F360977
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 249 | 158 | 498 | 604 |
Family's Representative Sequence
| Representative Sequence | 3300045976|Ga0466967_0084257|Ga0466967_0084257_707_2500 |
| Length | 592 |
| Sequence | VTIETPELTTNRKLLEWVQEVAEMTQPDDIHWCDGSAEEYDRLCQLLVDAGTFERLSDAKRPNSYLAFSDPDDVARVEDRTFICSREEKDAGPTNNWRDPDDMRATLREKFTGSMRGRTMYVVPFSMGPLGSPIAEIGVQCTDSAYVAVSMRIMTRMGARALDVLGDKGTFVPCLHSVGAPLAEGEESGPWPCNEEKYIVHFPEDREIWSYGSGYGGNALLGKKCLALRIASAMARDEGWLAEHMLILKVTSPEGDVRYLTGAFPSACGKTNLAMLIPTLEGWKVETVGDDIAWMKFGEDGRLHAVNPEAGFFGVAPGTNNAIATAESNSIFTNCALTDDGDVWWEGLTDEPPAHVVDWKRNDWTPESDSPAAHPNARFTVPAAQCPSIADEWEDPKGVPIDAFLFGGRRSSVVPLVREAFDWEHAVFMGATMSSETTAAASGAVGQLRFDPFAMLPFCGYNMADYFRHWLSIGKRDGAKLPKVFYVNWFRKDEDGNFLWPGFGENSRVLAWIVRRCEGKAQARQTPIGLVPTDLDTDGLDIAPEALEALLSFDADGVRAELPQIRDHLGQFGDALPEELSAQLEGLAGRLG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 2 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 3 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 5 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 9 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 10 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 11 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 12 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 13 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 14 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 15 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 17 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 18 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 19 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 20 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 21 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 32 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 33 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300030763 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 55 | 3300030880 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 56 | 3300030882 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI6 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 57 | 3300031043 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 58 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 59 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 60 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 61 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 62 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 63 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 64 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 65 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 66 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 67 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 68 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 69 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 70 | 3300036457 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 71 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 72 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 73 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 74 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 75 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 76 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 77 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 78 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 119 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 120 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 121 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 122 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 123 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 124 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 125 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 126 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 127 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 128 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 129 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 130 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 135 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 136 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 137 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 138 | 2579778521 | Frankia torreyi CpI1-S | Isolate | Unclassified |
| 139 | 2619618881 | Frankia sp. ACN1ag | Isolate | Unclassified |
| 140 | 2619619003 | Frankia sp. CpI1-P | Isolate | Nodule |
| 141 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 142 | 2675903060 | Nonomuraea wenchangensis CGMCC 4.5598 | Isolate | Rhizosphere |
| 143 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 144 | 2773857759 | Microbacterium sp. 1294 | Isolate | Unclassified |
| 145 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 146 | 2784132148 | Streptomyces sp. E5N91 SAI-083 | Isolate | Unclassified |
| 147 | 2802429296 | Streptomyces sampsonii KJ40 | Isolate | Rhizosphere |
| 148 | 2873314349 | Sphaerisporangium siamense DSM 45784 | Isolate | Rhizosphere |
| 149 | 2877676314 | Streptomyces griseorubiginosus 3E-1 | Isolate | Unclassified |
| 150 | 2884693830 | Nonomuraea phyllanthi WYY166 | Isolate | Unclassified |
| 151 | 2895427314 | Nonomuraea sp. PA05 | Isolate | Unclassified |
| 152 | 2895442618 | Nonomuraea phyllanthi PA1-10 | Isolate | Unclassified |
| 153 | 2977251589 | Microbacterium sp. SORGH_AS 505 | Isolate | Unclassified |
| 154 | 3006425503 | Streptomyces zingiberis PLAI1-29 | Isolate | Unclassified |
| 155 | 8025413630 | Streptomyces sp. CAI-17 | Isolate | Rhizosphere |
| 156 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 157 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 158 | 8055157932 | Frankia umida Ag45/Mut15 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.76 |
| Metatranscriptomes | 2.81 |
| Isolates | 8.43 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.01 |
| Nodule | 2.01 |
| Rhizoplane | 3.21 |
| Rhizosphere | 85.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466967_0084257 | 3300045976 | Bacteria | 2876 |
| 2 | JGI24746J21847_1000061 | 3300001977 | Bacteria | 11131 |
| 3 | Ga0070682_100007090 | 3300005337 | Bacteria | 6307 |
| 4 | Ga0070688_100066505 | 3300005365 | Bacteria | 2294 |
| 5 | Ga0070711_100014647 | 3300005439 | Bacteria | 4943 |
| 6 | Ga0070706_100005108 | 3300005467 | Bacteria | 12525 |
| 7 | Ga0070697_100007484 | 3300005536 | Bacteria | 8500 |
| 8 | Ga0068855_100004862 | 3300005563 | Bacteria | 16402 |
| 9 | Ga0068855_100085051 | 3300005563 | Bacteria | 3661 |
| 10 | Ga0068854_100000426 | 3300005578 | Bacteria | 26255 |
| 11 | Ga0068852_100000175 | 3300005616 | Bacteria | 43326 |
| 12 | Ga0068858_100000811 | 3300005842 | Bacteria | 32696 |
| 13 | Ga0068862_100063958 | 3300005844 | Bacteria | 3166 |
| 14 | Ga0081455_10003849 | 3300005937 | Bacteria | 17119 |
| 15 | Ga0081539_10002609 | 3300005985 | Bacteria | 24708 |
| 16 | Ga0081539_10041797 | 3300005985 | Bacteria | 2676 |
| 17 | Ga0070717_10019769 | 3300006028 | Bacteria | 5288 |
| 18 | Ga0070717_10042929 | 3300006028 | Bacteria | 3689 |
| 19 | Ga0075365_10012880 | 3300006038 | Bacteria | 4985 |
| 20 | Ga0097621_100009458 | 3300006237 | Bacteria | 7075 |
| 21 | Ga0068871_100030627 | 3300006358 | Bacteria | 4239 |
| 22 | Ga0075428_100000210 | 3300006844 | Bacteria | 56294 |
| 23 | Ga0075431_100173435 | 3300006847 | Bacteria | 2215 |
| 24 | Ga0105240_10007322 | 3300009093 | Bacteria | 16057 |
| 25 | Ga0105245_10144707 | 3300009098 | Bacteria | 2242 |
| 26 | Ga0105243_10019240 | 3300009148 | Bacteria | 5177 |
| 27 | Ga0105248_10000147 | 3300009177 | Bacteria | 81699 |
| 28 | Ga0105237_10007828 | 3300009545 | Bacteria | 11650 |
| 29 | Ga0105238_10056910 | 3300009551 | Bacteria | 3922 |
| 30 | Ga0105249_10135469 | 3300009553 | Bacteria | 2356 |
| 31 | Ga0105239_10036201 | 3300010375 | Bacteria | 5420 |
| 32 | Ga0157380_10042050 | 3300014326 | Bacteria | 3571 |
| 33 | Ga0157379_10005654 | 3300014968 | Bacteria | 10743 |
| 34 | Ga0197907_11254770 | 3300020069 | Bacteria | 3230 |
| 35 | Ga0224712_10030443 | 3300022467 | Bacteria | 1948 |
| 36 | Ga0207653_10003064 | 3300025885 | Bacteria | 5303 |
| 37 | Ga0207643_10011430 | 3300025908 | Bacteria | 4795 |
| 38 | Ga0207684_10004676 | 3300025910 | Bacteria | 12853 |
| 39 | Ga0207684_10016858 | 3300025910 | Bacteria | 6272 |
| 40 | Ga0207654_10005596 | 3300025911 | Bacteria | 6355 |
| 41 | Ga0207695_10002585 | 3300025913 | Bacteria | 26552 |
| 42 | Ga0207671_10000475 | 3300025914 | Bacteria | 54447 |
| 43 | Ga0207663_10012063 | 3300025916 | Bacteria | 4660 |
| 44 | Ga0207662_10004968 | 3300025918 | Bacteria | 7036 |
| 45 | Ga0207694_10001328 | 3300025924 | Bacteria | 21278 |
| 46 | Ga0207700_10016166 | 3300025928 | Bacteria | 4948 |
| 47 | Ga0207700_10022375 | 3300025928 | Bacteria | 4337 |
| 48 | Ga0207700_10022902 | 3300025928 | Bacteria | 4294 |
| 49 | Ga0207664_10001930 | 3300025929 | Bacteria | 13619 |
| 50 | Ga0207664_10017379 | 3300025929 | Bacteria | 5271 |
| 51 | Ga0207664_10054062 | 3300025929 | Bacteria | 3181 |
| 52 | Ga0207690_10005487 | 3300025932 | Bacteria | 7481 |
| 53 | Ga0207711_10000056 | 3300025941 | Bacteria | 135485 |
| 54 | Ga0207689_10064383 | 3300025942 | Bacteria | 3016 |
| 55 | Ga0207667_10011949 | 3300025949 | Bacteria | 10052 |
| 56 | Ga0207668_10010258 | 3300025972 | Bacteria | 5655 |
| 57 | Ga0207703_10000052 | 3300026035 | Bacteria | 143988 |
| 58 | Ga0207678_10012972 | 3300026067 | Bacteria | 7314 |
| 59 | Ga0207678_10034185 | 3300026067 | Bacteria | 4428 |
| 60 | Ga0207708_10016595 | 3300026075 | Bacteria | 5540 |
| 61 | Ga0207675_100046229 | 3300026118 | Bacteria | 4066 |
| 62 | Ga0207675_100055454 | 3300026118 | Bacteria | 3697 |
| 63 | Ga0207683_10004653 | 3300026121 | Bacteria | 11826 |
| 64 | Ga0265763_1000014 | 3300030763 | Bacteria | 6928 |
| 65 | Ga0265776_100016 | 3300030880 | Bacteria | 4877 |
| 66 | Ga0265764_100025 | 3300030882 | Bacteria | 3839 |
| 67 | Ga0265779_100020 | 3300031043 | Bacteria | 5039 |
| 68 | Ga0316576_10041010 | 3300031727 | Bacteria | 3330 |
| 69 | Ga0307507_10000001 | 3300033179 | Bacteria | 417520 |
| 70 | Ga0373934_0000217 | 3300035086 | Bacteria | 20963 |
| 71 | Ga0373934_0003121 | 3300035086 | Bacteria | 6045 |
| 72 | Ga0373934_0003228 | 3300035086 | Bacteria | 5965 |
| 73 | Ga0373953_0000010 | 3300035117 | Bacteria | 47815 |
| 74 | Ga0373953_0002936 | 3300035117 | Bacteria | 5208 |
| 75 | Ga0373953_0013816 | 3300035117 | Bacteria | 2891 |
| 76 | Ga0373954_0008441 | 3300035118 | Bacteria | 4519 |
| 77 | Ga0373957_0000044 | 3300035120 | Bacteria | 32547 |
| 78 | Ga0373957_0006708 | 3300035120 | Bacteria | 3641 |
| 79 | Ga0373955_0000022 | 3300035172 | Bacteria | 61667 |
| 80 | Ga0373955_0005336 | 3300035172 | Bacteria | 5772 |
| 81 | Ga0373955_0016243 | 3300035172 | Bacteria | 3660 |
| 82 | Ga0373955_0033815 | 3300035172 | Bacteria | 2694 |
| 83 | Ga0316574_0023646 | 3300035398 | Bacteria | 3671 |
| 84 | Ga0373924_0005863 | 3300035410 | Bacteria | 4375 |
| 85 | Ga0373935_0024047 | 3300035692 | Bacteria | 3746 |
| 86 | Ga0373933_0000023 | 3300035724 | Bacteria | 94091 |
| 87 | Ga0373933_0023642 | 3300035724 | Bacteria | 3513 |
| 88 | Ga0373933_0047357 | 3300035724 | Bacteria | 2556 |
| 89 | Ga0373937_0000091 | 3300036401 | Bacteria | 83145 |
| 90 | Ga0373937_0004843 | 3300036401 | Bacteria | 11438 |
| 91 | Ga0373937_0044892 | 3300036401 | Bacteria | 4037 |
| 92 | Ga0373937_0093727 | 3300036401 | Bacteria | 2784 |
| 93 | Ga0265778_000007 | 3300036457 | Bacteria | 9953 |
| 94 | Ga0373925_0000898 | 3300037068 | Bacteria | 27178 |
| 95 | Ga0373925_0013266 | 3300037068 | Bacteria | 5964 |
| 96 | Ga0466969_0001919 | 3300044656 | Bacteria | 11114 |
| 97 | Ga0466969_0033436 | 3300044656 | Bacteria | 2610 |
| 98 | Ga0466969_0050945 | 3300044656 | Bacteria | 2040 |
| 99 | Ga0466961_0003038 | 3300044693 | Bacteria | 10409 |
| 100 | Ga0466961_0034431 | 3300044693 | Bacteria | 3252 |
| 101 | Ga0466971_0002198 | 3300044719 | Bacteria | 8247 |
| 102 | Ga0466970_0013700 | 3300044765 | Bacteria | 4159 |
| 103 | Ga0466959_0000176 | 3300045049 | Bacteria | 42306 |
| 104 | Ga0466958_0006319 | 3300045836 | Bacteria | 6439 |
| 105 | Ga0495592_0000066 | 3300046454 | Bacteria | 95762 |
| 106 | Ga0495592_0003593 | 3300046454 | Bacteria | 11151 |
| 107 | Ga0495629_0012481 | 3300046459 | Bacteria | 6154 |
| 108 | Ga0495641_0034398 | 3300046461 | Bacteria | 2395 |
| 109 | Ga0495651_0000062 | 3300046462 | Bacteria | 80165 |
| 110 | Ga0495651_0008366 | 3300046462 | Bacteria | 7931 |
| 111 | Ga0495651_0008728 | 3300046462 | Bacteria | 7772 |
| 112 | Ga0495651_0013710 | 3300046462 | Bacteria | 6265 |
| 113 | Ga0495651_0026060 | 3300046462 | Bacteria | 4552 |
| 114 | Ga0495651_0034998 | 3300046462 | Bacteria | 3913 |
| 115 | Ga0495653_0014304 | 3300046463 | Bacteria | 6471 |
| 116 | Ga0495653_0078672 | 3300046463 | Bacteria | 2444 |
| 117 | Ga0495580_0027564 | 3300046472 | Bacteria | 4132 |
| 118 | Ga0495582_0008441 | 3300046473 | Bacteria | 5683 |
| 119 | Ga0495662_0002167 | 3300046476 | Bacteria | 9865 |
| 120 | Ga0495664_0007116 | 3300046477 | Bacteria | 6201 |
| 121 | Ga0495664_0014050 | 3300046477 | Bacteria | 4536 |
| 122 | Ga0495594_0009562 | 3300046499 | Bacteria | 5011 |
| 123 | Ga0495608_0000052 | 3300046511 | Bacteria | 94085 |
| 124 | Ga0495608_0001169 | 3300046511 | Bacteria | 18590 |
| 125 | Ga0495608_0011594 | 3300046511 | Bacteria | 6134 |
| 126 | Ga0495618_0043686 | 3300046514 | Bacteria | 2828 |
| 127 | Ga0495628_0001812 | 3300046516 | Bacteria | 19393 |
| 128 | Ga0495628_0004411 | 3300046516 | Bacteria | 12483 |
| 129 | Ga0495628_0030344 | 3300046516 | Bacteria | 4377 |
| 130 | Ga0495630_0019937 | 3300046517 | Bacteria | 4936 |
| 131 | Ga0495630_0022137 | 3300046517 | Bacteria | 4695 |
| 132 | Ga0495666_0014562 | 3300046526 | Bacteria | 3916 |
| 133 | Ga0495652_0000885 | 3300046529 | Bacteria | 34425 |
| 134 | Ga0495652_0001353 | 3300046529 | Bacteria | 27311 |
| 135 | Ga0495652_0002475 | 3300046529 | Bacteria | 18986 |
| 136 | Ga0495652_0019774 | 3300046529 | Bacteria | 5991 |
| 137 | Ga0495665_0001050 | 3300046531 | Bacteria | 14676 |
| 138 | Ga0495640_0025465 | 3300046533 | Bacteria | 4291 |
| 139 | Ga0495640_0056831 | 3300046533 | Bacteria | 2671 |
| 140 | Ga0495587_0000059 | 3300046536 | Bacteria | 94063 |
| 141 | Ga0495587_0001510 | 3300046536 | Bacteria | 15481 |
| 142 | Ga0495587_0005033 | 3300046536 | Bacteria | 8655 |
| 143 | Ga0495587_0044197 | 3300046536 | Bacteria | 2650 |
| 144 | Ga0495645_0000890 | 3300046543 | Bacteria | 20373 |
| 145 | Ga0495645_0005897 | 3300046543 | Bacteria | 8459 |
| 146 | Ga0495667_0000119 | 3300046559 | Bacteria | 56812 |
| 147 | Ga0495667_0001721 | 3300046559 | Bacteria | 14519 |
| 148 | Ga0495667_0009517 | 3300046559 | Bacteria | 6584 |
| 149 | Ga0495667_0017042 | 3300046559 | Bacteria | 4905 |
| 150 | Ga0495634_0014611 | 3300046642 | Bacteria | 5655 |
| 151 | Ga0495625_0000587 | 3300046660 | Bacteria | 52838 |
| 152 | Ga0495635_0022226 | 3300046663 | Bacteria | 4417 |
| 153 | Ga0495635_0023330 | 3300046663 | Bacteria | 4312 |
| 154 | Ga0495635_0035477 | 3300046663 | Bacteria | 3457 |
| 155 | Ga0495635_0050026 | 3300046663 | Bacteria | 2881 |
| 156 | Ga0495657_0000062 | 3300046675 | Bacteria | 96063 |
| 157 | Ga0495657_0002617 | 3300046675 | Bacteria | 15057 |
| 158 | Ga0495599_0000116 | 3300046678 | Bacteria | 53236 |
| 159 | Ga0495599_0001894 | 3300046678 | Bacteria | 12120 |
| 160 | Ga0495599_0048695 | 3300046678 | Bacteria | 2657 |
| 161 | Ga0495623_0017708 | 3300046679 | Bacteria | 4601 |
| 162 | Ga0495623_0064531 | 3300046679 | Bacteria | 2291 |
| 163 | Ga0495646_0003397 | 3300046680 | Bacteria | 9891 |
| 164 | Ga0495646_0014023 | 3300046680 | Bacteria | 5096 |
| 165 | Ga0495646_0055430 | 3300046680 | Bacteria | 2380 |
| 166 | Ga0495647_0005445 | 3300046681 | Bacteria | 4171 |
| 167 | Ga0495613_0000179 | 3300046689 | Bacteria | 62109 |
| 168 | Ga0495613_0029580 | 3300046689 | Bacteria | 4072 |
| 169 | Ga0495624_0049044 | 3300046690 | Bacteria | 2678 |
| 170 | Ga0495600_0000615 | 3300046809 | Bacteria | 18394 |
| 171 | Ga0495600_0005399 | 3300046809 | Bacteria | 7706 |
| 172 | Ga0495600_0010976 | 3300046809 | Bacteria | 5636 |
| 173 | Ga0495581_0004333 | 3300047315 | Bacteria | 8193 |
| 174 | Ga0495581_0029290 | 3300047315 | Bacteria | 3191 |
| 175 | Ga0495604_0000059 | 3300047317 | Bacteria | 96063 |
| 176 | Ga0495604_0000137 | 3300047317 | Bacteria | 62542 |
| 177 | Ga0495604_0007976 | 3300047317 | Bacteria | 8387 |
| 178 | Ga0495604_0010380 | 3300047317 | Bacteria | 7378 |
| 179 | Ga0495604_0036084 | 3300047317 | Bacteria | 3899 |
| 180 | Ga0495604_0059322 | 3300047317 | Bacteria | 2933 |
| 181 | Ga0495604_0091802 | 3300047317 | Bacteria | 2251 |
| 182 | Ga0495604_0098857 | 3300047317 | Bacteria | 2148 |
| 183 | Ga0495674_0013014 | 3300047319 | Bacteria | 7831 |
| 184 | Ga0495674_0031936 | 3300047319 | Bacteria | 4778 |
| 185 | Ga0495674_0044370 | 3300047319 | Bacteria | 3953 |
| 186 | Ga0495680_0000125 | 3300047322 | Bacteria | 75140 |
| 187 | Ga0495680_0016170 | 3300047322 | Bacteria | 6415 |
| 188 | Ga0495680_0037072 | 3300047322 | Bacteria | 3908 |
| 189 | Ga0495675_0000364 | 3300047444 | Bacteria | 31565 |
| 190 | Ga0495675_0006175 | 3300047444 | Bacteria | 7329 |
| 191 | Ga0495675_0020031 | 3300047444 | Bacteria | 4251 |
| 192 | Ga0495675_0081307 | 3300047444 | Bacteria | 2040 |
| 193 | Ga0495684_0024778 | 3300047471 | Bacteria | 4613 |
| 194 | Ga0495684_0042154 | 3300047471 | Bacteria | 3497 |
| 195 | Ga0495684_0118971 | 3300047471 | Bacteria | 1990 |
| 196 | Ga0495593_0012363 | 3300047673 | Bacteria | 4878 |
| 197 | Ga0495593_0020146 | 3300047673 | Bacteria | 3735 |
| 198 | Ga0495602_0000041 | 3300048088 | Bacteria | 126954 |
| 199 | Ga0495602_0000193 | 3300048088 | Bacteria | 57395 |
| 200 | Ga0495602_0005599 | 3300048088 | Bacteria | 13189 |
| 201 | Ga0496102_0003064 | 3300048905 | Bacteria | 14155 |
| 202 | Ga0496105_0076711 | 3300048908 | Bacteria | 2760 |
| 203 | Ga0496106_0014960 | 3300048909 | Bacteria | 5740 |
| 204 | Ga0496106_0048432 | 3300048909 | Bacteria | 3200 |
| 205 | Ga0496109_0009188 | 3300048912 | Bacteria | 8419 |
| 206 | Ga0496110_0022455 | 3300048913 | Bacteria | 5358 |
| 207 | Ga0496112_0011019 | 3300048915 | Bacteria | 8240 |
| 208 | Ga0496113_0036483 | 3300048916 | Bacteria | 3602 |
| 209 | Ga0496117_0025747 | 3300048920 | Bacteria | 4616 |
| 210 | Ga0496118_0001340 | 3300048921 | Bacteria | 37345 |
| 211 | Ga0496118_0002910 | 3300048921 | Bacteria | 22256 |
| 212 | Ga0496119_0005129 | 3300048922 | Bacteria | 12695 |
| 213 | Ga0496121_0010820 | 3300048924 | Bacteria | 10212 |
| 214 | Ga0496124_0104263 | 3300048927 | Bacteria | 2293 |
| 215 | Ga0495601_0000013 | 3300053077 | Bacteria | 226476 |
| 216 | Ga0495612_0001075 | 3300053078 | Bacteria | 11182 |
| 217 | Ga0495612_0007300 | 3300053078 | Bacteria | 4520 |
| 218 | Ga0495612_0008214 | 3300053078 | Bacteria | 4241 |
| 219 | Ga0495612_0031776 | 3300053078 | Bacteria | 2130 |
| 220 | Ga0495595_0002034 | 3300053084 | Bacteria | 7854 |
| 221 | Ga0495619_0020705 | 3300053085 | Bacteria | 4193 |
| 222 | Ga0495619_0020880 | 3300053085 | Bacteria | 4176 |
| 223 | Ga0500644_0006265 | 3300053088 | Bacteria | 3039 |
| 224 | Ga0500559_0000160 | 3300053136 | Bacteria | 53115 |
| 225 | Ga0500559_0001657 | 3300053136 | Bacteria | 12315 |
| 226 | Ga0500573_0000007 | 3300053140 | Bacteria | 272970 |
| 227 | Ga0466962_0000054 | 3300061719 | Bacteria | 47230 |
| 228 | Ga0466962_0028441 | 3300061719 | Bacteria | 2678 |
| 229 | 2579855248 | 2579778521 | Bacteria | 7624758 |
| 230 | 2619855183 | 2619618881 | Bacteria | 7521104 |
| 231 | 2620351418 | 2619619003 | Bacteria | 7619552 |
| 232 | 2676198302 | 2675902999 | Bacteria | 9438463 |
| 233 | 2676492943 | 2675903060 | Bacteria | 10051191 |
| 234 | 2689961166 | 2687453737 | Bacteria | 11203906 |
| 235 | 2774383549 | 2773857759 | Bacteria | 2963774 |
| 236 | 2774842880 | 2773857921 | Bacteria | 9435764 |
| 237 | 2784590014 | 2784132148 | Bacteria | 8627943 |
| 238 | 2804845187 | 2802429296 | Bacteria | 7227771 |
| 239 | 2873316775 | 2873314349 | Bacteria | 8512634 |
| 240 | 2877679480 | 2877676314 | Bacteria | 9512378 |
| 241 | 2884702989 | 2884693830 | Bacteria | 11273186 |
| 242 | 2895429563 | 2895427314 | Bacteria | 13147766 |
| 243 | 2895443829 | 2895442618 | Bacteria | 11027144 |
| 244 | 2977251949 | 2977251589 | Bacteria | 2952848 |
| 245 | 3006429605 | 3006425503 | Bacteria | 6491253 |
| 246 | 8025415408 | 8025413630 | Bacteria | 7014048 |
| 247 | 8048135263 | 8048127548 | Bacteria | 11053136 |
| 248 | 8055068845 | 8055066027 | Bacteria | 9479577 |
| 249 | 8055158753 | 8055157932 | Bacteria | 6429399 |
| 250 | Ga0466967_0084257 | |||
| 251 | JGI24746J21847_1000061 | |||
| 252 | Ga0070682_100007090 | |||
| 253 | Ga0070688_100066505 | |||
| 254 | Ga0070711_100014647 | |||
| 255 | Ga0070706_100005108 | |||
| 256 | Ga0070697_100007484 | |||
| 257 | Ga0068855_100004862 | |||
| 258 | Ga0068855_100085051 | |||
| 259 | Ga0068854_100000426 | |||
| 260 | Ga0068852_100000175 | |||
| 261 | Ga0068858_100000811 | |||
| 262 | Ga0068862_100063958 | |||
| 263 | Ga0081455_10003849 | |||
| 264 | Ga0081539_10002609 | |||
| 265 | Ga0081539_10041797 | |||
| 266 | Ga0070717_10019769 | |||
| 267 | Ga0070717_10042929 | |||
| 268 | Ga0075365_10012880 | |||
| 269 | Ga0097621_100009458 | |||
| 270 | Ga0068871_100030627 | |||
| 271 | Ga0075428_100000210 | |||
| 272 | Ga0075431_100173435 | |||
| 273 | Ga0105240_10007322 | |||
| 274 | Ga0105245_10144707 | |||
| 275 | Ga0105243_10019240 | |||
| 276 | Ga0105248_10000147 | |||
| 277 | Ga0105237_10007828 | |||
| 278 | Ga0105238_10056910 | |||
| 279 | Ga0105249_10135469 | |||
| 280 | Ga0105239_10036201 | |||
| 281 | Ga0157380_10042050 | |||
| 282 | Ga0157379_10005654 | |||
| 283 | Ga0197907_11254770 | |||
| 284 | Ga0224712_10030443 | |||
| 285 | Ga0207653_10003064 | |||
| 286 | Ga0207643_10011430 | |||
| 287 | Ga0207684_10004676 | |||
| 288 | Ga0207684_10016858 | |||
| 289 | Ga0207654_10005596 | |||
| 290 | Ga0207695_10002585 | |||
| 291 | Ga0207671_10000475 | |||
| 292 | Ga0207663_10012063 | |||
| 293 | Ga0207662_10004968 | |||
| 294 | Ga0207694_10001328 | |||
| 295 | Ga0207700_10016166 | |||
| 296 | Ga0207700_10022375 | |||
| 297 | Ga0207700_10022902 | |||
| 298 | Ga0207664_10001930 | |||
| 299 | Ga0207664_10017379 | |||
| 300 | Ga0207664_10054062 | |||
| 301 | Ga0207690_10005487 | |||
| 302 | Ga0207711_10000056 | |||
| 303 | Ga0207689_10064383 | |||
| 304 | Ga0207667_10011949 | |||
| 305 | Ga0207668_10010258 | |||
| 306 | Ga0207703_10000052 | |||
| 307 | Ga0207678_10012972 | |||
| 308 | Ga0207678_10034185 | |||
| 309 | Ga0207708_10016595 | |||
| 310 | Ga0207675_100046229 | |||
| 311 | Ga0207675_100055454 | |||
| 312 | Ga0207683_10004653 | |||
| 313 | Ga0265763_1000014 | |||
| 314 | Ga0265776_100016 | |||
| 315 | Ga0265764_100025 | |||
| 316 | Ga0265779_100020 | |||
| 317 | Ga0316576_10041010 | |||
| 318 | Ga0307507_10000001 | |||
| 319 | Ga0373934_0000217 | |||
| 320 | Ga0373934_0003121 | |||
| 321 | Ga0373934_0003228 | |||
| 322 | Ga0373953_0000010 | |||
| 323 | Ga0373953_0002936 | |||
| 324 | Ga0373953_0013816 | |||
| 325 | Ga0373954_0008441 | |||
| 326 | Ga0373957_0000044 | |||
| 327 | Ga0373957_0006708 | |||
| 328 | Ga0373955_0000022 | |||
| 329 | Ga0373955_0005336 | |||
| 330 | Ga0373955_0016243 | |||
| 331 | Ga0373955_0033815 | |||
| 332 | Ga0316574_0023646 | |||
| 333 | Ga0373924_0005863 | |||
| 334 | Ga0373935_0024047 | |||
| 335 | Ga0373933_0000023 | |||
| 336 | Ga0373933_0023642 | |||
| 337 | Ga0373933_0047357 | |||
| 338 | Ga0373937_0000091 | |||
| 339 | Ga0373937_0004843 | |||
| 340 | Ga0373937_0044892 | |||
| 341 | Ga0373937_0093727 | |||
| 342 | Ga0265778_000007 | |||
| 343 | Ga0373925_0000898 | |||
| 344 | Ga0373925_0013266 | |||
| 345 | Ga0466969_0001919 | |||
| 346 | Ga0466969_0033436 | |||
| 347 | Ga0466969_0050945 | |||
| 348 | Ga0466961_0003038 | |||
| 349 | Ga0466961_0034431 | |||
| 350 | Ga0466971_0002198 | |||
| 351 | Ga0466970_0013700 | |||
| 352 | Ga0466959_0000176 | |||
| 353 | Ga0466958_0006319 | |||
| 354 | Ga0495592_0000066 | |||
| 355 | Ga0495592_0003593 | |||
| 356 | Ga0495629_0012481 | |||
| 357 | Ga0495641_0034398 | |||
| 358 | Ga0495651_0000062 | |||
| 359 | Ga0495651_0008366 | |||
| 360 | Ga0495651_0008728 | |||
| 361 | Ga0495651_0013710 | |||
| 362 | Ga0495651_0026060 | |||
| 363 | Ga0495651_0034998 | |||
| 364 | Ga0495653_0014304 | |||
| 365 | Ga0495653_0078672 | |||
| 366 | Ga0495580_0027564 | |||
| 367 | Ga0495582_0008441 | |||
| 368 | Ga0495662_0002167 | |||
| 369 | Ga0495664_0007116 | |||
| 370 | Ga0495664_0014050 | |||
| 371 | Ga0495594_0009562 | |||
| 372 | Ga0495608_0000052 | |||
| 373 | Ga0495608_0001169 | |||
| 374 | Ga0495608_0011594 | |||
| 375 | Ga0495618_0043686 | |||
| 376 | Ga0495628_0001812 | |||
| 377 | Ga0495628_0004411 | |||
| 378 | Ga0495628_0030344 | |||
| 379 | Ga0495630_0019937 | |||
| 380 | Ga0495630_0022137 | |||
| 381 | Ga0495666_0014562 | |||
| 382 | Ga0495652_0000885 | |||
| 383 | Ga0495652_0001353 | |||
| 384 | Ga0495652_0002475 | |||
| 385 | Ga0495652_0019774 | |||
| 386 | Ga0495665_0001050 | |||
| 387 | Ga0495640_0025465 | |||
| 388 | Ga0495640_0056831 | |||
| 389 | Ga0495587_0000059 | |||
| 390 | Ga0495587_0001510 | |||
| 391 | Ga0495587_0005033 | |||
| 392 | Ga0495587_0044197 | |||
| 393 | Ga0495645_0000890 | |||
| 394 | Ga0495645_0005897 | |||
| 395 | Ga0495667_0000119 | |||
| 396 | Ga0495667_0001721 | |||
| 397 | Ga0495667_0009517 | |||
| 398 | Ga0495667_0017042 | |||
| 399 | Ga0495634_0014611 | |||
| 400 | Ga0495625_0000587 | |||
| 401 | Ga0495635_0022226 | |||
| 402 | Ga0495635_0023330 | |||
| 403 | Ga0495635_0035477 | |||
| 404 | Ga0495635_0050026 | |||
| 405 | Ga0495657_0000062 | |||
| 406 | Ga0495657_0002617 | |||
| 407 | Ga0495599_0000116 | |||
| 408 | Ga0495599_0001894 | |||
| 409 | Ga0495599_0048695 | |||
| 410 | Ga0495623_0017708 | |||
| 411 | Ga0495623_0064531 | |||
| 412 | Ga0495646_0003397 | |||
| 413 | Ga0495646_0014023 | |||
| 414 | Ga0495646_0055430 | |||
| 415 | Ga0495647_0005445 | |||
| 416 | Ga0495613_0000179 | |||
| 417 | Ga0495613_0029580 | |||
| 418 | Ga0495624_0049044 | |||
| 419 | Ga0495600_0000615 | |||
| 420 | Ga0495600_0005399 | |||
| 421 | Ga0495600_0010976 | |||
| 422 | Ga0495581_0004333 | |||
| 423 | Ga0495581_0029290 | |||
| 424 | Ga0495604_0000059 | |||
| 425 | Ga0495604_0000137 | |||
| 426 | Ga0495604_0007976 | |||
| 427 | Ga0495604_0010380 | |||
| 428 | Ga0495604_0036084 | |||
| 429 | Ga0495604_0059322 | |||
| 430 | Ga0495604_0091802 | |||
| 431 | Ga0495604_0098857 | |||
| 432 | Ga0495674_0013014 | |||
| 433 | Ga0495674_0031936 | |||
| 434 | Ga0495674_0044370 | |||
| 435 | Ga0495680_0000125 | |||
| 436 | Ga0495680_0016170 | |||
| 437 | Ga0495680_0037072 | |||
| 438 | Ga0495675_0000364 | |||
| 439 | Ga0495675_0006175 | |||
| 440 | Ga0495675_0020031 | |||
| 441 | Ga0495675_0081307 | |||
| 442 | Ga0495684_0024778 | |||
| 443 | Ga0495684_0042154 | |||
| 444 | Ga0495684_0118971 | |||
| 445 | Ga0495593_0012363 | |||
| 446 | Ga0495593_0020146 | |||
| 447 | Ga0495602_0000041 | |||
| 448 | Ga0495602_0000193 | |||
| 449 | Ga0495602_0005599 | |||
| 450 | Ga0496102_0003064 | |||
| 451 | Ga0496105_0076711 | |||
| 452 | Ga0496106_0014960 | |||
| 453 | Ga0496106_0048432 | |||
| 454 | Ga0496109_0009188 | |||
| 455 | Ga0496110_0022455 | |||
| 456 | Ga0496112_0011019 | |||
| 457 | Ga0496113_0036483 | |||
| 458 | Ga0496117_0025747 | |||
| 459 | Ga0496118_0001340 | |||
| 460 | Ga0496118_0002910 | |||
| 461 | Ga0496119_0005129 | |||
| 462 | Ga0496121_0010820 | |||
| 463 | Ga0496124_0104263 | |||
| 464 | Ga0495601_0000013 | |||
| 465 | Ga0495612_0001075 | |||
| 466 | Ga0495612_0007300 | |||
| 467 | Ga0495612_0008214 | |||
| 468 | Ga0495612_0031776 | |||
| 469 | Ga0495595_0002034 | |||
| 470 | Ga0495619_0020705 | |||
| 471 | Ga0495619_0020880 | |||
| 472 | Ga0500644_0006265 | |||
| 473 | Ga0500559_0000160 | |||
| 474 | Ga0500559_0001657 | |||
| 475 | Ga0500573_0000007 | |||
| 476 | Ga0466962_0000054 | |||
| 477 | Ga0466962_0028441 | |||
| 478 | 2579855248 | |||
| 479 | 2619855183 | |||
| 480 | 2620351418 | |||
| 481 | 2676198302 | |||
| 482 | 2676492943 | |||
| 483 | 2689961166 | |||
| 484 | 2774383549 | |||
| 485 | 2774842880 | |||
| 486 | 2784590014 | |||
| 487 | 2804845187 | |||
| 488 | 2873316775 | |||
| 489 | 2877679480 | |||
| 490 | 2884702989 | |||
| 491 | 2895429563 | |||
| 492 | 2895443829 | |||
| 493 | 2977251949 | |||
| 494 | 3006429605 | |||
| 495 | 8025415408 | |||
| 496 | 8048135263 | |||
| 497 | 8055068845 | |||
| 498 | 8055158753 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4wou-assembly1.cif.gz_A | crystal structure of mtb pepck in complex with gdp and metals | 0.9337 | 9 | 573 |
| 5i67-assembly1.cif.gz_A | crystal structure analysis of mtb pepck mutant c273s | 0.9222 | 7 | 573 |
| 4wpt-assembly1.cif.gz_A | crystal structure of mtb pepck in complex with pep | 0.9207 | 8 | 573 |
| 4wl8-assembly1.cif.gz_A | crystal structure of mtb pepck in complex with non-hydrolyzable analog of gtp | 0.92 | 8 | 573 |
| 4rcg-assembly1.cif.gz_A | crystal structure analysis of mtb pepck without mn+2 | 0.9188 | 7 | 573 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2zciA01 | Alpha Beta;3-Layer(aba) Sandwich;Phosphoenolpyruvate Carboxykinase; domain 1;Phosphoenolpyruvate Carboxykinase, domain 1 | 0.9647 | 9 | 242 | 3.40.449.10 |
| 2zciA01 | Alpha Beta;3-Layer(aba) Sandwich;Phosphoenolpyruvate Carboxykinase; domain 1;Phosphoenolpyruvate Carboxykinase, domain 1 | 0.9602 | 9 | 242 | 3.40.449.10 |
| af_P9WIH3_4_244_1.10.287.1260 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.944 | 1 | 242 | 1.10.287.1260 |
| af_P9WIH3_4_244_1.10.287.1260 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.9402 | 1 | 242 | 1.10.287.1260 |
| 4gmwA03 | Alpha Beta;Alpha-Beta Complex;Phosphoenolpyruvate Carboxykinase; domain 3; | 0.9107 | 243 | 573 | 3.90.228.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7K0PFG7-F1-model_v4 | Phosphoenolpyruvate carboxykinase (GTP) | 0.9784 | 11 | 185 |
GO:0004613
GO:0005525 GO:0005829 GO:0006094 GO:0006107 GO:0016301 GO:0019543 GO:0030145 GO:0033993 GO:0042594 GO:0046327 GO:0071333 |
| AF-A0A838EYB6-F1-model_v4 | Phosphoenolpyruvate carboxykinase (EC 4.1.1.32) | 0.9759 | 7 | 170 |
GO:0004613
GO:0005525 GO:0005829 GO:0006094 GO:0006107 GO:0016301 GO:0019543 GO:0030145 GO:0033993 GO:0042594 GO:0046327 GO:0071333 |
| AF-A0A353V4K0-F1-model_v4 | Phosphoenolpyruvate carboxykinase (EC 4.1.1.32) | 0.9757 | 482 | 559 |
GO:0004613
GO:0005525 GO:0005829 GO:0006094 GO:0006107 GO:0016301 GO:0019543 GO:0030145 GO:0033993 GO:0042594 GO:0046327 GO:0071333 |
| AF-A0A2S8M378-F1-model_v4 | deleted | 0.9744 | 9 | 168 |
|
| AF-A0A7V6IMZ0-F1-model_v4 | Phosphoenolpyruvate carboxykinase (EC 4.1.1.32) | 0.9743 | 11 | 181 |
GO:0004613
GO:0005525 GO:0005829 GO:0006094 GO:0006107 GO:0016301 GO:0019543 GO:0030145 GO:0033993 GO:0042594 GO:0046327 GO:0071333 |