F360408

General Info

Members Datasets Scaffolds Average Seq Length
249 165 498 479

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10079138|rootH2_100791387
Length 573
Sequence MRRMIFPRVDPGSCHARTAGIHYPYAPAFIFPAYRQVLVIVDHNALSVYIKIGKAGKDRESKNKCCFLWCLYQNVQLKYQIVHHNSYSFIPAYHSKSYRMNTLKVGLFGIGLAAYWEQFEGLQQRLSGYIDVVHQQLQGYGAEIVSLGLIDTPEKAFEAGSRFRQEEVDLIFLYVTTYALSSTVLPVVKRAKVPVIVLNLSPAAAIDYTAFNNLGNRTAMTGEWLAFCAACPVPEIASVFKRSGIPFYQVTGMLHDDPGVWKEVEEWIAAAKVAHTMYHNRLGLMGNYYGGMLDIYSNLTLHAAVLGGHMEIIEVDELSGIRATVSETEMAAKLQEAGRVFEIQPDCSPEELHRAARTAVALDKLVAKHQLGSLAYYHKGSGNAVNEDTMSSVIMGTSLLTAQGVPVAGEYEVKNAQAMKIMDSFGAGGSFTEYYAMDYQDDIVLMGHDGPCHPVIAAGKIKLKPLQVYHGKVGKGLSVEMSVAHGPVTLLSVVETGNGTLQFLLAEGMSEAGPILEIGNTNSRYRFSIGARNFVEAWNAQGPAHHCAVGKGHIAPRIKKLAELLGIEAIQVC

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
68 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
72 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
73 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
74 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
75 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
76 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
117 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
120 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
128 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
134 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
135 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
138 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
143 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
144 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
150 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
156 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
157 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
158 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
159 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
160 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
161 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
162 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
163 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
164 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
165 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.79
Metatranscriptomes 0
Isolates 3.21

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.21
Nodule 0
Rhizoplane 1.2
Rhizosphere 88.76
Stem 0
Stem Tuber 0
Unclassified 7.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10079138 3300003320 Bacteria 20872
2 SwRhRL2b_contig_2056031 2162886007 Bacteria 41625
3 JGI24740J21852_10009228 3300001979 Bacteria 3874
4 JGI25162J39368_1000012 3300002737 Bacteria 373191
5 JGI25154J39366_1000008 3300002738 Bacteria 315375
6 JGI25157J39369_1003178 3300002741 Unclassified 3488
7 rootH2_10018501 3300003320 Bacteria 14992
8 Ga0065714_10003347 3300005288 Bacteria 22247
9 Ga0065704_10000208 3300005289 Bacteria 101850
10 Ga0070658_10159181 3300005327 Bacteria 1894
11 Ga0070676_10013189 3300005328 Bacteria 4528
12 Ga0070676_10040709 3300005328 Unclassified 2692
13 Ga0070683_100021249 3300005329 Bacteria 5789
14 Ga0070666_10016680 3300005335 Bacteria 4700
15 Ga0070680_100036799 3300005336 Bacteria 3954
16 Ga0068868_100097050 3300005338 Bacteria 2381
17 Ga0070660_100040511 3300005339 Unclassified 3545
18 Ga0070691_10001269 3300005341 Bacteria 10659
19 Ga0070661_100051175 3300005344 Unclassified 3023
20 Ga0070668_100009001 3300005347 Bacteria 7414
21 Ga0070659_100016622 3300005366 Bacteria 5527
22 Ga0070709_10000323 3300005434 Bacteria 30234
23 Ga0070709_10018116 3300005434 Bacteria 4050
24 Ga0070709_10059295 3300005434 Bacteria 2430
25 Ga0070713_100000034 3300005436 Bacteria 86671
26 Ga0070713_100002075 3300005436 Bacteria 12953
27 Ga0070713_100105232 3300005436 Bacteria 2451
28 Ga0070711_100000387 3300005439 Bacteria 22724
29 Ga0070663_100066650 3300005455 Unclassified 2609
30 Ga0070662_100023293 3300005457 Bacteria 4252
31 Ga0070681_10025134 3300005458 Bacteria 5993
32 Ga0070706_100000447 3300005467 Bacteria 49339
33 Ga0070679_100055227 3300005530 Unclassified 3955
34 Ga0070679_100075020 3300005530 Bacteria 3372
35 Ga0070697_100000435 3300005536 Bacteria 31985
36 Ga0068853_100212278 3300005539 Unclassified 1765
37 Ga0070693_100015449 3300005547 Bacteria 3931
38 Ga0068855_100000026 3300005563 Bacteria 175140
39 Ga0068855_100047478 3300005563 Bacteria 5073
40 Ga0068855_100054315 3300005563 Bacteria 4708
41 Ga0068855_100054945 3300005563 Bacteria 4678
42 Ga0068855_100100496 3300005563 Bacteria 3330
43 Ga0068857_100005877 3300005577 Bacteria 10474
44 Ga0068857_100007531 3300005577 Bacteria 9368
45 Ga0068857_100105380 3300005577 Bacteria 2532
46 Ga0068854_100004414 3300005578 Bacteria 8879
47 Ga0068856_100013501 3300005614 Bacteria 7907
48 Ga0068856_100024000 3300005614 Bacteria 5932
49 Ga0068856_100037135 3300005614 Bacteria 4779
50 Ga0068856_100083568 3300005614 Bacteria 3171
51 Ga0068852_100030596 3300005616 Bacteria 4434
52 Ga0068852_100043785 3300005616 Bacteria 3798
53 Ga0068860_100000019 3300005843 Bacteria 299860
54 Ga0068860_100023442 3300005843 Bacteria 5964
55 Ga0068862_100115335 3300005844 Bacteria 2362
56 Ga0081539_10001987 3300005985 Bacteria 31082
57 Ga0070717_10027713 3300006028 Bacteria 4529
58 Ga0070716_100086625 3300006173 Bacteria 1884
59 Ga0070712_100000020 3300006175 Bacteria 84120
60 Ga0070712_100001428 3300006175 Bacteria 14562
61 Ga0075366_10025788 3300006195 Unclassified 3438
62 Ga0097621_100062630 3300006237 Bacteria 3054
63 Ga0097621_100100023 3300006237 Bacteria 2438
64 Ga0068871_100015327 3300006358 Bacteria 5733
65 Ga0068871_100164694 3300006358 Bacteria 1897
66 Ga0068865_100000015 3300006881 Bacteria 129922
67 Ga0105250_10016150 3300009092 Bacteria 3047
68 Ga0105240_10014867 3300009093 Bacteria 10608
69 Ga0105240_10029180 3300009093 Bacteria 7193
70 Ga0105240_10069212 3300009093 Bacteria 4370
71 Ga0105240_10074831 3300009093 Bacteria 4179
72 Ga0105240_10220000 3300009093 Bacteria 2213
73 Ga0105245_10052718 3300009098 Bacteria 3649
74 Ga0105243_10154122 3300009148 Bacteria 1974
75 Ga0105241_10000230 3300009174 Bacteria 42250
76 Ga0105241_10020207 3300009174 Bacteria 4919
77 Ga0105241_10068008 3300009174 Bacteria 2758
78 Ga0105248_10039213 3300009177 Bacteria 5305
79 Ga0105237_10009566 3300009545 Bacteria 10377
80 Ga0105237_10009619 3300009545 Bacteria 10348
81 Ga0105237_10009851 3300009545 Bacteria 10215
82 Ga0105237_10104816 3300009545 Bacteria 2819
83 Ga0105237_10229562 3300009545 Unclassified 1857
84 Ga0105238_10011091 3300009551 Bacteria 9057
85 Ga0105238_10121797 3300009551 Bacteria 2588
86 Ga0105249_10006320 3300009553 Bacteria 10296
87 Ga0105239_10000004 3300010375 Bacteria 532483
88 Ga0105239_10000005 3300010375 Bacteria 496066
89 Ga0105239_10000173 3300010375 Bacteria 93289
90 Ga0105239_10056753 3300010375 Unclassified 4295
91 Ga0105239_10065327 3300010375 Bacteria 3996
92 Ga0105239_10124308 3300010375 Bacteria 2866
93 Ga0105239_10124635 3300010375 Unclassified 2863
94 Ga0105246_10009132 3300011119 Bacteria 6104
95 Ga0157373_10000064 3300013100 Bacteria 94176
96 Ga0157373_10000944 3300013100 Bacteria 22511
97 Ga0157373_10068973 3300013100 Bacteria 2500
98 Ga0157371_10004718 3300013102 Bacteria 11776
99 Ga0157371_10006874 3300013102 Bacteria 9289
100 Ga0157370_10036464 3300013104 Bacteria 4771
101 Ga0157370_10038412 3300013104 Bacteria 4630
102 Ga0157370_10086504 3300013104 Bacteria 2945
103 Ga0157370_10216019 3300013104 Bacteria 1777
104 Ga0157369_10026815 3300013105 Bacteria 6389
105 Ga0157369_10099968 3300013105 Bacteria 3092
106 Ga0157374_10001077 3300013296 Bacteria 23645
107 Ga0157374_10005238 3300013296 Bacteria 10876
108 Ga0157374_10013707 3300013296 Bacteria 7082
109 Ga0157374_10123631 3300013296 Bacteria 2499
110 Ga0157378_10003231 3300013297 Bacteria 14503
111 Ga0163162_10006145 3300013306 Bacteria 11622
112 Ga0163162_10019423 3300013306 Bacteria 6665
113 Ga0163162_10092258 3300013306 Bacteria 3112
114 Ga0157372_10000376 3300013307 Bacteria 49449
115 Ga0157372_10015376 3300013307 Bacteria 8201
116 Ga0157372_10041659 3300013307 Bacteria 5077
117 Ga0182008_10015431 3300014497 Bacteria 3985
118 Ga0157376_10093855 3300014969 Bacteria 2606
119 Ga0182006_1013089 3300015261 Bacteria 3611
120 Ga0182007_10008033 3300015262 Bacteria 4363
121 Ga0163161_10084052 3300017792 Bacteria 2347
122 Ga0213872_10010777 3300021361 Bacteria 4340
123 Ga0213872_10069759 3300021361 Bacteria 1585
124 Ga0224572_1003166 3300024225 Bacteria 2753
125 Ga0209437_100041 3300025233 Bacteria 444465
126 Ga0209646_1000045 3300025246 Bacteria 333765
127 Ga0209026_1000075 3300025250 Bacteria 202874
128 Ga0209233_1000978 3300025261 Bacteria 12282
129 Ga0207426_1000159 3300025302 Bacteria 175899
130 Ga0207656_10015806 3300025321 Bacteria 2927
131 Ga0207680_10060266 3300025903 Bacteria 2309
132 Ga0207647_10010756 3300025904 Bacteria 6444
133 Ga0207699_10006929 3300025906 Bacteria 5517
134 Ga0207645_10082892 3300025907 Unclassified 2056
135 Ga0207705_10000020 3300025909 Bacteria 311745
136 Ga0207705_10007952 3300025909 Bacteria 7779
137 Ga0207684_10003258 3300025910 Bacteria 15926
138 Ga0207654_10000040 3300025911 Bacteria 105600
139 Ga0207654_10006656 3300025911 Bacteria 5816
140 Ga0207707_10087074 3300025912 Bacteria 2729
141 Ga0207695_10000524 3300025913 Bacteria 81259
142 Ga0207695_10012394 3300025913 Bacteria 10238
143 Ga0207671_10000136 3300025914 Bacteria 112191
144 Ga0207671_10001987 3300025914 Bacteria 22556
145 Ga0207671_10006591 3300025914 Bacteria 10306
146 Ga0207671_10030017 3300025914 Bacteria 4056
147 Ga0207671_10082869 3300025914 Bacteria 2407
148 Ga0207693_10000243 3300025915 Bacteria 50405
149 Ga0207693_10001511 3300025915 Bacteria 20542
150 Ga0207663_10000901 3300025916 Bacteria 13557
151 Ga0207660_10000739 3300025917 Bacteria 21668
152 Ga0207660_10053422 3300025917 Bacteria 2879
153 Ga0207657_10005852 3300025919 Bacteria 12807
154 Ga0207657_10006763 3300025919 Bacteria 11843
155 Ga0207652_10004747 3300025921 Bacteria 11015
156 Ga0207652_10195801 3300025921 Bacteria 1818
157 Ga0207694_10086485 3300025924 Bacteria 2469
158 Ga0207687_10003667 3300025927 Bacteria 10345
159 Ga0207700_10000304 3300025928 Bacteria 29208
160 Ga0207664_10098870 3300025929 Bacteria 2407
161 Ga0207706_10005804 3300025933 Bacteria 11482
162 Ga0207709_10017822 3300025935 Bacteria 3969
163 Ga0207704_10000010 3300025938 Bacteria 188125
164 Ga0207711_10005378 3300025941 Bacteria 10836
165 Ga0207667_10000022 3300025949 Bacteria 369570
166 Ga0207667_10005440 3300025949 Bacteria 15522
167 Ga0207667_10038769 3300025949 Bacteria 5083
168 Ga0207667_10091754 3300025949 Unclassified 3137
169 Ga0207667_10135563 3300025949 Unclassified 2535
170 Ga0207712_10026471 3300025961 Bacteria 3865
171 Ga0207640_10003956 3300025981 Bacteria 7999
172 Ga0207658_10017185 3300025986 Bacteria 4984
173 Ga0207677_10004561 3300026023 Bacteria 7450
174 Ga0207677_10084868 3300026023 Unclassified 2284
175 Ga0207703_10093324 3300026035 Bacteria 2535
176 Ga0207639_10042532 3300026041 Bacteria 3405
177 Ga0207639_10091434 3300026041 Unclassified 2436
178 Ga0207678_10016084 3300026067 Bacteria 6569
179 Ga0207678_10044520 3300026067 Bacteria 3839
180 Ga0207702_10001126 3300026078 Bacteria 27293
181 Ga0207702_10027479 3300026078 Bacteria 4725
182 Ga0207648_10015339 3300026089 Bacteria 7050
183 Ga0207676_10024255 3300026095 Bacteria 4487
184 Ga0207674_10004479 3300026116 Bacteria 16801
185 Ga0207674_10024694 3300026116 Bacteria 6417
186 Ga0207674_10092251 3300026116 Bacteria 3018
187 Ga0207674_10154773 3300026116 Bacteria 2248
188 Ga0207698_10029086 3300026142 Bacteria 3952
189 Ga0268264_10000254 3300028381 Bacteria 98371
190 Ga0268264_10050496 3300028381 Bacteria 3463
191 Ga0307515_10000983 3300028794 Bacteria 65204
192 Ga0265338_10147511 3300028800 Bacteria 1833
193 Ga0307509_10037777 3300031507 Bacteria 5276
194 Ga0307412_10000009 3300031911 Bacteria 445987
195 Ga0307510_10116318 3300033180 Bacteria 2396
196 Ga0373935_0117746 3300035692 Unclassified 1771
197 Ga0395899_0008310 3300037312 Bacteria 7990
198 Ga0395900_0007515 3300037418 Bacteria 11260
199 Ga0395900_0036704 3300037418 Bacteria 5052
200 Ga0395898_0014020 3300037466 Bacteria 8236
201 Ga0436364_0906509 3300037853 Bacteria 3092
202 Ga0436364_1417996 3300037853 Bacteria 2587
203 Ga0395901_0013040 3300038443 Bacteria 8435
204 Ga0395901_0264858 3300038443 Bacteria 1788
205 Ga0436365_0117580 3300039437 Bacteria 8618
206 Ga0436360_0057515 3300039438 Bacteria 2375
207 Ga0436361_0108597 3300039447 Bacteria 2607
208 Ga0436361_0868006 3300039447 Bacteria 6366
209 Ga0453684_0001347 3300044712 Bacteria 71915
210 Ga0453684_0220250 3300044712 Bacteria 2199
211 Ga0451576_0259608 3300045051 Bacteria 1816
212 Ga0495580_0011304 3300046472 Bacteria 6909
213 Ga0495606_0000264 3300046507 Bacteria 92733
214 Ga0495610_0001928 3300046512 Bacteria 17885
215 Ga0495616_0035156 3300046513 Bacteria 2595
216 Ga0495648_0003034 3300046524 Bacteria 15033
217 Ga0495648_0031265 3300046524 Bacteria 3508
218 Ga0495648_0060295 3300046524 Bacteria 2258
219 Ga0495652_0001226 3300046529 Bacteria 28763
220 Ga0495652_0092487 3300046529 Bacteria 2471
221 Ga0495586_0002319 3300046535 Bacteria 10347
222 Ga0495633_0000804 3300046558 Bacteria 27892
223 Ga0495668_0050349 3300046616 Bacteria 2309
224 Ga0495625_0000211 3300046660 Bacteria 92222
225 Ga0495661_0003542 3300046665 Bacteria 11508
226 Ga0495649_0000090 3300046694 Bacteria 78509
227 Ga0495676_0056245 3300047321 Bacteria 3112
228 Ga0495687_000119 3300047443 Bacteria 121587
229 Ga0495686_0000098 3300047472 Bacteria 183131
230 Ga0496106_0065986 3300048909 Bacteria 2756
231 Ga0496108_0194152 3300048911 Bacteria 1760
232 Ga0496112_0110492 3300048915 Bacteria 2719
233 Ga0496125_0000029 3300048928 Bacteria 382675
234 Ga0501032_0094899 3300049569 Bacteria 1978
235 Ga0501034_0005861 3300049571 Bacteria 13363
236 Ga0501046_0000250 3300049580 Bacteria 55051
237 Ga0501047_0009355 3300049581 Bacteria 9254
238 nmdc:mga0k408_22246_c1 3300050493 Unclassified 3569
239 Ga0495619_0092594 3300053085 Bacteria 2048
240 Ga0500583_0012407 3300053092 Unclassified 3250
241 Ga0500622_0007866 3300053156 Bacteria 6005
242 2522551549 2522125168 Bacteria 7376607
243 2919441509 2919437846 Bacteria 6199444
244 2929179785 2929177148 Bacteria 7883697
245 2929924014 2929921140 Bacteria 8649150
246 2945982207 2945977869 Bacteria 7777518
247 2946018402 2946013367 Bacteria 7766675
248 3003233710 3003233435 Bacteria 4458031
249 8003157835 8003151029 Bacteria 8187759
250 rootH2_10079138
251 SwRhRL2b_contig_2056031
252 JGI24740J21852_10009228
253 JGI25162J39368_1000012
254 JGI25154J39366_1000008
255 JGI25157J39369_1003178
256 rootH2_10018501
257 Ga0065714_10003347
258 Ga0065704_10000208
259 Ga0070658_10159181
260 Ga0070676_10013189
261 Ga0070676_10040709
262 Ga0070683_100021249
263 Ga0070666_10016680
264 Ga0070680_100036799
265 Ga0068868_100097050
266 Ga0070660_100040511
267 Ga0070691_10001269
268 Ga0070661_100051175
269 Ga0070668_100009001
270 Ga0070659_100016622
271 Ga0070709_10000323
272 Ga0070709_10018116
273 Ga0070709_10059295
274 Ga0070713_100000034
275 Ga0070713_100002075
276 Ga0070713_100105232
277 Ga0070711_100000387
278 Ga0070663_100066650
279 Ga0070662_100023293
280 Ga0070681_10025134
281 Ga0070706_100000447
282 Ga0070679_100055227
283 Ga0070679_100075020
284 Ga0070697_100000435
285 Ga0068853_100212278
286 Ga0070693_100015449
287 Ga0068855_100000026
288 Ga0068855_100047478
289 Ga0068855_100054315
290 Ga0068855_100054945
291 Ga0068855_100100496
292 Ga0068857_100005877
293 Ga0068857_100007531
294 Ga0068857_100105380
295 Ga0068854_100004414
296 Ga0068856_100013501
297 Ga0068856_100024000
298 Ga0068856_100037135
299 Ga0068856_100083568
300 Ga0068852_100030596
301 Ga0068852_100043785
302 Ga0068860_100000019
303 Ga0068860_100023442
304 Ga0068862_100115335
305 Ga0081539_10001987
306 Ga0070717_10027713
307 Ga0070716_100086625
308 Ga0070712_100000020
309 Ga0070712_100001428
310 Ga0075366_10025788
311 Ga0097621_100062630
312 Ga0097621_100100023
313 Ga0068871_100015327
314 Ga0068871_100164694
315 Ga0068865_100000015
316 Ga0105250_10016150
317 Ga0105240_10014867
318 Ga0105240_10029180
319 Ga0105240_10069212
320 Ga0105240_10074831
321 Ga0105240_10220000
322 Ga0105245_10052718
323 Ga0105243_10154122
324 Ga0105241_10000230
325 Ga0105241_10020207
326 Ga0105241_10068008
327 Ga0105248_10039213
328 Ga0105237_10009566
329 Ga0105237_10009619
330 Ga0105237_10009851
331 Ga0105237_10104816
332 Ga0105237_10229562
333 Ga0105238_10011091
334 Ga0105238_10121797
335 Ga0105249_10006320
336 Ga0105239_10000004
337 Ga0105239_10000005
338 Ga0105239_10000173
339 Ga0105239_10056753
340 Ga0105239_10065327
341 Ga0105239_10124308
342 Ga0105239_10124635
343 Ga0105246_10009132
344 Ga0157373_10000064
345 Ga0157373_10000944
346 Ga0157373_10068973
347 Ga0157371_10004718
348 Ga0157371_10006874
349 Ga0157370_10036464
350 Ga0157370_10038412
351 Ga0157370_10086504
352 Ga0157370_10216019
353 Ga0157369_10026815
354 Ga0157369_10099968
355 Ga0157374_10001077
356 Ga0157374_10005238
357 Ga0157374_10013707
358 Ga0157374_10123631
359 Ga0157378_10003231
360 Ga0163162_10006145
361 Ga0163162_10019423
362 Ga0163162_10092258
363 Ga0157372_10000376
364 Ga0157372_10015376
365 Ga0157372_10041659
366 Ga0182008_10015431
367 Ga0157376_10093855
368 Ga0182006_1013089
369 Ga0182007_10008033
370 Ga0163161_10084052
371 Ga0213872_10010777
372 Ga0213872_10069759
373 Ga0224572_1003166
374 Ga0209437_100041
375 Ga0209646_1000045
376 Ga0209026_1000075
377 Ga0209233_1000978
378 Ga0207426_1000159
379 Ga0207656_10015806
380 Ga0207680_10060266
381 Ga0207647_10010756
382 Ga0207699_10006929
383 Ga0207645_10082892
384 Ga0207705_10000020
385 Ga0207705_10007952
386 Ga0207684_10003258
387 Ga0207654_10000040
388 Ga0207654_10006656
389 Ga0207707_10087074
390 Ga0207695_10000524
391 Ga0207695_10012394
392 Ga0207671_10000136
393 Ga0207671_10001987
394 Ga0207671_10006591
395 Ga0207671_10030017
396 Ga0207671_10082869
397 Ga0207693_10000243
398 Ga0207693_10001511
399 Ga0207663_10000901
400 Ga0207660_10000739
401 Ga0207660_10053422
402 Ga0207657_10005852
403 Ga0207657_10006763
404 Ga0207652_10004747
405 Ga0207652_10195801
406 Ga0207694_10086485
407 Ga0207687_10003667
408 Ga0207700_10000304
409 Ga0207664_10098870
410 Ga0207706_10005804
411 Ga0207709_10017822
412 Ga0207704_10000010
413 Ga0207711_10005378
414 Ga0207667_10000022
415 Ga0207667_10005440
416 Ga0207667_10038769
417 Ga0207667_10091754
418 Ga0207667_10135563
419 Ga0207712_10026471
420 Ga0207640_10003956
421 Ga0207658_10017185
422 Ga0207677_10004561
423 Ga0207677_10084868
424 Ga0207703_10093324
425 Ga0207639_10042532
426 Ga0207639_10091434
427 Ga0207678_10016084
428 Ga0207678_10044520
429 Ga0207702_10001126
430 Ga0207702_10027479
431 Ga0207648_10015339
432 Ga0207676_10024255
433 Ga0207674_10004479
434 Ga0207674_10024694
435 Ga0207674_10092251
436 Ga0207674_10154773
437 Ga0207698_10029086
438 Ga0268264_10000254
439 Ga0268264_10050496
440 Ga0307515_10000983
441 Ga0265338_10147511
442 Ga0307509_10037777
443 Ga0307412_10000009
444 Ga0307510_10116318
445 Ga0373935_0117746
446 Ga0395899_0008310
447 Ga0395900_0007515
448 Ga0395900_0036704
449 Ga0395898_0014020
450 Ga0436364_0906509
451 Ga0436364_1417996
452 Ga0395901_0013040
453 Ga0395901_0264858
454 Ga0436365_0117580
455 Ga0436360_0057515
456 Ga0436361_0108597
457 Ga0436361_0868006
458 Ga0453684_0001347
459 Ga0453684_0220250
460 Ga0451576_0259608
461 Ga0495580_0011304
462 Ga0495606_0000264
463 Ga0495610_0001928
464 Ga0495616_0035156
465 Ga0495648_0003034
466 Ga0495648_0031265
467 Ga0495648_0060295
468 Ga0495652_0001226
469 Ga0495652_0092487
470 Ga0495586_0002319
471 Ga0495633_0000804
472 Ga0495668_0050349
473 Ga0495625_0000211
474 Ga0495661_0003542
475 Ga0495649_0000090
476 Ga0495676_0056245
477 Ga0495687_000119
478 Ga0495686_0000098
479 Ga0496106_0065986
480 Ga0496108_0194152
481 Ga0496112_0110492
482 Ga0496125_0000029
483 Ga0501032_0094899
484 Ga0501034_0005861
485 Ga0501046_0000250
486 Ga0501047_0009355
487 nmdc:mga0k408_22246_c1
488 Ga0495619_0092594
489 Ga0500583_0012407
490 Ga0500622_0007866
491 2522551549
492 2919441509
493 2929179785
494 2929924014
495 2945982207
496 2946018402
497 3003233710
498 8003157835

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11762

Arabinose_Iso_C

L-arabinose isomerase C-terminal domain

428

568

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cx7-assembly1.cif.gz_C-2 crystal structure of arabinose isomerase from hybrid ai8 0.8772 6 477
7cyy-assembly1.cif.gz_E crystal structure of arabinose isomerase from hybrid ai8 with adonitol 0.8757 6 477
4r1p-assembly1.cif.gz_C crystal structure of thermophilic geobacillus kaustophilus l-arabinose isomerase with mn2+ 0.8745 6 477
4f2d-assembly1.cif.gz_A crystal structure of escherichia coli l-arabinose isomerase (ecai) complexed with ribitol 0.8737 7 477
7cyy-assembly1.cif.gz_A crystal structure of arabinose isomerase from hybrid ai8 with adonitol 0.8732 6 477
ID Description Score Start End Superfamily
4f2dC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8361 7 179 3.40.50.10940
4f2dC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8044 7 179 3.40.50.10940
1fuiF03 Alpha Beta;Alpha-Beta Barrel;L-fucose Isomerase; Chain A, domain 3;L-fucose/L-arabinose isomerase, C-terminal 0.7093 330 475 3.20.14.10
af_P02925_28_128_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.6683 9 103 3.40.50.2300
4lqlD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.6622 1 176 3.40.50.10940
ID Description Score Start End GO Terms
AF-A0A519XS50-F1-model_v4 Arabinose isomerase 0.9833 13 379 GO:0005829
GO:0008733
GO:0019569
GO:0046872
AF-Q28MP9-F1-model_v4 L-arabinose isomerase protein 0.9822 4 475 GO:0005829
GO:0008733
GO:0019569
GO:0046872
AF-A0A1V5J954-F1-model_v4 L-arabinose isomerase 0.9819 154 475 GO:0005829
GO:0008733
GO:0019569
GO:0046872
AF-A0A4R1SX33-F1-model_v4 deleted 0.9814 6 364
AF-A0A7V4IFZ3-F1-model_v4 Arabinose isomerase 0.9789 3 477 GO:0005829
GO:0008733
GO:0019569
GO:0046872

Map