F360963

General Info

Members Datasets Scaffolds Average Seq Length
249 166 498 455

Family's Representative Sequence

Representative Sequence 3300044765|Ga0466970_0000607|Ga0466970_0000607_9748_11259
Length 503
Sequence LPVKYSCCEHFPYSVNAAQALAAFAQKLARNLLGSANCGNFAVSNKPSLASYLPPALLETLAHNKGFDRAAFEAVHASGEQVTSVRYNPAKLSLLKGDEPFPSTTQVPWCPDGRYLPQRPSFTLDPLLHAGLYYVQEASSMFLWHMLQYTTNGRAGQRVLDLCAAPGGKTTLLSAYFTNSLLVSNEVIKPRSAVLVENMTKWGTGEAVVTSNDPKDFQPLAGYFDVIVVDAPCSGSGLFRRDPDAVQEWSPENVTLCSQRQQRILADIMPALKQGGVLIYSTCSYSAEEDEQIADWLMQSFELEHIPVPLPAQWQVVPTTSPLKGAEGYRFYPDKIRGEGLYICAFRRKDGSVFSNRKSQLPAAPKKETVLAREWIHPAAAPYFFMQKENLLAIPEIWQADIALLQRHLYLRKAGVNIGAIKGNDLVPSHELALSLLLEPGLQKAALGLDEALLYLRKKEFAPGTGGKGWALATYRDIPLGWMKLLPNRVNNYYPTEWRIIKD

Samples

Sample ID Description Type Environment
1 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
67 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
110 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
111 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
114 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
115 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
119 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
136 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
137 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
142 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
145 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
146 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
147 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
148 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
149 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
150 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
151 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
152 2738541278 Niastella sp. CF465 Isolate Unclassified
153 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
154 2818991444 Filimonas endophytica 3197 Isolate Unclassified
155 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
156 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
157 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
158 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
159 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
160 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
161 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
162 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
163 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
164 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
165 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
166 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.98
Metatranscriptomes 0
Isolates 6.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.23
Nodule 0
Rhizoplane 1.2
Rhizosphere 80.32
Stem 0
Stem Tuber 0
Unclassified 4.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466970_0000607 3300044765 Bacteria 17574
2 SwRhRL2b_contig_1790489 2162886007 Bacteria 77625
3 JGI25406J46586_10001143 3300003203 Bacteria 12460
4 rootH2_10013043 3300003320 Bacteria 11885
5 rootH2_10015349 3300003320 Bacteria 24566
6 rootH2_10172890 3300003320 Bacteria 7005
7 rootL2_10048871 3300003322 Bacteria 1744
8 rootH1_10002797 3300003323 Bacteria 12596
9 rootH1_10044844 3300003323 Bacteria 3113
10 JGI25160J50197_1001926 3300003354 Bacteria 9925
11 JGI25160J50197_1004705 3300003354 Bacteria 5845
12 Ga0065704_10070136 3300005289 Bacteria 560402
13 Ga0065704_10080603 3300005289 Bacteria 3916
14 Ga0065712_10003124 3300005290 Bacteria 4116
15 Ga0065712_10003179 3300005290 Bacteria 3904
16 Ga0065707_10128623 3300005295 Bacteria 1962
17 Ga0070658_10000290 3300005327 Bacteria 43973
18 Ga0070658_10024137 3300005327 Bacteria 4879
19 Ga0070683_100009554 3300005329 Bacteria 8302
20 Ga0070683_100023084 3300005329 Bacteria 5563
21 Ga0070670_100207058 3300005331 Bacteria 1705
22 Ga0068869_100034791 3300005334 Bacteria 3566
23 Ga0068869_100107352 3300005334 Bacteria 2120
24 Ga0070666_10025995 3300005335 Bacteria 3821
25 Ga0070666_10074517 3300005335 Bacteria 2313
26 Ga0070660_100003720 3300005339 Bacteria 10539
27 Ga0070689_100141820 3300005340 Bacteria 1933
28 Ga0070661_100011643 3300005344 Bacteria 6132
29 Ga0070675_100020772 3300005354 Bacteria 5240
30 Ga0070671_100003186 3300005355 Bacteria 12788
31 Ga0070671_100144072 3300005355 Bacteria 2011
32 Ga0070667_100022631 3300005367 Bacteria 5212
33 Ga0070662_100000901 3300005457 Bacteria 18158
34 Ga0070681_10102700 3300005458 Bacteria 2804
35 Ga0068867_100038877 3300005459 Bacteria 3466
36 Ga0070698_100028674 3300005471 Bacteria 5779
37 Ga0070679_100168264 3300005530 Bacteria 2165
38 Ga0068853_100036179 3300005539 Bacteria 4196
39 Ga0068853_100061816 3300005539 Bacteria 3240
40 Ga0068853_100069585 3300005539 Bacteria 3062
41 Ga0068855_100015461 3300005563 Bacteria 9188
42 Ga0068855_100020450 3300005563 Bacteria 7937
43 Ga0068855_100060558 3300005563 Unclassified 4427
44 Ga0068855_100060696 3300005563 Bacteria 4421
45 Ga0070664_100036277 3300005564 Bacteria 4141
46 Ga0068857_100086377 3300005577 Bacteria 2805
47 Ga0068857_100135209 3300005577 Bacteria 2226
48 Ga0068857_100180864 3300005577 Bacteria 1919
49 Ga0068856_100004693 3300005614 Bacteria 13566
50 Ga0068856_100032804 3300005614 Bacteria 5086
51 Ga0068859_100032428 3300005617 Bacteria 5248
52 Ga0068864_100078754 3300005618 Bacteria 2885
53 Ga0068851_10077057 3300005834 Bacteria 1735
54 Ga0068863_100014057 3300005841 Bacteria 7713
55 Ga0068858_100055614 3300005842 Unclassified 3658
56 Ga0068858_100089429 3300005842 Bacteria 2865
57 Ga0068860_100163580 3300005843 Bacteria 2147
58 Ga0068862_100154253 3300005844 Viruses 2046
59 Ga0081539_10001463 3300005985 Bacteria 40106
60 Ga0097621_100000538 3300006237 Bacteria 26658
61 Ga0097621_100004509 3300006237 Bacteria 9708
62 Ga0097621_100011255 3300006237 Bacteria 6584
63 Ga0097621_100016427 3300006237 Bacteria 5595
64 Ga0097621_100137807 3300006237 Bacteria 2083
65 Ga0068871_100000452 3300006358 Bacteria 28201
66 Ga0068871_100002202 3300006358 Bacteria 13246
67 Ga0068871_100048085 3300006358 Bacteria 3442
68 Ga0068871_100084494 3300006358 Unclassified 2634
69 Ga0068871_100098650 3300006358 Bacteria 2444
70 Ga0075428_100232060 3300006844 Bacteria 1991
71 Ga0068865_100176347 3300006881 Bacteria 1643
72 Ga0097620_100032429 3300006931 Bacteria 5248
73 Ga0105240_10000486 3300009093 Bacteria 73492
74 Ga0105240_10001336 3300009093 Bacteria 42397
75 Ga0105240_10168964 3300009093 Bacteria 2592
76 Ga0105240_10215381 3300009093 Bacteria 2241
77 Ga0105247_10001323 3300009101 Bacteria 18089
78 Ga0114129_10001943 3300009147 Bacteria 28301
79 Ga0105242_10050586 3300009176 Bacteria 3383
80 Ga0105248_10090426 3300009177 Bacteria 3447
81 Ga0105237_10000340 3300009545 Bacteria 65768
82 Ga0105237_10006210 3300009545 Bacteria 13323
83 Ga0105237_10013599 3300009545 Bacteria 8526
84 Ga0105239_10002914 3300010375 Bacteria 21377
85 Ga0105239_10007221 3300010375 Bacteria 12762
86 Ga0157373_10002234 3300013100 Bacteria 14659
87 Ga0157371_10012233 3300013102 Bacteria 6570
88 Ga0157370_10034508 3300013104 Bacteria 4925
89 Ga0157370_10048122 3300013104 Bacteria 4086
90 Ga0157369_10004718 3300013105 Bacteria 16027
91 Ga0157374_10014844 3300013296 Bacteria 6825
92 Ga0157374_10019261 3300013296 Bacteria 6037
93 Ga0157374_10034411 3300013296 Unclassified 4627
94 Ga0157374_10072263 3300013296 Unclassified 3255
95 Ga0157378_10005689 3300013297 Bacteria 10910
96 Ga0157378_10021894 3300013297 Bacteria 5621
97 Ga0157378_10096769 3300013297 Bacteria 2690
98 Ga0163162_10001458 3300013306 Bacteria 21978
99 Ga0163162_10012520 3300013306 Bacteria 8288
100 Ga0163162_10097863 3300013306 Bacteria 3023
101 Ga0163162_10139223 3300013306 Bacteria 2539
102 Ga0163162_10183385 3300013306 Bacteria 2219
103 Ga0157372_10009782 3300013307 Bacteria 10197
104 Ga0157372_10024509 3300013307 Bacteria 6555
105 Ga0157372_10026707 3300013307 Bacteria 6284
106 Ga0157372_10095420 3300013307 Bacteria 3388
107 Ga0157372_10241828 3300013307 Bacteria 2094
108 Ga0157375_10000813 3300013308 Bacteria 27357
109 Ga0157375_10116957 3300013308 Bacteria 2771
110 Ga0157377_10019730 3300014745 Bacteria 3525
111 Ga0157379_10300936 3300014968 Bacteria 1462
112 Ga0157376_10003431 3300014969 Bacteria 10909
113 Ga0157376_10032458 3300014969 Bacteria 4193
114 Ga0157376_10091495 3300014969 Bacteria 2635
115 Ga0182005_1000023 3300015265 Bacteria 246328
116 Ga0163161_10009151 3300017792 Bacteria 6845
117 Ga0209646_1005293 3300025246 Bacteria 2266
118 Ga0207426_1000009 3300025302 Bacteria 797229
119 Ga0207426_1000051 3300025302 Bacteria 391700
120 Ga0207426_1007105 3300025302 Bacteria 4735
121 Ga0207656_10002677 3300025321 Bacteria 6038
122 Ga0207710_10001137 3300025900 Bacteria 13555
123 Ga0207680_10011388 3300025903 Bacteria 4494
124 Ga0207680_10059407 3300025903 Unclassified 2323
125 Ga0207647_10000057 3300025904 Bacteria 85211
126 Ga0207647_10100340 3300025904 Bacteria 1718
127 Ga0207695_10109495 3300025913 Bacteria 2744
128 Ga0207671_10005991 3300025914 Bacteria 11000
129 Ga0207671_10011539 3300025914 Bacteria 7178
130 Ga0207671_10029927 3300025914 Bacteria 4063
131 Ga0207660_10128725 3300025917 Bacteria 1925
132 Ga0207662_10078606 3300025918 Bacteria 2008
133 Ga0207657_10011658 3300025919 Bacteria 8713
134 Ga0207657_10089261 3300025919 Bacteria 2575
135 Ga0207649_10029647 3300025920 Bacteria 3233
136 Ga0207652_10034279 3300025921 Bacteria 4277
137 Ga0207650_10047045 3300025925 Bacteria 3178
138 Ga0207644_10016609 3300025931 Bacteria 4954
139 Ga0207706_10031256 3300025933 Bacteria 4744
140 Ga0207686_10007340 3300025934 Bacteria 5931
141 Ga0207691_10134447 3300025940 Bacteria 2183
142 Ga0207679_10032244 3300025945 Bacteria 3675
143 Ga0207667_10028713 3300025949 Bacteria 6039
144 Ga0207667_10045074 3300025949 Unclassified 4671
145 Ga0207667_10049845 3300025949 Bacteria 4420
146 Ga0207668_10152840 3300025972 Bacteria 1789
147 Ga0207640_10132367 3300025981 Bacteria 1805
148 Ga0207677_10107458 3300026023 Bacteria 2070
149 Ga0207639_10013469 3300026041 Bacteria 5725
150 Ga0207639_10170449 3300026041 Unclassified 1843
151 Ga0207639_10195009 3300026041 Bacteria 1733
152 Ga0207702_10046759 3300026078 Bacteria 3644
153 Ga0207648_10038533 3300026089 Bacteria 4205
154 Ga0207648_10149772 3300026089 Bacteria 2058
155 Ga0207676_10088983 3300026095 Bacteria 2529
156 Ga0207674_10097396 3300026116 Unclassified 2925
157 Ga0207675_100297812 3300026118 Bacteria 1570
158 Ga0207683_10004259 3300026121 Bacteria 12349
159 Ga0268265_10133267 3300028380 Bacteria 2069
160 Ga0307515_10000010 3300028794 Bacteria 651586
161 Ga0307515_10000469 3300028794 Bacteria 96345
162 Ga0307511_10000455 3300030521 Bacteria 44094
163 Ga0265327_10000239 3300031251 Bacteria 109804
164 Ga0265327_10000432 3300031251 Bacteria 75935
165 Ga0265327_10016035 3300031251 Bacteria 4791
166 Ga0307513_10061174 3300031456 Bacteria 3988
167 Ga0307509_10054248 3300031507 Bacteria 4269
168 Ga0307509_10197122 3300031507 Bacteria 1856
169 Ga0307408_100001545 3300031548 Bacteria 17060
170 Ga0307408_100003413 3300031548 Bacteria 10896
171 Ga0307408_100017584 3300031548 Bacteria 4786
172 Ga0307508_10003081 3300031616 Bacteria 17141
173 Ga0307405_10019489 3300031731 Bacteria 3770
174 Ga0307412_10002839 3300031911 Bacteria 9604
175 Ga0307414_10010519 3300032004 Bacteria 5375
176 Ga0395900_0038965 3300037418 Bacteria 4899
177 Ga0395900_0096540 3300037418 Bacteria 3037
178 Ga0436365_0681528 3300039437 Bacteria 8492
179 Ga0439436_0002920 3300041404 Bacteria 5184
180 Ga0439449_0030919 3300042007 Bacteria 1996
181 Ga0439457_000716 3300042014 Bacteria 9828
182 Ga0439457_011902 3300042014 Bacteria 1966
183 Ga0451577_0003143 3300042876 Bacteria 18605
184 Ga0466969_0001938 3300044656 Bacteria 11055
185 Ga0466972_0000003 3300044658 Bacteria 391452
186 Ga0466972_0000013 3300044658 Bacteria 229345
187 Ga0466972_0008535 3300044658 Bacteria 5143
188 Ga0466966_0001169 3300044684 Bacteria 16875
189 Ga0466957_0000305 3300044842 Bacteria 24128
190 Ga0466957_0141443 3300044842 Bacteria 1550
191 Ga0466959_0001202 3300045049 Bacteria 15639
192 Ga0466959_0004333 3300045049 Bacteria 9482
193 Ga0495611_0000883 3300046648 Bacteria 16291
194 Ga0495636_0000053 3300047318 Bacteria 50598
195 Ga0496100_0022262 3300048903 Bacteria 3834
196 Ga0496110_0223668 3300048913 Bacteria 1712
197 Ga0496114_0010269 3300048917 Bacteria 7451
198 Ga0496121_0000343 3300048924 Bacteria 96972
199 Ga0496124_0073889 3300048927 Bacteria 2820
200 Ga0501032_0036935 3300049569 Bacteria 3333
201 Ga0501034_0015752 3300049571 Bacteria 7763
202 Ga0501034_0022539 3300049571 Bacteria 6417
203 Ga0501034_0039084 3300049571 Bacteria 4806
204 Ga0501037_0083075 3300049573 Bacteria 2320
205 Ga0501038_0010077 3300049574 Bacteria 8653
206 Ga0501043_0066559 3300049579 Bacteria 2830
207 Ga0501046_0004347 3300049580 Bacteria 12900
208 Ga0501047_0018765 3300049581 Bacteria 6633
209 Ga0501047_0055464 3300049581 Bacteria 3832
210 Ga0501047_0142023 3300049581 Bacteria 2279
211 Ga0501048_0046950 3300049582 Bacteria 3083
212 Ga0501070_0078753 3300049586 Bacteria 2727
213 Ga0501073_0060344 3300049589 Bacteria 2646
214 Ga0501074_0000815 3300049590 Bacteria 19756
215 Ga0501225_0004989 3300049705 Bacteria 3922
216 Ga0501083_0022895 3300049744 Bacteria 4336
217 Ga0501044_0029191 3300049823 Bacteria 5817
218 Ga0501044_0041725 3300049823 Bacteria 4777
219 Ga0501044_0055651 3300049823 Bacteria 4062
220 nmdc:mga05p37_1237_c1 3300050507 Bacteria 29632
221 nmdc:mga09592_121321_c1 3300050508 Bacteria 2246
222 Ga0500578_0000155 3300053086 Bacteria 80380
223 Ga0500646_0004456 3300053090 Unclassified 3549
224 Ga0500583_0000043 3300053092 Bacteria 81313
225 Ga0500583_0001101 3300053092 Bacteria 7708
226 Ga0500650_0050982 3300053098 Bacteria 1922
227 Ga0500562_000077 3300053108 Bacteria 45189
228 Ga0500568_0001558 3300053139 Bacteria 14518
229 Ga0500589_032283 3300053147 Bacteria 2441
230 Ga0500604_0016162 3300053151 Bacteria 2053
231 Ga0500616_0081989 3300053153 Unclassified 1619
232 Ga0500622_0003322 3300053156 Bacteria 10864
233 Ga0500622_0052623 3300053156 Bacteria 2093
234 Ga0500645_007224 3300053730 Bacteria 3888
235 2738726280 2738541278 Bacteria 9755573
236 2819572532 2818991442 Bacteria 8318214
237 2819590720 2818991444 Bacteria 6968812
238 2819680699 2818991460 Bacteria 7595395
239 2821140074 2821136567 Bacteria 8080116
240 2839991412 2839989709 Bacteria 3773432
241 2881957396 2881955468 Bacteria 3545609
242 2883072737 2883068021 Bacteria 6192739
243 2884795439 2884791551 Bacteria 8511252
244 2896087912 2896085136 Bacteria 6129793
245 2904472195 2904467357 Bacteria 8057758
246 2929157737 2929154850 Bacteria 6753285
247 2929178984 2929177148 Bacteria 7883697
248 2945981388 2945977869 Bacteria 7777518
249 2946019213 2946013367 Bacteria 7766675
250 Ga0466970_0000607
251 SwRhRL2b_contig_1790489
252 JGI25406J46586_10001143
253 rootH2_10013043
254 rootH2_10015349
255 rootH2_10172890
256 rootL2_10048871
257 rootH1_10002797
258 rootH1_10044844
259 JGI25160J50197_1001926
260 JGI25160J50197_1004705
261 Ga0065704_10070136
262 Ga0065704_10080603
263 Ga0065712_10003124
264 Ga0065712_10003179
265 Ga0065707_10128623
266 Ga0070658_10000290
267 Ga0070658_10024137
268 Ga0070683_100009554
269 Ga0070683_100023084
270 Ga0070670_100207058
271 Ga0068869_100034791
272 Ga0068869_100107352
273 Ga0070666_10025995
274 Ga0070666_10074517
275 Ga0070660_100003720
276 Ga0070689_100141820
277 Ga0070661_100011643
278 Ga0070675_100020772
279 Ga0070671_100003186
280 Ga0070671_100144072
281 Ga0070667_100022631
282 Ga0070662_100000901
283 Ga0070681_10102700
284 Ga0068867_100038877
285 Ga0070698_100028674
286 Ga0070679_100168264
287 Ga0068853_100036179
288 Ga0068853_100061816
289 Ga0068853_100069585
290 Ga0068855_100015461
291 Ga0068855_100020450
292 Ga0068855_100060558
293 Ga0068855_100060696
294 Ga0070664_100036277
295 Ga0068857_100086377
296 Ga0068857_100135209
297 Ga0068857_100180864
298 Ga0068856_100004693
299 Ga0068856_100032804
300 Ga0068859_100032428
301 Ga0068864_100078754
302 Ga0068851_10077057
303 Ga0068863_100014057
304 Ga0068858_100055614
305 Ga0068858_100089429
306 Ga0068860_100163580
307 Ga0068862_100154253
308 Ga0081539_10001463
309 Ga0097621_100000538
310 Ga0097621_100004509
311 Ga0097621_100011255
312 Ga0097621_100016427
313 Ga0097621_100137807
314 Ga0068871_100000452
315 Ga0068871_100002202
316 Ga0068871_100048085
317 Ga0068871_100084494
318 Ga0068871_100098650
319 Ga0075428_100232060
320 Ga0068865_100176347
321 Ga0097620_100032429
322 Ga0105240_10000486
323 Ga0105240_10001336
324 Ga0105240_10168964
325 Ga0105240_10215381
326 Ga0105247_10001323
327 Ga0114129_10001943
328 Ga0105242_10050586
329 Ga0105248_10090426
330 Ga0105237_10000340
331 Ga0105237_10006210
332 Ga0105237_10013599
333 Ga0105239_10002914
334 Ga0105239_10007221
335 Ga0157373_10002234
336 Ga0157371_10012233
337 Ga0157370_10034508
338 Ga0157370_10048122
339 Ga0157369_10004718
340 Ga0157374_10014844
341 Ga0157374_10019261
342 Ga0157374_10034411
343 Ga0157374_10072263
344 Ga0157378_10005689
345 Ga0157378_10021894
346 Ga0157378_10096769
347 Ga0163162_10001458
348 Ga0163162_10012520
349 Ga0163162_10097863
350 Ga0163162_10139223
351 Ga0163162_10183385
352 Ga0157372_10009782
353 Ga0157372_10024509
354 Ga0157372_10026707
355 Ga0157372_10095420
356 Ga0157372_10241828
357 Ga0157375_10000813
358 Ga0157375_10116957
359 Ga0157377_10019730
360 Ga0157379_10300936
361 Ga0157376_10003431
362 Ga0157376_10032458
363 Ga0157376_10091495
364 Ga0182005_1000023
365 Ga0163161_10009151
366 Ga0209646_1005293
367 Ga0207426_1000009
368 Ga0207426_1000051
369 Ga0207426_1007105
370 Ga0207656_10002677
371 Ga0207710_10001137
372 Ga0207680_10011388
373 Ga0207680_10059407
374 Ga0207647_10000057
375 Ga0207647_10100340
376 Ga0207695_10109495
377 Ga0207671_10005991
378 Ga0207671_10011539
379 Ga0207671_10029927
380 Ga0207660_10128725
381 Ga0207662_10078606
382 Ga0207657_10011658
383 Ga0207657_10089261
384 Ga0207649_10029647
385 Ga0207652_10034279
386 Ga0207650_10047045
387 Ga0207644_10016609
388 Ga0207706_10031256
389 Ga0207686_10007340
390 Ga0207691_10134447
391 Ga0207679_10032244
392 Ga0207667_10028713
393 Ga0207667_10045074
394 Ga0207667_10049845
395 Ga0207668_10152840
396 Ga0207640_10132367
397 Ga0207677_10107458
398 Ga0207639_10013469
399 Ga0207639_10170449
400 Ga0207639_10195009
401 Ga0207702_10046759
402 Ga0207648_10038533
403 Ga0207648_10149772
404 Ga0207676_10088983
405 Ga0207674_10097396
406 Ga0207675_100297812
407 Ga0207683_10004259
408 Ga0268265_10133267
409 Ga0307515_10000010
410 Ga0307515_10000469
411 Ga0307511_10000455
412 Ga0265327_10000239
413 Ga0265327_10000432
414 Ga0265327_10016035
415 Ga0307513_10061174
416 Ga0307509_10054248
417 Ga0307509_10197122
418 Ga0307408_100001545
419 Ga0307408_100003413
420 Ga0307408_100017584
421 Ga0307508_10003081
422 Ga0307405_10019489
423 Ga0307412_10002839
424 Ga0307414_10010519
425 Ga0395900_0038965
426 Ga0395900_0096540
427 Ga0436365_0681528
428 Ga0439436_0002920
429 Ga0439449_0030919
430 Ga0439457_000716
431 Ga0439457_011902
432 Ga0451577_0003143
433 Ga0466969_0001938
434 Ga0466972_0000003
435 Ga0466972_0000013
436 Ga0466972_0008535
437 Ga0466966_0001169
438 Ga0466957_0000305
439 Ga0466957_0141443
440 Ga0466959_0001202
441 Ga0466959_0004333
442 Ga0495611_0000883
443 Ga0495636_0000053
444 Ga0496100_0022262
445 Ga0496110_0223668
446 Ga0496114_0010269
447 Ga0496121_0000343
448 Ga0496124_0073889
449 Ga0501032_0036935
450 Ga0501034_0015752
451 Ga0501034_0022539
452 Ga0501034_0039084
453 Ga0501037_0083075
454 Ga0501038_0010077
455 Ga0501043_0066559
456 Ga0501046_0004347
457 Ga0501047_0018765
458 Ga0501047_0055464
459 Ga0501047_0142023
460 Ga0501048_0046950
461 Ga0501070_0078753
462 Ga0501073_0060344
463 Ga0501074_0000815
464 Ga0501225_0004989
465 Ga0501083_0022895
466 Ga0501044_0029191
467 Ga0501044_0041725
468 Ga0501044_0055651
469 nmdc:mga05p37_1237_c1
470 nmdc:mga09592_121321_c1
471 Ga0500578_0000155
472 Ga0500646_0004456
473 Ga0500583_0000043
474 Ga0500583_0001101
475 Ga0500650_0050982
476 Ga0500562_000077
477 Ga0500568_0001558
478 Ga0500589_032283
479 Ga0500604_0016162
480 Ga0500616_0081989
481 Ga0500622_0003322
482 Ga0500622_0052623
483 Ga0500645_007224
484 2738726280
485 2819572532
486 2819590720
487 2819680699
488 2821140074
489 2839991412
490 2881957396
491 2883072737
492 2884795439
493 2896087912
494 2904472195
495 2929157737
496 2929178984
497 2945981388
498 2946019213

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13636

Methyltranf_PUA

RNA-binding PUA-like domain of methyltransferase RsmF

452

500

0.97

PF17125

Methyltr_RsmF_N

N-terminal domain of 16S rRNA methyltransferase RsmF

53

138

0.89

PF01189

Methyltr_RsmB-F

16S rRNA methyltransferase RsmB/F

148

347

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yxl-assembly1.cif.gz_A crystal structure of ph0851 0.8805 2 293
8esq-assembly1.cif.gz_q ytm1 associated nascent 60s ribosome state 2 0.8741 4 295
8i9z-assembly1.cif.gz_CP cryo-em structure of a chaetomium thermophilum pre-60s ribosomal subunit - state spb4 0.8592 4 295
8i9y-assembly1.cif.gz_CP cryo-em structure of a chaetomium thermophilum pre-60s ribosomal subunit - ytm1-2 0.8585 4 295
8fky-assembly1.cif.gz_SY human nucleolar pre-60s ribosomal subunit (state f) 0.8549 8 301
ID Description Score Start End Superfamily
2yxlA04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9036 81 293 3.40.50.150
2yxlA04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8994 81 293 3.40.50.150
af_Q2FZ67_236_433_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8957 85 294 3.40.50.150
af_P40991_338_614_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8906 100 298 3.40.50.150
af_Q2FZ67_236_433_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.887 85 294 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A4U9KTC4-F1-model_v4 deleted 0.9692 4 448
AF-A0A7V9SSA0-F1-model_v4 RNA methyltransferase 0.967 1 445 GO:0001510
GO:0003723
GO:0006364
GO:0008173
AF-A0A2W4P3F3-F1-model_v4 rRNA methyltransferase 0.9611 4 453 GO:0001510
GO:0003723
GO:0006364
GO:0008173
AF-A0A7V9SSA0-F1-model_v4 RNA methyltransferase 0.9606 1 445 GO:0001510
GO:0003723
GO:0006364
GO:0008173
AF-A0A4Q3R883-F1-model_v4 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.9576 49 383 GO:0001510
GO:0003723
GO:0006364
GO:0008173

Map