F360403

General Info

Members Datasets Scaffolds Average Seq Length
249 174 498 276

Family's Representative Sequence

Representative Sequence 3300003215|JGI25153J46596_10025167|JGI25153J46596_100251671
Length 287
Sequence MTSPQAPLRVGLVQTRTPATHAAALAHVAPLVRQAAEQGARFILTPEGVNVLQKDRAKLLPTLVSLEDDPVVRGLRDLARELGVWIDVGSALVLREDGPEGGKAANRQAVIDPTGAIVATYDKLHMFDVDLPPRDGKKGETARESATYEPGERAVVAETPLGAFGLTICYDMRFPALHRALALGGAQVLTVPAAFTRPTGEAHWDILLRARAIETGSFVIAAAQGGFHEDGRGTWGRSIAIGPWGEVIGKLDHDEPGVLIADLDLAAVDKARAAIPALKNARAFTGP

Samples

Sample ID Description Type Environment
1 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
2 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
42 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
74 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
84 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
85 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
86 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
93 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
94 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
97 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
98 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
99 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
100 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
101 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
104 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
105 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
111 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
112 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
133 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
134 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
135 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
136 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
139 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
140 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
141 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
142 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
143 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
144 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
145 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
148 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
149 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
150 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
151 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
152 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
153 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
154 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
155 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
156 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
157 2643221584 Caulobacter sp. Root656 Isolate Unclassified
158 2643221640 Caulobacter sp. Root342 Isolate Unclassified
159 2643221642 Caulobacter sp. Root343 Isolate Unclassified
160 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
161 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
162 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
163 2818991435 Caulobacter henricii 536 Isolate Unclassified
164 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
165 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
166 2849560528 Caulobacter zeae 410 Isolate Unclassified
167 2851153111 Caulobacter radicis 736 Isolate Unclassified
168 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
169 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
170 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
171 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
172 2902330777 Methylobacterium sp. 2A Isolate Unclassified
173 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
174 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.16
Metatranscriptomes 1.2
Isolates 9.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.9
Nodule 0.4
Rhizoplane 1.61
Rhizosphere 59.44
Stem 0
Stem Tuber 0
Unclassified 0.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10025167 3300003215 Bacteria 2132
2 Ga0055537_1019543 3300003773 Bacteria 1049
3 Ga0055536_1006012 3300003781 Bacteria 5766
4 Ga0055536_1006740 3300003781 Bacteria 5270
5 Ga0055530_10004666 3300003791 Bacteria 6949
6 Ga0055531_10001306 3300003794 Bacteria 18794
7 Ga0055531_10007308 3300003794 Bacteria 6054
8 Ga0065165_1001479 3300005262 Bacteria 25047
9 Ga0070691_10040388 3300005341 Bacteria 2205
10 Ga0070659_100008732 3300005366 Bacteria 7415
11 Ga0070703_10063964 3300005406 Bacteria 1211
12 Ga0070714_100213012 3300005435 Bacteria 1772
13 Ga0070713_100469396 3300005436 Bacteria 1184
14 Ga0070708_100454573 3300005445 Unclassified 1208
15 Ga0070681_10022067 3300005458 Bacteria 6388
16 Ga0070706_100000970 3300005467 Bacteria 31304
17 Ga0070706_100030360 3300005467 Bacteria 4980
18 Ga0070706_100659091 3300005467 Bacteria 971
19 Ga0070707_100000219 3300005468 Bacteria 57187
20 Ga0070707_100458051 3300005468 Bacteria 1236
21 Ga0070698_100111690 3300005471 Bacteria 2698
22 Ga0070698_100162133 3300005471 Bacteria 2179
23 Ga0070699_100007731 3300005518 Bacteria 9345
24 Ga0070679_100013873 3300005530 Bacteria 7722
25 Ga0070697_100028083 3300005536 Bacteria 4504
26 Ga0068853_100295791 3300005539 Bacteria 1495
27 Ga0070665_100429469 3300005548 Bacteria 1330
28 Ga0068857_100011028 3300005577 Bacteria 7868
29 Ga0068856_100413596 3300005614 Bacteria 1369
30 Ga0068859_100167377 3300005617 Bacteria 2278
31 Ga0068862_100098975 3300005844 Bacteria 2548
32 Ga0070717_10048413 3300006028 Bacteria 3486
33 Ga0070712_100424872 3300006175 Bacteria 1102
34 Ga0075369_10014755 3300006186 Bacteria 3126
35 Ga0075366_10012447 3300006195 Bacteria 4826
36 Ga0105240_10586116 3300009093 Bacteria 1230
37 Ga0111539_10132452 3300009094 Bacteria 2919
38 Ga0105238_10412845 3300009551 Bacteria 1344
39 Ga0157373_10005812 3300013100 Bacteria 9234
40 Ga0157373_10005961 3300013100 Bacteria 9114
41 Ga0157371_10234260 3300013102 Bacteria 1320
42 Ga0157370_10140496 3300013104 Bacteria 2250
43 Ga0157369_10138541 3300013105 Bacteria 2575
44 Ga0157369_10770562 3300013105 Bacteria 989
45 Ga0206351_10106489 3300020077 Bacteria 1911
46 Ga0206354_10424212 3300020081 Bacteria 1025
47 Ga0213874_10004764 3300021377 Bacteria 3125
48 Ga0213876_10000074 3300021384 Bacteria 120394
49 Ga0213876_10159390 3300021384 Bacteria 1200
50 Ga0213871_10013977 3300021441 Bacteria 1896
51 Ga0224712_10018167 3300022467 Bacteria 2345
52 Ga0209565_1000242 3300025263 Bacteria 58681
53 Ga0209673_1000976 3300025273 Bacteria 35297
54 Ga0209675_1012653 3300025291 Bacteria 2700
55 Ga0209676_1000289 3300025292 Bacteria 103078
56 Ga0209676_1000840 3300025292 Bacteria 39709
57 Ga0209564_1006888 3300025295 Bacteria 5991
58 Ga0209564_1012054 3300025295 Bacteria 3806
59 Ga0209758_1002274 3300025297 Bacteria 19896
60 Ga0209758_1004608 3300025297 Bacteria 11325
61 Ga0209050_1002333 3300025298 Bacteria 16676
62 Ga0209050_1008775 3300025298 Bacteria 5313
63 Ga0209256_1002323 3300025299 Bacteria 15904
64 Ga0209256_1002598 3300025299 Bacteria 14328
65 Ga0209257_1000036 3300025304 Bacteria 616006
66 Ga0209257_1002980 3300025304 Bacteria 15412
67 Ga0209257_1016769 3300025304 Bacteria 2938
68 Ga0207699_10388439 3300025906 Bacteria 992
69 Ga0207684_10002891 3300025910 Bacteria 17014
70 Ga0207684_10016601 3300025910 Bacteria 6321
71 Ga0207684_10022752 3300025910 Bacteria 5351
72 Ga0207695_10000893 3300025913 Bacteria 54084
73 Ga0207652_10012123 3300025921 Bacteria 6963
74 Ga0207646_10000167 3300025922 Bacteria 89123
75 Ga0207646_10011378 3300025922 Bacteria 8630
76 Ga0207694_10033862 3300025924 Bacteria 3915
77 Ga0207664_10213607 3300025929 Bacteria 1670
78 Ga0207690_10032632 3300025932 Bacteria 3343
79 Ga0207639_10323836 3300026041 Bacteria 1369
80 Ga0207674_10025588 3300026116 Bacteria 6289
81 Ga0209967_1020653 3300027364 Bacteria 960
82 Ga0268266_10277729 3300028379 Bacteria 1557
83 Ga0268265_10030772 3300028380 Bacteria 3870
84 Ga0265334_10054616 3300028573 Bacteria 1523
85 Ga0307515_10035485 3300028794 Bacteria 8110
86 Ga0307515_10048254 3300028794 Bacteria 6443
87 Ga0265338_10008780 3300028800 Bacteria 12210
88 Ga0265338_10032017 3300028800 Bacteria 5141
89 Ga0265338_10062591 3300028800 Bacteria 3250
90 Ga0265340_10036304 3300031247 Bacteria 2443
91 Ga0265327_10000454 3300031251 Bacteria 73503
92 Ga0265327_10003251 3300031251 Bacteria 15760
93 Ga0265314_10063836 3300031711 Bacteria 2496
94 Ga0265314_10103560 3300031711 Bacteria 1824
95 Ga0307516_10000020 3300031730 Bacteria 195931
96 Ga0307416_100207131 3300032002 Bacteria 1867
97 Ga0373954_0001120 3300035118 Bacteria 10736
98 Ga0373956_0011274 3300035119 Bacteria 3681
99 Ga0373927_0000005 3300035695 Bacteria 221415
100 Ga0373933_0036858 3300035724 Bacteria 2865
101 Ga0373937_0327219 3300036401 Bacteria 1450
102 Ga0373937_0445281 3300036401 Bacteria 1230
103 Ga0395898_0394066 3300037466 Bacteria 1320
104 Ga0395901_0118281 3300038443 Bacteria 2784
105 Ga0436365_1670519 3300039437 Bacteria 1478
106 Ga0436365_1728448 3300039437 Bacteria 2360
107 Ga0436365_1797099 3300039437 Bacteria 84930
108 Ga0436365_1850237 3300039437 Unclassified 2049
109 Ga0436360_0266890 3300039438 Bacteria 1896
110 Ga0436363_0503229 3300039450 Bacteria 3189
111 Ga0436363_0942573 3300039450 Bacteria 3682
112 Ga0436363_1474979 3300039450 Bacteria 1927
113 Ga0451853_0707576 3300041512 Bacteria 1472
114 Ga0450893_0012942 3300042532 Bacteria 1388
115 Ga0495627_000397 3300046453 Bacteria 39323
116 Ga0495590_0004604 3300046457 Bacteria 5541
117 Ga0495629_0000123 3300046459 Bacteria 68858
118 Ga0495629_0013146 3300046459 Bacteria 5977
119 Ga0495638_0000960 3300046460 Bacteria 29237
120 Ga0495638_0001722 3300046460 Bacteria 19242
121 Ga0495638_0002411 3300046460 Bacteria 15279
122 Ga0495638_0006686 3300046460 Bacteria 8355
123 Ga0495638_0017416 3300046460 Bacteria 4789
124 Ga0495638_0138450 3300046460 Bacteria 1423
125 Ga0495638_0192008 3300046460 Bacteria 1158
126 Ga0495650_0000068 3300046471 Bacteria 266671
127 Ga0495582_0002360 3300046473 Bacteria 10560
128 Ga0495639_0028564 3300046475 Bacteria 2471
129 Ga0495594_0056647 3300046499 Bacteria 2163
130 Ga0495583_0000002 3300046506 Bacteria 782521
131 Ga0495583_0102927 3300046506 Bacteria 1217
132 Ga0495606_0013667 3300046507 Bacteria 6396
133 Ga0495610_0001379 3300046512 Bacteria 21566
134 Ga0495610_0003215 3300046512 Bacteria 12928
135 Ga0495610_0008833 3300046512 Bacteria 6461
136 Ga0495616_0002094 3300046513 Bacteria 13405
137 Ga0495616_0018305 3300046513 Bacteria 3848
138 Ga0495631_0000827 3300046518 Bacteria 19791
139 Ga0495632_0001771 3300046519 Bacteria 17444
140 Ga0495632_0048616 3300046519 Bacteria 2099
141 Ga0495637_0030909 3300046520 Bacteria 2372
142 Ga0495637_0034782 3300046520 Bacteria 2204
143 Ga0495648_0000067 3300046524 Bacteria 140250
144 Ga0495648_0077085 3300046524 Bacteria 1912
145 Ga0495654_0000042 3300046530 Bacteria 164346
146 Ga0495622_0042280 3300046557 Bacteria 2119
147 Ga0495633_0038383 3300046558 Bacteria 2288
148 Ga0495633_0110763 3300046558 Bacteria 1273
149 Ga0495668_0000026 3300046616 Bacteria 297287
150 Ga0495668_0001352 3300046616 Bacteria 24072
151 Ga0495668_0005590 3300046616 Bacteria 8451
152 Ga0495625_0000127 3300046660 Bacteria 118526
153 Ga0495625_0012636 3300046660 Bacteria 6834
154 Ga0495625_0115070 3300046660 Bacteria 1835
155 Ga0495635_0000112 3300046663 Bacteria 48336
156 Ga0495647_0076889 3300046681 Bacteria 1346
157 Ga0495658_0000003 3300046683 Bacteria 224090
158 Ga0495613_0013443 3300046689 Bacteria 6080
159 Ga0495670_0069287 3300046691 Bacteria 1783
160 Ga0495589_0022528 3300046794 Bacteria 3213
161 Ga0495660_0001489 3300046810 Bacteria 15861
162 Ga0495581_0000099 3300047315 Bacteria 36299
163 Ga0495581_0021981 3300047315 Bacteria 3697
164 Ga0495672_0002355 3300047320 Bacteria 17459
165 Ga0495676_0041023 3300047321 Bacteria 3814
166 Ga0495680_0002323 3300047322 Bacteria 19497
167 Ga0495680_0175620 3300047322 Bacteria 1549
168 Ga0495680_0375793 3300047322 Bacteria 985
169 Ga0495673_0000293 3300047469 Bacteria 67070
170 Ga0495673_0000886 3300047469 Bacteria 27530
171 Ga0495686_0001958 3300047472 Bacteria 20461
172 Ga0495686_0021994 3300047472 Bacteria 4223
173 Ga0495686_0023368 3300047472 Bacteria 4078
174 Ga0495686_0037936 3300047472 Bacteria 3085
175 Ga0496106_0048847 3300048909 Bacteria 3187
176 Ga0496107_0000113 3300048910 Bacteria 39326
177 Ga0496113_0152819 3300048916 Bacteria 1822
178 Ga0496115_0000546 3300048918 Bacteria 29331
179 Ga0496121_0014089 3300048924 Bacteria 8524
180 Ga0496121_0222508 3300048924 Bacteria 1328
181 Ga0496124_0010685 3300048927 Bacteria 9261
182 Ga0496124_0150164 3300048927 Bacteria 1829
183 Ga0496125_0027084 3300048928 Bacteria 5205
184 Ga0496126_0001854 3300048929 Bacteria 30807
185 Ga0495678_001041 3300049459 Bacteria 23510
186 Ga0501043_0246989 3300049579 Bacteria 1375
187 Ga0501035_0110270 3300049822 Bacteria 2412
188 nmdc:mga0sz30_3025_c1 3300050516 Bacteria 6025
189 Ga0495619_0002577 3300053085 Bacteria 11837
190 Ga0495619_0138596 3300053085 Bacteria 1674
191 Ga0500578_0000309 3300053086 Bacteria 59973
192 Ga0500643_000399 3300053087 Bacteria 33231
193 Ga0500644_0000036 3300053088 Bacteria 80681
194 Ga0500644_0040613 3300053088 Bacteria 1540
195 Ga0500554_023353 3300053102 Bacteria 1738
196 Ga0500556_0000926 3300053104 Bacteria 15947
197 Ga0500556_0003128 3300053104 Bacteria 4940
198 Ga0500562_000770 3300053108 Bacteria 7798
199 Ga0500562_001263 3300053108 Bacteria 6250
200 Ga0500562_001559 3300053108 Bacteria 5682
201 Ga0500562_038538 3300053108 Bacteria 1269
202 Ga0500562_055905 3300053108 Bacteria 1058
203 Ga0500594_0000456 3300053118 Bacteria 9009
204 Ga0500595_030546 3300053119 Bacteria 1814
205 Ga0500608_001144 3300053122 Bacteria 9457
206 Ga0500618_000074 3300053125 Bacteria 81608
207 Ga0500658_0006304 3300053134 Bacteria 4404
208 Ga0500559_0000086 3300053136 Bacteria 73688
209 Ga0500559_0006465 3300053136 Bacteria 5293
210 Ga0500559_0032143 3300053136 Bacteria 2254
211 Ga0500564_000048 3300053138 Bacteria 31432
212 Ga0500577_0001105 3300053142 Bacteria 6918
213 Ga0500616_0015824 3300053153 Bacteria 4307
214 Ga0500616_0029259 3300053153 Bacteria 3032
215 Ga0500616_0030174 3300053153 Bacteria 2980
216 Ga0500616_0059649 3300053153 Bacteria 1981
217 Ga0500622_0001059 3300053156 Bacteria 22916
218 Ga0500622_0003258 3300053156 Bacteria 11015
219 Ga0500622_0004093 3300053156 Bacteria 9342
220 Ga0500622_0028259 3300053156 Bacteria 2952
221 Ga0500634_0105705 3300053161 Bacteria 1400
222 Ga0500645_000131 3300053730 Bacteria 58717
223 Ga0500645_000662 3300053730 Bacteria 21612
224 Ga0500645_001301 3300053730 Bacteria 12962
225 Ga0500609_000806 3300053731 Bacteria 4709
226 2585146485 2582581279 Bacteria 4980720
227 2585151922 2582581280 Bacteria 5994497
228 2585194593 2582581293 Bacteria 5907401
229 2587918448 2585428106 Bacteria 5179711
230 2643748557 2643221545 Bacteria 5083237
231 2643779517 2643221552 Bacteria 5708754
232 2643931086 2643221584 Bacteria 5511711
233 2644224990 2643221640 Bacteria 5258820
234 2644234076 2643221642 Bacteria 5357871
235 2644510231 2643221691 Bacteria 5093099
236 2738746399 2738541281 Bacteria 5112672
237 2739355629 2738543032 Bacteria 5115625
238 2819537400 2818991435 Bacteria 5433759
239 2819646538 2818991454 Bacteria 5563326
240 2842699319 2842698319 Bacteria 5190321
241 2849561862 2849560528 Bacteria 5393480
242 2851157752 2851153111 Bacteria 5542585
243 2857505355 2857504554 Bacteria 5369913
244 2861693807 2861691609 Bacteria 5628931
245 2884962383 2884960567 Bacteria 5437054
246 2898332599 2898329390 Bacteria 5168154
247 2902333473 2902330777 Bacteria 6395352
248 2928533187 2928531327 Bacteria 5101314
249 643603577 643348564 Bacteria 8839022
250 JGI25153J46596_10025167
251 Ga0055537_1019543
252 Ga0055536_1006012
253 Ga0055536_1006740
254 Ga0055530_10004666
255 Ga0055531_10001306
256 Ga0055531_10007308
257 Ga0065165_1001479
258 Ga0070691_10040388
259 Ga0070659_100008732
260 Ga0070703_10063964
261 Ga0070714_100213012
262 Ga0070713_100469396
263 Ga0070708_100454573
264 Ga0070681_10022067
265 Ga0070706_100000970
266 Ga0070706_100030360
267 Ga0070706_100659091
268 Ga0070707_100000219
269 Ga0070707_100458051
270 Ga0070698_100111690
271 Ga0070698_100162133
272 Ga0070699_100007731
273 Ga0070679_100013873
274 Ga0070697_100028083
275 Ga0068853_100295791
276 Ga0070665_100429469
277 Ga0068857_100011028
278 Ga0068856_100413596
279 Ga0068859_100167377
280 Ga0068862_100098975
281 Ga0070717_10048413
282 Ga0070712_100424872
283 Ga0075369_10014755
284 Ga0075366_10012447
285 Ga0105240_10586116
286 Ga0111539_10132452
287 Ga0105238_10412845
288 Ga0157373_10005812
289 Ga0157373_10005961
290 Ga0157371_10234260
291 Ga0157370_10140496
292 Ga0157369_10138541
293 Ga0157369_10770562
294 Ga0206351_10106489
295 Ga0206354_10424212
296 Ga0213874_10004764
297 Ga0213876_10000074
298 Ga0213876_10159390
299 Ga0213871_10013977
300 Ga0224712_10018167
301 Ga0209565_1000242
302 Ga0209673_1000976
303 Ga0209675_1012653
304 Ga0209676_1000289
305 Ga0209676_1000840
306 Ga0209564_1006888
307 Ga0209564_1012054
308 Ga0209758_1002274
309 Ga0209758_1004608
310 Ga0209050_1002333
311 Ga0209050_1008775
312 Ga0209256_1002323
313 Ga0209256_1002598
314 Ga0209257_1000036
315 Ga0209257_1002980
316 Ga0209257_1016769
317 Ga0207699_10388439
318 Ga0207684_10002891
319 Ga0207684_10016601
320 Ga0207684_10022752
321 Ga0207695_10000893
322 Ga0207652_10012123
323 Ga0207646_10000167
324 Ga0207646_10011378
325 Ga0207694_10033862
326 Ga0207664_10213607
327 Ga0207690_10032632
328 Ga0207639_10323836
329 Ga0207674_10025588
330 Ga0209967_1020653
331 Ga0268266_10277729
332 Ga0268265_10030772
333 Ga0265334_10054616
334 Ga0307515_10035485
335 Ga0307515_10048254
336 Ga0265338_10008780
337 Ga0265338_10032017
338 Ga0265338_10062591
339 Ga0265340_10036304
340 Ga0265327_10000454
341 Ga0265327_10003251
342 Ga0265314_10063836
343 Ga0265314_10103560
344 Ga0307516_10000020
345 Ga0307416_100207131
346 Ga0373954_0001120
347 Ga0373956_0011274
348 Ga0373927_0000005
349 Ga0373933_0036858
350 Ga0373937_0327219
351 Ga0373937_0445281
352 Ga0395898_0394066
353 Ga0395901_0118281
354 Ga0436365_1670519
355 Ga0436365_1728448
356 Ga0436365_1797099
357 Ga0436365_1850237
358 Ga0436360_0266890
359 Ga0436363_0503229
360 Ga0436363_0942573
361 Ga0436363_1474979
362 Ga0451853_0707576
363 Ga0450893_0012942
364 Ga0495627_000397
365 Ga0495590_0004604
366 Ga0495629_0000123
367 Ga0495629_0013146
368 Ga0495638_0000960
369 Ga0495638_0001722
370 Ga0495638_0002411
371 Ga0495638_0006686
372 Ga0495638_0017416
373 Ga0495638_0138450
374 Ga0495638_0192008
375 Ga0495650_0000068
376 Ga0495582_0002360
377 Ga0495639_0028564
378 Ga0495594_0056647
379 Ga0495583_0000002
380 Ga0495583_0102927
381 Ga0495606_0013667
382 Ga0495610_0001379
383 Ga0495610_0003215
384 Ga0495610_0008833
385 Ga0495616_0002094
386 Ga0495616_0018305
387 Ga0495631_0000827
388 Ga0495632_0001771
389 Ga0495632_0048616
390 Ga0495637_0030909
391 Ga0495637_0034782
392 Ga0495648_0000067
393 Ga0495648_0077085
394 Ga0495654_0000042
395 Ga0495622_0042280
396 Ga0495633_0038383
397 Ga0495633_0110763
398 Ga0495668_0000026
399 Ga0495668_0001352
400 Ga0495668_0005590
401 Ga0495625_0000127
402 Ga0495625_0012636
403 Ga0495625_0115070
404 Ga0495635_0000112
405 Ga0495647_0076889
406 Ga0495658_0000003
407 Ga0495613_0013443
408 Ga0495670_0069287
409 Ga0495589_0022528
410 Ga0495660_0001489
411 Ga0495581_0000099
412 Ga0495581_0021981
413 Ga0495672_0002355
414 Ga0495676_0041023
415 Ga0495680_0002323
416 Ga0495680_0175620
417 Ga0495680_0375793
418 Ga0495673_0000293
419 Ga0495673_0000886
420 Ga0495686_0001958
421 Ga0495686_0021994
422 Ga0495686_0023368
423 Ga0495686_0037936
424 Ga0496106_0048847
425 Ga0496107_0000113
426 Ga0496113_0152819
427 Ga0496115_0000546
428 Ga0496121_0014089
429 Ga0496121_0222508
430 Ga0496124_0010685
431 Ga0496124_0150164
432 Ga0496125_0027084
433 Ga0496126_0001854
434 Ga0495678_001041
435 Ga0501043_0246989
436 Ga0501035_0110270
437 nmdc:mga0sz30_3025_c1
438 Ga0495619_0002577
439 Ga0495619_0138596
440 Ga0500578_0000309
441 Ga0500643_000399
442 Ga0500644_0000036
443 Ga0500644_0040613
444 Ga0500554_023353
445 Ga0500556_0000926
446 Ga0500556_0003128
447 Ga0500562_000770
448 Ga0500562_001263
449 Ga0500562_001559
450 Ga0500562_038538
451 Ga0500562_055905
452 Ga0500594_0000456
453 Ga0500595_030546
454 Ga0500608_001144
455 Ga0500618_000074
456 Ga0500658_0006304
457 Ga0500559_0000086
458 Ga0500559_0006465
459 Ga0500559_0032143
460 Ga0500564_000048
461 Ga0500577_0001105
462 Ga0500616_0015824
463 Ga0500616_0029259
464 Ga0500616_0030174
465 Ga0500616_0059649
466 Ga0500622_0001059
467 Ga0500622_0003258
468 Ga0500622_0004093
469 Ga0500622_0028259
470 Ga0500634_0105705
471 Ga0500645_000131
472 Ga0500645_000662
473 Ga0500645_001301
474 Ga0500609_000806
475 2585146485
476 2585151922
477 2585194593
478 2587918448
479 2643748557
480 2643779517
481 2643931086
482 2644224990
483 2644234076
484 2644510231
485 2738746399
486 2739355629
487 2819537400
488 2819646538
489 2842699319
490 2849561862
491 2851157752
492 2857505355
493 2861693807
494 2884962383
495 2898332599
496 2902333473
497 2928533187
498 643603577

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00795

CN_hydrolase

Carbon-nitrogen hydrolase

9

273

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ovg-assembly1.cif.gz_B the c146a variant of an amidase from pyrococcus horikoshii with bound acetamide 0.9389 8 269
3iw3-assembly1.cif.gz_B crystal structure of hyperthermophilic nitrilase 0.9376 9 268
2w1v-assembly1.cif.gz_B crystal structure of mouse nitrilase-2 at 1.4a resolution 0.9342 5 282
1ems-assembly1.cif.gz_A crystal structure of the c. elegans nitfhit protein 0.9251 6 282
1j31-assembly2.cif.gz_D crystal structure of hypothetical protein ph0642 from pyrococcus horikoshii 0.9227 8 282
ID Description Score Start End Superfamily
af_Q8VDK1_45_315_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9565 11 282 3.60.110.10
af_O76463_1_291_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9504 2 282 3.60.110.10
af_O94660_4_273_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9482 11 276 3.60.110.10
af_Q94JV5_26_305_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9439 2 284 3.60.110.10
af_Q557J5_4_291_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9412 7 282 3.60.110.10
ID Description Score Start End GO Terms
AF-A0A2N6BAK1-F1-model_v4 Amidohydrolase 0.9894 167 287 GO:0016787
AF-A0A328ADM0-F1-model_v4 Carbon-nitrogen hydrolase family protein 0.988 9 287 GO:0016811
AF-A0A328ADM0-F1-model_v4 Carbon-nitrogen hydrolase family protein 0.9807 9 287 GO:0016811
AF-A0A3B0TIW8-F1-model_v4 CN hydrolase domain-containing protein 0.9803 121 285
AF-A0A1B9TDB6-F1-model_v4 deleted 0.9778 8 287

Map