F362035

General Info

Members Datasets Scaffolds Average Seq Length
250 172 500 996

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2929177148|2929182001
Length 1040
Sequence RYAVKNYQFTLVIFIMIIVLGITTILNMPRSEDPELRSPQFNIVVVYPGTSPKDMEDLVVDPMEKEIYGLDDMKRVRTSISDGVAVMHVEYKYSSNVDQKYQELVREVNNKRQELPADIYSIEVQKQEPSDVNILQIALISENTSRDKLRYYADKLQDELEKVPSLKNVKLHGLPEQQVRVELQLDKMAQLHLPVNTVMAAMQSEMANIPGGSIDAGDKSFNIKTSGNYQHLDEISNTIVSAGNGKNVFLKDIARVYYGFEDEKYFVRLNGHRCVVVSAAQKSGENITKTQIAYKPVIEKFKKTLPANIDMVQYFDQADAVNSRLSGLGKDFIIAILLVAFTLLPLGQRPALIVMISIPLSLSIGIVLLQLFGYSLNQLSIVGLVVALGLLVDDSIVVVENIERWMLEGHSRMDATLKATSQIGLAVIGCTAALVISFMPLVFMPEGSGDFIRSLPLAVIFSVLASMAVSLTIIPFLSSRLLKEHTGNPEGNLFMRLLKKLIHGSYAKLLDKALHRPVITIVVSLVIFGASIGLFKVIGFSLFPASEKPQFLINIFAPPQSNLHYTNSIVQQIEKELKQEKMVSSYASNIGKGNPRIYYNELQENEKSDYAQLFVQLAPHTSPADKNKLIESLRKKWTPYPGAKVEVKNFEQGPPMVAPVEVRLFGDNLDTLRSLAGNVEKMLEKTQGTIYINNPVSNLKSDIRVRIDREKAQQLGIPTANIDRVVRLAVAGINLGQYNDQNDNDYDILLTKQKTAQPTLDVFRDLYVNNSQGTAIPLSQVAQLQLETSPLTIKHQEKNRVVAVSAFIKKGFLTDRVIEDVVKQMDALKLPAGYTYEMGGEVESRKNSFGGFMSVIIVTIFLFVAVLILQFKTFKSMLIVLSVIPLGIVGAAMGLWLTGNSLSFVAIIGLIALAGIEVKNTILLVDFTNQLRMQGKPLEAAIREAGEVRFLPIVLTSLTAIGGLIPVAISTNPLIAPLAIVLIGGLISSTLLSRIVTPVVYKLIPPRIEAINNNGHSSQKRQDLEEEEVILAPHAIIHNS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
22 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
66 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
67 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
100 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
101 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
102 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
103 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
118 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
140 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
141 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
142 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
143 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
144 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
147 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
148 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
149 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
150 2738541278 Niastella sp. CF465 Isolate Unclassified
151 2738541283 Pedobacter sp. OK701 Isolate Unclassified
152 2738541284 Pedobacter sp. YR016 Isolate Unclassified
153 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
154 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
155 2818991444 Filimonas endophytica 3197 Isolate Unclassified
156 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
157 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
158 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
159 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
160 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
161 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
162 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
163 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
164 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
165 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
166 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
167 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
168 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
169 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
170 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
171 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
172 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90
Metatranscriptomes 0
Isolates 10

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.6
Nodule 0
Rhizoplane 0.4
Rhizosphere 60
Stem 0
Stem Tuber 0
Unclassified 1.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_38688 2162886007 Bacteria 22286
2 JGI24740J21852_10000062 3300001979 Bacteria 34499
3 JGI24739J22299_10000801 3300001989 Bacteria 11491
4 JGI24739J22299_10004049 3300001989 Bacteria 5605
5 JGI25162J39368_1000012 3300002737 Bacteria 373191
6 JGI25154J39366_1000012 3300002738 Bacteria 287601
7 JGI25153J46596_10005334 3300003215 Bacteria 6756
8 rootH1_10003105 3300003316 Bacteria 34721
9 rootH2_10002144 3300003320 Bacteria 13466
10 rootH2_10009982 3300003320 Bacteria 25986
11 rootL2_10011933 3300003322 Bacteria 7621
12 rootL2_10015074 3300003322 Bacteria 8627
13 rootL2_10019504 3300003322 Bacteria 8382
14 rootL2_10065053 3300003322 Bacteria 13632
15 rootL2_10067854 3300003322 Bacteria 6707
16 rootH1_10008582 3300003323 Bacteria 172664
17 rootH1_10035449 3300003323 Bacteria 8704
18 rootH1_10052920 3300003323 Bacteria 18808
19 rootH1_10074639 3300003323 Bacteria 8131
20 rootH1_10098969 3300003323 Bacteria 10813
21 rootH1_10104517 3300003323 Bacteria 3202
22 rootH1_10218808 3300003323 Bacteria 4475
23 JGI25160J50197_1000663 3300003354 Bacteria 19192
24 Ga0055526_1005596 3300003771 Bacteria 7158
25 Ga0055536_1000004 3300003781 Bacteria 411108
26 Ga0055528_1000283 3300003790 Bacteria 43334
27 Ga0055528_1000694 3300003790 Bacteria 23961
28 Ga0055530_10003033 3300003791 Bacteria 10041
29 Ga0055530_10003568 3300003791 Bacteria 8747
30 Ga0055531_10000144 3300003794 Bacteria 82231
31 Ga0055531_10000418 3300003794 Bacteria 40440
32 Ga0065165_1000017 3300005262 Bacteria 278286
33 Ga0065165_1000159 3300005262 Bacteria 116983
34 Ga0065165_1001561 3300005262 Bacteria 23761
35 Ga0065165_1009826 3300005262 Bacteria 4225
36 Ga0065714_10002525 3300005288 Bacteria 27682
37 Ga0065714_10005797 3300005288 Bacteria 7266
38 Ga0065714_10007115 3300005288 Bacteria 5372
39 Ga0065714_10064483 3300005288 Bacteria 53492
40 Ga0065704_10000217 3300005289 Bacteria 101781
41 Ga0065704_10000301 3300005289 Bacteria 42046
42 Ga0070658_10001089 3300005327 Bacteria 23167
43 Ga0070676_10003897 3300005328 Bacteria 7830
44 Ga0070666_10010430 3300005335 Bacteria 5813
45 Ga0068868_100002424 3300005338 Bacteria 12922
46 Ga0070668_100000466 3300005347 Bacteria 26777
47 Ga0070668_100010487 3300005347 Bacteria 6888
48 Ga0070673_100000271 3300005364 Bacteria 26588
49 Ga0070667_100001481 3300005367 Bacteria 21046
50 Ga0070662_100001316 3300005457 Bacteria 15273
51 Ga0070672_100000102 3300005543 Bacteria 42541
52 Ga0070665_100001243 3300005548 Bacteria 30849
53 Ga0068857_100012331 3300005577 Bacteria 7439
54 Ga0068859_100001126 3300005617 Bacteria 27328
55 Ga0068864_100003030 3300005618 Bacteria 13887
56 Ga0068851_10000104 3300005834 Bacteria 45630
57 Ga0068863_100001029 3300005841 Bacteria 27853
58 Ga0068863_100048065 3300005841 Bacteria 4046
59 Ga0068858_100002267 3300005842 Bacteria 19447
60 Ga0068860_100010484 3300005843 Bacteria 9160
61 Ga0081539_10006249 3300005985 Bacteria 11535
62 Ga0068871_100000139 3300006358 Bacteria 46889
63 Ga0068871_100001115 3300006358 Bacteria 18018
64 Ga0097620_100001126 3300006931 Bacteria 27328
65 Ga0105240_10001675 3300009093 Bacteria 37595
66 Ga0105240_10017957 3300009093 Bacteria 9515
67 Ga0111539_10028105 3300009094 Bacteria 6867
68 Ga0105241_10000476 3300009174 Bacteria 30222
69 Ga0105241_10047149 3300009174 Bacteria 3276
70 Ga0105248_10050557 3300009177 Unclassified 4662
71 Ga0105237_10003431 3300009545 Bacteria 18829
72 Ga0105237_10008509 3300009545 Bacteria 11097
73 Ga0105237_10019045 3300009545 Bacteria 7096
74 Ga0105239_10000163 3300010375 Bacteria 95477
75 Ga0105239_10003358 3300010375 Bacteria 19664
76 Ga0105239_10004363 3300010375 Bacteria 16950
77 Ga0105239_10004497 3300010375 Bacteria 16641
78 Ga0105246_10005583 3300011119 Bacteria 7672
79 Ga0157373_10001684 3300013100 Bacteria 16873
80 Ga0157373_10003077 3300013100 Bacteria 12597
81 Ga0157373_10010743 3300013100 Bacteria 6737
82 Ga0157371_10001041 3300013102 Bacteria 30406
83 Ga0157371_10004524 3300013102 Bacteria 12113
84 Ga0157371_10027406 3300013102 Bacteria 4133
85 Ga0157370_10003002 3300013104 Bacteria 20024
86 Ga0157374_10000456 3300013296 Bacteria 37266
87 Ga0157378_10001590 3300013297 Bacteria 20538
88 Ga0163162_10000669 3300013306 Bacteria 31795
89 Ga0157372_10062764 3300013307 Unclassified 4164
90 Ga0157375_10005899 3300013308 Bacteria 10674
91 Ga0163163_10000493 3300014325 Bacteria 35594
92 Ga0157380_10003134 3300014326 Bacteria 11278
93 Ga0182008_10000108 3300014497 Bacteria 63463
94 Ga0157379_10000255 3300014968 Bacteria 41772
95 Ga0157376_10014356 3300014969 Bacteria 5943
96 Ga0182005_1000141 3300015265 Bacteria 50863
97 Ga0182005_1000192 3300015265 Bacteria 41558
98 Ga0163161_10000012 3300017792 Bacteria 264639
99 Ga0163161_10000120 3300017792 Bacteria 73632
100 Ga0209436_100280 3300025208 Bacteria 23454
101 Ga0209437_100041 3300025233 Bacteria 444465
102 Ga0209258_100081 3300025242 Bacteria 254564
103 Ga0209258_100354 3300025242 Bacteria 63709
104 Ga0209646_1000009 3300025246 Bacteria 652154
105 Ga0209026_1000197 3300025250 Bacteria 84123
106 Ga0209148_1000276 3300025254 Bacteria 80610
107 Ga0209148_1000336 3300025254 Bacteria 63669
108 Ga0209673_1000016 3300025273 Bacteria 506202
109 Ga0209673_1000083 3300025273 Bacteria 216509
110 Ga0209130_1002269 3300025284 Bacteria 9922
111 Ga0209676_1000009 3300025292 Bacteria 981719
112 Ga0209564_1002759 3300025295 Bacteria 13199
113 Ga0209758_1001318 3300025297 Bacteria 30178
114 Ga0209758_1003125 3300025297 Bacteria 15630
115 Ga0209758_1003979 3300025297 Bacteria 12792
116 Ga0209050_1000048 3300025298 Bacteria 371553
117 Ga0209050_1000273 3300025298 Bacteria 110451
118 Ga0209050_1004730 3300025298 Bacteria 9007
119 Ga0207426_1000009 3300025302 Bacteria 797229
120 Ga0207426_1000154 3300025302 Bacteria 179701
121 Ga0207426_1000501 3300025302 Bacteria 58054
122 Ga0207426_1001089 3300025302 Bacteria 25231
123 Ga0207426_1003434 3300025302 Bacteria 8613
124 Ga0209257_1000007 3300025304 Bacteria 1564415
125 Ga0209257_1000064 3300025304 Bacteria 356803
126 Ga0209257_1004649 3300025304 Bacteria 10370
127 Ga0207656_10000494 3300025321 Bacteria 13043
128 Ga0207656_10000663 3300025321 Bacteria 11275
129 Ga0207680_10006200 3300025903 Bacteria 5767
130 Ga0207645_10000219 3300025907 Bacteria 47364
131 Ga0207645_10005725 3300025907 Bacteria 8967
132 Ga0207643_10002889 3300025908 Bacteria 9275
133 Ga0207705_10004154 3300025909 Bacteria 10984
134 Ga0207671_10002434 3300025914 Bacteria 19923
135 Ga0207671_10010210 3300025914 Bacteria 7773
136 Ga0207671_10017013 3300025914 Bacteria 5626
137 Ga0207691_10000145 3300025940 Bacteria 65242
138 Ga0207691_10015498 3300025940 Bacteria 7246
139 Ga0207689_10007735 3300025942 Bacteria 9407
140 Ga0207651_10000509 3300025960 Bacteria 16353
141 Ga0207712_10019444 3300025961 Unclassified 4436
142 Ga0207668_10000328 3300025972 Bacteria 30719
143 Ga0207658_10000431 3300025986 Bacteria 39615
144 Ga0207677_10001428 3300026023 Bacteria 12703
145 Ga0207703_10001721 3300026035 Bacteria 19665
146 Ga0207639_10009453 3300026041 Bacteria 6728
147 Ga0207702_10034317 3300026078 Bacteria 4241
148 Ga0207648_10001733 3300026089 Bacteria 23873
149 Ga0207676_10011281 3300026095 Bacteria 6384
150 Ga0207674_10050277 3300026116 Bacteria 4260
151 Ga0207675_100035874 3300026118 Bacteria 4625
152 Ga0268266_10000714 3300028379 Bacteria 44837
153 Ga0268266_10001404 3300028379 Bacteria 28781
154 Ga0268264_10000015 3300028381 Bacteria 508501
155 Ga0268264_10003907 3300028381 Bacteria 12762
156 Ga0307515_10000007 3300028794 Bacteria 719669
157 Ga0307515_10000193 3300028794 Bacteria 148602
158 Ga0307515_10045893 3300028794 Bacteria 6696
159 Ga0307515_10106999 3300028794 Bacteria 3311
160 Ga0307511_10000228 3300030521 Bacteria 57237
161 Ga0316177_1024827 3300030731 Bacteria 5242
162 Ga0316176_1042412 3300030732 Bacteria 5378
163 Ga0316183_1017569 3300030742 Bacteria 20437
164 Ga0316181_1265153 3300030744 Bacteria 10308
165 Ga0265327_10000022 3300031251 Bacteria 402724
166 Ga0307509_10031939 3300031507 Bacteria 5806
167 Ga0307412_10000030 3300031911 Bacteria 208541
168 Ga0307414_10000360 3300032004 Bacteria 25214
169 Ga0307414_10001273 3300032004 Bacteria 13009
170 Ga0451577_0000208 3300042876 Bacteria 122820
171 Ga0451577_0002014 3300042876 Bacteria 25250
172 Ga0466969_0000004 3300044656 Bacteria 168068
173 Ga0466972_0000002 3300044658 Bacteria 408005
174 Ga0466972_0000017 3300044658 Bacteria 199884
175 Ga0466966_0000295 3300044684 Bacteria 32723
176 Ga0453684_0000668 3300044712 Bacteria 122805
177 Ga0453684_0004066 3300044712 Bacteria 31787
178 Ga0453684_0020005 3300044712 Bacteria 10141
179 Ga0453684_0031124 3300044712 Bacteria 7510
180 Ga0453684_0055200 3300044712 Bacteria 5166
181 Ga0466970_0000857 3300044765 Bacteria 14667
182 Ga0466957_0001466 3300044842 Bacteria 12365
183 Ga0466959_0000004 3300045049 Bacteria 216815
184 Ga0451576_0000291 3300045051 Bacteria 122805
185 Ga0451576_0001369 3300045051 Bacteria 41890
186 Ga0495638_0000005 3300046460 Bacteria 680627
187 Ga0495650_0000014 3300046471 Bacteria 581606
188 Ga0495606_0000096 3300046507 Bacteria 151500
189 Ga0495616_0001231 3300046513 Bacteria 18003
190 Ga0495633_0000330 3300046558 Bacteria 53493
191 Ga0495633_0000485 3300046558 Bacteria 40274
192 Ga0495668_0000235 3300046616 Bacteria 78964
193 Ga0495668_0000489 3300046616 Bacteria 49613
194 Ga0495668_0002808 3300046616 Bacteria 13859
195 Ga0495625_0000003 3300046660 Bacteria 686847
196 Ga0495661_0030591 3300046665 Bacteria 3426
197 Ga0495658_0012905 3300046683 Bacteria 4245
198 Ga0495649_0000002 3300046694 Bacteria 1093458
199 Ga0495660_0004126 3300046810 Bacteria 8850
200 Ga0495687_000004 3300047443 Bacteria 779298
201 Ga0495686_0000128 3300047472 Bacteria 156223
202 Ga0495686_0001835 3300047472 Bacteria 21351
203 Ga0496115_0023011 3300048918 Bacteria 4833
204 Ga0496121_0000011 3300048924 Bacteria 792193
205 Ga0496122_0006554 3300048925 Bacteria 13310
206 Ga0496123_0018014 3300048926 Bacteria 5649
207 Ga0496126_0046382 3300048929 Bacteria 3986
208 Ga0501300_001928 3300049523 Bacteria 3103
209 Ga0501047_0038833 3300049581 Bacteria 4605
210 Ga0501225_0003533 3300049705 Bacteria 4712
211 nmdc:mga05p37_12156_c1 3300050507 Bacteria 10278
212 Ga0500578_0000037 3300053086 Bacteria 134901
213 Ga0500646_0005568 3300053090 Bacteria 3187
214 Ga0500583_0000062 3300053092 Bacteria 67892
215 Ga0500583_0000276 3300053092 Bacteria 17969
216 Ga0500562_000044 3300053108 Bacteria 65482
217 Ga0500577_0000846 3300053142 Bacteria 7916
218 Ga0500604_0006153 3300053151 Bacteria 3170
219 Ga0500616_0000003 3300053153 Bacteria 1220687
220 Ga0500616_0006245 3300053153 Bacteria 7852
221 Ga0500622_0000003 3300053156 Bacteria 613483
222 Ga0500622_0000008 3300053156 Bacteria 423636
223 Ga0500622_0000690 3300053156 Bacteria 29762
224 Ga0500622_0001193 3300053156 Bacteria 21399
225 Ga0500633_0002219 3300053160 Bacteria 3940
226 2929182001 2929177148 Bacteria 7883697
227 2522551204 2522125168 Bacteria 7376607
228 2738724499 2738541278 Bacteria 9755573
229 2738759439 2738541283 Bacteria 7222293
230 2738763548 2738541284 Bacteria 5199923
231 2776615011 2775506987 Bacteria 5373360
232 2819576166 2818991442 Bacteria 8318214
233 2819587200 2818991444 Bacteria 6968812
234 2819678910 2818991460 Bacteria 7595395
235 2821142391 2821136567 Bacteria 8080116
236 2842909606 2842903701 Bacteria 6986368
237 2884792029 2884791551 Bacteria 8511252
238 2890808006 2890804823 Bacteria 3717572
239 2896090012 2896085136 Bacteria 6129793
240 2896110571 2896109856 Bacteria 7140722
241 2902051606 2902048731 Bacteria 4976191
242 2904470442 2904467357 Bacteria 8057758
243 2919696987 2919692658 Bacteria 5943958
244 2929157702 2929154850 Bacteria 6753285
245 2929243529 2929239360 Bacteria 7745570
246 2929924355 2929921140 Bacteria 8649150
247 2945977942 2945977869 Bacteria 7777518
248 2946016206 2946013367 Bacteria 7766675
249 8003156336 8003151029 Bacteria 8187759
250 8055589626 8055588893 Bacteria 3619545
251 SwRhRL2b_contig_38688
252 JGI24740J21852_10000062
253 JGI24739J22299_10000801
254 JGI24739J22299_10004049
255 JGI25162J39368_1000012
256 JGI25154J39366_1000012
257 JGI25153J46596_10005334
258 rootH1_10003105
259 rootH2_10002144
260 rootH2_10009982
261 rootL2_10011933
262 rootL2_10015074
263 rootL2_10019504
264 rootL2_10065053
265 rootL2_10067854
266 rootH1_10008582
267 rootH1_10035449
268 rootH1_10052920
269 rootH1_10074639
270 rootH1_10098969
271 rootH1_10104517
272 rootH1_10218808
273 JGI25160J50197_1000663
274 Ga0055526_1005596
275 Ga0055536_1000004
276 Ga0055528_1000283
277 Ga0055528_1000694
278 Ga0055530_10003033
279 Ga0055530_10003568
280 Ga0055531_10000144
281 Ga0055531_10000418
282 Ga0065165_1000017
283 Ga0065165_1000159
284 Ga0065165_1001561
285 Ga0065165_1009826
286 Ga0065714_10002525
287 Ga0065714_10005797
288 Ga0065714_10007115
289 Ga0065714_10064483
290 Ga0065704_10000217
291 Ga0065704_10000301
292 Ga0070658_10001089
293 Ga0070676_10003897
294 Ga0070666_10010430
295 Ga0068868_100002424
296 Ga0070668_100000466
297 Ga0070668_100010487
298 Ga0070673_100000271
299 Ga0070667_100001481
300 Ga0070662_100001316
301 Ga0070672_100000102
302 Ga0070665_100001243
303 Ga0068857_100012331
304 Ga0068859_100001126
305 Ga0068864_100003030
306 Ga0068851_10000104
307 Ga0068863_100001029
308 Ga0068863_100048065
309 Ga0068858_100002267
310 Ga0068860_100010484
311 Ga0081539_10006249
312 Ga0068871_100000139
313 Ga0068871_100001115
314 Ga0097620_100001126
315 Ga0105240_10001675
316 Ga0105240_10017957
317 Ga0111539_10028105
318 Ga0105241_10000476
319 Ga0105241_10047149
320 Ga0105248_10050557
321 Ga0105237_10003431
322 Ga0105237_10008509
323 Ga0105237_10019045
324 Ga0105239_10000163
325 Ga0105239_10003358
326 Ga0105239_10004363
327 Ga0105239_10004497
328 Ga0105246_10005583
329 Ga0157373_10001684
330 Ga0157373_10003077
331 Ga0157373_10010743
332 Ga0157371_10001041
333 Ga0157371_10004524
334 Ga0157371_10027406
335 Ga0157370_10003002
336 Ga0157374_10000456
337 Ga0157378_10001590
338 Ga0163162_10000669
339 Ga0157372_10062764
340 Ga0157375_10005899
341 Ga0163163_10000493
342 Ga0157380_10003134
343 Ga0182008_10000108
344 Ga0157379_10000255
345 Ga0157376_10014356
346 Ga0182005_1000141
347 Ga0182005_1000192
348 Ga0163161_10000012
349 Ga0163161_10000120
350 Ga0209436_100280
351 Ga0209437_100041
352 Ga0209258_100081
353 Ga0209258_100354
354 Ga0209646_1000009
355 Ga0209026_1000197
356 Ga0209148_1000276
357 Ga0209148_1000336
358 Ga0209673_1000016
359 Ga0209673_1000083
360 Ga0209130_1002269
361 Ga0209676_1000009
362 Ga0209564_1002759
363 Ga0209758_1001318
364 Ga0209758_1003125
365 Ga0209758_1003979
366 Ga0209050_1000048
367 Ga0209050_1000273
368 Ga0209050_1004730
369 Ga0207426_1000009
370 Ga0207426_1000154
371 Ga0207426_1000501
372 Ga0207426_1001089
373 Ga0207426_1003434
374 Ga0209257_1000007
375 Ga0209257_1000064
376 Ga0209257_1004649
377 Ga0207656_10000494
378 Ga0207656_10000663
379 Ga0207680_10006200
380 Ga0207645_10000219
381 Ga0207645_10005725
382 Ga0207643_10002889
383 Ga0207705_10004154
384 Ga0207671_10002434
385 Ga0207671_10010210
386 Ga0207671_10017013
387 Ga0207691_10000145
388 Ga0207691_10015498
389 Ga0207689_10007735
390 Ga0207651_10000509
391 Ga0207712_10019444
392 Ga0207668_10000328
393 Ga0207658_10000431
394 Ga0207677_10001428
395 Ga0207703_10001721
396 Ga0207639_10009453
397 Ga0207702_10034317
398 Ga0207648_10001733
399 Ga0207676_10011281
400 Ga0207674_10050277
401 Ga0207675_100035874
402 Ga0268266_10000714
403 Ga0268266_10001404
404 Ga0268264_10000015
405 Ga0268264_10003907
406 Ga0307515_10000007
407 Ga0307515_10000193
408 Ga0307515_10045893
409 Ga0307515_10106999
410 Ga0307511_10000228
411 Ga0316177_1024827
412 Ga0316176_1042412
413 Ga0316183_1017569
414 Ga0316181_1265153
415 Ga0265327_10000022
416 Ga0307509_10031939
417 Ga0307412_10000030
418 Ga0307414_10000360
419 Ga0307414_10001273
420 Ga0451577_0000208
421 Ga0451577_0002014
422 Ga0466969_0000004
423 Ga0466972_0000002
424 Ga0466972_0000017
425 Ga0466966_0000295
426 Ga0453684_0000668
427 Ga0453684_0004066
428 Ga0453684_0020005
429 Ga0453684_0031124
430 Ga0453684_0055200
431 Ga0466970_0000857
432 Ga0466957_0001466
433 Ga0466959_0000004
434 Ga0451576_0000291
435 Ga0451576_0001369
436 Ga0495638_0000005
437 Ga0495650_0000014
438 Ga0495606_0000096
439 Ga0495616_0001231
440 Ga0495633_0000330
441 Ga0495633_0000485
442 Ga0495668_0000235
443 Ga0495668_0000489
444 Ga0495668_0002808
445 Ga0495625_0000003
446 Ga0495661_0030591
447 Ga0495658_0012905
448 Ga0495649_0000002
449 Ga0495660_0004126
450 Ga0495687_000004
451 Ga0495686_0000128
452 Ga0495686_0001835
453 Ga0496115_0023011
454 Ga0496121_0000011
455 Ga0496122_0006554
456 Ga0496123_0018014
457 Ga0496126_0046382
458 Ga0501300_001928
459 Ga0501047_0038833
460 Ga0501225_0003533
461 nmdc:mga05p37_12156_c1
462 Ga0500578_0000037
463 Ga0500646_0005568
464 Ga0500583_0000062
465 Ga0500583_0000276
466 Ga0500562_000044
467 Ga0500577_0000846
468 Ga0500604_0006153
469 Ga0500616_0000003
470 Ga0500616_0006245
471 Ga0500622_0000003
472 Ga0500622_0000008
473 Ga0500622_0000690
474 Ga0500622_0001193
475 Ga0500633_0002219
476 2929182001
477 2522551204
478 2738724499
479 2738759439
480 2738763548
481 2776615011
482 2819576166
483 2819587200
484 2819678910
485 2821142391
486 2842909606
487 2884792029
488 2890808006
489 2896090012
490 2896110571
491 2902051606
492 2904470442
493 2919696987
494 2929157702
495 2929243529
496 2929924355
497 2945977942
498 2946016206
499 8003156336
500 8055589626

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

1

1005

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zof-assembly1.cif.gz_C fusidic acid binding to the tm7/tm8 groove of acrb-f380a t protomer 0.8738 4 969
4dnt-assembly1.cif.gz_A crystal structure of the cusba heavy-metal efflux complex from escherichia coli, mutant 0.8725 4 970
7rr8-assembly1.cif.gz_B multidrug efflux pump subunit acrb 0.8722 4 969
7o3l-assembly1.cif.gz_B crystal structure of acrb double mutant 0.868 5 977
4u95-assembly1.cif.gz_C coupling of remote alternating-access transport mechanisms for protons and substrates in the multidrug efflux pump acrb 0.8657 4 969
ID Description Score Start End Superfamily
af_P38054_46_113_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9503 46 110 3.30.70.1430
af_Q2FVZ5_39_104_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9448 38 102 3.30.70.1430
4mt1A02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9185 44 130 3.30.70.1430
af_Q2FVZ5_39_104_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9182 38 102 3.30.70.1430
af_P38054_46_113_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.898 46 110 3.30.70.1430
ID Description Score Start End GO Terms
AF-A0A255Z2B3-F1-model_v4 Multidrug transporter AcrB 0.9547 1 975 GO:0005886
GO:0042910
AF-A0A661Z6U1-F1-model_v4 AcrB/AcrD/AcrF family protein 0.9491 1 838 GO:0005886
GO:0042910
AF-A0A255Z2B3-F1-model_v4 Multidrug transporter AcrB 0.949 1 975 GO:0005886
GO:0042910
AF-A0A3M1RBG3-F1-model_v4 Efflux RND transporter permease subunit 0.9384 1 477 GO:0005886
GO:0042910
AF-A0A849ZAL6-F1-model_v4 Efflux RND transporter permease subunit 0.9355 297 974 GO:0005886
GO:0042910

Map