F362373

General Info

Members Datasets Scaffolds Average Seq Length
251 148 251 1041

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10001781|Ga0114129_1000178116
Length 1091
Sequence MPWRGSRCGGRCSRRRRRAGISRRCWTARNRNFGQGENAIMWLVFTAMRRPITILVAMISVALAAVMAIRQMKVDIFPKLGAPAIYVAQPYGGMDPSQMEGYLTYYYEYHFLYVTGIEHVESKNIQGIALMKLVFHQDTDMSQAMGEVVGYVNRARAFMPPGAVPPFIMRFDAGSVPVAQLVFSSSTRTVPEMQDIALNRVRPIFATLPGVSAPPPFGGSQRTIVVRVDPEKLREYRLSPDEVVFAVNRATTVLPSGNVRTGDVIRIANTNATLGGNIQELLDAPLRVGAGPTVYLRDIGTITDTADIVVGYAHVDDKRTVYIPVTKRADASTLDVIRNVRRALPAMQNAAPEDVRIDLVFDQSRYVLGALNGLIGEALLGAFLTGLMVLVFLRDLRSSLIVVITIPFSILSAVVCLWLSGQTVNIMTLGGLALAVGVLVDEATVAIENIHTHLATGMSSARAALAASQKTMTARFLSMLCVLAVFIPSVFMAGVGRQLFVPLSLAVGFAMVSSFVLSSTLVPVLATWMLRAGHVSAPPFFERLRSSYGRRLRSALGARSLVVGVYAAATLLFIALVYPRIGTEIFPSVDSRQIQLRLRAPTGTRLERTELVEMKAMDVIRNVVGPDNVEITTGFIGVQTPNYPINTIYLFASGQHEAVIGVSLKPNAPPVTEGLKERIRRELKQALPTVAVSFEAADIISQVMSFGSPTPIEVAIQGPSLAASRGFAEKVRAELVKIDALRDLQYAQPLDYPSLQIQINRDRAGQFGVTPADVGRSLVAATSSSRYTDLNFWRDPGSGNGFQIQVELPQAKMASLEDVADLPVMSRTAGGSLGRPLVSDVATVDYGTVPGEVDRYNMQRVVSFTANIHGKPLGAVVGDIRAAVARAGAPPRGVTVNNRGQVPAFEETTAGLRSGLLLAIVVIFLLLAANFQSFRLAIAVVSAVPAVICGVLLMLMITGTTLNVQVFMGAIMAIGISVANAILLVTFAETARRDGASVFDAAIDGARGRLRAILMTASAMIAGMVPLALGTGERAQTAPLGRAVIGGLFLATIATLAVLPAVYTLVQARVRTVSPTLDPDDPASRHYDPKK

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
96 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
106 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
107 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
108 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
109 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
131 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
132 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
146 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.59
Nodule 0
Rhizoplane 1.2
Rhizosphere 94.82
Stem 0
Stem Tuber 0
Unclassified 2.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000718 3300003203 Bacteria 15496
2 JGI25406J46586_10003026 3300003203 Bacteria 7940
3 rootH2_10046803 3300003320 Bacteria 4232
4 Ga0065712_10068305 3300005290 Bacteria 11968
5 Ga0065715_10001114 3300005293 Bacteria 24014
6 Ga0070658_10002276 3300005327 Bacteria 16095
7 Ga0070683_100000006 3300005329 Bacteria 361071
8 Ga0070683_100007573 3300005329 Bacteria 9181
9 Ga0070683_100030691 3300005329 Bacteria 4882
10 Ga0070670_100000667 3300005331 Bacteria 26650
11 Ga0068869_100008313 3300005334 Bacteria 6687
12 Ga0070680_100006483 3300005336 Bacteria 8902
13 Ga0070660_100006327 3300005339 Bacteria 8201
14 Ga0070671_100001519 3300005355 Bacteria 17402
15 Ga0070667_100000325 3300005367 Bacteria 53336
16 Ga0070709_10004116 3300005434 Bacteria 7843
17 Ga0070681_10018084 3300005458 Bacteria 7046
18 Ga0070685_10003623 3300005466 Bacteria 7840
19 Ga0070698_100017077 3300005471 Bacteria 7651
20 Ga0070698_100017088 3300005471 Bacteria 7647
21 Ga0070698_100020665 3300005471 Bacteria 6903
22 Ga0070699_100002840 3300005518 Bacteria 15452
23 Ga0070679_100001343 3300005530 Bacteria 21712
24 Ga0070679_100007532 3300005530 Bacteria 10183
25 Ga0070679_100029814 3300005530 Bacteria 5383
26 Ga0070684_100000018 3300005535 Bacteria 136597
27 Ga0070684_100000513 3300005535 Bacteria 26640
28 Ga0070684_100016239 3300005535 Bacteria 6081
29 Ga0070697_100001229 3300005536 Bacteria 19342
30 Ga0070697_100009189 3300005536 Bacteria 7724
31 Ga0070672_100011337 3300005543 Bacteria 6218
32 Ga0070665_100031994 3300005548 Bacteria 5295
33 Ga0070665_100054306 3300005548 Bacteria 4018
34 Ga0068855_100015756 3300005563 Bacteria 9093
35 Ga0068855_100024525 3300005563 Bacteria 7217
36 Ga0068855_100025919 3300005563 Bacteria 7013
37 Ga0068855_100048801 3300005563 Bacteria 4995
38 Ga0068857_100000373 3300005577 Bacteria 31362
39 Ga0068856_100028265 3300005614 Bacteria 5475
40 Ga0068859_100024712 3300005617 Bacteria 6030
41 Ga0068859_100027574 3300005617 Bacteria 5697
42 Ga0068863_100009073 3300005841 Bacteria 9713
43 Ga0068863_100027631 3300005841 Bacteria 5413
44 Ga0068860_100006798 3300005843 Bacteria 11466
45 Ga0081455_10015134 3300005937 Bacteria 7507
46 Ga0081539_10000025 3300005985 Bacteria 340255
47 Ga0081539_10002857 3300005985 Bacteria 22977
48 Ga0081539_10003027 3300005985 Bacteria 21796
49 Ga0097621_100003239 3300006237 Bacteria 11193
50 Ga0068871_100000424 3300006358 Bacteria 29095
51 Ga0075428_100015894 3300006844 Bacteria 8328
52 Ga0075431_100002471 3300006847 Bacteria 17818
53 Ga0075431_100014852 3300006847 Bacteria 7883
54 Ga0075434_100023228 3300006871 Bacteria 6041
55 Ga0075436_100002528 3300006914 Bacteria 12591
56 Ga0097620_100024711 3300006931 Bacteria 6030
57 Ga0097620_100027573 3300006931 Bacteria 5697
58 Ga0075435_100006237 3300007076 Bacteria 8419
59 Ga0105240_10000836 3300009093 Bacteria 55438
60 Ga0105240_10001028 3300009093 Bacteria 49569
61 Ga0105240_10002117 3300009093 Bacteria 32479
62 Ga0105240_10003789 3300009093 Bacteria 23359
63 Ga0105240_10004130 3300009093 Bacteria 22268
64 Ga0105240_10006826 3300009093 Bacteria 16696
65 Ga0105240_10009834 3300009093 Bacteria 13500
66 Ga0105240_10022468 3300009093 Bacteria 8360
67 Ga0111539_10029736 3300009094 Bacteria 6650
68 Ga0105245_10000362 3300009098 Bacteria 42489
69 Ga0105247_10000768 3300009101 Bacteria 24730
70 Ga0114129_10000152 3300009147 Bacteria 73518
71 Ga0114129_10001781 3300009147 Bacteria 29343
72 Ga0114129_10002204 3300009147 Bacteria 26849
73 Ga0114129_10006749 3300009147 Bacteria 16297
74 Ga0114129_10007722 3300009147 Bacteria 15300
75 Ga0114129_10020474 3300009147 Bacteria 9409
76 Ga0114129_10023283 3300009147 Bacteria 8785
77 Ga0114129_10030761 3300009147 Bacteria 7592
78 Ga0114129_10129517 3300009147 Bacteria 3467
79 Ga0105243_10009885 3300009148 Bacteria 7255
80 Ga0105241_10000640 3300009174 Bacteria 26271
81 Ga0105248_10000002 3300009177 Bacteria 1054120
82 Ga0105248_10003216 3300009177 Bacteria 18117
83 Ga0105248_10005205 3300009177 Bacteria 14332
84 Ga0105248_10057135 3300009177 Bacteria 4379
85 Ga0105238_10003074 3300009551 Bacteria 16640
86 Ga0105238_10023900 3300009551 Bacteria 6229
87 Ga0105238_10031979 3300009551 Bacteria 5355
88 Ga0105238_10034433 3300009551 Bacteria 5153
89 Ga0105238_10046898 3300009551 Bacteria 4358
90 Ga0105238_10055275 3300009551 Bacteria 3985
91 Ga0105239_10005783 3300010375 Bacteria 14424
92 Ga0105239_10039738 3300010375 Bacteria 5154
93 Ga0105239_10048632 3300010375 Bacteria 4650
94 Ga0105246_10003248 3300011119 Bacteria 9862
95 Ga0157370_10013573 3300013104 Bacteria 8384
96 Ga0157370_10019597 3300013104 Bacteria 6779
97 Ga0157370_10044940 3300013104 Bacteria 4241
98 Ga0157369_10005190 3300013105 Bacteria 15225
99 Ga0157374_10000657 3300013296 Bacteria 30400
100 Ga0157374_10007929 3300013296 Bacteria 9067
101 Ga0157378_10020913 3300013297 Bacteria 5757
102 Ga0157375_10000021 3300013308 Bacteria 249616
103 Ga0157375_10002788 3300013308 Bacteria 15115
104 Ga0163163_10000059 3300014325 Bacteria 123393
105 Ga0163163_10000956 3300014325 Bacteria 24524
106 Ga0157379_10000754 3300014968 Bacteria 26186
107 Ga0157376_10000418 3300014969 Bacteria 27636
108 Ga0207710_10000503 3300025900 Bacteria 24302
109 Ga0207705_10009434 3300025909 Bacteria 7096
110 Ga0207684_10002341 3300025910 Bacteria 19203
111 Ga0207707_10000888 3300025912 Bacteria 29241
112 Ga0207707_10004405 3300025912 Bacteria 12433
113 Ga0207707_10022069 3300025912 Bacteria 5564
114 Ga0207695_10006476 3300025913 Bacteria 15197
115 Ga0207695_10006557 3300025913 Bacteria 15069
116 Ga0207695_10022663 3300025913 Bacteria 7120
117 Ga0207695_10046807 3300025913 Bacteria 4582
118 Ga0207671_10001365 3300025914 Bacteria 28498
119 Ga0207671_10008763 3300025914 Bacteria 8521
120 Ga0207652_10012679 3300025921 Bacteria 6816
121 Ga0207652_10023290 3300025921 Bacteria 5129
122 Ga0207646_10006810 3300025922 Bacteria 11754
123 Ga0207694_10008942 3300025924 Bacteria 7562
124 Ga0207694_10009112 3300025924 Bacteria 7490
125 Ga0207694_10011505 3300025924 Bacteria 6679
126 Ga0207694_10016363 3300025924 Bacteria 5599
127 Ga0207694_10026413 3300025924 Bacteria 4417
128 Ga0207694_10032341 3300025924 Bacteria 4003
129 Ga0207650_10002881 3300025925 Bacteria 11881
130 Ga0207644_10000898 3300025931 Bacteria 18841
131 Ga0207644_10005958 3300025931 Bacteria 7949
132 Ga0207691_10014191 3300025940 Bacteria 7601
133 Ga0207711_10000023 3300025941 Bacteria 327296
134 Ga0207711_10015111 3300025941 Bacteria 6411
135 Ga0207689_10001447 3300025942 Bacteria 22699
136 Ga0207661_10000011 3300025944 Bacteria 361200
137 Ga0207661_10006422 3300025944 Bacteria 8314
138 Ga0207661_10045412 3300025944 Bacteria 3478
139 Ga0207667_10011517 3300025949 Bacteria 10276
140 Ga0207667_10022339 3300025949 Bacteria 6991
141 Ga0207667_10023156 3300025949 Bacteria 6840
142 Ga0207658_10001188 3300025986 Bacteria 20777
143 Ga0207702_10022382 3300026078 Bacteria 5240
144 Ga0207641_10005175 3300026088 Bacteria 11148
145 Ga0207641_10007926 3300026088 Bacteria 8809
146 Ga0207641_10030820 3300026088 Bacteria 4444
147 Ga0207675_100054034 3300026118 Bacteria 3747
148 Ga0207428_10020639 3300027907 Bacteria 5591
149 Ga0268266_10002048 3300028379 Bacteria 22352
150 Ga0268266_10004705 3300028379 Bacteria 12991
151 Ga0265338_10003047 3300028800 Bacteria 24109
152 Ga0265338_10008889 3300028800 Bacteria 12101
153 Ga0265332_10013359 3300031238 Bacteria 3640
154 Ga0265325_10007978 3300031241 Bacteria 6284
155 Ga0265329_10000804 3300031242 Bacteria 15951
156 Ga0307509_10030343 3300031507 Bacteria 5982
157 Ga0307408_100007371 3300031548 Bacteria 7282
158 Ga0265314_10001119 3300031711 Bacteria 30990
159 Ga0265314_10001721 3300031711 Bacteria 23731
160 Ga0307516_10000209 3300031730 Bacteria 75193
161 Ga0307416_100011248 3300032002 Bacteria 5952
162 Ga0373955_0007294 3300035172 Bacteria 5077
163 Ga0373927_0000847 3300035695 Bacteria 23338
164 Ga0373927_0006637 3300035695 Bacteria 7876
165 Ga0373937_0013067 3300036401 Bacteria 7313
166 Ga0451577_0000985 3300042876 Bacteria 41440
167 Ga0451577_0001242 3300042876 Bacteria 35296
168 Ga0466969_0000410 3300044656 Bacteria 23580
169 Ga0466966_0001875 3300044684 Bacteria 13643
170 Ga0466961_0000440 3300044693 Bacteria 26496
171 Ga0466961_0026846 3300044693 Bacteria 3703
172 Ga0466964_0001452 3300044706 Bacteria 8105
173 Ga0453684_0000684 3300044712 Bacteria 120768
174 Ga0453684_0008282 3300044712 Bacteria 18731
175 Ga0466971_0002632 3300044719 Bacteria 7596
176 Ga0466970_0011119 3300044765 Bacteria 4584
177 Ga0466959_0011216 3300045049 Bacteria 6428
178 Ga0466959_0016025 3300045049 Bacteria 5470
179 Ga0495592_0000008 3300046454 Bacteria 175382
180 Ga0495603_0008725 3300046455 Bacteria 6129
181 Ga0495603_0031342 3300046455 Bacteria 3201
182 Ga0495629_0003896 3300046459 Bacteria 11233
183 Ga0495653_0019252 3300046463 Bacteria 5536
184 Ga0495650_0000022 3300046471 Bacteria 530747
185 Ga0495580_0012276 3300046472 Bacteria 6577
186 Ga0495639_0000767 3300046475 Bacteria 14608
187 Ga0495662_0007620 3300046476 Bacteria 5341
188 Ga0495664_0000382 3300046477 Bacteria 21572
189 Ga0495664_0009444 3300046477 Bacteria 5457
190 Ga0495664_0019094 3300046477 Bacteria 3937
191 Ga0495594_0000511 3300046499 Bacteria 19785
192 Ga0495594_0000517 3300046499 Bacteria 19749
193 Ga0495606_0033794 3300046507 Bacteria 3521
194 Ga0495628_0000166 3300046516 Bacteria 57276
195 Ga0495628_0004043 3300046516 Bacteria 13046
196 Ga0495628_0011478 3300046516 Bacteria 7488
197 Ga0495630_0000181 3300046517 Bacteria 48934
198 Ga0495630_0011663 3300046517 Bacteria 6369
199 Ga0495644_0001229 3300046523 Bacteria 10486
200 Ga0495652_0008235 3300046529 Bacteria 9529
201 Ga0495640_0002305 3300046533 Bacteria 15311
202 Ga0495586_0000001 3300046535 Bacteria 231314
203 Ga0495586_0000418 3300046535 Bacteria 25772
204 Ga0495586_0001624 3300046535 Bacteria 12326
205 Ga0495645_0001505 3300046543 Bacteria 15750
206 Ga0495645_0008064 3300046543 Bacteria 7337
207 Ga0495634_0004862 3300046642 Bacteria 10417
208 Ga0495634_0033417 3300046642 Bacteria 3535
209 Ga0495625_0000485 3300046660 Bacteria 59490
210 Ga0495635_0001357 3300046663 Bacteria 16273
211 Ga0495599_0003211 3300046678 Bacteria 9525
212 Ga0495599_0015308 3300046678 Bacteria 4759
213 Ga0495599_0019798 3300046678 Bacteria 4191
214 Ga0495599_0021235 3300046678 Bacteria 4049
215 Ga0495646_0005392 3300046680 Bacteria 8075
216 Ga0495613_0001311 3300046689 Bacteria 18987
217 Ga0495613_0008264 3300046689 Bacteria 7725
218 Ga0495624_0005585 3300046690 Bacteria 9044
219 Ga0495600_0001444 3300046809 Bacteria 13165
220 Ga0495600_0036387 3300046809 Bacteria 3199
221 Ga0495604_0006776 3300047317 Bacteria 9087
222 Ga0495674_0001914 3300047319 Bacteria 20555
223 Ga0495674_0009751 3300047319 Bacteria 9118
224 Ga0495674_0016197 3300047319 Bacteria 6955
225 Ga0495672_0000255 3300047320 Bacteria 74469
226 Ga0495676_0006961 3300047321 Bacteria 10377
227 Ga0495676_0008459 3300047321 Bacteria 9432
228 Ga0495680_0004710 3300047322 Bacteria 12973
229 Ga0495686_0001003 3300047472 Bacteria 34324
230 Ga0496109_0005320 3300048912 Bacteria 10761
231 Ga0496112_0000465 3300048915 Bacteria 27050
232 Ga0496114_0001448 3300048917 Bacteria 17998
233 Ga0496126_0000020 3300048929 Bacteria 490805
234 Ga0496126_0000187 3300048929 Bacteria 139670
235 Ga0496126_0001809 3300048929 Bacteria 31307
236 Ga0501034_0038866 3300049571 Bacteria 4820
237 nmdc:mga05p37_113693_c1 3300050507 Bacteria 3328
238 nmdc:mga06r32_20486_c1 3300050510 Bacteria 6090
239 nmdc:mga08y16_17000_c1 3300050511 Bacteria 7660
240 nmdc:mga0rr50_35949_c1 3300050513 Bacteria 3562
241 nmdc:mga08x19_4143_c1 3300050514 Bacteria 8599
242 nmdc:mga08x19_624_c1 3300050514 Bacteria 22809
243 nmdc:mga0a205_12938_c1 3300050515 Bacteria 7742
244 nmdc:mga0a205_40817_c1 3300050515 Bacteria 4468
245 nmdc:mga0a205_8324_c1 3300050515 Bacteria 9432
246 Ga0500651_0000004 3300053093 Bacteria 389879
247 Ga0500641_0002195 3300053096 Bacteria 6908
248 Ga0500595_000007 3300053119 Bacteria 289461
249 Ga0500595_002061 3300053119 Bacteria 10268
250 Ga0501082_0001150 3300060353 Bacteria 23338
251 Ga0466962_0000053 3300061719 Bacteria 47290

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046455 Ga0495603_0031342 Ga0495603_0031342_571_3186 869
2 3300053096 Ga0500641_0002195 Ga0500641_0002195_2148_5309 973
3 3300045049 Ga0466959_0011216 Ga0466959_0011216_79_3066 985
4 3300003320 rootH2_10046803 rootH2_100468033 993
5 3300009093 Ga0105240_10022468 Ga0105240_100224681 1002
6 3300050514 nmdc:mga08x19_4143_c1 nmdc:mga08x19_4143_c1_4726_7884 1002
7 3300010375 Ga0105239_10048632 Ga0105239_100486324 1006
8 3300013308 Ga0157375_10000021 Ga0157375_10000021115 1006
9 3300009093 Ga0105240_10000836 Ga0105240_1000083635 1007
10 3300005985 Ga0081539_10003027 Ga0081539_1000302711 1008
11 3300035695 Ga0373927_0006637 Ga0373927_0006637_3851_6952 1010
12 3300046472 Ga0495580_0012276 Ga0495580_0012276_1251_4352 1010
13 3300005434 Ga0070709_10004116 Ga0070709_100041163 1013
14 3300042876 Ga0451577_0000985 Ga0451577_0000985_15257_18442 1013
15 3300042876 Ga0451577_0001242 Ga0451577_0001242_12368_15466 1013
16 3300044712 Ga0453684_0008282 Ga0453684_0008282_1203_4388 1013
17 3300014325 Ga0163163_10000059 Ga0163163_1000005958 1014
18 3300031507 Ga0307509_10030343 Ga0307509_100303431 1015
19 3300013104 Ga0157370_10019597 Ga0157370_100195973 1016
20 3300046499 Ga0495594_0000517 Ga0495594_0000517_9516_12662 1016
21 3300046689 Ga0495613_0008264 Ga0495613_0008264_556_3702 1016
22 3300031238 Ga0265332_10013359 Ga0265332_100133591 1017
23 3300031242 Ga0265329_10000804 Ga0265329_100008049 1017
24 3300031711 Ga0265314_10001119 Ga0265314_1000111911 1017
25 3300044656 Ga0466969_0000410 Ga0466969_0000410_3822_6935 1017
26 3300044684 Ga0466966_0001875 Ga0466966_0001875_10345_13458 1017
27 3300044693 Ga0466961_0000440 Ga0466961_0000440_16646_19759 1017
28 3300044706 Ga0466964_0001452 Ga0466964_0001452_72_3185 1017
29 3300044719 Ga0466971_0002632 Ga0466971_0002632_46_3159 1017
30 3300044765 Ga0466970_0011119 Ga0466970_0011119_1184_4297 1017
31 3300061719 Ga0466962_0000053 Ga0466962_0000053_23215_26328 1017
32 3300009093 Ga0105240_10003789 Ga0105240_100037898 1018
33 3300009147 Ga0114129_10007722 Ga0114129_100077224 1018
34 3300009551 Ga0105238_10031979 Ga0105238_100319792 1018
35 3300025924 Ga0207694_10026413 Ga0207694_100264132 1018
36 3300005355 Ga0070671_100001519 Ga0070671_1000015196 1019
37 3300013296 Ga0157374_10000657 Ga0157374_1000065717 1019
38 3300025931 Ga0207644_10000898 Ga0207644_100008989 1019
39 3300026088 Ga0207641_10007926 Ga0207641_100079265 1019
40 3300026118 Ga0207675_100054034 Ga0207675_1000540342 1020
41 3300053119 Ga0500595_000007 Ga0500595_000007_142701_145847 1021
42 3300009093 Ga0105240_10004130 Ga0105240_100041309 1022
43 3300025913 Ga0207695_10006476 Ga0207695_100064765 1022
44 3300048917 Ga0496114_0001448 Ga0496114_0001448_8685_11816 1022
45 3300036401 Ga0373937_0013067 Ga0373937_0013067_4169_7300 1023
46 3300005548 Ga0070665_100031994 Ga0070665_1000319943 1024
47 3300009094 Ga0111539_10029736 Ga0111539_100297362 1024
48 3300025949 Ga0207667_10022339 Ga0207667_100223392 1024
49 3300028800 Ga0265338_10003047 Ga0265338_1000304711 1024
50 3300048929 Ga0496126_0000020 Ga0496126_0000020_452294_455440 1024
51 3300050510 nmdc:mga06r32_20486_c1 nmdc:mga06r32_20486_c1_651_3755 1024
52 3300028379 Ga0268266_10004705 Ga0268266_100047056 1025
53 3300046471 Ga0495650_0000022 Ga0495650_0000022_287421_290567 1025
54 3300048929 Ga0496126_0000187 Ga0496126_0000187_110413_113559 1025
55 3300005458 Ga0070681_10018084 Ga0070681_100180843 1026
56 3300005530 Ga0070679_100029814 Ga0070679_1000298141 1026
57 3300005563 Ga0068855_100015756 Ga0068855_1000157562 1026
58 3300009551 Ga0105238_10003074 Ga0105238_1000307411 1026
59 3300010375 Ga0105239_10039738 Ga0105239_100397381 1026
60 3300013104 Ga0157370_10013573 Ga0157370_100135732 1026
61 3300025912 Ga0207707_10000888 Ga0207707_1000088827 1026
62 3300025921 Ga0207652_10023290 Ga0207652_100232901 1026
63 3300025924 Ga0207694_10011505 Ga0207694_100115052 1026
64 3300028379 Ga0268266_10002048 Ga0268266_1000204815 1026
65 3300046507 Ga0495606_0033794 Ga0495606_0033794_56_3202 1026
66 3300005937 Ga0081455_10015134 Ga0081455_100151341 1027
67 3300028800 Ga0265338_10008889 Ga0265338_100088895 1027
68 3300031730 Ga0307516_10000209 Ga0307516_1000020924 1027
69 3300046477 Ga0495664_0000382 Ga0495664_0000382_5815_8928 1027
70 3300046516 Ga0495628_0011478 Ga0495628_0011478_705_3818 1027
71 3300046543 Ga0495645_0001505 Ga0495645_0001505_9018_12131 1027
72 3300046642 Ga0495634_0033417 Ga0495634_0033417_229_3342 1027
73 3300046678 Ga0495599_0019798 Ga0495599_0019798_420_3533 1027
74 3300046809 Ga0495600_0036387 Ga0495600_0036387_71_3184 1027
75 3300060353 Ga0501082_0001150 Ga0501082_0001150_4904_8002 1027
76 3300005471 Ga0070698_100017088 Ga0070698_1000170884 1028
77 3300009147 Ga0114129_10129517 Ga0114129_101295171 1028
78 3300009148 Ga0105243_10009885 Ga0105243_100098854 1028
79 3300005563 Ga0068855_100025919 Ga0068855_1000259194 1029
80 3300006844 Ga0075428_100015894 Ga0075428_1000158942 1029
81 3300027907 Ga0207428_10020639 Ga0207428_100206392 1029
82 3300050511 nmdc:mga08y16_17000_c1 nmdc:mga08y16_17000_c1_1345_4503 1029
83 3300005530 Ga0070679_100007532 Ga0070679_1000075327 1030
84 3300009093 Ga0105240_10002117 Ga0105240_100021173 1030
85 3300025912 Ga0207707_10022069 Ga0207707_100220693 1030
86 3300025913 Ga0207695_10022663 Ga0207695_100226634 1030
87 3300025921 Ga0207652_10012679 Ga0207652_100126794 1030
88 3300025949 Ga0207667_10011517 Ga0207667_100115173 1030
89 3300035172 Ga0373955_0007294 Ga0373955_0007294_288_3440 1030
90 3300048929 Ga0496126_0001809 Ga0496126_0001809_24148_27309 1030
91 3300009147 Ga0114129_10006749 Ga0114129_100067494 1031
92 3300005536 Ga0070697_100001229 Ga0070697_1000012293 1033
93 3300005563 Ga0068855_100024525 Ga0068855_1000245252 1033
94 3300013104 Ga0157370_10044940 Ga0157370_100449402 1033
95 3300025949 Ga0207667_10023156 Ga0207667_100231564 1033
96 3300049571 Ga0501034_0038866 Ga0501034_0038866_1270_4404 1033
97 3300050515 nmdc:mga0a205_12938_c1 nmdc:mga0a205_12938_c1_1918_5052 1033
98 3300005471 Ga0070698_100020665 Ga0070698_1000206653 1034
99 3300005518 Ga0070699_100002840 Ga0070699_10000284013 1034
100 3300009147 Ga0114129_10020474 Ga0114129_100204742 1034
101 3300025910 Ga0207684_10002341 Ga0207684_100023412 1034
102 3300025922 Ga0207646_10006810 Ga0207646_1000681010 1034
103 3300005329 Ga0070683_100030691 Ga0070683_1000306912 1035
104 3300005336 Ga0070680_100006483 Ga0070680_1000064835 1035
105 3300005535 Ga0070684_100016239 Ga0070684_1000162394 1035
106 3300006847 Ga0075431_100014852 Ga0075431_1000148525 1035
107 3300009093 Ga0105240_10001028 Ga0105240_1000102834 1035
108 3300009093 Ga0105240_10009834 Ga0105240_100098347 1035
109 3300013308 Ga0157375_10002788 Ga0157375_100027884 1035
110 3300031241 Ga0265325_10007978 Ga0265325_100079782 1035
111 3300009551 Ga0105238_10034433 Ga0105238_100344332 1036
112 3300046454 Ga0495592_0000008 Ga0495592_0000008_64092_67262 1036
113 3300046477 Ga0495664_0019094 Ga0495664_0019094_354_3524 1036
114 3300046516 Ga0495628_0000166 Ga0495628_0000166_38059_41229 1036
115 3300046517 Ga0495630_0011663 Ga0495630_0011663_704_3874 1036
116 3300046535 Ga0495586_0000418 Ga0495586_0000418_13261_16431 1036
117 3300046543 Ga0495645_0008064 Ga0495645_0008064_1822_4992 1036
118 3300046678 Ga0495599_0015308 Ga0495599_0015308_1085_4255 1036
119 3300047319 Ga0495674_0016197 Ga0495674_0016197_1587_4757 1036
120 3300005329 Ga0070683_100000006 Ga0070683_100000006111 1037
121 3300005535 Ga0070684_100000018 Ga0070684_100000018111 1037
122 3300006847 Ga0075431_100002471 Ga0075431_1000024718 1037
123 3300025944 Ga0207661_10000011 Ga0207661_10000011110 1037
124 3300013105 Ga0157369_10005190 Ga0157369_100051907 1038
125 3300025914 Ga0207671_10008763 Ga0207671_100087634 1038
126 3300045049 Ga0466959_0016025 Ga0466959_0016025_483_3626 1038
127 3300005563 Ga0068855_100048801 Ga0068855_1000488013 1039
128 3300031548 Ga0307408_100007371 Ga0307408_1000073712 1039
129 3300032002 Ga0307416_100011248 Ga0307416_1000112483 1039
130 3300035695 Ga0373927_0000847 Ga0373927_0000847_11052_14204 1039
131 3300050514 nmdc:mga08x19_624_c1 nmdc:mga08x19_624_c1_19168_22320 1039
132 3300005290 Ga0065712_10068305 Ga0065712_100683055 1040
133 3300005293 Ga0065715_10001114 Ga0065715_100011148 1040
134 3300005329 Ga0070683_100007573 Ga0070683_1000075735 1040
135 3300005331 Ga0070670_100000667 Ga0070670_1000006674 1040
136 3300005334 Ga0068869_100008313 Ga0068869_1000083132 1040
137 3300005367 Ga0070667_100000325 Ga0070667_1000003258 1040
138 3300005466 Ga0070685_10003623 Ga0070685_100036234 1040
139 3300005471 Ga0070698_100017077 Ga0070698_1000170774 1040
140 3300005535 Ga0070684_100000513 Ga0070684_10000051319 1040
141 3300005536 Ga0070697_100009189 Ga0070697_1000091894 1040
142 3300005543 Ga0070672_100011337 Ga0070672_1000113372 1040
143 3300005548 Ga0070665_100054306 Ga0070665_1000543062 1040
144 3300005577 Ga0068857_100000373 Ga0068857_10000037326 1040
145 3300005614 Ga0068856_100028265 Ga0068856_1000282652 1040
146 3300005617 Ga0068859_100024712 Ga0068859_1000247123 1040
147 3300005617 Ga0068859_100027574 Ga0068859_1000275743 1040
148 3300005841 Ga0068863_100009073 Ga0068863_1000090737 1040
149 3300005841 Ga0068863_100027631 Ga0068863_1000276313 1040
150 3300005843 Ga0068860_100006798 Ga0068860_1000067985 1040
151 3300006237 Ga0097621_100003239 Ga0097621_1000032394 1040
152 3300006358 Ga0068871_100000424 Ga0068871_1000004248 1040
153 3300006914 Ga0075436_100002528 Ga0075436_1000025285 1040
154 3300006931 Ga0097620_100024711 Ga0097620_1000247113 1040
155 3300006931 Ga0097620_100027573 Ga0097620_1000275733 1040
156 3300007076 Ga0075435_100006237 Ga0075435_1000062374 1040
157 3300009098 Ga0105245_10000362 Ga0105245_100003626 1040
158 3300009101 Ga0105247_10000768 Ga0105247_1000076818 1040
159 3300009147 Ga0114129_10001781 Ga0114129_1000178116 1040
160 3300009147 Ga0114129_10002204 Ga0114129_1000220412 1040
161 3300009147 Ga0114129_10023283 Ga0114129_100232832 1040
162 3300009147 Ga0114129_10030761 Ga0114129_100307615 1040
163 3300009174 Ga0105241_10000640 Ga0105241_1000064021 1040
164 3300009177 Ga0105248_10003216 Ga0105248_100032168 1040
165 3300009177 Ga0105248_10005205 Ga0105248_100052054 1040
166 3300010375 Ga0105239_10005783 Ga0105239_1000578314 1040
167 3300011119 Ga0105246_10003248 Ga0105246_100032484 1040
168 3300013296 Ga0157374_10007929 Ga0157374_100079296 1040
169 3300014325 Ga0163163_10000956 Ga0163163_100009566 1040
170 3300014968 Ga0157379_10000754 Ga0157379_100007546 1040
171 3300014969 Ga0157376_10000418 Ga0157376_100004186 1040
172 3300025900 Ga0207710_10000503 Ga0207710_1000050321 1040
173 3300025913 Ga0207695_10046807 Ga0207695_100468072 1040
174 3300025914 Ga0207671_10001365 Ga0207671_1000136518 1040
175 3300025924 Ga0207694_10009112 Ga0207694_100091122 1040
176 3300025925 Ga0207650_10002881 Ga0207650_100028816 1040
177 3300025931 Ga0207644_10005958 Ga0207644_100059582 1040
178 3300025940 Ga0207691_10014191 Ga0207691_100141913 1040
179 3300025941 Ga0207711_10015111 Ga0207711_100151113 1040
180 3300025942 Ga0207689_10001447 Ga0207689_100014479 1040
181 3300025944 Ga0207661_10006422 Ga0207661_100064222 1040
182 3300025986 Ga0207658_10001188 Ga0207658_1000118820 1040
183 3300026078 Ga0207702_10022382 Ga0207702_100223822 1040
184 3300026088 Ga0207641_10005175 Ga0207641_100051754 1040
185 3300026088 Ga0207641_10030820 Ga0207641_100308201 1040
186 3300044693 Ga0466961_0026846 Ga0466961_0026846_282_3425 1040
187 3300046455 Ga0495603_0008725 Ga0495603_0008725_2072_5215 1040
188 3300046499 Ga0495594_0000511 Ga0495594_0000511_12813_15956 1040
189 3300046523 Ga0495644_0001229 Ga0495644_0001229_1929_5072 1040
190 3300048912 Ga0496109_0005320 Ga0496109_0005320_35_3190 1040
191 3300048915 Ga0496112_0000465 Ga0496112_0000465_3224_6379 1040
192 3300050507 nmdc:mga05p37_113693_c1 nmdc:mga05p37_113693_c1_73_3228 1040
193 3300050515 nmdc:mga0a205_8324_c1 nmdc:mga0a205_8324_c1_6097_9252 1040
194 3300053119 Ga0500595_002061 Ga0500595_002061_5757_8900 1040
195 3300005327 Ga0070658_10002276 Ga0070658_100022762 1041
196 3300005339 Ga0070660_100006327 Ga0070660_1000063272 1041
197 3300005530 Ga0070679_100001343 Ga0070679_1000013436 1041
198 3300009093 Ga0105240_10006826 Ga0105240_100068263 1041
199 3300009177 Ga0105248_10000002 Ga0105248_10000002430 1041
200 3300009177 Ga0105248_10057135 Ga0105248_100571352 1041
201 3300009551 Ga0105238_10023900 Ga0105238_100239002 1041
202 3300009551 Ga0105238_10046898 Ga0105238_100468982 1041
203 3300009551 Ga0105238_10055275 Ga0105238_100552751 1041
204 3300013297 Ga0157378_10020913 Ga0157378_100209132 1041
205 3300025909 Ga0207705_10009434 Ga0207705_100094343 1041
206 3300025912 Ga0207707_10004405 Ga0207707_100044056 1041
207 3300025913 Ga0207695_10006557 Ga0207695_100065572 1041
208 3300025924 Ga0207694_10008942 Ga0207694_100089422 1041
209 3300025924 Ga0207694_10016363 Ga0207694_100163632 1041
210 3300025924 Ga0207694_10032341 Ga0207694_100323411 1041
211 3300025941 Ga0207711_10000023 Ga0207711_10000023167 1041
212 3300025944 Ga0207661_10045412 Ga0207661_100454122 1041
213 3300044712 Ga0453684_0000684 Ga0453684_0000684_78609_81773 1041
214 3300046459 Ga0495629_0003896 Ga0495629_0003896_5707_8853 1041
215 3300046463 Ga0495653_0019252 Ga0495653_0019252_1754_4900 1041
216 3300046475 Ga0495639_0000767 Ga0495639_0000767_1626_4772 1041
217 3300046476 Ga0495662_0007620 Ga0495662_0007620_1001_4147 1041
218 3300046477 Ga0495664_0009444 Ga0495664_0009444_640_3786 1041
219 3300046516 Ga0495628_0004043 Ga0495628_0004043_5367_8513 1041
220 3300046517 Ga0495630_0000181 Ga0495630_0000181_4740_7892 1041
221 3300046529 Ga0495652_0008235 Ga0495652_0008235_3215_6361 1041
222 3300046533 Ga0495640_0002305 Ga0495640_0002305_3784_6930 1041
223 3300046535 Ga0495586_0000001 Ga0495586_0000001_96875_100027 1041
224 3300046535 Ga0495586_0001624 Ga0495586_0001624_4434_7580 1041
225 3300046642 Ga0495634_0004862 Ga0495634_0004862_5358_8504 1041
226 3300046660 Ga0495625_0000485 Ga0495625_0000485_36174_39320 1041
227 3300046663 Ga0495635_0001357 Ga0495635_0001357_4952_8098 1041
228 3300046678 Ga0495599_0003211 Ga0495599_0003211_1895_5041 1041
229 3300046678 Ga0495599_0021235 Ga0495599_0021235_696_3851 1041
230 3300046680 Ga0495646_0005392 Ga0495646_0005392_3862_7008 1041
231 3300046689 Ga0495613_0001311 Ga0495613_0001311_959_4105 1041
232 3300046690 Ga0495624_0005585 Ga0495624_0005585_3253_6399 1041
233 3300046809 Ga0495600_0001444 Ga0495600_0001444_6209_9355 1041
234 3300047317 Ga0495604_0006776 Ga0495604_0006776_2519_5665 1041
235 3300047319 Ga0495674_0001914 Ga0495674_0001914_11620_14772 1041
236 3300047319 Ga0495674_0009751 Ga0495674_0009751_4943_8089 1041
237 3300047320 Ga0495672_0000255 Ga0495672_0000255_420_3566 1041
238 3300047321 Ga0495676_0006961 Ga0495676_0006961_5150_8296 1041
239 3300047321 Ga0495676_0008459 Ga0495676_0008459_3538_6690 1041
240 3300047322 Ga0495680_0004710 Ga0495680_0004710_4729_7875 1041
241 3300047472 Ga0495686_0001003 Ga0495686_0001003_5671_8817 1041
242 3300050513 nmdc:mga0rr50_35949_c1 nmdc:mga0rr50_35949_c1_30_3176 1041
243 3300053093 Ga0500651_0000004 Ga0500651_0000004_194009_197149 1041
244 3300003203 JGI25406J46586_10000718 JGI25406J46586_100007183 1042
245 3300003203 JGI25406J46586_10003026 JGI25406J46586_100030264 1042
246 3300005985 Ga0081539_10000025 Ga0081539_10000025255 1042
247 3300005985 Ga0081539_10002857 Ga0081539_100028574 1042
248 3300006871 Ga0075434_100023228 Ga0075434_1000232284 1042
249 3300009147 Ga0114129_10000152 Ga0114129_1000015237 1042
250 3300031711 Ga0265314_10001721 Ga0265314_1000172113 1042
251 3300050515 nmdc:mga0a205_40817_c1 nmdc:mga0a205_40817_c1_996_4124 1042

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

43

1067

0.94

PF03176

MMPL

MMPL family

816

1080

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4k0e-assembly1.cif.gz_A x-ray crystal structure of a heavy metal efflux pump, crystal form ii 0.9261 4 1026
4k0e-assembly1.cif.gz_A x-ray crystal structure of a heavy metal efflux pump, crystal form ii 0.9233 4 1026
4k0j-assembly2.cif.gz_D x-ray crystal structure of a heavy metal efflux pump, crystal form i 0.9204 3 1022
7rr6-assembly1.cif.gz_C multidrug efflux pump subunit acrb 0.92 7 1028
4k0e-assembly1.cif.gz_C x-ray crystal structure of a heavy metal efflux pump, crystal form ii 0.9192 3 1024
ID Description Score Start End Superfamily
af_Q2FVZ5_891_1052_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9661 873 1022 1.20.1640.10
3w9iC05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.961 876 1024 1.20.1640.10
af_P24177_305_504_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9564 299 490 1.20.1640.10
af_P24181_868_1032_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.953 872 1025 1.20.1640.10
af_P37637_331_506_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9509 325 495 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A3N5PMP8-F1-model_v4 Acriflavine resistance protein B 0.9676 884 1022 GO:0005886
GO:0042910
AF-A0A2M7KMU7-F1-model_v4 Efflux RND transporter permease subunit 0.9671 880 1025 GO:0005886
GO:0042910
AF-A0A2R7S2T7-F1-model_v4 deleted 0.9657 876 1028
AF-A0A7C2PBR1-F1-model_v4 Acriflavine resistance protein B 0.9607 881 1025 GO:0005886
GO:0042910
AF-A0A523LNL0-F1-model_v4 Efflux RND transporter permease subunit 0.95 865 1024 GO:0005886
GO:0042910

Feature Viewer

pLDDT pTM Quality
84.44 0.78 High
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Predicted Structure (AlphaFold2)

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