F360855

General Info

Members Datasets Scaffolds Average Seq Length
249 183 498 419

Family's Representative Sequence

Representative Sequence 3300031665|Ga0316575_10044355|Ga0316575_100443552
Length 441
Sequence MPQCHNLLSEKPANSAANVKLLVIGSGGREHAIAWKLAQSPRVQKIFVAPGNGGTARESGLENVALRETDELIEFARKEGIQLTVVGPEAPLAHGVVDAFRDAGLRIFGPTRAAAQLESSKDFAKRFMVRHGLPTARYATFERAADAKAYVAEQGAPIVVKADGLAAGKGVVVASSVAEANDAIDGMLLSNRLGEAGARVVIEQCLEGEEASFIVICDGRHALPLATSQDHKRLRDGDEGPNTGGMGAYSPAPVVTPKLHARVMREIIQPTIQGMARDGLPYVGFLYAGLMIDREGRPLTLEFNCRLGDPEAQPILMRLKSDLLALIESALDRKLEQATAEWDRRSALGVVLAARGYPEHPVAGDRIEGIPAPSEDCRVFHAGSRLDGGQLVTSGGRVLCVTALGDSLRVARQRAYAATEGIRFEGMQYRHDIGSRGLRRA

Samples

Sample ID Description Type Environment
1 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
118 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
124 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
125 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
126 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
127 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
137 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
142 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
174 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
175 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
176 2643221593 Lysobacter sp. Root690 Isolate Unclassified
177 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
178 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
179 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
180 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
181 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
182 639633007 Azoarcus olearius BH72 Isolate Unclassified
183 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.98
Metatranscriptomes 0
Isolates 4.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.22
Nodule 0
Rhizoplane 1.2
Rhizosphere 89.56
Stem 0
Stem Tuber 0
Unclassified 0.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316575_10044355 3300031665 Bacteria 1764
2 JGI24736J21556_1002016 3300001904 Bacteria 3611
3 Ga0055526_1000183 3300003771 Bacteria 54759
4 Ga0055537_1000314 3300003773 Bacteria 33100
5 Ga0055524_1000461 3300003775 Bacteria 33100
6 Ga0055534_1000302 3300003784 Bacteria 33100
7 Ga0055528_1000172 3300003790 Bacteria 54759
8 Ga0065712_10092459 3300005290 Bacteria 2330
9 Ga0070658_10001451 3300005327 Bacteria 20221
10 Ga0070658_10002163 3300005327 Bacteria 16493
11 Ga0070658_10122412 3300005327 Bacteria 2162
12 Ga0070658_10130149 3300005327 Bacteria 2097
13 Ga0070683_100047927 3300005329 Bacteria 3950
14 Ga0070670_100022098 3300005331 Bacteria 5476
15 Ga0070670_100047809 3300005331 Bacteria 3682
16 Ga0070670_100113357 3300005331 Bacteria 2337
17 Ga0070666_10000001 3300005335 Bacteria 543080
18 Ga0070680_100084577 3300005336 Bacteria 2620
19 Ga0068868_100034357 3300005338 Bacteria 3914
20 Ga0068868_100104296 3300005338 Bacteria 2298
21 Ga0070661_100050895 3300005344 Bacteria 3031
22 Ga0070661_100068874 3300005344 Bacteria 2601
23 Ga0070668_100008699 3300005347 Bacteria 7541
24 Ga0070669_100019060 3300005353 Bacteria 4904
25 Ga0070669_100026313 3300005353 Bacteria 4185
26 Ga0070675_100001090 3300005354 Bacteria 19580
27 Ga0070667_100006964 3300005367 Bacteria 9393
28 Ga0070667_100024396 3300005367 Bacteria 5023
29 Ga0070713_100000026 3300005436 Bacteria 95308
30 Ga0070705_100054640 3300005440 Bacteria 2343
31 Ga0070694_100078165 3300005444 Bacteria 2294
32 Ga0070663_100197597 3300005455 Bacteria 1568
33 Ga0070672_100003340 3300005543 Bacteria 10399
34 Ga0070665_100000500 3300005548 Bacteria 56157
35 Ga0070665_100064722 3300005548 Bacteria 3667
36 Ga0068854_100021922 3300005578 Bacteria 4342
37 Ga0068856_100280167 3300005614 Bacteria 1684
38 Ga0070702_100091494 3300005615 Bacteria 1846
39 Ga0068852_100001416 3300005616 Bacteria 16183
40 Ga0068859_100069907 3300005617 Bacteria 3546
41 Ga0068859_100126498 3300005617 Bacteria 2625
42 Ga0068864_100195923 3300005618 Bacteria 1854
43 Ga0068864_100226825 3300005618 Bacteria 1726
44 Ga0068851_10000579 3300005834 Bacteria 15948
45 Ga0068863_100066337 3300005841 Bacteria 3414
46 Ga0068858_100008521 3300005842 Bacteria 9854
47 Ga0068858_100050246 3300005842 Bacteria 3859
48 Ga0068860_100031155 3300005843 Bacteria 5128
49 Ga0097621_100200177 3300006237 Bacteria 1733
50 Ga0068871_100014488 3300006358 Bacteria 5882
51 Ga0075428_100141095 3300006844 Bacteria 2620
52 Ga0075428_100347598 3300006844 Unclassified 1592
53 Ga0075430_100000168 3300006846 Bacteria 43228
54 Ga0075431_100100653 3300006847 Bacteria 2982
55 Ga0075434_100023710 3300006871 Bacteria 5985
56 Ga0075436_100000087 3300006914 Bacteria 53435
57 Ga0075436_100023836 3300006914 Bacteria 4205
58 Ga0075436_100122846 3300006914 Bacteria 1818
59 Ga0097620_100069906 3300006931 Bacteria 3546
60 Ga0097620_100126508 3300006931 Bacteria 2625
61 Ga0105240_10003669 3300009093 Bacteria 23752
62 Ga0105240_10091572 3300009093 Bacteria 3714
63 Ga0105240_10108343 3300009093 Bacteria 3366
64 Ga0105240_10293025 3300009093 Bacteria 1865
65 Ga0111539_10001041 3300009094 Bacteria 36433
66 Ga0111539_10011775 3300009094 Bacteria 10966
67 Ga0105245_10009332 3300009098 Bacteria 8556
68 Ga0114129_10059465 3300009147 Bacteria 5343
69 Ga0114129_10126481 3300009147 Bacteria 3513
70 Ga0105243_10011438 3300009148 Bacteria 6715
71 Ga0105241_10007309 3300009174 Bacteria 8124
72 Ga0105242_10028686 3300009176 Bacteria 4432
73 Ga0105237_10054017 3300009545 Bacteria 4026
74 Ga0105237_10123104 3300009545 Bacteria 2588
75 Ga0105238_10000729 3300009551 Bacteria 34322
76 Ga0105238_10277365 3300009551 Bacteria 1657
77 Ga0105249_10021158 3300009553 Bacteria 5823
78 Ga0105239_10047440 3300010375 Bacteria 4707
79 Ga0157374_10164150 3300013296 Bacteria 2164
80 Ga0163162_10002846 3300013306 Bacteria 16475
81 Ga0157375_10034169 3300013308 Bacteria 4841
82 Ga0163163_10007811 3300014325 Bacteria 9455
83 Ga0163163_10033419 3300014325 Bacteria 4975
84 Ga0157380_10181899 3300014326 Bacteria 1848
85 Ga0157376_10033570 3300014969 Bacteria 4132
86 Ga0163161_10024406 3300017792 Bacteria 4271
87 Ga0209565_1000002 3300025263 Bacteria 1423083
88 Ga0209673_1000002 3300025273 Bacteria 1423083
89 Ga0209675_1000002 3300025291 Bacteria 1423083
90 Ga0209564_1000004 3300025295 Bacteria 1424639
91 Ga0209758_1019238 3300025297 Bacteria 3302
92 Ga0209256_1000004 3300025299 Bacteria 1424643
93 Ga0209256_1002878 3300025299 Bacteria 13053
94 Ga0209256_1008184 3300025299 Bacteria 4912
95 Ga0207680_10000003 3300025903 Bacteria 925264
96 Ga0207680_10043101 3300025903 Bacteria 2644
97 Ga0207647_10000134 3300025904 Bacteria 58301
98 Ga0207645_10030332 3300025907 Bacteria 3484
99 Ga0207643_10087229 3300025908 Bacteria 1814
100 Ga0207705_10001085 3300025909 Bacteria 22127
101 Ga0207705_10020432 3300025909 Bacteria 4732
102 Ga0207695_10099546 3300025913 Bacteria 2905
103 Ga0207695_10117615 3300025913 Bacteria 2630
104 Ga0207660_10139947 3300025917 Bacteria 1850
105 Ga0207681_10170891 3300025923 Bacteria 1647
106 Ga0207694_10000336 3300025924 Bacteria 44443
107 Ga0207694_10001480 3300025924 Bacteria 20064
108 Ga0207650_10036732 3300025925 Bacteria 3565
109 Ga0207659_10000430 3300025926 Bacteria 25306
110 Ga0207659_10061797 3300025926 Bacteria 2701
111 Ga0207687_10008574 3300025927 Bacteria 6685
112 Ga0207700_10000093 3300025928 Bacteria 54495
113 Ga0207706_10000792 3300025933 Bacteria 32696
114 Ga0207706_10054329 3300025933 Bacteria 3535
115 Ga0207686_10008451 3300025934 Bacteria 5558
116 Ga0207709_10021187 3300025935 Bacteria 3677
117 Ga0207670_10067572 3300025936 Bacteria 2460
118 Ga0207704_10178238 3300025938 Bacteria 1533
119 Ga0207651_10069653 3300025960 Bacteria 2485
120 Ga0207712_10000168 3300025961 Bacteria 67505
121 Ga0207640_10019455 3300025981 Bacteria 4011
122 Ga0207658_10008520 3300025986 Bacteria 6976
123 Ga0207658_10011370 3300025986 Bacteria 6057
124 Ga0207658_10054203 3300025986 Bacteria 2966
125 Ga0207677_10160736 3300026023 Bacteria 1745
126 Ga0207703_10001738 3300026035 Bacteria 19551
127 Ga0207703_10119114 3300026035 Bacteria 2264
128 Ga0207639_10000218 3300026041 Bacteria 42765
129 Ga0207678_10224156 3300026067 Bacteria 1609
130 Ga0207702_10017327 3300026078 Bacteria 5961
131 Ga0207648_10058346 3300026089 Bacteria 3366
132 Ga0207648_10123377 3300026089 Bacteria 2278
133 Ga0207676_10177709 3300026095 Bacteria 1861
134 Ga0207683_10003106 3300026121 Bacteria 14512
135 Ga0207428_10004837 3300027907 Bacteria 12715
136 Ga0268266_10000007 3300028379 Bacteria 1372921
137 Ga0268266_10000011 3300028379 Bacteria 757403
138 Ga0268265_10007970 3300028380 Bacteria 7150
139 Ga0268264_10283559 3300028381 Bacteria 1553
140 Ga0265331_10085333 3300031250 Bacteria 1463
141 Ga0265327_10004834 3300031251 Bacteria 11673
142 Ga0307414_10000355 3300032004 Bacteria 25528
143 Ga0307414_10003116 3300032004 Bacteria 8797
144 Ga0316574_0002002 3300035398 Bacteria 10028
145 Ga0373935_0036509 3300035692 Bacteria 3072
146 Ga0436365_0309204 3300039437 Bacteria 21196
147 Ga0436362_0248446 3300039453 Bacteria 1461
148 Ga0451793_0337057 3300041452 Bacteria 3798
149 Ga0451577_0024139 3300042876 Bacteria 5532
150 Ga0453684_0015392 3300044712 Bacteria 12108
151 Ga0451576_0000006 3300045051 Bacteria 949698
152 Ga0451576_0001787 3300045051 Bacteria 35253
153 Ga0451576_0002337 3300045051 Bacteria 28649
154 Ga0451576_0150817 3300045051 Bacteria 2424
155 Ga0495592_0000583 3300046454 Bacteria 25922
156 Ga0495638_0000236 3300046460 Bacteria 75732
157 Ga0495641_0029259 3300046461 Bacteria 2656
158 Ga0495653_0034717 3300046463 Bacteria 3985
159 Ga0495639_0032824 3300046475 Bacteria 2317
160 Ga0495662_0027536 3300046476 Bacteria 2745
161 Ga0495608_0035935 3300046511 Bacteria 3337
162 Ga0495618_0006204 3300046514 Bacteria 7251
163 Ga0495628_0038901 3300046516 Bacteria 3805
164 Ga0495630_0001001 3300046517 Bacteria 19663
165 Ga0495666_0008510 3300046526 Bacteria 5144
166 Ga0495640_0051382 3300046533 Bacteria 2833
167 Ga0495586_0016858 3300046535 Bacteria 3887
168 Ga0495587_0017973 3300046536 Bacteria 4384
169 Ga0495634_0024916 3300046642 Bacteria 4193
170 Ga0495635_0049895 3300046663 Bacteria 2885
171 Ga0495647_0020737 3300046681 Bacteria 2362
172 Ga0495658_0002442 3300046683 Bacteria 9352
173 Ga0495669_0059854 3300046684 Bacteria 1721
174 Ga0495613_0008074 3300046689 Bacteria 7823
175 Ga0495624_0060784 3300046690 Bacteria 2368
176 Ga0495600_0016963 3300046809 Bacteria 4629
177 Ga0495604_0001529 3300047317 Bacteria 19050
178 Ga0495636_0000224 3300047318 Bacteria 22445
179 Ga0495636_0008847 3300047318 Bacteria 3966
180 Ga0495674_0047971 3300047319 Bacteria 3783
181 Ga0495675_0094879 3300047444 Bacteria 1870
182 Ga0496104_0005321 3300048907 Bacteria 11261
183 Ga0496113_0052965 3300048916 Bacteria 3033
184 Ga0496121_0055955 3300048924 Bacteria 3281
185 Ga0496123_0000666 3300048926 Bacteria 56742
186 Ga0496126_0026366 3300048929 Bacteria 5574
187 Ga0501032_0020111 3300049569 Bacteria 4654
188 Ga0501036_0072077 3300049572 Bacteria 2920
189 Ga0501036_0196873 3300049572 Bacteria 1695
190 Ga0501038_0017063 3300049574 Bacteria 6567
191 Ga0501038_0060233 3300049574 Bacteria 3249
192 Ga0501038_0154687 3300049574 Bacteria 1868
193 Ga0501039_0115019 3300049575 Bacteria 2105
194 Ga0501040_0048770 3300049576 Bacteria 2894
195 Ga0501040_0130064 3300049576 Bacteria 1770
196 Ga0501043_0107684 3300049579 Bacteria 2189
197 Ga0501046_0006321 3300049580 Bacteria 10504
198 Ga0501046_0139802 3300049580 Bacteria 1833
199 Ga0501047_0333994 3300049581 Bacteria 1354
200 Ga0501048_0016435 3300049582 Bacteria 5454
201 Ga0501048_0172136 3300049582 Bacteria 1534
202 Ga0501069_0000326 3300049585 Bacteria 21478
203 Ga0501070_0016740 3300049586 Bacteria 6156
204 Ga0501071_0001453 3300049587 Bacteria 13722
205 Ga0501071_0065651 3300049587 Bacteria 2635
206 Ga0501071_0111197 3300049587 Bacteria 2025
207 Ga0501072_0018739 3300049588 Bacteria 5336
208 Ga0501075_0004279 3300049591 Bacteria 9648
209 Ga0501075_0159197 3300049591 Bacteria 1722
210 Ga0501076_0015762 3300049592 Bacteria 5716
211 Ga0501076_0022398 3300049592 Bacteria 4857
212 Ga0501079_0005605 3300049741 Bacteria 9370
213 Ga0501079_0007675 3300049741 Bacteria 8165
214 Ga0501080_0000881 3300049742 Bacteria 24572
215 Ga0501080_0073170 3300049742 Bacteria 3188
216 Ga0501081_0003663 3300049743 Bacteria 9834
217 Ga0501035_0003222 3300049822 Bacteria 15634
218 nmdc:mga05p37_17045_c1 3300050507 Bacteria 8761
219 nmdc:mga05p37_29259_c1 3300050507 Bacteria 6724
220 nmdc:mga05p37_400996_c1 3300050507 Bacteria 1601
221 nmdc:mga05p37_58803_c1 3300050507 Bacteria 4734
222 nmdc:mga05p37_61961_c1 3300050507 Bacteria 4604
223 nmdc:mga0qj67_626_c1 3300050509 Bacteria 24241
224 nmdc:mga06r32_150325_c1 3300050510 Bacteria 2307
225 nmdc:mga08y16_222005_c1 3300050511 Bacteria 1956
226 nmdc:mga08y16_25217_c1 3300050511 Bacteria 6269
227 nmdc:mga08y16_7903_c1 3300050511 Bacteria 11131
228 nmdc:mga0n895_19171_c1 3300050512 Bacteria 6352
229 nmdc:mga0n895_75639_c1 3300050512 Bacteria 3347
230 nmdc:mga08x19_15576_c1 3300050514 Bacteria 4626
231 nmdc:mga08x19_487_c1 3300050514 Bacteria 26435
232 nmdc:mga0a205_29216_c1 3300050515 Bacteria 5276
233 nmdc:mga0a205_65131_c1 3300050515 Bacteria 3520
234 Ga0495601_0010553 3300053077 Bacteria 5501
235 Ga0501084_0020038 3300054114 Bacteria 5576
236 Ga0501082_0008740 3300060353 Bacteria 8730
237 Ga0501082_0163364 3300060353 Bacteria 1935
238 Ga0530510_0001009 3300061734 Bacteria 18700
239 Ga0530510_0114473 3300061734 Bacteria 1977
240 2574430429 2574179768 Bacteria 4907129
241 2595450590 2593339239 Bacteria 4124669
242 2643977497 2643221593 Bacteria 6296053
243 2895499715 2895498888 Bacteria 5283788
244 2895512739 2895511927 Bacteria 6802080
245 2895522753 2895522137 Bacteria 3284416
246 2895525485 2895525241 Bacteria 3388457
247 2987606560 2987605356 Bacteria 4187822
248 639788051 639633007 Bacteria 4376040
249 8002869967 8002869464 Bacteria 3588529
250 Ga0316575_10044355
251 JGI24736J21556_1002016
252 Ga0055526_1000183
253 Ga0055537_1000314
254 Ga0055524_1000461
255 Ga0055534_1000302
256 Ga0055528_1000172
257 Ga0065712_10092459
258 Ga0070658_10001451
259 Ga0070658_10002163
260 Ga0070658_10122412
261 Ga0070658_10130149
262 Ga0070683_100047927
263 Ga0070670_100022098
264 Ga0070670_100047809
265 Ga0070670_100113357
266 Ga0070666_10000001
267 Ga0070680_100084577
268 Ga0068868_100034357
269 Ga0068868_100104296
270 Ga0070661_100050895
271 Ga0070661_100068874
272 Ga0070668_100008699
273 Ga0070669_100019060
274 Ga0070669_100026313
275 Ga0070675_100001090
276 Ga0070667_100006964
277 Ga0070667_100024396
278 Ga0070713_100000026
279 Ga0070705_100054640
280 Ga0070694_100078165
281 Ga0070663_100197597
282 Ga0070672_100003340
283 Ga0070665_100000500
284 Ga0070665_100064722
285 Ga0068854_100021922
286 Ga0068856_100280167
287 Ga0070702_100091494
288 Ga0068852_100001416
289 Ga0068859_100069907
290 Ga0068859_100126498
291 Ga0068864_100195923
292 Ga0068864_100226825
293 Ga0068851_10000579
294 Ga0068863_100066337
295 Ga0068858_100008521
296 Ga0068858_100050246
297 Ga0068860_100031155
298 Ga0097621_100200177
299 Ga0068871_100014488
300 Ga0075428_100141095
301 Ga0075428_100347598
302 Ga0075430_100000168
303 Ga0075431_100100653
304 Ga0075434_100023710
305 Ga0075436_100000087
306 Ga0075436_100023836
307 Ga0075436_100122846
308 Ga0097620_100069906
309 Ga0097620_100126508
310 Ga0105240_10003669
311 Ga0105240_10091572
312 Ga0105240_10108343
313 Ga0105240_10293025
314 Ga0111539_10001041
315 Ga0111539_10011775
316 Ga0105245_10009332
317 Ga0114129_10059465
318 Ga0114129_10126481
319 Ga0105243_10011438
320 Ga0105241_10007309
321 Ga0105242_10028686
322 Ga0105237_10054017
323 Ga0105237_10123104
324 Ga0105238_10000729
325 Ga0105238_10277365
326 Ga0105249_10021158
327 Ga0105239_10047440
328 Ga0157374_10164150
329 Ga0163162_10002846
330 Ga0157375_10034169
331 Ga0163163_10007811
332 Ga0163163_10033419
333 Ga0157380_10181899
334 Ga0157376_10033570
335 Ga0163161_10024406
336 Ga0209565_1000002
337 Ga0209673_1000002
338 Ga0209675_1000002
339 Ga0209564_1000004
340 Ga0209758_1019238
341 Ga0209256_1000004
342 Ga0209256_1002878
343 Ga0209256_1008184
344 Ga0207680_10000003
345 Ga0207680_10043101
346 Ga0207647_10000134
347 Ga0207645_10030332
348 Ga0207643_10087229
349 Ga0207705_10001085
350 Ga0207705_10020432
351 Ga0207695_10099546
352 Ga0207695_10117615
353 Ga0207660_10139947
354 Ga0207681_10170891
355 Ga0207694_10000336
356 Ga0207694_10001480
357 Ga0207650_10036732
358 Ga0207659_10000430
359 Ga0207659_10061797
360 Ga0207687_10008574
361 Ga0207700_10000093
362 Ga0207706_10000792
363 Ga0207706_10054329
364 Ga0207686_10008451
365 Ga0207709_10021187
366 Ga0207670_10067572
367 Ga0207704_10178238
368 Ga0207651_10069653
369 Ga0207712_10000168
370 Ga0207640_10019455
371 Ga0207658_10008520
372 Ga0207658_10011370
373 Ga0207658_10054203
374 Ga0207677_10160736
375 Ga0207703_10001738
376 Ga0207703_10119114
377 Ga0207639_10000218
378 Ga0207678_10224156
379 Ga0207702_10017327
380 Ga0207648_10058346
381 Ga0207648_10123377
382 Ga0207676_10177709
383 Ga0207683_10003106
384 Ga0207428_10004837
385 Ga0268266_10000007
386 Ga0268266_10000011
387 Ga0268265_10007970
388 Ga0268264_10283559
389 Ga0265331_10085333
390 Ga0265327_10004834
391 Ga0307414_10000355
392 Ga0307414_10003116
393 Ga0316574_0002002
394 Ga0373935_0036509
395 Ga0436365_0309204
396 Ga0436362_0248446
397 Ga0451793_0337057
398 Ga0451577_0024139
399 Ga0453684_0015392
400 Ga0451576_0000006
401 Ga0451576_0001787
402 Ga0451576_0002337
403 Ga0451576_0150817
404 Ga0495592_0000583
405 Ga0495638_0000236
406 Ga0495641_0029259
407 Ga0495653_0034717
408 Ga0495639_0032824
409 Ga0495662_0027536
410 Ga0495608_0035935
411 Ga0495618_0006204
412 Ga0495628_0038901
413 Ga0495630_0001001
414 Ga0495666_0008510
415 Ga0495640_0051382
416 Ga0495586_0016858
417 Ga0495587_0017973
418 Ga0495634_0024916
419 Ga0495635_0049895
420 Ga0495647_0020737
421 Ga0495658_0002442
422 Ga0495669_0059854
423 Ga0495613_0008074
424 Ga0495624_0060784
425 Ga0495600_0016963
426 Ga0495604_0001529
427 Ga0495636_0000224
428 Ga0495636_0008847
429 Ga0495674_0047971
430 Ga0495675_0094879
431 Ga0496104_0005321
432 Ga0496113_0052965
433 Ga0496121_0055955
434 Ga0496123_0000666
435 Ga0496126_0026366
436 Ga0501032_0020111
437 Ga0501036_0072077
438 Ga0501036_0196873
439 Ga0501038_0017063
440 Ga0501038_0060233
441 Ga0501038_0154687
442 Ga0501039_0115019
443 Ga0501040_0048770
444 Ga0501040_0130064
445 Ga0501043_0107684
446 Ga0501046_0006321
447 Ga0501046_0139802
448 Ga0501047_0333994
449 Ga0501048_0016435
450 Ga0501048_0172136
451 Ga0501069_0000326
452 Ga0501070_0016740
453 Ga0501071_0001453
454 Ga0501071_0065651
455 Ga0501071_0111197
456 Ga0501072_0018739
457 Ga0501075_0004279
458 Ga0501075_0159197
459 Ga0501076_0015762
460 Ga0501076_0022398
461 Ga0501079_0005605
462 Ga0501079_0007675
463 Ga0501080_0000881
464 Ga0501080_0073170
465 Ga0501081_0003663
466 Ga0501035_0003222
467 nmdc:mga05p37_17045_c1
468 nmdc:mga05p37_29259_c1
469 nmdc:mga05p37_400996_c1
470 nmdc:mga05p37_58803_c1
471 nmdc:mga05p37_61961_c1
472 nmdc:mga0qj67_626_c1
473 nmdc:mga06r32_150325_c1
474 nmdc:mga08y16_222005_c1
475 nmdc:mga08y16_25217_c1
476 nmdc:mga08y16_7903_c1
477 nmdc:mga0n895_19171_c1
478 nmdc:mga0n895_75639_c1
479 nmdc:mga08x19_15576_c1
480 nmdc:mga08x19_487_c1
481 nmdc:mga0a205_29216_c1
482 nmdc:mga0a205_65131_c1
483 Ga0495601_0010553
484 Ga0501084_0020038
485 Ga0501082_0008740
486 Ga0501082_0163364
487 Ga0530510_0001009
488 Ga0530510_0114473
489 2574430429
490 2595450590
491 2643977497
492 2895499715
493 2895512739
494 2895522753
495 2895525485
496 2987606560
497 639788051
498 8002869967

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01071

GARS_A

Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain

119

312

0.99

PF02844

GARS_N

Phosphoribosylglycinamide synthetase, N domain

19

118

0.98

PF02843

GARS_C

Phosphoribosylglycinamide synthetase, C domain

347

436

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lp8-assembly1.cif.gz_A crystal structure of phosphoribosylamine-glycine ligase from ehrlichia chaffeensis 0.967 1 417
2xd4-assembly1.cif.gz_A nucleotide-bound structures of bacillus subtilis glycinamide ribonucleotide synthetase 0.9661 1 427
2xd4-assembly1.cif.gz_A nucleotide-bound structures of bacillus subtilis glycinamide ribonucleotide synthetase 0.9639 1 427
2yw2-assembly1.cif.gz_A crystal structure of gar synthetase from aquifex aeolicus in complex with atp 0.961 1 424
2qk4-assembly1.cif.gz_A human glycinamide ribonucleotide synthetase 0.9565 2 424
ID Description Score Start End Superfamily
5vevA02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9771 121 190 3.30.1490.20
af_C0PFX3_419_522_3.90.600.10 Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain 0.9669 333 426 3.90.600.10
af_P9WHM9_327_413_3.90.600.10 Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain 0.964 331 419 3.90.600.10
af_P00967_4_100_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9608 3 95 3.40.50.20
3lp8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9607 3 95 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A447RBA5-F1-model_v4 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.999 1 114 GO:0004637
GO:0009113
AF-A0A377YWJ3-F1-model_v4 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.9966 1 72 GO:0004637
GO:0009113
AF-A0A2N5A2F1-F1-model_v4 phosphoribosylamine--glycine ligase (EC 6.3.4.13) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) 0.9921 207 349 GO:0004637
GO:0005524
GO:0006189
GO:0009113
GO:0046872
AF-A0A3D1B3E3-F1-model_v4 Phosphoribosylamine--glycine ligase 0.9912 1 355 GO:0004637
GO:0005524
GO:0009113
GO:0046872
AF-A0A1C2G3P1-F1-model_v4 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Phosphoribosylglycinamide synthetase) (glycinamide ribonucleotide synthetase) 0.9909 1 419 GO:0004637
GO:0005524
GO:0006189
GO:0009113
GO:0046872

Map