F362093

General Info

Members Datasets Scaffolds Average Seq Length
251 150 235 364

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10005412|rootH2_100054123
Length 415
Sequence MATLRTVERGLRTRFRVSAKTVRPVRHSLGGGGRPGSVYYAVDGCGHAQIFRGMPERFVVIMAGGRGERFWPQSCAATPKHLLPIVGDKSMLAQTVDRVAGVVPRENIFVLTTLAQLEGCRSACPGLPPANIVGEPMGRDTAAATGLAMLLVKQRNPGAAFAMLPADHVIHDVKEYAALLQVAFESAESADVLVTLGIKQTAPETGFGYIQQGDRWKTVGGRPVMAVKRFVEKPNLETAKAYLASGDYFWNAGMFVWRVPVVEAAFKAHAPELYAGLAKLEAAAKSSGGWAGALTEVYPTLQRISVDYALMEKSTNVVVVPATFDWDDVGAWPAIAKHFTPDASGNVLRGLAMVEGGVNNIVVSDDGHLTAVVGASDLVVVHTANATLVCPKEKAQEIKALLKRLGEDPKTKKFL

Samples

Sample ID Description Type Environment
1 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
2 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
3 2831426010 Nostoc sp. 106C Isolate Unclassified
4 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
5 2849660919 Nostoc sp. T09 Isolate Unclassified
6 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
7 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
8 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
9 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
10 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
11 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
12 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
13 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
14 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
15 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
19 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
24 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
25 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
86 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
87 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
88 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
97 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
116 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
123 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.63
Metatranscriptomes 0
Isolates 6.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.59
Nodule 0
Rhizoplane 0.8
Rhizosphere 90.44
Stem 0
Stem Tuber 0
Unclassified 7.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10005412 3300003320 Bacteria 6972
2 rootL2_10113946 3300003322 Bacteria 5323
3 rootH1_10117124 3300003323 Bacteria 1396
4 Ga0055541_1000153 3300003841 Bacteria 34054
5 Ga0070658_10262529 3300005327 Unclassified 1467
6 Ga0070690_100007470 3300005330 Bacteria 6260
7 Ga0070690_100022514 3300005330 Bacteria 3855
8 Ga0068869_100131395 3300005334 Bacteria 1925
9 Ga0070689_100000678 3300005340 Bacteria 20674
10 Ga0070689_100006500 3300005340 Bacteria 8100
11 Ga0070691_10052429 3300005341 Unclassified 1950
12 Ga0070711_100084728 3300005439 Bacteria 2268
13 Ga0070705_100005766 3300005440 Bacteria 6052
14 Ga0070705_100037484 3300005440 Bacteria 2735
15 Ga0070694_100014794 3300005444 Unclassified 4888
16 Ga0070694_100045256 3300005444 Bacteria 2949
17 Ga0070708_100046953 3300005445 Bacteria 3813
18 Ga0070708_100101690 3300005445 Bacteria 2632
19 Ga0070681_10157822 3300005458 Unclassified 2193
20 Ga0070685_10022001 3300005466 Bacteria 3470
21 Ga0070707_100365289 3300005468 Bacteria 1402
22 Ga0070699_100140912 3300005518 Bacteria 2129
23 Ga0070686_100007164 3300005544 Bacteria 6214
24 Ga0070695_100018692 3300005545 Bacteria 4210
25 Ga0070695_100065470 3300005545 Bacteria 2367
26 Ga0070696_100019841 3300005546 Bacteria 4556
27 Ga0070693_100212402 3300005547 Unclassified 1263
28 Ga0068859_100002512 3300005617 Bacteria 18636
29 Ga0068859_100029622 3300005617 Bacteria 5493
30 Ga0068859_100146797 3300005617 Bacteria 2434
31 Ga0068859_100352102 3300005617 Bacteria 1567
32 Ga0068864_100009120 3300005618 Bacteria 8178
33 Ga0068861_100007365 3300005719 Bacteria 7539
34 Ga0068863_100064281 3300005841 Bacteria 3471
35 Ga0068858_100019744 3300005842 Bacteria 6300
36 Ga0068862_100153594 3300005844 Bacteria 2050
37 Ga0075432_10040912 3300006058 Bacteria 1618
38 Ga0068871_100007767 3300006358 Bacteria 7679
39 Ga0075428_100007318 3300006844 Bacteria 12230
40 Ga0075430_100024989 3300006846 Bacteria 5081
41 Ga0075431_100048194 3300006847 Bacteria 4394
42 Ga0075431_100089791 3300006847 Bacteria 3171
43 Ga0075431_100218869 3300006847 Bacteria 1943
44 Ga0075433_10008182 3300006852 Bacteria 8330
45 Ga0075433_10018875 3300006852 Bacteria 5739
46 Ga0075433_10033875 3300006852 Bacteria 4382
47 Ga0075434_100002788 3300006871 Bacteria 15470
48 Ga0075434_100040072 3300006871 Bacteria 4640
49 Ga0075429_100116550 3300006880 Bacteria 2335
50 Ga0075436_100006702 3300006914 Bacteria 7886
51 Ga0075436_100065392 3300006914 Bacteria 2514
52 Ga0075436_100091130 3300006914 Bacteria 2119
53 Ga0097620_100002512 3300006931 Bacteria 18636
54 Ga0097620_100146791 3300006931 Bacteria 2434
55 Ga0097620_100352089 3300006931 Bacteria 1567
56 Ga0075435_100003914 3300007076 Bacteria 10171
57 Ga0075435_100040731 3300007076 Bacteria 3711
58 Ga0099794_10092387 3300007265 Bacteria 1503
59 Ga0105240_10003475 3300009093 Bacteria 24446
60 Ga0105240_10105001 3300009093 Bacteria 3430
61 Ga0105240_10143881 3300009093 Bacteria 2847
62 Ga0105240_10187724 3300009093 Bacteria 2433
63 Ga0105240_10338332 3300009093 Bacteria 1710
64 Ga0111539_10032963 3300009094 Bacteria 6290
65 Ga0111539_10151374 3300009094 Bacteria 2715
66 Ga0111539_10480370 3300009094 Bacteria 1447
67 Ga0105245_10086610 3300009098 Unclassified 2873
68 Ga0105245_10129141 3300009098 Bacteria 2369
69 Ga0114129_10089634 3300009147 Bacteria 4264
70 Ga0114129_10395916 3300009147 Bacteria 1821
71 Ga0105238_10011838 3300009551 Bacteria 8789
72 Ga0157370_10101144 3300013104 Bacteria 2700
73 Ga0157378_10232018 3300013297 Bacteria 1759
74 Ga0163162_10185236 3300013306 Bacteria 2209
75 Ga0157375_10000070 3300013308 Bacteria 108417
76 Ga0163163_10000124 3300014325 Bacteria 81990
77 Ga0163163_10003238 3300014325 Bacteria 13804
78 Ga0163163_10143407 3300014325 Unclassified 2431
79 Ga0157379_10001938 3300014968 Bacteria 17113
80 Ga0157376_10103778 3300014969 Bacteria 2490
81 Ga0209566_100228 3300025225 Bacteria 54872
82 Ga0209025_1052412 3300025294 Bacteria 1611
83 Ga0207653_10004856 3300025885 Bacteria 4202
84 Ga0207707_10076498 3300025912 Bacteria 2921
85 Ga0207695_10010957 3300025913 Bacteria 11026
86 Ga0207695_10129497 3300025913 Bacteria 2482
87 Ga0207663_10044514 3300025916 Bacteria 2725
88 Ga0207662_10160299 3300025918 Bacteria 1437
89 Ga0207681_10132796 3300025923 Bacteria 1843
90 Ga0207687_10123425 3300025927 Bacteria 1940
91 Ga0207670_10002002 3300025936 Bacteria 10689
92 Ga0207670_10042733 3300025936 Bacteria 2989
93 Ga0207670_10140477 3300025936 Bacteria 1781
94 Ga0207667_10017215 3300025949 Bacteria 8143
95 Ga0207667_10122697 3300025949 Bacteria 2677
96 Ga0207703_10002632 3300026035 Bacteria 15478
97 Ga0207703_10345606 3300026035 Bacteria 1368
98 Ga0207676_10012708 3300026095 Bacteria 6039
99 Ga0207676_10139433 3300026095 Bacteria 2074
100 Ga0207674_10160212 3300026116 Bacteria 2205
101 Ga0207675_100101706 3300026118 Bacteria 2708
102 Ga0207428_10010328 3300027907 Bacteria 8347
103 Ga0268265_10075283 3300028380 Bacteria 2644
104 Ga0268265_10121543 3300028380 Bacteria 2152
105 Ga0268264_10447534 3300028381 Bacteria 1251
106 Ga0265337_1016880 3300028556 Bacteria 2352
107 Ga0265337_1018800 3300028556 Bacteria 2188
108 Ga0265319_1000032 3300028563 Bacteria 119321
109 Ga0265319_1017657 3300028563 Bacteria 2706
110 Ga0265334_10004867 3300028573 Bacteria 5905
111 Ga0265318_10000002 3300028577 Bacteria 428208
112 Ga0265318_10000948 3300028577 Bacteria 18729
113 Ga0265318_10024233 3300028577 Unclassified 2409
114 Ga0265338_10001479 3300028800 Bacteria 38067
115 Ga0265338_10002943 3300028800 Bacteria 24701
116 Ga0265338_10008428 3300028800 Bacteria 12519
117 Ga0265338_10053197 3300028800 Unclassified 3625
118 Ga0265338_10053246 3300028800 Bacteria 3622
119 Ga0265338_10174735 3300028800 Bacteria 1643
120 Ga0265324_10000131 3300029957 Bacteria 59086
121 Ga0265320_10000014 3300031240 Bacteria 208129
122 Ga0265320_10000821 3300031240 Bacteria 23433
123 Ga0265320_10000992 3300031240 Bacteria 21054
124 Ga0265320_10008940 3300031240 Bacteria 6084
125 Ga0265320_10010256 3300031240 Bacteria 5590
126 Ga0265320_10010783 3300031240 Bacteria 5417
127 Ga0265320_10031870 3300031240 Bacteria 2704
128 Ga0265320_10038348 3300031240 Bacteria 2405
129 Ga0265320_10054704 3300031240 Bacteria 1925
130 Ga0265329_10003890 3300031242 Bacteria 6396
131 Ga0265339_10005738 3300031249 Bacteria 8245
132 Ga0265327_10000023 3300031251 Bacteria 382703
133 Ga0265327_10010062 3300031251 Bacteria 6712
134 Ga0265316_10024419 3300031344 Bacteria 5065
135 Ga0265316_10058827 3300031344 Unclassified 2992
136 Ga0265316_10115059 3300031344 Bacteria 2034
137 Ga0265313_10005118 3300031595 Bacteria 9766
138 Ga0265313_10027207 3300031595 Bacteria 2997
139 Ga0307508_10000283 3300031616 Bacteria 62443
140 Ga0265314_10000453 3300031711 Bacteria 54843
141 Ga0265314_10023907 3300031711 Bacteria 4645
142 Ga0265314_10025995 3300031711 Bacteria 4405
143 Ga0265314_10042343 3300031711 Bacteria 3250
144 Ga0265342_10005180 3300031712 Bacteria 10027
145 Ga0265342_10055141 3300031712 Bacteria 2360
146 Ga0373945_0088110 3300035116 Unclassified 1198
147 Ga0373946_0008920 3300035171 Bacteria 3686
148 Ga0373927_0013161 3300035695 Bacteria 5502
149 Ga0373927_0064150 3300035695 Bacteria 2376
150 Ga0373947_0001185 3300035725 Bacteria 16047
151 Ga0373925_0003593 3300037068 Bacteria 11953
152 Ga0373925_0008734 3300037068 Bacteria 7380
153 Ga0395905_0000036 3300037471 Bacteria 271733
154 Ga0395905_0136906 3300037471 Unclassified 2304
155 Ga0436364_1418774 3300037853 Bacteria 2529
156 Ga0451577_0000012 3300042876 Bacteria 575467
157 Ga0451577_0003491 3300042876 Bacteria 17472
158 Ga0451577_0004437 3300042876 Bacteria 14812
159 Ga0451577_0060040 3300042876 Bacteria 3390
160 Ga0451577_0139579 3300042876 Unclassified 2177
161 Ga0451577_0249027 3300042876 Bacteria 1608
162 Ga0466972_0037897 3300044658 Bacteria 2355
163 Ga0453683_0178973 3300044673 Bacteria 1345
164 Ga0453684_0000001 3300044712 Bacteria 2623166
165 Ga0453684_0000046 3300044712 Bacteria 575242
166 Ga0453684_0000238 3300044712 Bacteria 236003
167 Ga0453684_0022040 3300044712 Bacteria 9476
168 Ga0453684_0047663 3300044712 Bacteria 5679
169 Ga0453684_0048911 3300044712 Bacteria 5583
170 Ga0453684_0108411 3300044712 Bacteria 3380
171 Ga0453684_0113398 3300044712 Bacteria 3288
172 Ga0453684_0204578 3300044712 Bacteria 2299
173 Ga0466970_0052796 3300044765 Bacteria 2170
174 Ga0451576_0064090 3300045051 Bacteria 3829
175 Ga0451576_0072823 3300045051 Unclassified 3575
176 Ga0451576_0111069 3300045051 Bacteria 2853
177 Ga0451576_0151473 3300045051 Bacteria 2419
178 Ga0451576_0422140 3300045051 Bacteria 1399
179 Ga0451576_0434829 3300045051 Bacteria 1377
180 Ga0495592_0094321 3300046454 Bacteria 2142
181 Ga0495592_0112553 3300046454 Bacteria 1924
182 Ga0495603_0056022 3300046455 Bacteria 2335
183 Ga0495641_0012645 3300046461 Viruses 4704
184 Ga0495582_0001786 3300046473 Bacteria 12145
185 Ga0495630_0000321 3300046517 Bacteria 38295
186 Ga0495630_0001914 3300046517 Bacteria 14509
187 Ga0495630_0125094 3300046517 Bacteria 1951
188 Ga0495630_0131999 3300046517 Bacteria 1897
189 Ga0495643_0114930 3300046522 Bacteria 1365
190 Ga0495666_0014946 3300046526 Unclassified 3864
191 Ga0495652_0118955 3300046529 Bacteria 2111
192 Ga0495586_0000008 3300046535 Bacteria 148781
193 Ga0495659_0004034 3300046664 Bacteria 4644
194 Ga0495588_0023718 3300046674 Bacteria 3040
195 Ga0495599_0058186 3300046678 Bacteria 2418
196 Ga0495658_0001402 3300046683 Bacteria 12660
197 Ga0495658_0003521 3300046683 Bacteria 7748
198 Ga0495674_0003680 3300047319 Bacteria 14915
199 Ga0495674_0177807 3300047319 Bacteria 1773
200 Ga0495680_0219004 3300047322 Unclassified 1360
201 Ga0495675_0096063 3300047444 Bacteria 1858
202 Ga0496107_0079431 3300048910 Unclassified 2391
203 Ga0496115_0081582 3300048918 Bacteria 2634
204 Ga0496116_0007035 3300048919 Bacteria 10074
205 Ga0496124_0005084 3300048927 Bacteria 14996
206 Ga0496125_0054010 3300048928 Bacteria 3288
207 Ga0501032_0029632 3300049569 Unclassified 3754
208 Ga0501034_0032635 3300049571 Bacteria 5287
209 Ga0501046_0000129 3300049580 Bacteria 80786
210 Ga0501046_0029569 3300049580 Unclassified 4452
211 Ga0501046_0072282 3300049580 Unclassified 2678
212 Ga0501047_0085218 3300049581 Bacteria 3036
213 Ga0501047_0104560 3300049581 Unclassified 2711
214 Ga0501083_0075809 3300049744 Bacteria 2233
215 Ga0501035_0083579 3300049822 Bacteria 2817
216 Ga0501044_0002540 3300049823 Bacteria 20775
217 nmdc:mga0qj67_24821_c1 3300050509 Bacteria 4625
218 nmdc:mga06r32_185707_c1 3300050510 Bacteria 2066
219 nmdc:mga06r32_208733_c1 3300050510 Bacteria 1941
220 nmdc:mga06r32_414090_c1 3300050510 Bacteria 1329
221 nmdc:mga08y16_143690_c1 3300050511 Bacteria 2480
222 nmdc:mga08y16_150355_c1 3300050511 Bacteria 2420
223 nmdc:mga08y16_263612_c1 3300050511 Bacteria 1779
224 nmdc:mga08y16_318811_c1 3300050511 Unclassified 1600
225 nmdc:mga08y16_6173_c1 3300050511 Bacteria 12575
226 nmdc:mga0n895_102425_c1 3300050512 Bacteria 2874
227 nmdc:mga0n895_107575_c1 3300050512 Unclassified 2802
228 nmdc:mga0n895_1661_c1 3300050512 Bacteria 16818
229 nmdc:mga0n895_177567_c1 3300050512 Bacteria 2161
230 nmdc:mga0rr50_133450_c1 3300050513 Bacteria 1991
231 nmdc:mga08x19_70091_c1 3300050514 Bacteria 2284
232 nmdc:mga0a205_107663_c1 3300050515 Bacteria 2686
233 nmdc:mga0a205_4020_c1 3300050515 Bacteria 13156
234 Ga0500622_0018294 3300053156 Bacteria 3725
235 Ga0501082_0041114 3300060353 Unclassified 3986

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035116 Ga0373945_0088110 Ga0373945_0088110_150_1112 311
2 3300005844 Ga0068862_100153594 Ga0068862_1001535943 316
3 3300028380 Ga0268265_10121543 Ga0268265_101215433 316
4 3300025916 Ga0207663_10044514 Ga0207663_100445142 319
5 3300006871 Ga0075434_100002788 Ga0075434_10000278815 320
6 3300009147 Ga0114129_10089634 Ga0114129_100896344 320
7 3300050512 nmdc:mga0n895_1661_c1 nmdc:mga0n895_1661_c1_2798_3760 320
8 iso_pu_bacteria 2913912277 2913919592 326
9 3300035171 Ga0373946_0008920 Ga0373946_0008920_2293_3357 335
10 3300003322 rootL2_10113946 rootL2_101139464 338
11 3300006914 Ga0075436_100006702 Ga0075436_1000067023 339
12 3300050514 nmdc:mga08x19_70091_c1 nmdc:mga08x19_70091_c1_925_1995 339
13 3300006847 Ga0075431_100089791 Ga0075431_1000897911 340
14 3300037853 Ga0436364_1418774 Ga0436364_1418774_1217_2257 340
15 3300050511 nmdc:mga08y16_318811_c1 nmdc:mga08y16_318811_c1_243_1298 340
16 3300003841 Ga0055541_1000153 Ga0055541_10001537 342
17 3300025225 Ga0209566_100228 Ga0209566_10022823 342
18 3300044673 Ga0453683_0178973 Ga0453683_0178973_267_1316 343
19 iso_pu_bacteria 2617270889 2617916847 344
20 iso_pu_bacteria 2831426010 2831431678 344
21 iso_pu_bacteria 2848694841 2848702748 344
22 iso_pu_bacteria 2849660919 2849662301 344
23 iso_pu_bacteria 2913844669 2913847619 344
24 iso_pu_bacteria 642555144 642604055 344
25 iso_pu_bacteria 2886627955 2886634648 346
26 iso_pu_bacteria 2913939268 2913943352 346
27 3300044712 Ga0453684_0022040 Ga0453684_0022040_8308_9369 347
28 iso_pu_bacteria 2857453340 2857455281 347
29 3300045051 Ga0451576_0111069 Ga0451576_0111069_112_1248 348
30 3300049571 Ga0501034_0032635 Ga0501034_0032635_358_1497 348
31 3300009147 Ga0114129_10395916 Ga0114129_103959162 349
32 3300049580 Ga0501046_0000129 Ga0501046_0000129_40065_41126 349
33 3300060353 Ga0501082_0041114 Ga0501082_0041114_2233_3294 349
34 3300005340 Ga0070689_100000678 Ga0070689_10000067813 350
35 3300005445 Ga0070708_100101690 Ga0070708_1001016902 350
36 3300009094 Ga0111539_10151374 Ga0111539_101513742 350
37 3300025936 Ga0207670_10042733 Ga0207670_100427333 350
38 3300026116 Ga0207674_10160212 Ga0207674_101602122 350
39 3300046664 Ga0495659_0004034 Ga0495659_0004034_3437_4501 350
40 3300050511 nmdc:mga08y16_150355_c1 nmdc:mga08y16_150355_c1_1012_2139 350
41 3300005618 Ga0068864_100009120 Ga0068864_1000091209 351
42 3300006880 Ga0075429_100116550 Ga0075429_1001165502 351
43 3300014325 Ga0163163_10003238 Ga0163163_100032383 351
44 3300026095 Ga0207676_10012708 Ga0207676_100127083 351
45 3300005334 Ga0068869_100131395 Ga0068869_1001313952 352
46 3300005468 Ga0070707_100365289 Ga0070707_1003652892 352
47 3300005617 Ga0068859_100002512 Ga0068859_1000025123 352
48 3300005719 Ga0068861_100007365 Ga0068861_1000073652 352
49 3300005842 Ga0068858_100019744 Ga0068858_1000197443 352
50 3300006931 Ga0097620_100002512 Ga0097620_1000025123 352
51 3300007076 Ga0075435_100040731 Ga0075435_1000407313 352
52 3300013306 Ga0163162_10185236 Ga0163162_101852361 352
53 3300014968 Ga0157379_10001938 Ga0157379_100019386 352
54 3300025918 Ga0207662_10160299 Ga0207662_101602992 352
55 3300025923 Ga0207681_10132796 Ga0207681_101327962 352
56 3300026035 Ga0207703_10002632 Ga0207703_100026326 352
57 3300026118 Ga0207675_100101706 Ga0207675_1001017061 352
58 3300027907 Ga0207428_10010328 Ga0207428_100103283 352
59 3300050511 nmdc:mga08y16_6173_c1 nmdc:mga08y16_6173_c1_1419_2477 352
60 3300031249 Ga0265339_10005738 Ga0265339_100057384 353
61 3300046522 Ga0495643_0114930 Ga0495643_0114930_230_1291 353
62 3300003323 rootH1_10117124 rootH1_101171242 354
63 3300005340 Ga0070689_100006500 Ga0070689_1000065004 354
64 3300005444 Ga0070694_100045256 Ga0070694_1000452562 354
65 3300005518 Ga0070699_100140912 Ga0070699_1001409122 354
66 3300025913 Ga0207695_10010957 Ga0207695_100109574 354
67 3300025936 Ga0207670_10002002 Ga0207670_100020024 354
68 3300025949 Ga0207667_10122697 Ga0207667_101226971 354
69 3300028556 Ga0265337_1018800 Ga0265337_10188002 354
70 3300045051 Ga0451576_0434829 Ga0451576_0434829_241_1305 354
71 3300046455 Ga0495603_0056022 Ga0495603_0056022_688_1752 354
72 3300046674 Ga0495588_0023718 Ga0495588_0023718_706_1770 354
73 3300048919 Ga0496116_0007035 Ga0496116_0007035_735_1826 354
74 3300049569 Ga0501032_0029632 Ga0501032_0029632_1237_2301 354
75 3300049580 Ga0501046_0072282 Ga0501046_0072282_695_1759 354
76 3300049581 Ga0501047_0104560 Ga0501047_0104560_784_1848 354
77 3300049823 Ga0501044_0002540 Ga0501044_0002540_18987_20051 354
78 iso_pu_bacteria 2548877040 2550903701 354
79 iso_pu_bacteria 2889295896 2889299738 354
80 iso_pu_bacteria 2981284811 2981287181 354
81 iso_pu_bacteria 2981289755 2981292129 354
82 iso_pu_bacteria 2981980479 2981982811 354
83 iso_pu_bacteria 2981985349 2981987399 354
84 3300005439 Ga0070711_100084728 Ga0070711_1000847282 355
85 3300029957 Ga0265324_10000131 Ga0265324_100001312 355
86 3300031711 Ga0265314_10042343 Ga0265314_100423433 355
87 3300042876 Ga0451577_0139579 Ga0451577_0139579_968_2035 355
88 3300044658 Ga0466972_0037897 Ga0466972_0037897_1089_2168 355
89 3300044765 Ga0466970_0052796 Ga0466970_0052796_128_1207 355
90 3300048927 Ga0496124_0005084 Ga0496124_0005084_12528_13619 355
91 3300048928 Ga0496125_0054010 Ga0496125_0054010_609_1700 355
92 3300005440 Ga0070705_100005766 Ga0070705_1000057662 356
93 3300005545 Ga0070695_100018692 Ga0070695_1000186924 356
94 3300005545 Ga0070695_100065470 Ga0070695_1000654702 356
95 3300005546 Ga0070696_100019841 Ga0070696_1000198413 356
96 3300005547 Ga0070693_100212402 Ga0070693_1002124021 356
97 3300006058 Ga0075432_10040912 Ga0075432_100409122 356
98 3300006846 Ga0075430_100024989 Ga0075430_1000249893 356
99 3300006852 Ga0075433_10008182 Ga0075433_100081827 356
100 3300006852 Ga0075433_10018875 Ga0075433_100188755 356
101 3300006852 Ga0075433_10033875 Ga0075433_100338752 356
102 3300006871 Ga0075434_100040072 Ga0075434_1000400722 356
103 3300006914 Ga0075436_100065392 Ga0075436_1000653923 356
104 3300007076 Ga0075435_100003914 Ga0075435_10000391410 356
105 3300025885 Ga0207653_10004856 Ga0207653_100048563 356
106 3300045051 Ga0451576_0072823 Ga0451576_0072823_2162_3295 356
107 3300046473 Ga0495582_0001786 Ga0495582_0001786_9448_10521 356
108 3300046517 Ga0495630_0125094 Ga0495630_0125094_544_1674 356
109 3300046683 Ga0495658_0001402 Ga0495658_0001402_6969_8042 356
110 3300046683 Ga0495658_0003521 Ga0495658_0003521_3349_4476 356
111 3300050509 nmdc:mga0qj67_24821_c1 nmdc:mga0qj67_24821_c1_2931_4001 356
112 3300050512 nmdc:mga0n895_102425_c1 nmdc:mga0n895_102425_c1_1523_2593 356
113 3300050512 nmdc:mga0n895_177567_c1 nmdc:mga0n895_177567_c1_150_1220 356
114 3300050513 nmdc:mga0rr50_133450_c1 nmdc:mga0rr50_133450_c1_511_1581 356
115 3300050515 nmdc:mga0a205_107663_c1 nmdc:mga0a205_107663_c1_1420_2490 356
116 3300050515 nmdc:mga0a205_4020_c1 nmdc:mga0a205_4020_c1_7166_8236 356
117 3300046454 Ga0495592_0094321 Ga0495592_0094321_575_1708 357
118 3300046517 Ga0495630_0000321 Ga0495630_0000321_20209_21342 357
119 3300046529 Ga0495652_0118955 Ga0495652_0118955_209_1342 357
120 3300046535 Ga0495586_0000008 Ga0495586_0000008_41900_43033 357
121 3300047319 Ga0495674_0003680 Ga0495674_0003680_10879_12012 357
122 3300047319 Ga0495674_0177807 Ga0495674_0177807_37_1170 357
123 3300005341 Ga0070691_10052429 Ga0070691_100524291 358
124 3300005444 Ga0070694_100014794 Ga0070694_1000147944 358
125 3300025294 Ga0209025_1052412 Ga0209025_10524122 358
126 3300042876 Ga0451577_0060040 Ga0451577_0060040_525_1670 359
127 3300044712 Ga0453684_0000238 Ga0453684_0000238_136923_138065 360
128 3300053156 Ga0500622_0018294 Ga0500622_0018294_1661_2743 360
129 3300009093 Ga0105240_10105001 Ga0105240_101050012 361
130 3300009094 Ga0111539_10480370 Ga0111539_104803702 361
131 3300042876 Ga0451577_0000012 Ga0451577_0000012_497517_498602 361
132 3300044712 Ga0453684_0047663 Ga0453684_0047663_3819_4904 361
133 3300044712 Ga0453684_0113398 Ga0453684_0113398_1680_2765 361
134 3300049744 Ga0501083_0075809 Ga0501083_0075809_53_1156 361
135 3300050511 nmdc:mga08y16_263612_c1 nmdc:mga08y16_263612_c1_552_1682 361
136 3300028563 Ga0265319_1000032 Ga0265319_100003267 362
137 3300028563 Ga0265319_1017657 Ga0265319_10176572 362
138 3300028577 Ga0265318_10000948 Ga0265318_100009487 362
139 3300028577 Ga0265318_10024233 Ga0265318_100242332 362
140 3300031240 Ga0265320_10000014 Ga0265320_10000014106 362
141 3300031240 Ga0265320_10000992 Ga0265320_100009924 362
142 3300031240 Ga0265320_10008940 Ga0265320_100089404 362
143 3300031240 Ga0265320_10054704 Ga0265320_100547042 362
144 3300031251 Ga0265327_10000023 Ga0265327_10000023191 362
145 3300031344 Ga0265316_10115059 Ga0265316_101150592 362
146 3300031616 Ga0307508_10000283 Ga0307508_1000028318 362
147 3300031711 Ga0265314_10023907 Ga0265314_100239074 362
148 3300037471 Ga0395905_0000036 Ga0395905_0000036_75422_76510 362
149 3300042876 Ga0451577_0003491 Ga0451577_0003491_6888_7976 362
150 3300042876 Ga0451577_0249027 Ga0451577_0249027_386_1474 362
151 3300044712 Ga0453684_0048911 Ga0453684_0048911_527_1615 362
152 3300044712 Ga0453684_0204578 Ga0453684_0204578_675_1763 362
153 3300049580 Ga0501046_0029569 Ga0501046_0029569_2624_3712 362
154 3300049822 Ga0501035_0083579 Ga0501035_0083579_1035_2123 362
155 3300028381 Ga0268264_10447534 Ga0268264_104475341 363
156 3300028800 Ga0265338_10001479 Ga0265338_1000147919 364
157 3300031240 Ga0265320_10000821 Ga0265320_1000082114 364
158 3300031240 Ga0265320_10010256 Ga0265320_100102562 364
159 3300031712 Ga0265342_10055141 Ga0265342_100551412 364
160 3300044712 Ga0453684_0000001 Ga0453684_0000001_570110_571285 365
161 3300006358 Ga0068871_100007767 Ga0068871_1000077674 366
162 3300006844 Ga0075428_100007318 Ga0075428_1000073182 366
163 3300009098 Ga0105245_10086610 Ga0105245_100866102 366
164 3300025936 Ga0207670_10140477 Ga0207670_101404772 366
165 3300050510 nmdc:mga06r32_414090_c1 nmdc:mga06r32_414090_c1_60_1184 366
166 3300005440 Ga0070705_100037484 Ga0070705_1000374842 367
167 3300005445 Ga0070708_100046953 Ga0070708_1000469533 367
168 3300005544 Ga0070686_100007164 Ga0070686_1000071642 367
169 3300005617 Ga0068859_100146797 Ga0068859_1001467973 367
170 3300005617 Ga0068859_100352102 Ga0068859_1003521022 367
171 3300006931 Ga0097620_100146791 Ga0097620_1001467913 367
172 3300006931 Ga0097620_100352089 Ga0097620_1003520892 367
173 3300007265 Ga0099794_10092387 Ga0099794_100923871 367
174 3300014325 Ga0163163_10143407 Ga0163163_101434072 367
175 3300026035 Ga0207703_10345606 Ga0207703_103456061 367
176 3300026095 Ga0207676_10139433 Ga0207676_101394331 367
177 3300028380 Ga0268265_10075283 Ga0268265_100752832 367
178 3300031242 Ga0265329_10003890 Ga0265329_100038901 367
179 3300031251 Ga0265327_10010062 Ga0265327_100100622 367
180 3300031711 Ga0265314_10000453 Ga0265314_1000045323 367
181 3300048910 Ga0496107_0079431 Ga0496107_0079431_818_1945 367
182 3300005330 Ga0070690_100022514 Ga0070690_1000225145 368
183 3300005466 Ga0070685_10022001 Ga0070685_100220013 368
184 3300005841 Ga0068863_100064281 Ga0068863_1000642812 368
185 3300006847 Ga0075431_100218869 Ga0075431_1002188692 368
186 3300009093 Ga0105240_10338332 Ga0105240_103383322 368
187 3300013297 Ga0157378_10232018 Ga0157378_102320182 368
188 3300013308 Ga0157375_10000070 Ga0157375_1000007073 368
189 3300014325 Ga0163163_10000124 Ga0163163_1000012455 368
190 3300014969 Ga0157376_10103778 Ga0157376_101037782 368
191 3300028556 Ga0265337_1016880 Ga0265337_10168802 368
192 3300028573 Ga0265334_10004867 Ga0265334_100048673 368
193 3300028800 Ga0265338_10008428 Ga0265338_100084286 368
194 3300028800 Ga0265338_10053246 Ga0265338_100532462 368
195 3300031240 Ga0265320_10010783 Ga0265320_100107834 368
196 3300031240 Ga0265320_10038348 Ga0265320_100383482 368
197 3300031344 Ga0265316_10024419 Ga0265316_100244192 368
198 3300031344 Ga0265316_10058827 Ga0265316_100588272 368
199 3300031595 Ga0265313_10005118 Ga0265313_100051183 368
200 3300031712 Ga0265342_10005180 Ga0265342_100051802 368
201 3300042876 Ga0451577_0004437 Ga0451577_0004437_5222_6355 368
202 3300044712 Ga0453684_0108411 Ga0453684_0108411_1936_3066 368
203 3300045051 Ga0451576_0064090 Ga0451576_0064090_1354_2487 368
204 3300045051 Ga0451576_0151473 Ga0451576_0151473_790_1923 368
205 3300046461 Ga0495641_0012645 Ga0495641_0012645_1753_2886 368
206 3300046517 Ga0495630_0131999 Ga0495630_0131999_226_1359 368
207 3300046678 Ga0495599_0058186 Ga0495599_0058186_431_1564 368
208 3300047444 Ga0495675_0096063 Ga0495675_0096063_544_1677 368
209 3300049581 Ga0501047_0085218 Ga0501047_0085218_1244_2377 368
210 3300050510 nmdc:mga06r32_208733_c1 nmdc:mga06r32_208733_c1_104_1234 368
211 3300005458 Ga0070681_10157822 Ga0070681_101578222 369
212 3300006847 Ga0075431_100048194 Ga0075431_1000481943 369
213 3300006914 Ga0075436_100091130 Ga0075436_1000911301 369
214 3300009093 Ga0105240_10003475 Ga0105240_100034754 369
215 3300025912 Ga0207707_10076498 Ga0207707_100764983 369
216 3300028800 Ga0265338_10053197 Ga0265338_100531973 369
217 3300035695 Ga0373927_0013161 Ga0373927_0013161_1495_2631 369
218 3300035725 Ga0373947_0001185 Ga0373947_0001185_3022_4158 369
219 3300037068 Ga0373925_0008734 Ga0373925_0008734_4506_5642 369
220 3300045051 Ga0451576_0422140 Ga0451576_0422140_134_1267 369
221 3300046454 Ga0495592_0112553 Ga0495592_0112553_44_1180 369
222 3300046517 Ga0495630_0001914 Ga0495630_0001914_142_1278 369
223 3300046526 Ga0495666_0014946 Ga0495666_0014946_361_1497 369
224 3300050510 nmdc:mga06r32_185707_c1 nmdc:mga06r32_185707_c1_622_1755 369
225 3300050512 nmdc:mga0n895_107575_c1 nmdc:mga0n895_107575_c1_190_1323 369
226 3300005330 Ga0070690_100007470 Ga0070690_1000074702 370
227 3300005617 Ga0068859_100029622 Ga0068859_1000296223 370
228 3300009094 Ga0111539_10032963 Ga0111539_100329636 370
229 3300009098 Ga0105245_10129141 Ga0105245_101291412 370
230 3300009551 Ga0105238_10011838 Ga0105238_100118385 370
231 3300025927 Ga0207687_10123425 Ga0207687_101234252 370
232 3300035695 Ga0373927_0064150 Ga0373927_0064150_159_1292 370
233 3300037068 Ga0373925_0003593 Ga0373925_0003593_1609_2742 370
234 3300047322 Ga0495680_0219004 Ga0495680_0219004_165_1304 370
235 3300050511 nmdc:mga08y16_143690_c1 nmdc:mga08y16_143690_c1_593_1729 370
236 3300005327 Ga0070658_10262529 Ga0070658_102625292 371
237 3300009093 Ga0105240_10143881 Ga0105240_101438813 371
238 3300009093 Ga0105240_10187724 Ga0105240_101877242 371
239 3300013104 Ga0157370_10101144 Ga0157370_101011443 371
240 3300025913 Ga0207695_10129497 Ga0207695_101294972 371
241 3300025949 Ga0207667_10017215 Ga0207667_100172154 371
242 3300028800 Ga0265338_10002943 Ga0265338_1000294313 371
243 3300028800 Ga0265338_10174735 Ga0265338_101747352 371
244 3300048918 Ga0496115_0081582 Ga0496115_0081582_510_1652 371
245 3300037471 Ga0395905_0136906 Ga0395905_0136906_358_1500 372
246 3300044712 Ga0453684_0000046 Ga0453684_0000046_356743_357870 375
247 3300028577 Ga0265318_10000002 Ga0265318_10000002381 383
248 3300031240 Ga0265320_10031870 Ga0265320_100318703 383
249 3300031595 Ga0265313_10027207 Ga0265313_100272071 383
250 3300031711 Ga0265314_10025995 Ga0265314_100259953 383
251 3300003320 rootH2_10005412 rootH2_100054123 415

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22640

ManC_GMP_beta-helix

MannoseP isomerase/GMP-like beta-helix domain

356

405

0.89

PF00483

NTP_transferase

Nucleotidyl transferase

58

344

0.87

PF12804

NTP_transf_3

MobA-like NTP transferase domain

59

242

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cu2-assembly1.cif.gz_A-2 crystal structure of mannose-1-phosphate geranyltransferase from thermus thermophilus hb8 0.9355 56 405
2cu2-assembly1.cif.gz_A-2 crystal structure of mannose-1-phosphate geranyltransferase from thermus thermophilus hb8 0.9251 56 405
2x5s-assembly1.cif.gz_B crystal structure of t. maritima gdp-mannose pyrophosphorylase in apo state. 0.8821 57 405
2x5s-assembly1.cif.gz_B crystal structure of t. maritima gdp-mannose pyrophosphorylase in apo state. 0.8747 57 405
2qh5-assembly1.cif.gz_A crystal structure of mannose-6-phosphate isomerase from helicobacter pylori 0.865 56 328
ID Description Score Start End Superfamily
2cu2A00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9355 56 405 3.90.550.10
af_P24174_4_358_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9298 56 408 3.90.550.10
2cu2A00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9251 56 405 3.90.550.10
af_P24174_4_358_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9223 56 408 3.90.550.10
2x5sB00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8821 57 405 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A348NQ80-F1-model_v4 Mannose-1-phosphate guanyltransferase 0.9884 54 301 GO:0004475
GO:0009298
AF-A0A7W0V552-F1-model_v4 NTP transferase domain-containing protein 0.9847 55 205 GO:0004475
GO:0009298
AF-A0A348NQ80-F1-model_v4 Mannose-1-phosphate guanyltransferase 0.9844 54 301 GO:0004475
GO:0009298
AF-A0A1J4XLD2-F1-model_v4 Mannose-1-phosphate guanyltransferase 0.9833 56 415 GO:0004475
GO:0009298
AF-A0A7C1IZM1-F1-model_v4 Mannose-1-phosphate guanylyltransferase 0.9825 56 176 GO:0004475
GO:0009298

Feature Viewer

pLDDT pTM Quality
87.98 0.83 High
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Predicted Structure (AlphaFold2)

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