F361202

General Info

Members Datasets Scaffolds Average Seq Length
249 179 498 449

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2909042592|2909045257
Length 502
Sequence VSLEIPAAGAVRGSTFPALFIEDEHIEASMRDEPAAPLLSSTVSTPVAYFLREIWQAVGGDAAHLSHLAIEGTGALPSTFHVTDLAGAAVGAASLAIAELASLQQGKFPAVQVDRRLASFWFLTSLRPQGWSMPPQWDVVAGDYRAADGWIRLHTNAPHHRDAALAVLKTPIDREAVAAAVEQWQAEALETAIVAKNGCAAAMRTLDQWADHAQGRTVNAEPLLHRSSSAGGHRSHVLPLPGRPLQGVRVLDLTRILAGPVATRFLAGFGAEVLRIDPPGWEEPATVPEVVLGKRCARLDLRNSDDLHVLERLLAQADVFVHGYRPDALTRLGLDSARRRQLNPGLIDVCLDAYGWSGPWHGRRGYDSLIQMSTGIAEAGMRAAGRDRPTPLPGQAIDHATGYLLAAAAIRGLVERLQTGRGYEIRGSLARTAHLLVSTRNQVREAEALAPEQPSDWSASIEQTGWGPARRLRPPVAIADIPMRWDLAAPKLGSSAAAWLAG

Samples

Sample ID Description Type Environment
1 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
21 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
22 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
23 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
35 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
39 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
41 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
43 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
44 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
45 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
62 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
67 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
71 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
72 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
73 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
74 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
75 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
76 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
77 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
78 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
81 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
82 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
85 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
86 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
87 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
88 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
89 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
90 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
91 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
94 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
97 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
98 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
99 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
100 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
103 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
104 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
115 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
116 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
120 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
121 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
122 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
123 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
124 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
125 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
126 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
127 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
128 2909042592 Labrys sp. LIt4 Isolate Nodule
129 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
130 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
131 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
132 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
133 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
134 2599185288 Pseudomonas sp. NFACC25 Isolate Rhizoplane
135 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
136 2643221609 Acidovorax sp. Root217 Isolate Unclassified
137 2643221611 Acidovorax sp. Root219 Isolate Unclassified
138 2721755523 Delftia sp. HK171 Isolate Unclassified
139 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
140 2738543012 Acidovorax sp. CF301 Isolate Unclassified
141 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
142 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
143 2816332133 Acidovorax radicis 2721A Isolate Unclassified
144 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
145 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
146 2818991456 Pseudomonas koreensis 3286 Isolate Rhizosphere
147 2831426010 Nostoc sp. 106C Isolate Unclassified
148 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
149 2842832357 Pseudomonas sp. R-72164 Isolate Unclassified
150 2847085930 Erwinia persicina B64 Isolate Bulb
151 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
152 2849660919 Nostoc sp. T09 Isolate Unclassified
153 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
154 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
155 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
156 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
157 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
158 2902330777 Methylobacterium sp. 2A Isolate Unclassified
159 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
160 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
161 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
162 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
163 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
164 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
165 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
166 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
167 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
168 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
169 2919385768 Pseudomonas sp. 2957 Isolate Unclassified
170 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
171 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
172 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
173 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
174 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
175 2998139840 Pseudomonas iranensis SWRI54 Isolate Rhizosphere
176 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
177 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
178 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
179 8056166840 Pseudomonas triticicola SWRI88 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.71
Metatranscriptomes 0
Isolates 21.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0.4
Endosphere 4.02
Nodule 2.41
Rhizoplane 1.61
Rhizosphere 56.63
Stem 0
Stem Tuber 0
Unclassified 1.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000108 3300002704 Bacteria 44079
2 JGI25155J39150_1000126 3300002704 Bacteria 37345
3 JGI25155J39150_1000198 3300002704 Bacteria 25200
4 JGI25156J39149_1000057 3300002705 Bacteria 86392
5 JGI25156J39149_1002477 3300002705 Bacteria 6587
6 JGI25154J39366_1000087 3300002738 Bacteria 86392
7 JGI25154J39366_1000206 3300002738 Bacteria 42302
8 JGI25157J39369_1000156 3300002741 Bacteria 56715
9 rootH2_10001360 3300003320 Bacteria 48496
10 Ga0055532_1000016 3300003758 Bacteria 327509
11 Ga0058692_1000117 3300003856 Bacteria 51880
12 Ga0058692_1000452 3300003856 Bacteria 18538
13 Ga0065704_10008159 3300005289 Bacteria 2156
14 Ga0070670_100000181 3300005331 Bacteria 57536
15 Ga0070668_100000127 3300005347 Bacteria 47273
16 Ga0070667_100000318 3300005367 Bacteria 53641
17 Ga0070665_100001410 3300005548 Bacteria 28253
18 Ga0068855_100000037 3300005563 Bacteria 158161
19 Ga0068856_100020325 3300005614 Bacteria 6450
20 Ga0068864_100000168 3300005618 Bacteria 60403
21 Ga0068863_100000333 3300005841 Bacteria 47923
22 Ga0068860_100001370 3300005843 Bacteria 26465
23 Ga0068862_100000382 3300005844 Bacteria 47835
24 Ga0070717_10019905 3300006028 Bacteria 5270
25 Ga0075436_100034253 3300006914 Bacteria 3502
26 Ga0079104_1000025 3300006946 Bacteria 218785
27 Ga0105251_10004007 3300009011 Bacteria 10406
28 Ga0105251_10007812 3300009011 Bacteria 6515
29 Ga0105250_10000459 3300009092 Bacteria 29275
30 Ga0105250_10001558 3300009092 Bacteria 12319
31 Ga0105240_10000497 3300009093 Bacteria 72381
32 Ga0105240_10001613 3300009093 Bacteria 38233
33 Ga0105240_10023311 3300009093 Bacteria 8190
34 Ga0105240_10047012 3300009093 Bacteria 5463
35 Ga0105237_10007250 3300009545 Bacteria 12162
36 Ga0105238_10009264 3300009551 Bacteria 9853
37 Ga0105238_10013256 3300009551 Bacteria 8317
38 Ga0105249_10000818 3300009553 Bacteria 28052
39 Ga0105239_10000063 3300010375 Bacteria 151845
40 Ga0105239_10048737 3300010375 Bacteria 4645
41 Ga0105246_10002542 3300011119 Bacteria 11029
42 Ga0157373_10047044 3300013100 Bacteria 3078
43 Ga0157371_10020875 3300013102 Bacteria 4817
44 Ga0163162_10295533 3300013306 Bacteria 1752
45 Ga0163162_10322883 3300013306 Bacteria 1676
46 Ga0157372_10238294 3300013307 Bacteria 2111
47 Ga0182006_1000927 3300015261 Bacteria 19566
48 Ga0182007_10021338 3300015262 Bacteria 2301
49 Ga0163161_10017758 3300017792 Bacteria 4985
50 Ga0163161_10058773 3300017792 Bacteria 2795
51 Ga0213872_10015937 3300021361 Unclassified 3491
52 Ga0213872_10050962 3300021361 Unclassified 1879
53 Ga0209435_100016 3300025206 Bacteria 305566
54 Ga0209435_100038 3300025206 Bacteria 120273
55 Ga0209147_100023 3300025229 Bacteria 437803
56 Ga0209437_100166 3300025233 Bacteria 144787
57 Ga0209258_100368 3300025242 Bacteria 59722
58 Ga0209646_1000033 3300025246 Bacteria 369507
59 Ga0209646_1000093 3300025246 Bacteria 183840
60 Ga0209026_1000031 3300025250 Bacteria 325747
61 Ga0209759_1000045 3300025256 Bacteria 235654
62 Ga0209759_1000248 3300025256 Bacteria 80537
63 Ga0209759_1004309 3300025256 Bacteria 5352
64 Ga0209676_1001133 3300025292 Bacteria 29195
65 Ga0207696_1000246 3300025711 Bacteria 73989
66 Ga0207713_1000426 3300025735 Bacteria 44662
67 Ga0207695_10000633 3300025913 Bacteria 70372
68 Ga0207695_10001904 3300025913 Bacteria 32555
69 Ga0207695_10003480 3300025913 Bacteria 22153
70 Ga0207695_10005294 3300025913 Bacteria 17197
71 Ga0207695_10027900 3300025913 Bacteria 6275
72 Ga0207671_10008735 3300025914 Bacteria 8538
73 Ga0207694_10058419 3300025924 Bacteria 3000
74 Ga0207650_10000201 3300025925 Bacteria 69058
75 Ga0207709_10000170 3300025935 Bacteria 87011
76 Ga0207667_10000053 3300025949 Bacteria 226712
77 Ga0207712_10000948 3300025961 Bacteria 20916
78 Ga0207668_10000247 3300025972 Bacteria 36155
79 Ga0207658_10000052 3300025986 Bacteria 128748
80 Ga0207702_10054798 3300026078 Bacteria 3380
81 Ga0207641_10006142 3300026088 Bacteria 10162
82 Ga0207676_10005159 3300026095 Bacteria 9245
83 Ga0207698_10015736 3300026142 Bacteria 5078
84 Ga0209281_1000007 3300027111 Bacteria 938265
85 Ga0209281_1007962 3300027111 Bacteria 2609
86 Ga0209371_1000122 3300027312 Bacteria 132545
87 Ga0209371_1010742 3300027312 Bacteria 2783
88 Ga0268266_10003717 3300028379 Bacteria 15015
89 Ga0268265_10004166 3300028380 Bacteria 10131
90 Ga0268264_10000684 3300028381 Bacteria 39491
91 Ga0268256_1000048 3300030500 Bacteria 312298
92 Ga0268256_1011564 3300030500 Bacteria 2783
93 Ga0307405_10008531 3300031731 Bacteria 5203
94 Ga0307414_10092020 3300032004 Bacteria 2256
95 Ga0307411_10018681 3300032005 Bacteria 3984
96 Ga0400483_261812 3300039062 Bacteria 1557
97 Ga0436361_0433365 3300039447 Unclassified 3241
98 Ga0436361_0870387 3300039447 Bacteria 7474
99 Ga0439438_002171 3300041405 Bacteria 8456
100 Ga0439447_002919 3300041407 Bacteria 6121
101 Ga0439445_0020639 3300042004 Bacteria 1650
102 Ga0439456_000071 3300042013 Bacteria 36014
103 Ga0450894_003660 3300042131 Bacteria 2008
104 Ga0466977_0000184 3300044666 Bacteria 16121
105 Ga0466959_0118750 3300045049 Bacteria 1881
106 Ga0466967_0049256 3300045976 Bacteria 3683
107 Ga0495617_015303 3300046452 Bacteria 2600
108 Ga0495627_003608 3300046453 Bacteria 6736
109 Ga0495627_029305 3300046453 Bacteria 1752
110 Ga0495591_000075 3300046458 Bacteria 112616
111 Ga0495591_003835 3300046458 Bacteria 7603
112 Ga0495591_004598 3300046458 Bacteria 6663
113 Ga0495650_0000031 3300046471 Bacteria 433811
114 Ga0495605_0030284 3300046474 Bacteria 2776
115 Ga0495584_0019250 3300046491 Bacteria 3467
116 Ga0495584_0036942 3300046491 Bacteria 2467
117 Ga0495607_0002714 3300046501 Bacteria 14118
118 Ga0495607_0065753 3300046501 Bacteria 2043
119 Ga0495606_0000784 3300046507 Bacteria 48577
120 Ga0495606_0010270 3300046507 Bacteria 7796
121 Ga0495620_0008250 3300046515 Bacteria 5601
122 Ga0495630_0042078 3300046517 Bacteria 3412
123 Ga0495632_0014896 3300046519 Bacteria 4381
124 Ga0495632_0021481 3300046519 Bacteria 3477
125 Ga0495648_0002043 3300046524 Bacteria 19147
126 Ga0495648_0019472 3300046524 Bacteria 4771
127 Ga0495652_0147625 3300046529 Bacteria 1841
128 Ga0495654_0000019 3300046530 Bacteria 289483
129 Ga0495654_0004515 3300046530 Bacteria 8237
130 Ga0495609_0015944 3300046538 Bacteria 3507
131 Ga0495625_0003605 3300046660 Bacteria 15212
132 Ga0495625_0097257 3300046660 Bacteria 2026
133 Ga0495661_0004628 3300046665 Bacteria 9899
134 Ga0495671_0006620 3300046692 Bacteria 6680
135 Ga0495589_0005288 3300046794 Bacteria 6821
136 Ga0495589_0055579 3300046794 Bacteria 1950
137 Ga0495660_0000344 3300046810 Bacteria 41225
138 Ga0495660_0022386 3300046810 Bacteria 3608
139 Ga0495672_0000001 3300047320 Bacteria 1458820
140 Ga0495672_0050611 3300047320 Bacteria 2450
141 Ga0495680_0024779 3300047322 Bacteria 4971
142 Ga0495679_013528 3300047446 Bacteria 3058
143 Ga0495679_017128 3300047446 Bacteria 2602
144 Ga0495673_0000131 3300047469 Bacteria 138169
145 Ga0495673_0019397 3300047469 Bacteria 3407
146 Ga0495681_0013301 3300047470 Bacteria 4784
147 Ga0495681_0025062 3300047470 Bacteria 3126
148 Ga0495593_0037758 3300047673 Bacteria 2611
149 Ga0496105_0061403 3300048908 Bacteria 3101
150 Ga0496106_0069891 3300048909 Bacteria 2681
151 Ga0496116_0000250 3300048919 Bacteria 96353
152 Ga0496116_0002478 3300048919 Bacteria 19342
153 Ga0496117_0008920 3300048920 Bacteria 9444
154 Ga0496117_0018404 3300048920 Bacteria 5785
155 Ga0496117_0095854 3300048920 Bacteria 1894
156 Ga0496118_0001935 3300048921 Bacteria 29331
157 Ga0496118_0005687 3300048921 Bacteria 14045
158 Ga0496118_0029561 3300048921 Bacteria 4592
159 Ga0496118_0047096 3300048921 Bacteria 3347
160 Ga0496118_0072284 3300048921 Bacteria 2478
161 Ga0496119_0000093 3300048922 Bacteria 130450
162 Ga0496119_0000845 3300048922 Bacteria 40440
163 Ga0496119_0001363 3300048922 Bacteria 29819
164 Ga0496119_0019026 3300048922 Bacteria 5080
165 Ga0496119_0048155 3300048922 Bacteria 2646
166 Ga0496120_0000002 3300048923 Bacteria 547999
167 Ga0496120_0000170 3300048923 Bacteria 110378
168 Ga0496120_0000210 3300048923 Bacteria 100008
169 Ga0496120_0000578 3300048923 Bacteria 55746
170 Ga0496120_0009762 3300048923 Bacteria 6770
171 Ga0496121_0015507 3300048924 Bacteria 7977
172 Ga0496121_0021865 3300048924 Bacteria 6244
173 Ga0496121_0029335 3300048924 Bacteria 5091
174 Ga0496121_0138349 3300048924 Bacteria 1810
175 Ga0496122_0000375 3300048925 Bacteria 95681
176 Ga0496123_0000267 3300048926 Bacteria 104282
177 Ga0496123_0068277 3300048926 Bacteria 2240
178 Ga0496124_0000383 3300048927 Bacteria 80834
179 Ga0496124_0009488 3300048927 Bacteria 10016
180 Ga0496125_0000694 3300048928 Bacteria 55573
181 Ga0496125_0005264 3300048928 Bacteria 14485
182 Ga0496125_0024649 3300048928 Bacteria 5526
183 Ga0496125_0067352 3300048928 Bacteria 2822
184 Ga0496126_0003093 3300048929 Bacteria 21518
185 Ga0496126_0033065 3300048929 Bacteria 4867
186 Ga0496126_0052571 3300048929 Bacteria 3701
187 Ga0496126_0070746 3300048929 Bacteria 3107
188 Ga0495678_000221 3300049459 Bacteria 66024
189 Ga0495682_0000001 3300049460 Bacteria 1559116
190 Ga0501241_000649 3300049758 Bacteria 7473
191 nmdc:mga08x19_75738_c1 3300050514 Bacteria 2201
192 Ga0500635_0025056 3300053080 Bacteria 1877
193 Ga0500618_005493 3300053125 Bacteria 3844
194 Ga0500621_000002 3300053126 Bacteria 849473
195 Ga0500573_0060103 3300053140 Bacteria 2177
196 Ga0500634_0080952 3300053161 Bacteria 1674
197 2909045257 2909042592 Bacteria 6499737
198 2511248934 2511231003 Bacteria 5606035
199 2511436603 2511231035 Bacteria 5341610
200 2521558457 2521172590 Bacteria 5047645
201 2553007837 2551306416 Bacteria 6152985
202 2596374810 2595698237 Bacteria 6712432
203 2599882040 2599185288 Bacteria 6666191
204 2599950063 2599185303 Bacteria 6512725
205 2644062523 2643221609 Bacteria 6756331
206 2644076446 2643221611 Bacteria 6820941
207 2722882597 2721755523 Bacteria 6430384
208 2738688315 2738541271 Bacteria 5657310
209 2739245373 2738543012 Bacteria 7115078
210 2739264046 2738543016 Bacteria 5657564
211 2765569564 2765235838 Bacteria 5445269
212 2816474738 2816332133 Bacteria 7249298
213 2819591396 2818991445 Bacteria 4955017
214 2819614309 2818991449 Bacteria 5518009
215 2819656030 2818991456 Bacteria 6123676
216 2831426843 2831426010 Bacteria 8662725
217 2839095554 2839094727 Bacteria 5534556
218 2842837210 2842832357 Bacteria 5959113
219 2847087236 2847085930 Bacteria 5070450
220 2848697147 2848694841 Bacteria 9205737
221 2849663334 2849660919 Bacteria 8251853
222 2883581243 2883577096 Bacteria 4709178
223 2884837200 2884836552 Bacteria 5219991
224 2884853491 2884852848 Bacteria 5221161
225 2885415031 2885409591 Bacteria 9235467
226 2885416001 2885409591 Bacteria 9235467
227 2896155392 2896154374 Bacteria 5221518
228 2902336375 2902330777 Bacteria 6395352
229 2902408590 2902405164 Bacteria 6784948
230 2904445002 2904439833 Bacteria 5931679
231 2904534164 2904530477 Bacteria 5876334
232 2904588994 2904584206 Bacteria 6028872
233 2904590525 2904589729 Bacteria 6113573
234 2904603603 2904601388 Bacteria 5884906
235 2908673970 2908669403 Bacteria 5740494
236 2912964817 2912963787 Bacteria 5646108
237 2919046887 2919046199 Bacteria 5567169
238 2919080386 2919079590 Bacteria 5946433
239 2919388356 2919385768 Bacteria 5897293
240 2928125520 2928125067 Bacteria 5937560
241 2928133381 2928130867 Bacteria 5467269
242 2939603574 2939602548 Bacteria 4950493
243 2945965555 2945961074 Bacteria 7342064
244 2974289570 2974289157 Bacteria 6080362
245 2998144345 2998139840 Bacteria 6073514
246 3007865800 3007861166 Bacteria 6045338
247 8018846692 8018845410 Bacteria 8933938
248 8055036488 8055034563 Bacteria 3562128
249 8056166917 8056166840 Bacteria 5820959
250 JGI25155J39150_1000108
251 JGI25155J39150_1000126
252 JGI25155J39150_1000198
253 JGI25156J39149_1000057
254 JGI25156J39149_1002477
255 JGI25154J39366_1000087
256 JGI25154J39366_1000206
257 JGI25157J39369_1000156
258 rootH2_10001360
259 Ga0055532_1000016
260 Ga0058692_1000117
261 Ga0058692_1000452
262 Ga0065704_10008159
263 Ga0070670_100000181
264 Ga0070668_100000127
265 Ga0070667_100000318
266 Ga0070665_100001410
267 Ga0068855_100000037
268 Ga0068856_100020325
269 Ga0068864_100000168
270 Ga0068863_100000333
271 Ga0068860_100001370
272 Ga0068862_100000382
273 Ga0070717_10019905
274 Ga0075436_100034253
275 Ga0079104_1000025
276 Ga0105251_10004007
277 Ga0105251_10007812
278 Ga0105250_10000459
279 Ga0105250_10001558
280 Ga0105240_10000497
281 Ga0105240_10001613
282 Ga0105240_10023311
283 Ga0105240_10047012
284 Ga0105237_10007250
285 Ga0105238_10009264
286 Ga0105238_10013256
287 Ga0105249_10000818
288 Ga0105239_10000063
289 Ga0105239_10048737
290 Ga0105246_10002542
291 Ga0157373_10047044
292 Ga0157371_10020875
293 Ga0163162_10295533
294 Ga0163162_10322883
295 Ga0157372_10238294
296 Ga0182006_1000927
297 Ga0182007_10021338
298 Ga0163161_10017758
299 Ga0163161_10058773
300 Ga0213872_10015937
301 Ga0213872_10050962
302 Ga0209435_100016
303 Ga0209435_100038
304 Ga0209147_100023
305 Ga0209437_100166
306 Ga0209258_100368
307 Ga0209646_1000033
308 Ga0209646_1000093
309 Ga0209026_1000031
310 Ga0209759_1000045
311 Ga0209759_1000248
312 Ga0209759_1004309
313 Ga0209676_1001133
314 Ga0207696_1000246
315 Ga0207713_1000426
316 Ga0207695_10000633
317 Ga0207695_10001904
318 Ga0207695_10003480
319 Ga0207695_10005294
320 Ga0207695_10027900
321 Ga0207671_10008735
322 Ga0207694_10058419
323 Ga0207650_10000201
324 Ga0207709_10000170
325 Ga0207667_10000053
326 Ga0207712_10000948
327 Ga0207668_10000247
328 Ga0207658_10000052
329 Ga0207702_10054798
330 Ga0207641_10006142
331 Ga0207676_10005159
332 Ga0207698_10015736
333 Ga0209281_1000007
334 Ga0209281_1007962
335 Ga0209371_1000122
336 Ga0209371_1010742
337 Ga0268266_10003717
338 Ga0268265_10004166
339 Ga0268264_10000684
340 Ga0268256_1000048
341 Ga0268256_1011564
342 Ga0307405_10008531
343 Ga0307414_10092020
344 Ga0307411_10018681
345 Ga0400483_261812
346 Ga0436361_0433365
347 Ga0436361_0870387
348 Ga0439438_002171
349 Ga0439447_002919
350 Ga0439445_0020639
351 Ga0439456_000071
352 Ga0450894_003660
353 Ga0466977_0000184
354 Ga0466959_0118750
355 Ga0466967_0049256
356 Ga0495617_015303
357 Ga0495627_003608
358 Ga0495627_029305
359 Ga0495591_000075
360 Ga0495591_003835
361 Ga0495591_004598
362 Ga0495650_0000031
363 Ga0495605_0030284
364 Ga0495584_0019250
365 Ga0495584_0036942
366 Ga0495607_0002714
367 Ga0495607_0065753
368 Ga0495606_0000784
369 Ga0495606_0010270
370 Ga0495620_0008250
371 Ga0495630_0042078
372 Ga0495632_0014896
373 Ga0495632_0021481
374 Ga0495648_0002043
375 Ga0495648_0019472
376 Ga0495652_0147625
377 Ga0495654_0000019
378 Ga0495654_0004515
379 Ga0495609_0015944
380 Ga0495625_0003605
381 Ga0495625_0097257
382 Ga0495661_0004628
383 Ga0495671_0006620
384 Ga0495589_0005288
385 Ga0495589_0055579
386 Ga0495660_0000344
387 Ga0495660_0022386
388 Ga0495672_0000001
389 Ga0495672_0050611
390 Ga0495680_0024779
391 Ga0495679_013528
392 Ga0495679_017128
393 Ga0495673_0000131
394 Ga0495673_0019397
395 Ga0495681_0013301
396 Ga0495681_0025062
397 Ga0495593_0037758
398 Ga0496105_0061403
399 Ga0496106_0069891
400 Ga0496116_0000250
401 Ga0496116_0002478
402 Ga0496117_0008920
403 Ga0496117_0018404
404 Ga0496117_0095854
405 Ga0496118_0001935
406 Ga0496118_0005687
407 Ga0496118_0029561
408 Ga0496118_0047096
409 Ga0496118_0072284
410 Ga0496119_0000093
411 Ga0496119_0000845
412 Ga0496119_0001363
413 Ga0496119_0019026
414 Ga0496119_0048155
415 Ga0496120_0000002
416 Ga0496120_0000170
417 Ga0496120_0000210
418 Ga0496120_0000578
419 Ga0496120_0009762
420 Ga0496121_0015507
421 Ga0496121_0021865
422 Ga0496121_0029335
423 Ga0496121_0138349
424 Ga0496122_0000375
425 Ga0496123_0000267
426 Ga0496123_0068277
427 Ga0496124_0000383
428 Ga0496124_0009488
429 Ga0496125_0000694
430 Ga0496125_0005264
431 Ga0496125_0024649
432 Ga0496125_0067352
433 Ga0496126_0003093
434 Ga0496126_0033065
435 Ga0496126_0052571
436 Ga0496126_0070746
437 Ga0495678_000221
438 Ga0495682_0000001
439 Ga0501241_000649
440 nmdc:mga08x19_75738_c1
441 Ga0500635_0025056
442 Ga0500618_005493
443 Ga0500621_000002
444 Ga0500573_0060103
445 Ga0500634_0080952
446 2909045257
447 2511248934
448 2511436603
449 2521558457
450 2553007837
451 2596374810
452 2599882040
453 2599950063
454 2644062523
455 2644076446
456 2722882597
457 2738688315
458 2739245373
459 2739264046
460 2765569564
461 2816474738
462 2819591396
463 2819614309
464 2819656030
465 2831426843
466 2839095554
467 2842837210
468 2847087236
469 2848697147
470 2849663334
471 2883581243
472 2884837200
473 2884853491
474 2885415031
475 2885416001
476 2896155392
477 2902336375
478 2902408590
479 2904445002
480 2904534164
481 2904588994
482 2904590525
483 2904603603
484 2908673970
485 2912964817
486 2919046887
487 2919080386
488 2919388356
489 2928125520
490 2928133381
491 2939603574
492 2945965555
493 2974289570
494 2998144345
495 3007865800
496 8018846692
497 8055036488
498 8056166917

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

245

464

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nak-assembly1.cif.gz_B pseudomonas fluorescens kynurenine 3-monooxygenase (kmo) in complex with the enzyme substrate l-kynurenine 0.8801 210 239
5yx6-assembly2.cif.gz_D crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.8779 203 391
7z94-assembly1.cif.gz_A crystal structure of variovorax paradoxus indole monooxygenase (vpinda1) in complex with indole 0.8767 211 240
4bk2-assembly1.cif.gz_A-2 crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: q301e mutant 0.8765 208 240
4bjz-assembly1.cif.gz_A crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: native data 0.8758 208 240
ID Description Score Start End Superfamily
af_Q5AMS5_241_485_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.8854 205 392 3.40.50.10540
3gmbB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8625 211 240 3.50.50.60
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.8498 229 392 3.40.50.10540
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.848 211 240 3.50.50.60
3ubmA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.8458 207 391 3.40.50.10540
ID Description Score Start End GO Terms
AF-A0A4S3LSW4-F1-model_v4 Acyl-CoA transferase 0.9729 6 366 GO:0016740
AF-A0A7Y8BCC9-F1-model_v4 deleted 0.9672 112 443
AF-A0A6J5E5I0-F1-model_v4 Formyl-CoA:oxalate CoA-transferase (EC 2.8.3.16) (L-carnitine dehydratase/bile acid-inducible protein F) 0.966 1 443 GO:0033608
AF-A0A0J6SM67-F1-model_v4 CAIB/BAIF family CoA transferase 0.9659 14 391 GO:0016740
AF-A0A4S3LSW4-F1-model_v4 Acyl-CoA transferase 0.965 6 366 GO:0016740

Map