F360959
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 249 | 159 | 498 | 926 |
Family's Representative Sequence
| Representative Sequence | 3300044712|Ga0453684_0060842|Ga0453684_0060842_857_3697 |
| Length | 946 |
| Sequence | MTTTMDKFSFLSNSDPSSIEQLYRQYLADPGSVDPSWQDFFKGFDFARTNFAETAEKPEVLDKEFRVLNLIDDYRKRGHFFTKTNPVRTRRSYTPTLDLENYGLADSDLDSLFHAGKSIGIGLASLRDIQAHLMQTYCRSVGAEFMYIRDVAKTNWLLAYMESTRNTPDYKPDEKKGIYHHLKTAVGFEKFIHKKFVGQKRFSLEGAETLIPALHSAIQRGVELGIEDFVIGMAHRGRLNVLANVMKKPNEDIFREFTANAYEGSISLGDVKYHLGYDNIIAVGDQKKAKLKLAPNPSHLETVSPIIQGISRALIEHEYEQNYNRVCPVLIHGDAAVAAQGVVYEVIQMMDLEGYKTGGTIHLVINNQVGFTTNYLEARSSTYCTDVGKTTKSPVFHVNGDDAEAVVFTLRMAMEYRQQFHSDVFIDILCYRKYGHNEGDEPRFTQPTLYKAIAAHSNPRDIYAAKLVDEKVFSPEDISKLEESYDNYLEEKLELARQDRKIHIKQFLGDRWSSYQYSSSEDFLQSPFTGVKKKDLLRIADRINHLPGEMSFFNKTIKLVEERKKLISEGKVDWAMGELLAYGTLVDSGFPVRLSGQDSVRGTFSHRHAGHTIEDTDMRYFPLQHVSAKQASFTGLNSLLSEYGVLGFEYGYSLTAPQGLTIWEAQFGDFHNVAQVIIDQYISSAEEKWGLMNGIVLFLPHGYEGQGPEHSSARIERFLVLAANNNMQLVNCTTPANLFHLLRRQVTRNFRTPLVVFTPKSLLRHPRVVSSIESLVDGRFQEVIDDENVDVEEVKRVVFCSGKIYYDLLAKKEEYNARDIALVRIEQLHPFPKEQIDDIIARYSKALVHLWVQEEPENMGPWTYMNYRFRDIPIIHITRQASGSPAVGLHEIHHLEQDEIVYKVFRHCDCDLKHKYCGLQCLVGKSRREILKQFNYIFMDRTINLK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 2 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 3 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 4 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 5 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 6 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 7 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 8 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 9 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 10 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 11 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 12 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 13 | 3300004799 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 14 | 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 15 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 16 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 17 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 22 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 23 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 25 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 26 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 27 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 28 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 29 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 31 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 32 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 49 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 50 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 51 | 3300015682 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 | Metagenome | Rhizosphere |
| 52 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 54 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 58 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 81 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 82 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 83 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 84 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 85 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 86 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 87 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 88 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 89 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 90 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 91 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 92 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 93 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 94 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 95 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 96 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 97 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 98 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 99 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 100 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 103 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 104 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 105 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 121 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 122 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 123 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 126 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 127 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 128 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 129 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 130 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 131 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 132 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 133 | 2738541283 | Pedobacter sp. OK701 | Isolate | Unclassified |
| 134 | 2738541284 | Pedobacter sp. YR016 | Isolate | Unclassified |
| 135 | 2738541302 | Pedobacter sp. CF074 | Isolate | Unclassified |
| 136 | 2738543023 | Pedobacter sp. OK628 | Isolate | Unclassified |
| 137 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 138 | 2739367656 | Pedobacter sp. CF523 | Isolate | Unclassified |
| 139 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 140 | 2775506987 | Pedobacter ginsengisoli T01R-27 | Isolate | Unclassified |
| 141 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 142 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 143 | 2842909656 | Pedobacter sp. R-72393 | Isolate | Unclassified |
| 144 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 145 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 146 | 2852627209 | Pedobacter sp. AK017 | Isolate | Rhizosphere |
| 147 | 2857627736 | Pedobacter sp. R-74587 | Isolate | Unclassified |
| 148 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 149 | 2902048731 | Pedobacter ureilyticus THG-T11 | Isolate | Rhizosphere |
| 150 | 2904445276 | Pedobacter terrae 1734 | Isolate | Rhizosphere |
| 151 | 2919186247 | Pedobacter africanus 2697 | Isolate | Rhizosphere |
| 152 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 153 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 154 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 155 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 156 | 2939664404 | Pedobacter africanus 2990 | Isolate | Rhizosphere |
| 157 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 158 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 159 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 87.15 |
| Metatranscriptomes | 1.2 |
| Isolates | 11.65 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.44 |
| Nodule | 0 |
| Rhizoplane | 0.4 |
| Rhizosphere | 77.51 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0453684_0060842 | 3300044712 | Bacteria | 4852 |
| 2 | JGI24737J22298_10000580 | 3300001990 | Bacteria | 12843 |
| 3 | JGI24735J21928_10000015 | 3300002067 | Bacteria | 167231 |
| 4 | JGI25162J39368_1000039 | 3300002737 | Bacteria | 175976 |
| 5 | JGI25162J39368_1000887 | 3300002737 | Bacteria | 19548 |
| 6 | JGI25150J39212_1000003 | 3300002774 | Bacteria | 508651 |
| 7 | JGI25151J46595_10000002 | 3300003187 | Bacteria | 731381 |
| 8 | JGI25165J46597_1001086 | 3300003214 | Bacteria | 17365 |
| 9 | JGI25153J46596_10000030 | 3300003215 | Bacteria | 200879 |
| 10 | rootH2_10040443 | 3300003320 | Bacteria | 19021 |
| 11 | rootH2_10170181 | 3300003320 | Bacteria | 2891 |
| 12 | rootH1_10001800 | 3300003323 | Bacteria | 72551 |
| 13 | rootH1_10018580 | 3300003323 | Bacteria | 4302 |
| 14 | Ga0055536_1000137 | 3300003781 | Bacteria | 62695 |
| 15 | Ga0055530_10001074 | 3300003791 | Bacteria | 21509 |
| 16 | Ga0058863_11493122 | 3300004799 | Bacteria | 5245 |
| 17 | Ga0058862_12737394 | 3300004803 | Bacteria | 5226 |
| 18 | Ga0065714_10006645 | 3300005288 | Bacteria | 4141 |
| 19 | Ga0065714_10007231 | 3300005288 | Bacteria | 5293 |
| 20 | Ga0065714_10065445 | 3300005288 | Bacteria | 10047 |
| 21 | Ga0065704_10000276 | 3300005289 | Bacteria | 41922 |
| 22 | Ga0065704_10005310 | 3300005289 | Bacteria | 5142 |
| 23 | Ga0070658_10000027 | 3300005327 | Bacteria | 164254 |
| 24 | Ga0070676_10000794 | 3300005328 | Bacteria | 15592 |
| 25 | Ga0070673_100008643 | 3300005364 | Bacteria | 6787 |
| 26 | Ga0070662_100000281 | 3300005457 | Bacteria | 30079 |
| 27 | Ga0068867_100009834 | 3300005459 | Bacteria | 6740 |
| 28 | Ga0070679_100009532 | 3300005530 | Bacteria | 9186 |
| 29 | Ga0070665_100000178 | 3300005548 | Bacteria | 113002 |
| 30 | Ga0068855_100000021 | 3300005563 | Bacteria | 195708 |
| 31 | Ga0068855_100000149 | 3300005563 | Bacteria | 89273 |
| 32 | Ga0068855_100015097 | 3300005563 | Bacteria | 9300 |
| 33 | Ga0068855_100048262 | 3300005563 | Bacteria | 5026 |
| 34 | Ga0068855_100056104 | 3300005563 | Bacteria | 4624 |
| 35 | Ga0068854_100015635 | 3300005578 | Bacteria | 5035 |
| 36 | Ga0068856_100000095 | 3300005614 | Bacteria | 84075 |
| 37 | Ga0068856_100018261 | 3300005614 | Bacteria | 6799 |
| 38 | Ga0068852_100000732 | 3300005616 | Bacteria | 21522 |
| 39 | Ga0075366_10000316 | 3300006195 | Bacteria | 21955 |
| 40 | Ga0097621_100000917 | 3300006237 | Bacteria | 20622 |
| 41 | Ga0068871_100001037 | 3300006358 | Bacteria | 18605 |
| 42 | Ga0068865_100000129 | 3300006881 | Bacteria | 39057 |
| 43 | Ga0105240_10003959 | 3300009093 | Bacteria | 22879 |
| 44 | Ga0105240_10004547 | 3300009093 | Bacteria | 21059 |
| 45 | Ga0105241_10004762 | 3300009174 | Bacteria | 9995 |
| 46 | Ga0105242_10034801 | 3300009176 | Bacteria | 4038 |
| 47 | Ga0105237_10000109 | 3300009545 | Bacteria | 115699 |
| 48 | Ga0105237_10000399 | 3300009545 | Bacteria | 61795 |
| 49 | Ga0105237_10016353 | 3300009545 | Bacteria | 7712 |
| 50 | Ga0105238_10002422 | 3300009551 | Bacteria | 18713 |
| 51 | Ga0105239_10000015 | 3300010375 | Bacteria | 319892 |
| 52 | Ga0157373_10000120 | 3300013100 | Bacteria | 60625 |
| 53 | Ga0157373_10000532 | 3300013100 | Bacteria | 29743 |
| 54 | Ga0157373_10005300 | 3300013100 | Bacteria | 9681 |
| 55 | Ga0157373_10022901 | 3300013100 | Bacteria | 4531 |
| 56 | Ga0157371_10000143 | 3300013102 | Bacteria | 103796 |
| 57 | Ga0157371_10000229 | 3300013102 | Bacteria | 81458 |
| 58 | Ga0157371_10018204 | 3300013102 | Bacteria | 5198 |
| 59 | Ga0157371_10018213 | 3300013102 | Bacteria | 5196 |
| 60 | Ga0157371_10028799 | 3300013102 | Bacteria | 4020 |
| 61 | Ga0157370_10000125 | 3300013104 | Bacteria | 91078 |
| 62 | Ga0157370_10000639 | 3300013104 | Bacteria | 43756 |
| 63 | Ga0157370_10039139 | 3300013104 | Bacteria | 4582 |
| 64 | Ga0157370_10056328 | 3300013104 | Bacteria | 3741 |
| 65 | Ga0157370_10073186 | 3300013104 | Bacteria | 3233 |
| 66 | Ga0157369_10005961 | 3300013105 | Bacteria | 14153 |
| 67 | Ga0157374_10002993 | 3300013296 | Bacteria | 14140 |
| 68 | Ga0157374_10003907 | 3300013296 | Bacteria | 12519 |
| 69 | Ga0157378_10017140 | 3300013297 | Bacteria | 6350 |
| 70 | Ga0163162_10000008 | 3300013306 | Bacteria | 316194 |
| 71 | Ga0163162_10000036 | 3300013306 | Bacteria | 144093 |
| 72 | Ga0163162_10008415 | 3300013306 | Bacteria | 10060 |
| 73 | Ga0157372_10000030 | 3300013307 | Bacteria | 179925 |
| 74 | Ga0157372_10000051 | 3300013307 | Bacteria | 136437 |
| 75 | Ga0157375_10012620 | 3300013308 | Bacteria | 7498 |
| 76 | Ga0157375_10029913 | 3300013308 | Bacteria | 5128 |
| 77 | Ga0157380_10000033 | 3300014326 | Bacteria | 86616 |
| 78 | Ga0182008_10000021 | 3300014497 | Bacteria | 227140 |
| 79 | Ga0182008_10000124 | 3300014497 | Bacteria | 58644 |
| 80 | Ga0182008_10000306 | 3300014497 | Bacteria | 38394 |
| 81 | Ga0182006_1000064 | 3300015261 | Bacteria | 153418 |
| 82 | Ga0182006_1000089 | 3300015261 | Bacteria | 110375 |
| 83 | Ga0182006_1004151 | 3300015261 | Bacteria | 7188 |
| 84 | Ga0182006_1008314 | 3300015261 | Bacteria | 4706 |
| 85 | Ga0182007_10000038 | 3300015262 | Bacteria | 123202 |
| 86 | Ga0183373_1009 | 3300015682 | Bacteria | 210158 |
| 87 | Ga0163161_10000047 | 3300017792 | Bacteria | 126839 |
| 88 | Ga0163161_10000090 | 3300017792 | Bacteria | 90964 |
| 89 | Ga0163161_10000383 | 3300017792 | Bacteria | 37194 |
| 90 | Ga0163161_10000423 | 3300017792 | Bacteria | 35592 |
| 91 | Ga0206351_10464421 | 3300020077 | Bacteria | 3497 |
| 92 | Ga0207427_100225 | 3300025231 | Bacteria | 48238 |
| 93 | Ga0209437_100112 | 3300025233 | Bacteria | 214292 |
| 94 | Ga0209437_100135 | 3300025233 | Bacteria | 176455 |
| 95 | Ga0207425_1000003 | 3300025245 | Bacteria | 1145342 |
| 96 | Ga0209026_1001561 | 3300025250 | Bacteria | 9907 |
| 97 | Ga0209026_1003943 | 3300025250 | Bacteria | 4639 |
| 98 | Ga0209129_1000014 | 3300025258 | Bacteria | 509018 |
| 99 | Ga0209233_1000126 | 3300025261 | Bacteria | 214298 |
| 100 | Ga0209233_1000830 | 3300025261 | Bacteria | 13677 |
| 101 | Ga0209676_1000009 | 3300025292 | Bacteria | 981719 |
| 102 | Ga0209025_1000007 | 3300025294 | Bacteria | 1145109 |
| 103 | Ga0209758_1000012 | 3300025297 | Bacteria | 949866 |
| 104 | Ga0209050_1000190 | 3300025298 | Bacteria | 138532 |
| 105 | Ga0207647_10000518 | 3300025904 | Bacteria | 30784 |
| 106 | Ga0207647_10001675 | 3300025904 | Bacteria | 17061 |
| 107 | Ga0207645_10000099 | 3300025907 | Bacteria | 64087 |
| 108 | Ga0207705_10000053 | 3300025909 | Bacteria | 162124 |
| 109 | Ga0207654_10002379 | 3300025911 | Bacteria | 9630 |
| 110 | Ga0207654_10006352 | 3300025911 | Bacteria | 5942 |
| 111 | Ga0207654_10007396 | 3300025911 | Bacteria | 5530 |
| 112 | Ga0207695_10000142 | 3300025913 | Bacteria | 214715 |
| 113 | Ga0207695_10003765 | 3300025913 | Bacteria | 21051 |
| 114 | Ga0207695_10007954 | 3300025913 | Bacteria | 13375 |
| 115 | Ga0207671_10000110 | 3300025914 | Bacteria | 126480 |
| 116 | Ga0207671_10001371 | 3300025914 | Bacteria | 28336 |
| 117 | Ga0207671_10001451 | 3300025914 | Bacteria | 27374 |
| 118 | Ga0207671_10010847 | 3300025914 | Bacteria | 7475 |
| 119 | Ga0207694_10023847 | 3300025924 | Bacteria | 4646 |
| 120 | Ga0207644_10006152 | 3300025931 | Bacteria | 7827 |
| 121 | Ga0207706_10000138 | 3300025933 | Bacteria | 79643 |
| 122 | Ga0207704_10000015 | 3300025938 | Bacteria | 163572 |
| 123 | Ga0207667_10000014 | 3300025949 | Bacteria | 421261 |
| 124 | Ga0207667_10003564 | 3300025949 | Bacteria | 19241 |
| 125 | Ga0207667_10007795 | 3300025949 | Bacteria | 12798 |
| 126 | Ga0207667_10028100 | 3300025949 | Bacteria | 6111 |
| 127 | Ga0207651_10013131 | 3300025960 | Bacteria | 4725 |
| 128 | Ga0207639_10007709 | 3300026041 | Bacteria | 7349 |
| 129 | Ga0207702_10000699 | 3300026078 | Bacteria | 36199 |
| 130 | Ga0207648_10000888 | 3300026089 | Bacteria | 33713 |
| 131 | Ga0268266_10000098 | 3300028379 | Bacteria | 182784 |
| 132 | Ga0265323_10000843 | 3300028653 | Bacteria | 16343 |
| 133 | Ga0307515_10018306 | 3300028794 | Bacteria | 12693 |
| 134 | Ga0265338_10010934 | 3300028800 | Bacteria | 10551 |
| 135 | Ga0265327_10001922 | 3300031251 | Bacteria | 23983 |
| 136 | Ga0265316_10000407 | 3300031344 | Bacteria | 49199 |
| 137 | Ga0307405_10000022 | 3300031731 | Bacteria | 148522 |
| 138 | Ga0307407_10000012 | 3300031903 | Bacteria | 172479 |
| 139 | Ga0307412_10000111 | 3300031911 | Bacteria | 64380 |
| 140 | Ga0307416_100000024 | 3300032002 | Bacteria | 186924 |
| 141 | Ga0307414_10000545 | 3300032004 | Bacteria | 19649 |
| 142 | Ga0307414_10003645 | 3300032004 | Bacteria | 8249 |
| 143 | Ga0307414_10005812 | 3300032004 | Bacteria | 6820 |
| 144 | Ga0307411_10003548 | 3300032005 | Bacteria | 7262 |
| 145 | Ga0307507_10016061 | 3300033179 | Bacteria | 8749 |
| 146 | Ga0307510_10004763 | 3300033180 | Bacteria | 16053 |
| 147 | Ga0395899_0000394 | 3300037312 | Bacteria | 51861 |
| 148 | Ga0395899_0014496 | 3300037312 | Bacteria | 6017 |
| 149 | Ga0395900_0001838 | 3300037418 | Bacteria | 24186 |
| 150 | Ga0395900_0004493 | 3300037418 | Bacteria | 14767 |
| 151 | Ga0395900_0067177 | 3300037418 | Bacteria | 3683 |
| 152 | Ga0395905_0001634 | 3300037471 | Bacteria | 26593 |
| 153 | Ga0395901_0012586 | 3300038443 | Bacteria | 8586 |
| 154 | Ga0395901_0071397 | 3300038443 | Bacteria | 3618 |
| 155 | Ga0400483_010933 | 3300039062 | Bacteria | 56602 |
| 156 | Ga0400489_04523 | 3300039093 | Bacteria | 5907 |
| 157 | Ga0436361_1157842 | 3300039447 | Bacteria | 4961 |
| 158 | Ga0439448_0000282 | 3300042005 | Bacteria | 11126 |
| 159 | Ga0451577_0000015 | 3300042876 | Bacteria | 538333 |
| 160 | Ga0451577_0000180 | 3300042876 | Bacteria | 135209 |
| 161 | Ga0451577_0002768 | 3300042876 | Bacteria | 20293 |
| 162 | Ga0453683_0000061 | 3300044673 | Bacteria | 185470 |
| 163 | Ga0453683_0000180 | 3300044673 | Bacteria | 88083 |
| 164 | Ga0453683_0001740 | 3300044673 | Bacteria | 18050 |
| 165 | Ga0453684_0000081 | 3300044712 | Bacteria | 402985 |
| 166 | Ga0453684_0000587 | 3300044712 | Bacteria | 135209 |
| 167 | Ga0453684_0000648 | 3300044712 | Bacteria | 125276 |
| 168 | Ga0453684_0000932 | 3300044712 | Bacteria | 96735 |
| 169 | Ga0453684_0001093 | 3300044712 | Bacteria | 85531 |
| 170 | Ga0453684_0008320 | 3300044712 | Bacteria | 18666 |
| 171 | Ga0453684_0018383 | 3300044712 | Bacteria | 10729 |
| 172 | Ga0453684_0019332 | 3300044712 | Bacteria | 10377 |
| 173 | Ga0453684_0032615 | 3300044712 | Bacteria | 7284 |
| 174 | Ga0453684_0046381 | 3300044712 | Bacteria | 5780 |
| 175 | Ga0453684_0194069 | 3300044712 | Bacteria | 2373 |
| 176 | Ga0451576_0000235 | 3300045051 | Bacteria | 135209 |
| 177 | Ga0451576_0000339 | 3300045051 | Bacteria | 112422 |
| 178 | Ga0451576_0001619 | 3300045051 | Bacteria | 37784 |
| 179 | Ga0451576_0005956 | 3300045051 | Bacteria | 15098 |
| 180 | Ga0451576_0007567 | 3300045051 | Bacteria | 12946 |
| 181 | Ga0451576_0015179 | 3300045051 | Bacteria | 8546 |
| 182 | Ga0451576_0037003 | 3300045051 | Bacteria | 5171 |
| 183 | Ga0451576_0050606 | 3300045051 | Bacteria | 4357 |
| 184 | Ga0451576_0057863 | 3300045051 | Bacteria | 4052 |
| 185 | Ga0466958_0020917 | 3300045836 | Bacteria | 3819 |
| 186 | Ga0495650_0000144 | 3300046471 | Bacteria | 165957 |
| 187 | Ga0495585_0000348 | 3300046492 | Bacteria | 44925 |
| 188 | Ga0495606_0000430 | 3300046507 | Bacteria | 69872 |
| 189 | Ga0495606_0018553 | 3300046507 | Bacteria | 5211 |
| 190 | Ga0495610_0000130 | 3300046512 | Bacteria | 82710 |
| 191 | Ga0495610_0000215 | 3300046512 | Bacteria | 62664 |
| 192 | Ga0495610_0001817 | 3300046512 | Bacteria | 18559 |
| 193 | Ga0495616_0000915 | 3300046513 | Bacteria | 21238 |
| 194 | Ga0495648_0004232 | 3300046524 | Bacteria | 12314 |
| 195 | Ga0495609_0001730 | 3300046538 | Bacteria | 14096 |
| 196 | Ga0495633_0000596 | 3300046558 | Bacteria | 34875 |
| 197 | Ga0495633_0001260 | 3300046558 | Bacteria | 20176 |
| 198 | Ga0495668_0000075 | 3300046616 | Bacteria | 163092 |
| 199 | Ga0495625_0000059 | 3300046660 | Bacteria | 180330 |
| 200 | Ga0495625_0001162 | 3300046660 | Bacteria | 33895 |
| 201 | Ga0495661_0000134 | 3300046665 | Bacteria | 87487 |
| 202 | Ga0495661_0014054 | 3300046665 | Bacteria | 5366 |
| 203 | Ga0495649_0000031 | 3300046694 | Bacteria | 151547 |
| 204 | Ga0495660_0004037 | 3300046810 | Bacteria | 8959 |
| 205 | Ga0495687_000233 | 3300047443 | Bacteria | 77056 |
| 206 | Ga0495687_000783 | 3300047443 | Bacteria | 34231 |
| 207 | Ga0495686_0000419 | 3300047472 | Bacteria | 66923 |
| 208 | Ga0495686_0001285 | 3300047472 | Bacteria | 28340 |
| 209 | Ga0495686_0021035 | 3300047472 | Bacteria | 4342 |
| 210 | Ga0496122_0000991 | 3300048925 | Bacteria | 50603 |
| 211 | Ga0496123_0008955 | 3300048926 | Bacteria | 9099 |
| 212 | Ga0496125_0031260 | 3300048928 | Bacteria | 4747 |
| 213 | Ga0501047_0098613 | 3300049581 | Bacteria | 2800 |
| 214 | Ga0501044_0026035 | 3300049823 | Bacteria | 6195 |
| 215 | nmdc:mga0k408_191_c1 | 3300050493 | Bacteria | 32128 |
| 216 | Ga0500651_0013164 | 3300053093 | Bacteria | 5031 |
| 217 | Ga0500608_002371 | 3300053122 | Bacteria | 6846 |
| 218 | Ga0500618_000005 | 3300053125 | Bacteria | 253092 |
| 219 | Ga0500622_0004845 | 3300053156 | Bacteria | 8257 |
| 220 | Ga0500624_000188 | 3300053157 | Bacteria | 24391 |
| 221 | 2586207598 | 2585427687 | Bacteria | 5544917 |
| 222 | 2599481681 | 2599185184 | Bacteria | 6430550 |
| 223 | 2738758393 | 2738541283 | Bacteria | 7222293 |
| 224 | 2738764022 | 2738541284 | Bacteria | 5199923 |
| 225 | 2738856383 | 2738541302 | Bacteria | 5944758 |
| 226 | 2739302783 | 2738543023 | Bacteria | 6767879 |
| 227 | 2739587811 | 2739367651 | Bacteria | 6359826 |
| 228 | 2739614501 | 2739367656 | Bacteria | 5152243 |
| 229 | 2739646528 | 2739367663 | Bacteria | 5040914 |
| 230 | 2776616384 | 2775506987 | Bacteria | 5373360 |
| 231 | 2819545711 | 2818991437 | Bacteria | 5805520 |
| 232 | 2842724400 | 2842722452 | Bacteria | 6263924 |
| 233 | 2842912106 | 2842909656 | Bacteria | 6185908 |
| 234 | 2849284909 | 2849281842 | Bacteria | 6065644 |
| 235 | 2852624919 | 2852623160 | Bacteria | 4376875 |
| 236 | 2852629579 | 2852627209 | Bacteria | 5896285 |
| 237 | 2857629868 | 2857627736 | Bacteria | 5625397 |
| 238 | 2884936185 | 2884933994 | Bacteria | 4535041 |
| 239 | 2902050304 | 2902048731 | Bacteria | 4976191 |
| 240 | 2904448394 | 2904445276 | Bacteria | 5310396 |
| 241 | 2919191142 | 2919186247 | Bacteria | 6244071 |
| 242 | 2919437944 | 2919437846 | Bacteria | 6199444 |
| 243 | 2928082166 | 2928078545 | Bacteria | 6534839 |
| 244 | 2928149258 | 2928147474 | Bacteria | 6512076 |
| 245 | 2932087683 | 2932082852 | Bacteria | 6563563 |
| 246 | 2939669421 | 2939664404 | Bacteria | 6364494 |
| 247 | 2945998763 | 2945997725 | Bacteria | 6404843 |
| 248 | 2954021211 | 2954016120 | Bacteria | 6446024 |
| 249 | 2977235768 | 2977232053 | Bacteria | 5485925 |
| 250 | Ga0453684_0060842 | |||
| 251 | JGI24737J22298_10000580 | |||
| 252 | JGI24735J21928_10000015 | |||
| 253 | JGI25162J39368_1000039 | |||
| 254 | JGI25162J39368_1000887 | |||
| 255 | JGI25150J39212_1000003 | |||
| 256 | JGI25151J46595_10000002 | |||
| 257 | JGI25165J46597_1001086 | |||
| 258 | JGI25153J46596_10000030 | |||
| 259 | rootH2_10040443 | |||
| 260 | rootH2_10170181 | |||
| 261 | rootH1_10001800 | |||
| 262 | rootH1_10018580 | |||
| 263 | Ga0055536_1000137 | |||
| 264 | Ga0055530_10001074 | |||
| 265 | Ga0058863_11493122 | |||
| 266 | Ga0058862_12737394 | |||
| 267 | Ga0065714_10006645 | |||
| 268 | Ga0065714_10007231 | |||
| 269 | Ga0065714_10065445 | |||
| 270 | Ga0065704_10000276 | |||
| 271 | Ga0065704_10005310 | |||
| 272 | Ga0070658_10000027 | |||
| 273 | Ga0070676_10000794 | |||
| 274 | Ga0070673_100008643 | |||
| 275 | Ga0070662_100000281 | |||
| 276 | Ga0068867_100009834 | |||
| 277 | Ga0070679_100009532 | |||
| 278 | Ga0070665_100000178 | |||
| 279 | Ga0068855_100000021 | |||
| 280 | Ga0068855_100000149 | |||
| 281 | Ga0068855_100015097 | |||
| 282 | Ga0068855_100048262 | |||
| 283 | Ga0068855_100056104 | |||
| 284 | Ga0068854_100015635 | |||
| 285 | Ga0068856_100000095 | |||
| 286 | Ga0068856_100018261 | |||
| 287 | Ga0068852_100000732 | |||
| 288 | Ga0075366_10000316 | |||
| 289 | Ga0097621_100000917 | |||
| 290 | Ga0068871_100001037 | |||
| 291 | Ga0068865_100000129 | |||
| 292 | Ga0105240_10003959 | |||
| 293 | Ga0105240_10004547 | |||
| 294 | Ga0105241_10004762 | |||
| 295 | Ga0105242_10034801 | |||
| 296 | Ga0105237_10000109 | |||
| 297 | Ga0105237_10000399 | |||
| 298 | Ga0105237_10016353 | |||
| 299 | Ga0105238_10002422 | |||
| 300 | Ga0105239_10000015 | |||
| 301 | Ga0157373_10000120 | |||
| 302 | Ga0157373_10000532 | |||
| 303 | Ga0157373_10005300 | |||
| 304 | Ga0157373_10022901 | |||
| 305 | Ga0157371_10000143 | |||
| 306 | Ga0157371_10000229 | |||
| 307 | Ga0157371_10018204 | |||
| 308 | Ga0157371_10018213 | |||
| 309 | Ga0157371_10028799 | |||
| 310 | Ga0157370_10000125 | |||
| 311 | Ga0157370_10000639 | |||
| 312 | Ga0157370_10039139 | |||
| 313 | Ga0157370_10056328 | |||
| 314 | Ga0157370_10073186 | |||
| 315 | Ga0157369_10005961 | |||
| 316 | Ga0157374_10002993 | |||
| 317 | Ga0157374_10003907 | |||
| 318 | Ga0157378_10017140 | |||
| 319 | Ga0163162_10000008 | |||
| 320 | Ga0163162_10000036 | |||
| 321 | Ga0163162_10008415 | |||
| 322 | Ga0157372_10000030 | |||
| 323 | Ga0157372_10000051 | |||
| 324 | Ga0157375_10012620 | |||
| 325 | Ga0157375_10029913 | |||
| 326 | Ga0157380_10000033 | |||
| 327 | Ga0182008_10000021 | |||
| 328 | Ga0182008_10000124 | |||
| 329 | Ga0182008_10000306 | |||
| 330 | Ga0182006_1000064 | |||
| 331 | Ga0182006_1000089 | |||
| 332 | Ga0182006_1004151 | |||
| 333 | Ga0182006_1008314 | |||
| 334 | Ga0182007_10000038 | |||
| 335 | Ga0183373_1009 | |||
| 336 | Ga0163161_10000047 | |||
| 337 | Ga0163161_10000090 | |||
| 338 | Ga0163161_10000383 | |||
| 339 | Ga0163161_10000423 | |||
| 340 | Ga0206351_10464421 | |||
| 341 | Ga0207427_100225 | |||
| 342 | Ga0209437_100112 | |||
| 343 | Ga0209437_100135 | |||
| 344 | Ga0207425_1000003 | |||
| 345 | Ga0209026_1001561 | |||
| 346 | Ga0209026_1003943 | |||
| 347 | Ga0209129_1000014 | |||
| 348 | Ga0209233_1000126 | |||
| 349 | Ga0209233_1000830 | |||
| 350 | Ga0209676_1000009 | |||
| 351 | Ga0209025_1000007 | |||
| 352 | Ga0209758_1000012 | |||
| 353 | Ga0209050_1000190 | |||
| 354 | Ga0207647_10000518 | |||
| 355 | Ga0207647_10001675 | |||
| 356 | Ga0207645_10000099 | |||
| 357 | Ga0207705_10000053 | |||
| 358 | Ga0207654_10002379 | |||
| 359 | Ga0207654_10006352 | |||
| 360 | Ga0207654_10007396 | |||
| 361 | Ga0207695_10000142 | |||
| 362 | Ga0207695_10003765 | |||
| 363 | Ga0207695_10007954 | |||
| 364 | Ga0207671_10000110 | |||
| 365 | Ga0207671_10001371 | |||
| 366 | Ga0207671_10001451 | |||
| 367 | Ga0207671_10010847 | |||
| 368 | Ga0207694_10023847 | |||
| 369 | Ga0207644_10006152 | |||
| 370 | Ga0207706_10000138 | |||
| 371 | Ga0207704_10000015 | |||
| 372 | Ga0207667_10000014 | |||
| 373 | Ga0207667_10003564 | |||
| 374 | Ga0207667_10007795 | |||
| 375 | Ga0207667_10028100 | |||
| 376 | Ga0207651_10013131 | |||
| 377 | Ga0207639_10007709 | |||
| 378 | Ga0207702_10000699 | |||
| 379 | Ga0207648_10000888 | |||
| 380 | Ga0268266_10000098 | |||
| 381 | Ga0265323_10000843 | |||
| 382 | Ga0307515_10018306 | |||
| 383 | Ga0265338_10010934 | |||
| 384 | Ga0265327_10001922 | |||
| 385 | Ga0265316_10000407 | |||
| 386 | Ga0307405_10000022 | |||
| 387 | Ga0307407_10000012 | |||
| 388 | Ga0307412_10000111 | |||
| 389 | Ga0307416_100000024 | |||
| 390 | Ga0307414_10000545 | |||
| 391 | Ga0307414_10003645 | |||
| 392 | Ga0307414_10005812 | |||
| 393 | Ga0307411_10003548 | |||
| 394 | Ga0307507_10016061 | |||
| 395 | Ga0307510_10004763 | |||
| 396 | Ga0395899_0000394 | |||
| 397 | Ga0395899_0014496 | |||
| 398 | Ga0395900_0001838 | |||
| 399 | Ga0395900_0004493 | |||
| 400 | Ga0395900_0067177 | |||
| 401 | Ga0395905_0001634 | |||
| 402 | Ga0395901_0012586 | |||
| 403 | Ga0395901_0071397 | |||
| 404 | Ga0400483_010933 | |||
| 405 | Ga0400489_04523 | |||
| 406 | Ga0436361_1157842 | |||
| 407 | Ga0439448_0000282 | |||
| 408 | Ga0451577_0000015 | |||
| 409 | Ga0451577_0000180 | |||
| 410 | Ga0451577_0002768 | |||
| 411 | Ga0453683_0000061 | |||
| 412 | Ga0453683_0000180 | |||
| 413 | Ga0453683_0001740 | |||
| 414 | Ga0453684_0000081 | |||
| 415 | Ga0453684_0000587 | |||
| 416 | Ga0453684_0000648 | |||
| 417 | Ga0453684_0000932 | |||
| 418 | Ga0453684_0001093 | |||
| 419 | Ga0453684_0008320 | |||
| 420 | Ga0453684_0018383 | |||
| 421 | Ga0453684_0019332 | |||
| 422 | Ga0453684_0032615 | |||
| 423 | Ga0453684_0046381 | |||
| 424 | Ga0453684_0194069 | |||
| 425 | Ga0451576_0000235 | |||
| 426 | Ga0451576_0000339 | |||
| 427 | Ga0451576_0001619 | |||
| 428 | Ga0451576_0005956 | |||
| 429 | Ga0451576_0007567 | |||
| 430 | Ga0451576_0015179 | |||
| 431 | Ga0451576_0037003 | |||
| 432 | Ga0451576_0050606 | |||
| 433 | Ga0451576_0057863 | |||
| 434 | Ga0466958_0020917 | |||
| 435 | Ga0495650_0000144 | |||
| 436 | Ga0495585_0000348 | |||
| 437 | Ga0495606_0000430 | |||
| 438 | Ga0495606_0018553 | |||
| 439 | Ga0495610_0000130 | |||
| 440 | Ga0495610_0000215 | |||
| 441 | Ga0495610_0001817 | |||
| 442 | Ga0495616_0000915 | |||
| 443 | Ga0495648_0004232 | |||
| 444 | Ga0495609_0001730 | |||
| 445 | Ga0495633_0000596 | |||
| 446 | Ga0495633_0001260 | |||
| 447 | Ga0495668_0000075 | |||
| 448 | Ga0495625_0000059 | |||
| 449 | Ga0495625_0001162 | |||
| 450 | Ga0495661_0000134 | |||
| 451 | Ga0495661_0014054 | |||
| 452 | Ga0495649_0000031 | |||
| 453 | Ga0495660_0004037 | |||
| 454 | Ga0495687_000233 | |||
| 455 | Ga0495687_000783 | |||
| 456 | Ga0495686_0000419 | |||
| 457 | Ga0495686_0001285 | |||
| 458 | Ga0495686_0021035 | |||
| 459 | Ga0496122_0000991 | |||
| 460 | Ga0496123_0008955 | |||
| 461 | Ga0496125_0031260 | |||
| 462 | Ga0501047_0098613 | |||
| 463 | Ga0501044_0026035 | |||
| 464 | nmdc:mga0k408_191_c1 | |||
| 465 | Ga0500651_0013164 | |||
| 466 | Ga0500608_002371 | |||
| 467 | Ga0500618_000005 | |||
| 468 | Ga0500622_0004845 | |||
| 469 | Ga0500624_000188 | |||
| 470 | 2586207598 | |||
| 471 | 2599481681 | |||
| 472 | 2738758393 | |||
| 473 | 2738764022 | |||
| 474 | 2738856383 | |||
| 475 | 2739302783 | |||
| 476 | 2739587811 | |||
| 477 | 2739614501 | |||
| 478 | 2739646528 | |||
| 479 | 2776616384 | |||
| 480 | 2819545711 | |||
| 481 | 2842724400 | |||
| 482 | 2842912106 | |||
| 483 | 2849284909 | |||
| 484 | 2852624919 | |||
| 485 | 2852629579 | |||
| 486 | 2857629868 | |||
| 487 | 2884936185 | |||
| 488 | 2902050304 | |||
| 489 | 2904448394 | |||
| 490 | 2919191142 | |||
| 491 | 2919437944 | |||
| 492 | 2928082166 | |||
| 493 | 2928149258 | |||
| 494 | 2932087683 | |||
| 495 | 2939669421 | |||
| 496 | 2945998763 | |||
| 497 | 2954021211 | |||
| 498 | 2977235768 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5rw0-assembly1.cif.gz_B | pandda analysis group deposition -- crystal structure of dhtkd1 in complex with z2444997446 | 0.9302 | 69 | 913 |
| 6kma-assembly2.cif.gz_D | crystal structure of suca with glycolaldehyde-1-13c from vibrio vulnificus | 0.9286 | 67 | 912 |
| 6kma-assembly1.cif.gz_B | crystal structure of suca with glycolaldehyde-1-13c from vibrio vulnificus | 0.9273 | 67 | 912 |
| 6km9-assembly1.cif.gz_B | crystal structure of suca from vibrio vulnificus | 0.9273 | 67 | 912 |
| 6kma-assembly1.cif.gz_A | crystal structure of suca with glycolaldehyde-1-13c from vibrio vulnificus | 0.9271 | 67 | 912 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O74378_600_867_3.40.50.12470 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9433 | 535 | 783 | 3.40.50.12470 |
| af_A4I2P6_188_552_3.40.50.970 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.941 | 145 | 508 | 3.40.50.970 |
| af_Q8I6S5_217_586_3.40.50.970 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.9382 | 144 | 506 | 3.40.50.970 |
| af_Q95T35_235_600_3.40.50.970 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.9333 | 145 | 507 | 3.40.50.970 |
| af_Q54VG0_108_473_3.40.50.970 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.9324 | 145 | 508 | 3.40.50.970 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A699TNP0-F1-model_v4 | 2-oxoglutarate dehydrogenase, mitochondrial-like | 0.9624 | 684 | 859 |
GO:0004591
GO:0005829 GO:0006099 GO:0030976 GO:0045252 |
| AF-A0A2C6VJD2-F1-model_v4 | deleted | 0.9616 | 95 | 913 |
|
| AF-A0A2M7K4Q0-F1-model_v4 | oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) | 0.961 | 88 | 784 |
GO:0004591
GO:0005829 GO:0006099 GO:0030976 GO:0045252 |
| AF-A0A519XIT5-F1-model_v4 | oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) | 0.9606 | 549 | 893 |
GO:0004591
GO:0006099 GO:0030976 GO:0045252 |
| AF-A0A2M7K4Q0-F1-model_v4 | oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) | 0.9596 | 88 | 784 |
GO:0004591
GO:0005829 GO:0006099 GO:0030976 GO:0045252 |