F360485

General Info

Members Datasets Scaffolds Average Seq Length
249 173 498 729

Family's Representative Sequence

Representative Sequence 3300005339|Ga0070660_100039191|Ga0070660_1000391912
Length 760
Sequence MLLFTMPFQLESNYQPRGDQAQAIAKLAKSLEAGNQHQTLLGVTGSGKTFTIANVIREIDRPTLVISHNKTLAAQLYSEFKQFFPRNAVEYFVSYFDYYQPEAYIPRSDTYIEKDSSINEEIERLRLSATSALLSRRDVIVVASVSCIYGITSPEDYERMLLTVKRGQHTTREAILGRLVDMLYERNDMNFSRGRFRVRGDVVEVYPATADEEAVRIEFFGDEIDAITRFDPLTGHAREALSIITFFPAKQFVTPADKLNRALTTIRAELDDRIKVLESQNKLLEAQRLKMRTEYDLEMLQEMGFCSGIENYSRHLSGRPPGSKPYTIIDFFPKDFLTVVDESHATIPQIGGMYEGDKSRKTVLVDYGFRLPSALDNRPLNFPEFMKLTNQLVYVSATPAEFEIQNSIVGNAGYVPHKRARIGEDELVPFVLPGESVAAVNDRRTVGQARRLPSSGSAGGALALQLSRTDEPPEKFDVHTPGKPLVVEQIIRPTGLLDPRITIRGLKNQIDDTIELCRQRVEQQERVLVTTLTKRTAEDLADYLRDVGLKVRYLHSDIDTIERVEILRGLRAADFDILVGINLLREGLDLPEVSLVCILDADKEGFLRSQTSLIQTAGRAARHINGEVVLFADVVTDSMQALISISEYRRAKQMEYNEKHGITPQTVRRAVQESLHTILRGREIASSVINEAGGNFDLTELLRELEDEMQRASANLEFERAALLRDQIMEVKSGTGLSKIEPKRRPVKYTRNNGRRRSRV

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300002126 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 Metagenome Rhizosphere
4 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
105 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
106 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
107 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
108 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
111 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
112 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
140 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
147 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
167 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
168 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
171 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
172 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
173 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.2
Metatranscriptomes 0
Isolates 0.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.02
Nodule 0
Rhizoplane 4.82
Rhizosphere 88.35
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100039191 3300005339 Bacteria 3601
2 CNXas_1000123 3300000545 Bacteria 13860
3 JGI24035J26624_1000283 3300002126 Bacteria 4730
4 JGI24033J26618_1000329 3300002155 Bacteria 4945
5 JGI25406J46586_10000112 3300003203 Bacteria 35725
6 JGI25405J52794_10001288 3300003911 Bacteria 4079
7 Ga0065704_10080285 3300005289 Bacteria 3977
8 Ga0065715_10094904 3300005293 Bacteria 4215
9 Ga0070658_10009662 3300005327 Bacteria 7747
10 Ga0070676_10006435 3300005328 Bacteria 6277
11 Ga0070690_100014392 3300005330 Bacteria 4694
12 Ga0070670_100077923 3300005331 Bacteria 2847
13 Ga0070689_100005768 3300005340 Bacteria 8491
14 Ga0070689_100069594 3300005340 Bacteria 2746
15 Ga0070661_100007686 3300005344 Bacteria 7445
16 Ga0070661_100045767 3300005344 Bacteria 3199
17 Ga0070669_100005516 3300005353 Bacteria 9132
18 Ga0070675_100005429 3300005354 Bacteria 9746
19 Ga0070675_100014319 3300005354 Bacteria 6253
20 Ga0070671_100017275 3300005355 Bacteria 5842
21 Ga0070674_100005870 3300005356 Bacteria 7139
22 Ga0070688_100005280 3300005365 Bacteria 6794
23 Ga0070659_100006631 3300005366 Bacteria 8365
24 Ga0070667_100035961 3300005367 Bacteria 4150
25 Ga0070667_100109254 3300005367 Bacteria 2396
26 Ga0070701_10020814 3300005438 Bacteria 3120
27 Ga0070705_100004039 3300005440 Bacteria 7168
28 Ga0070708_100048897 3300005445 Bacteria 3741
29 Ga0070708_100062085 3300005445 Bacteria 3340
30 Ga0070678_100005706 3300005456 Bacteria 7232
31 Ga0070681_10093101 3300005458 Bacteria 2962
32 Ga0070706_100000035 3300005467 Bacteria 152107
33 Ga0070706_100007726 3300005467 Bacteria 10055
34 Ga0070706_100022740 3300005467 Bacteria 5774
35 Ga0070706_100051676 3300005467 Bacteria 3793
36 Ga0070706_100062530 3300005467 Bacteria 3440
37 Ga0070707_100001740 3300005468 Bacteria 20969
38 Ga0070707_100077065 3300005468 Bacteria 3216
39 Ga0070698_100001369 3300005471 Bacteria 27100
40 Ga0070698_100001500 3300005471 Bacteria 25924
41 Ga0070698_100006092 3300005471 Bacteria 13132
42 Ga0070699_100008480 3300005518 Bacteria 8904
43 Ga0070699_100041764 3300005518 Bacteria 3969
44 Ga0070684_100007688 3300005535 Bacteria 8405
45 Ga0070684_100014959 3300005535 Bacteria 6299
46 Ga0070697_100000569 3300005536 Bacteria 27841
47 Ga0070697_100005432 3300005536 Bacteria 9821
48 Ga0070697_100007588 3300005536 Bacteria 8442
49 Ga0070697_100062352 3300005536 Bacteria 3043
50 Ga0068853_100000043 3300005539 Bacteria 102800
51 Ga0070672_100023078 3300005543 Bacteria 4582
52 Ga0070665_100013857 3300005548 Bacteria 8109
53 Ga0070704_100003782 3300005549 Bacteria 8713
54 Ga0068855_100002235 3300005563 Bacteria 23937
55 Ga0070664_100036580 3300005564 Bacteria 4125
56 Ga0070664_100089865 3300005564 Bacteria 2658
57 Ga0068859_100019956 3300005617 Bacteria 6728
58 Ga0068863_100010523 3300005841 Bacteria 8984
59 Ga0068858_100026164 3300005842 Bacteria 5425
60 Ga0068860_100000199 3300005843 Bacteria 95791
61 Ga0068860_100010619 3300005843 Bacteria 9093
62 Ga0081455_10000222 3300005937 Bacteria 73055
63 Ga0081455_10013063 3300005937 Bacteria 8231
64 Ga0081540_1006191 3300005983 Bacteria 8771
65 Ga0081539_10000052 3300005985 Bacteria 268240
66 Ga0081539_10002689 3300005985 Bacteria 24122
67 Ga0081539_10006064 3300005985 Bacteria 11821
68 Ga0070717_10006106 3300006028 Bacteria 8847
69 Ga0097621_100017121 3300006237 Bacteria 5498
70 Ga0075428_100002779 3300006844 Bacteria 19065
71 Ga0075436_100009271 3300006914 Bacteria 6733
72 Ga0097620_100019956 3300006931 Bacteria 6728
73 Ga0105240_10006943 3300009093 Bacteria 16541
74 Ga0111539_10089844 3300009094 Bacteria 3610
75 Ga0114129_10007608 3300009147 Bacteria 15419
76 Ga0105242_10016112 3300009176 Bacteria 5807
77 Ga0105238_10004756 3300009551 Bacteria 13433
78 Ga0157373_10004560 3300013100 Bacteria 10419
79 Ga0157370_10012736 3300013104 Bacteria 8702
80 Ga0157369_10099068 3300013105 Bacteria 3107
81 Ga0157374_10000028 3300013296 Bacteria 213725
82 Ga0157374_10006427 3300013296 Bacteria 9979
83 Ga0157374_10016200 3300013296 Bacteria 6549
84 Ga0157378_10021388 3300013297 Bacteria 5688
85 Ga0157378_10102470 3300013297 Bacteria 2614
86 Ga0157378_10102643 3300013297 Bacteria 2612
87 Ga0163162_10006911 3300013306 Bacteria 11003
88 Ga0157372_10013093 3300013307 Bacteria 8851
89 Ga0157375_10017115 3300013308 Bacteria 6534
90 Ga0157375_10018585 3300013308 Bacteria 6305
91 Ga0157377_10021345 3300014745 Bacteria 3405
92 Ga0157379_10003916 3300014968 Bacteria 12692
93 Ga0157376_10006069 3300014969 Bacteria 8495
94 Ga0157376_10020333 3300014969 Bacteria 5134
95 Ga0157376_10030924 3300014969 Bacteria 4281
96 Ga0213872_10017508 3300021361 Bacteria 3310
97 Ga0213876_10005869 3300021384 Bacteria 6720
98 Ga0207666_1000764 3300025271 Bacteria 3862
99 Ga0209050_1001377 3300025298 Bacteria 26519
100 Ga0207697_10000337 3300025315 Bacteria 26165
101 Ga0207697_10000365 3300025315 Bacteria 25299
102 Ga0207697_10001852 3300025315 Bacteria 11314
103 Ga0207697_10003637 3300025315 Bacteria 7561
104 Ga0207697_10007802 3300025315 Bacteria 4739
105 Ga0207642_10019299 3300025899 Bacteria 2638
106 Ga0207688_10015021 3300025901 Bacteria 4201
107 Ga0207645_10004352 3300025907 Bacteria 10487
108 Ga0207705_10015339 3300025909 Bacteria 5497
109 Ga0207684_10000043 3300025910 Bacteria 259939
110 Ga0207684_10003873 3300025910 Bacteria 14362
111 Ga0207684_10006807 3300025910 Bacteria 10364
112 Ga0207707_10084090 3300025912 Bacteria 2779
113 Ga0207695_10005646 3300025913 Bacteria 16511
114 Ga0207671_10005534 3300025914 Bacteria 11610
115 Ga0207693_10009030 3300025915 Bacteria 8136
116 Ga0207693_10017727 3300025915 Bacteria 5677
117 Ga0207663_10031801 3300025916 Bacteria 3127
118 Ga0207662_10000089 3300025918 Bacteria 43194
119 Ga0207649_10002395 3300025920 Bacteria 10520
120 Ga0207646_10009019 3300025922 Bacteria 9912
121 Ga0207646_10017941 3300025922 Bacteria 6609
122 Ga0207646_10047964 3300025922 Bacteria 3829
123 Ga0207646_10109661 3300025922 Bacteria 2476
124 Ga0207681_10032132 3300025923 Bacteria 3434
125 Ga0207659_10012640 3300025926 Bacteria 5381
126 Ga0207664_10026757 3300025929 Bacteria 4363
127 Ga0207644_10004664 3300025931 Bacteria 8907
128 Ga0207644_10063352 3300025931 Bacteria 2684
129 Ga0207706_10000188 3300025933 Bacteria 68890
130 Ga0207686_10005931 3300025934 Bacteria 6555
131 Ga0207670_10003467 3300025936 Bacteria 8365
132 Ga0207670_10008665 3300025936 Bacteria 5756
133 Ga0207670_10068121 3300025936 Bacteria 2451
134 Ga0207669_10007634 3300025937 Bacteria 5020
135 Ga0207665_10012982 3300025939 Bacteria 5477
136 Ga0207691_10000402 3300025940 Bacteria 43303
137 Ga0207691_10005768 3300025940 Bacteria 11980
138 Ga0207691_10046677 3300025940 Bacteria 3978
139 Ga0207667_10003901 3300025949 Bacteria 18340
140 Ga0207712_10012926 3300025961 Bacteria 5343
141 Ga0207703_10013543 3300026035 Bacteria 6353
142 Ga0207703_10057594 3300026035 Bacteria 3169
143 Ga0207639_10000002 3300026041 Bacteria 903066
144 Ga0207708_10003672 3300026075 Bacteria 11335
145 Ga0207641_10019676 3300026088 Bacteria 5542
146 Ga0207683_10004421 3300026121 Bacteria 12149
147 Ga0207683_10016472 3300026121 Bacteria 6291
148 Ga0207683_10020284 3300026121 Bacteria 5684
149 Ga0207683_10039274 3300026121 Bacteria 4129
150 Ga0268266_10023954 3300028379 Bacteria 5194
151 Ga0268264_10006562 3300028381 Bacteria 9795
152 Ga0265337_1003596 3300028556 Bacteria 6663
153 Ga0265338_10010172 3300028800 Bacteria 11088
154 Ga0265338_10021293 3300028800 Bacteria 6767
155 Ga0265338_10030393 3300028800 Bacteria 5323
156 Ga0265324_10000822 3300029957 Bacteria 20180
157 Ga0265320_10000363 3300031240 Bacteria 36831
158 Ga0265320_10019375 3300031240 Bacteria 3721
159 Ga0265320_10021168 3300031240 Bacteria 3504
160 Ga0265329_10003893 3300031242 Bacteria 6395
161 Ga0265339_10015906 3300031249 Bacteria 4497
162 Ga0265327_10001236 3300031251 Bacteria 34281
163 Ga0265327_10007800 3300031251 Bacteria 8155
164 Ga0265327_10009769 3300031251 Bacteria 6862
165 Ga0265314_10000147 3300031711 Bacteria 105307
166 Ga0316577_10023144 3300031733 Bacteria 3450
167 Ga0307409_100033937 3300031995 Bacteria 3720
168 Ga0307415_100041313 3300032126 Bacteria 3061
169 Ga0373955_0015870 3300035172 Bacteria 3696
170 Ga0373937_0040835 3300036401 Bacteria 4230
171 Ga0316582_0000011 3300036647 Bacteria 42742
172 Ga0316582_0027730 3300036647 Bacteria 3424
173 Ga0373925_0037163 3300037068 Bacteria 3594
174 Ga0395899_0003110 3300037312 Bacteria 13215
175 Ga0395899_0012096 3300037312 Bacteria 6610
176 Ga0395900_0010120 3300037418 Bacteria 9646
177 Ga0395900_0024462 3300037418 Bacteria 6185
178 Ga0395898_0000026 3300037466 Bacteria 374440
179 Ga0395898_0029377 3300037466 Bacteria 5507
180 Ga0395905_0015762 3300037471 Bacteria 7180
181 Ga0316581_0000644 3300037588 Bacteria 6993
182 Ga0395901_0001326 3300038443 Bacteria 26051
183 Ga0436365_1003296 3300039437 Bacteria 2728
184 Ga0436365_1112867 3300039437 Bacteria 50005
185 Ga0436360_0127883 3300039438 Bacteria 4031
186 Ga0436360_0705195 3300039438 Bacteria 3800
187 Ga0436360_1160050 3300039438 Bacteria 3077
188 Ga0436361_0155125 3300039447 Bacteria 10559
189 Ga0436361_0405526 3300039447 Bacteria 11056
190 Ga0436361_0418443 3300039447 Bacteria 4636
191 Ga0436361_0653751 3300039447 Bacteria 5068
192 Ga0436361_0919430 3300039447 Bacteria 4285
193 Ga0436363_0386426 3300039450 Bacteria 19811
194 Ga0436363_0803061 3300039450 Bacteria 15961
195 Ga0436362_0489247 3300039453 Bacteria 2641
196 Ga0436362_0618957 3300039453 Bacteria 3439
197 Ga0451577_0001851 3300042876 Bacteria 26948
198 Ga0466965_0005907 3300044683 Bacteria 5527
199 Ga0453684_0021003 3300044712 Bacteria 9790
200 Ga0466971_0000024 3300044719 Bacteria 66749
201 Ga0451576_0048183 3300045051 Bacteria 4478
202 Ga0451576_0058058 3300045051 Bacteria 4044
203 Ga0495618_0042336 3300046514 Bacteria 2870
204 Ga0495628_0039632 3300046516 Bacteria 3767
205 Ga0495630_0007103 3300046517 Bacteria 7978
206 Ga0495643_0000057 3300046522 Bacteria 195145
207 Ga0495652_0013583 3300046529 Bacteria 7329
208 Ga0495586_0009785 3300046535 Bacteria 5104
209 Ga0495599_0005310 3300046678 Bacteria 7685
210 Ga0495599_0016344 3300046678 Bacteria 4607
211 Ga0496101_0008508 3300048904 Bacteria 6707
212 Ga0496102_0019768 3300048905 Bacteria 5936
213 Ga0496106_0009255 3300048909 Bacteria 7279
214 Ga0496107_0002913 3300048910 Bacteria 11313
215 Ga0496110_0007596 3300048913 Bacteria 8664
216 Ga0496111_0074121 3300048914 Bacteria 2479
217 Ga0496112_0009211 3300048915 Bacteria 8874
218 Ga0496112_0054641 3300048915 Bacteria 3924
219 Ga0496115_0002837 3300048918 Bacteria 12468
220 Ga0496115_0007492 3300048918 Bacteria 8034
221 Ga0496115_0008229 3300048918 Bacteria 7706
222 Ga0496125_0000110 3300048928 Bacteria 192693
223 Ga0501031_0000126 3300049568 Bacteria 42484
224 Ga0501032_0000152 3300049569 Bacteria 55627
225 Ga0501032_0054708 3300049569 Bacteria 2686
226 Ga0501033_0000007 3300049570 Bacteria 303981
227 Ga0501033_0000021 3300049570 Bacteria 192208
228 Ga0501037_0000051 3300049573 Bacteria 111193
229 Ga0501039_0001129 3300049575 Bacteria 19644
230 Ga0501043_0033318 3300049579 Bacteria 4053
231 Ga0501047_0020984 3300049581 Bacteria 6275
232 Ga0501070_0004455 3300049586 Bacteria 12031
233 Ga0501080_0042801 3300049742 Bacteria 4216
234 Ga0501035_0000002 3300049822 Bacteria 585447
235 Ga0501044_0014889 3300049823 Bacteria 8385
236 nmdc:mga00v17_24454_c1 3300050491 Bacteria 3505
237 nmdc:mga05p37_4487_c1 3300050507 Bacteria 16319
238 nmdc:mga08x19_19673_c1 3300050514 Bacteria 4146
239 Ga0500566_0000970 3300053094 Bacteria 16532
240 Ga0500555_000004 3300053103 Bacteria 343705
241 Ga0500555_000858 3300053103 Bacteria 10848
242 Ga0500556_0000453 3300053104 Bacteria 29167
243 Ga0500556_0002270 3300053104 Bacteria 6356
244 Ga0500642_0002936 3300053130 Bacteria 5075
245 Ga0500616_0004281 3300053153 Bacteria 10250
246 Ga0500645_005940 3300053730 Bacteria 4423
247 Ga0466962_0000031 3300061719 Bacteria 68489
248 2787438213 2786546517 Bacteria 6614109
249 2787508993 2786546548 Bacteria 4745694
250 Ga0070660_100039191
251 CNXas_1000123
252 JGI24035J26624_1000283
253 JGI24033J26618_1000329
254 JGI25406J46586_10000112
255 JGI25405J52794_10001288
256 Ga0065704_10080285
257 Ga0065715_10094904
258 Ga0070658_10009662
259 Ga0070676_10006435
260 Ga0070690_100014392
261 Ga0070670_100077923
262 Ga0070689_100005768
263 Ga0070689_100069594
264 Ga0070661_100007686
265 Ga0070661_100045767
266 Ga0070669_100005516
267 Ga0070675_100005429
268 Ga0070675_100014319
269 Ga0070671_100017275
270 Ga0070674_100005870
271 Ga0070688_100005280
272 Ga0070659_100006631
273 Ga0070667_100035961
274 Ga0070667_100109254
275 Ga0070701_10020814
276 Ga0070705_100004039
277 Ga0070708_100048897
278 Ga0070708_100062085
279 Ga0070678_100005706
280 Ga0070681_10093101
281 Ga0070706_100000035
282 Ga0070706_100007726
283 Ga0070706_100022740
284 Ga0070706_100051676
285 Ga0070706_100062530
286 Ga0070707_100001740
287 Ga0070707_100077065
288 Ga0070698_100001369
289 Ga0070698_100001500
290 Ga0070698_100006092
291 Ga0070699_100008480
292 Ga0070699_100041764
293 Ga0070684_100007688
294 Ga0070684_100014959
295 Ga0070697_100000569
296 Ga0070697_100005432
297 Ga0070697_100007588
298 Ga0070697_100062352
299 Ga0068853_100000043
300 Ga0070672_100023078
301 Ga0070665_100013857
302 Ga0070704_100003782
303 Ga0068855_100002235
304 Ga0070664_100036580
305 Ga0070664_100089865
306 Ga0068859_100019956
307 Ga0068863_100010523
308 Ga0068858_100026164
309 Ga0068860_100000199
310 Ga0068860_100010619
311 Ga0081455_10000222
312 Ga0081455_10013063
313 Ga0081540_1006191
314 Ga0081539_10000052
315 Ga0081539_10002689
316 Ga0081539_10006064
317 Ga0070717_10006106
318 Ga0097621_100017121
319 Ga0075428_100002779
320 Ga0075436_100009271
321 Ga0097620_100019956
322 Ga0105240_10006943
323 Ga0111539_10089844
324 Ga0114129_10007608
325 Ga0105242_10016112
326 Ga0105238_10004756
327 Ga0157373_10004560
328 Ga0157370_10012736
329 Ga0157369_10099068
330 Ga0157374_10000028
331 Ga0157374_10006427
332 Ga0157374_10016200
333 Ga0157378_10021388
334 Ga0157378_10102470
335 Ga0157378_10102643
336 Ga0163162_10006911
337 Ga0157372_10013093
338 Ga0157375_10017115
339 Ga0157375_10018585
340 Ga0157377_10021345
341 Ga0157379_10003916
342 Ga0157376_10006069
343 Ga0157376_10020333
344 Ga0157376_10030924
345 Ga0213872_10017508
346 Ga0213876_10005869
347 Ga0207666_1000764
348 Ga0209050_1001377
349 Ga0207697_10000337
350 Ga0207697_10000365
351 Ga0207697_10001852
352 Ga0207697_10003637
353 Ga0207697_10007802
354 Ga0207642_10019299
355 Ga0207688_10015021
356 Ga0207645_10004352
357 Ga0207705_10015339
358 Ga0207684_10000043
359 Ga0207684_10003873
360 Ga0207684_10006807
361 Ga0207707_10084090
362 Ga0207695_10005646
363 Ga0207671_10005534
364 Ga0207693_10009030
365 Ga0207693_10017727
366 Ga0207663_10031801
367 Ga0207662_10000089
368 Ga0207649_10002395
369 Ga0207646_10009019
370 Ga0207646_10017941
371 Ga0207646_10047964
372 Ga0207646_10109661
373 Ga0207681_10032132
374 Ga0207659_10012640
375 Ga0207664_10026757
376 Ga0207644_10004664
377 Ga0207644_10063352
378 Ga0207706_10000188
379 Ga0207686_10005931
380 Ga0207670_10003467
381 Ga0207670_10008665
382 Ga0207670_10068121
383 Ga0207669_10007634
384 Ga0207665_10012982
385 Ga0207691_10000402
386 Ga0207691_10005768
387 Ga0207691_10046677
388 Ga0207667_10003901
389 Ga0207712_10012926
390 Ga0207703_10013543
391 Ga0207703_10057594
392 Ga0207639_10000002
393 Ga0207708_10003672
394 Ga0207641_10019676
395 Ga0207683_10004421
396 Ga0207683_10016472
397 Ga0207683_10020284
398 Ga0207683_10039274
399 Ga0268266_10023954
400 Ga0268264_10006562
401 Ga0265337_1003596
402 Ga0265338_10010172
403 Ga0265338_10021293
404 Ga0265338_10030393
405 Ga0265324_10000822
406 Ga0265320_10000363
407 Ga0265320_10019375
408 Ga0265320_10021168
409 Ga0265329_10003893
410 Ga0265339_10015906
411 Ga0265327_10001236
412 Ga0265327_10007800
413 Ga0265327_10009769
414 Ga0265314_10000147
415 Ga0316577_10023144
416 Ga0307409_100033937
417 Ga0307415_100041313
418 Ga0373955_0015870
419 Ga0373937_0040835
420 Ga0316582_0000011
421 Ga0316582_0027730
422 Ga0373925_0037163
423 Ga0395899_0003110
424 Ga0395899_0012096
425 Ga0395900_0010120
426 Ga0395900_0024462
427 Ga0395898_0000026
428 Ga0395898_0029377
429 Ga0395905_0015762
430 Ga0316581_0000644
431 Ga0395901_0001326
432 Ga0436365_1003296
433 Ga0436365_1112867
434 Ga0436360_0127883
435 Ga0436360_0705195
436 Ga0436360_1160050
437 Ga0436361_0155125
438 Ga0436361_0405526
439 Ga0436361_0418443
440 Ga0436361_0653751
441 Ga0436361_0919430
442 Ga0436363_0386426
443 Ga0436363_0803061
444 Ga0436362_0489247
445 Ga0436362_0618957
446 Ga0451577_0001851
447 Ga0466965_0005907
448 Ga0453684_0021003
449 Ga0466971_0000024
450 Ga0451576_0048183
451 Ga0451576_0058058
452 Ga0495618_0042336
453 Ga0495628_0039632
454 Ga0495630_0007103
455 Ga0495643_0000057
456 Ga0495652_0013583
457 Ga0495586_0009785
458 Ga0495599_0005310
459 Ga0495599_0016344
460 Ga0496101_0008508
461 Ga0496102_0019768
462 Ga0496106_0009255
463 Ga0496107_0002913
464 Ga0496110_0007596
465 Ga0496111_0074121
466 Ga0496112_0009211
467 Ga0496112_0054641
468 Ga0496115_0002837
469 Ga0496115_0007492
470 Ga0496115_0008229
471 Ga0496125_0000110
472 Ga0501031_0000126
473 Ga0501032_0000152
474 Ga0501032_0054708
475 Ga0501033_0000007
476 Ga0501033_0000021
477 Ga0501037_0000051
478 Ga0501039_0001129
479 Ga0501043_0033318
480 Ga0501047_0020984
481 Ga0501070_0004455
482 Ga0501080_0042801
483 Ga0501035_0000002
484 Ga0501044_0014889
485 nmdc:mga00v17_24454_c1
486 nmdc:mga05p37_4487_c1
487 nmdc:mga08x19_19673_c1
488 Ga0500566_0000970
489 Ga0500555_000004
490 Ga0500555_000858
491 Ga0500556_0000453
492 Ga0500556_0002270
493 Ga0500642_0002936
494 Ga0500616_0004281
495 Ga0500645_005940
496 Ga0466962_0000031
497 2787438213
498 2787508993

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17757

UvrB_inter

UvrB interaction domain

162

252

0.99

PF12344

UvrB

Ultra-violet resistance protein B

630

672

0.97

PF02151

UVR

UvrB/uvrC motif

699

734

0.94

PF00271

Helicase_C

Helicase conserved C-terminal domain

508

624

0.9

PF04851

ResIII

Type III restriction enzyme, res subunit

13

142

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fpn-assembly3.cif.gz_B crystal structure of uvra-uvrb interaction domains 0.9761 156 248
7egt-assembly2.cif.gz_C the crystal structure of the c-terminal domain of t. thermophilus uvrd complexed with the n-terminal domain of uvrb 0.9734 2 398
6o8g-assembly2.cif.gz_B crystal structure of uvrb bound to fully duplex dna 0.9596 1 651
6o8g-assembly1.cif.gz_A crystal structure of uvrb bound to fully duplex dna 0.9579 1 642
6o8g-assembly2.cif.gz_B crystal structure of uvrb bound to fully duplex dna 0.9579 1 651
ID Description Score Start End Superfamily
2fdcB03 Special;Helix non-globular;Helix Hairpins; 1.004 249 311 6.10.140.240
1t5lB03 Special;Helix non-globular;Helix Hairpins; 1.001 249 311 6.10.140.240
1t5lA03 Special;Helix non-globular;Helix Hairpins; 1 249 311 6.10.140.240
1c4oA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9773 2 145 3.40.50.300
2fdcB03 Special;Helix non-globular;Helix Hairpins; 0.9729 249 311 6.10.140.240
ID Description Score Start End GO Terms
AF-A0A351FQL2-F1-model_v4 Excinuclease ABC subunit B 0.9784 247 399 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-X1QNI8-F1-model_v4 UvrB interaction domain-containing protein 0.9726 104 348 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-A0A351FQL2-F1-model_v4 Excinuclease ABC subunit B 0.9721 247 399 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-A0A2V6D1T3-F1-model_v4 Excinuclease ABC subunit B 0.9699 1 273 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887
AF-X1QNI8-F1-model_v4 UvrB interaction domain-containing protein 0.9687 104 348 GO:0003677
GO:0005524
GO:0006289
GO:0009380
GO:0016887

Map