0105251_10006812
273 Ga0105251_10010146
274 Ga0105251_10054920
275 Ga0105244_10001921
276 Ga0105244_10004807
277 Ga0105244_10010810
278 Ga0105244_10020553
279 Ga0105244_10069967
280 Ga0105250_10009745
281 Ga0105250_10045416
282 Ga0105250_10054071
283 Ga0105250_10105008
284 Ga0105245_10002785
285 Ga0105247_10062191
286 Ga0105243_10002111
287 Ga0105242_10002349
288 Ga0105249_10370986
289 Ga0105246_10000609
290 Ga0105246_10001713
291 Ga0105246_10005927
292 Ga0105246_10844327
293 Ga0157378_10002671
294 Ga0157372_10036485
295 Ga0157376_11310908
296 Ga0209784_101525
297 Ga0209566_100269
298 Ga0209147_100169
299 Ga0209147_101060
300 Ga0209130_1001215
301 Ga0209130_1005027
302 Ga0209130_1013664
303 Ga0209130_1017018
304 Ga0209025_1000011
305 Ga0209025_1003544
306 Ga0209025_1003973
307 Ga0209025_1022334
308 Ga0209025_1029760
309 Ga0209025_1033321
310 Ga0209025_1035294
311 Ga0207426_1005950
312 Ga0207696_1001111
313 Ga0207696_1002888
314 Ga0207696_1016326
315 Ga0207655_1019241
316 Ga0207655_1026652
317 Ga0207655_1076463
318 Ga0207713_1001493
319 Ga0207713_1022630
320 Ga0207713_1038365
321 Ga0207713_1041808
322 Ga0207713_1085251
323 Ga0207645_10136707
324 Ga0207681_10442613
325 Ga0207659_10124515
326 Ga0207687_10049025
327 Ga0207686_10007902
328 Ga0207709_10011471
329 Ga0237817_10229
330 Ga0307408_100011432
331 Ga0395899_0020956
332 Ga0395899_0306574
333 Ga0395900_1155392
334 Ga0237819_00027
335 Ga0237819_00051
336 Ga0439433_0018881
337 Ga0439449_0034360
338 Ga0439449_0161749
339 Ga0450898_023043
340 Ga0466959_0001172
341 Ga0466967_0000766
342 Ga0495627_040155
343 Ga0495627_080065
344 Ga0495590_0016320
345 Ga0495585_0020071
346 Ga0495597_0109554
347 Ga0495660_0053378
348 Ga0495660_0351388
349 Ga0495683_0035498
350 Ga0496100_0004530
351 Ga0496101_0001658
352 Ga0496102_0026245
353 Ga0496102_0097660
354 Ga0496103_0009123
355 Ga0496104_0000453
356 Ga0496105_0033025
357 Ga0496106_0000643
358 Ga0496107_0000172
359 Ga0496108_0000949
360 Ga0496110_0338994
361 Ga0496111_0003249
362 Ga0496112_0034362
363 Ga0496113_0059779
364 Ga0496116_0006796
365 Ga0496116_0006841
366 Ga0496116_0107326
367 Ga0496116_0140030
368 Ga0496116_0223726
369 Ga0496119_0092899
370 Ga0496119_0200721
371 Ga0496121_0039147
372 Ga0496121_0086555
373 Ga0496122_0017858
374 Ga0496122_0142344
375 Ga0496122_0196066
376 Ga0496123_0215983
377 Ga0496124_0015343
378 Ga0496124_0057970
379 Ga0496124_0407642
380 Ga0496125_0004095
381 Ga0496125_0013038
382 Ga0496125_0105254
383 Ga0496125_0340002
384 Ga0496126_0000945
385 Ga0496126_0010713
386 Ga0496126_0064199
387 Ga0501323_001040
388 2512733703
389 2540608255
390 2550900211
391 2553396802
392 2571532711
393 2595089564
394 2595315800
395 2601639854
396 2643740996
397 2644703546
398 2644712601
399 2644720324
400 2644726592
401 2685148127
402 2698319564
403 2705992086
404 2721503518
405 2723605253
406 2728531796
407 2730135916
408 2739159539
409 2739212198
410 2753812908
411 2757567868
412 2777761121
413 2777839187
414 2793182657
415 2802438275
416 2809053383
417 2819569795
418 2819584746
419 2819671343
420 2819711176
421 2821117266
422 2842886263
423 2857472733
424 2857607231
425 2860841048
426 2865006353
427 2885533115
428 2888581575
429 2889047538
430 2889049791
431 2889281209
432 2889298677
433 2904118364
434 2904162508
435 2904495671
436 2904528677
437 2904599368
438 2904759791
439 2907207915
440 2919148308
441 2919164442
442 2919425769
443 2919521925
444 2919725057
445 2925330413
446 2929007779
447 2929233364
448 2931384588
449 2936341147
450 2936364126
451 2938654370
452 2938917566
453 2939683888
454 2939706538
455 2945996755
456 2946059443
457 2947426823
458 2960321245
459 2960378516
460 2962294282
461 2965761370
462 2968561509
463 2969140257
464 2969768969
465 2969771297
466 2971403949
467 2971416774
468 2971513201
469 2979083832
470 2980127268
471 2980178595
472 2980189570
473 2981288286
474 2981293107
475 2981983752
476 2981988671
477 2988229049
478 2996633190
479 3006859608
480 3006882783
481 3006990423
482 648171306
483 8002320631
484 8022621300
485 8022657071
486 8022794913
487 8022894295
488 8022918595
489 8023439616
490 8023446463
491 8046996917
492 8054466375
493 8054804699
494 8055637186
495 8056536962
496 8057477943
497 8057582879
498 8057736471

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

25

223

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.9104 3 214
2onk-assembly2.cif.gz_I abc transporter modbc in complex with its binding protein moda 0.8394 2 224
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.8378 3 214
8ja7-assembly1.cif.gz_B cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.8365 2 185
7ahc-assembly1.cif.gz_B opua apo inward-facing 0.8266 2 220
ID Description Score Start End Superfamily
af_Q2FVX5_4_220_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.938 8 220 1.10.3720.10
af_P0AEB0_20_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9309 2 221 1.10.3720.10
af_Q2FVX5_4_220_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9174 8 220 1.10.3720.10
3d31C00 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9104 3 214 1.10.3720.10
af_P0AEB0_20_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9072 2 221 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A832DQ75-F1-model_v4 ABC transporter permease subunit 0.9682 9 159 GO:0005886
GO:0055085
AF-A0A7X3TV05-F1-model_v4 ABC transporter permease 0.9595 10 156 GO:0005886
GO:0055085
AF-A0A7Y5CR29-F1-model_v4 Molybdenum transport system permease 0.9451 7 224 GO:0005886
GO:0015098
AF-A0A6M0H4W1-F1-model_v4 Molybdenum transport system permease 0.9446 6 222 GO:0005886
GO:0015098
AF-A0A437UUI7-F1-model_v4 Molybdenum transport system permease 0.9435 7 223 GO:0005886
GO:0015098

Map