F362803

General Info

Members Datasets Scaffolds Average Seq Length
251 195 216 401

Family's Representative Sequence

Representative Sequence 3300053098|Ga0500650_0028797|Ga0500650_0028797_357_1667
Length 436
Sequence MLRRCFDKRSAALRGVTFAWGAGRREKYSDSMLNSSDRIQTTHAGSLPRTPELIAANEAREFEADGFTFTRTEEFDRLEGAAVADLVARQKAIGITVPGDGEYGKAMSSAVDYGAWWSYSFQRVAGLSIEGSNIFSAPPVRSTPGNVQLTSFTDRRDRGLFADAYADGVEAGSIATPFPSTTGPLSYVGHEAIANDIANLKNGLAASGLTEGFITSLSPGSGSRVINEYYATEEEHIWAWADALREEYTAIIDAGLILQIDDPSIAENWDQINPEPSIEDYRAFTRIRVEALNYALRDLPEDRIRFHLCWGSWHGPHTTDIELKHIVDLMLEINAGAYSFEAANARHEHEWRVWEDVKLPEGKLILPGIVGHATNVVEHPELVAERIGRFASLVGRENVIASTDCGLGGRIHPQIAVAKLETLARGAELASERLWK

Samples

Sample ID Description Type Environment
1 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
2 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
3 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
4 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
5 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
6 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
7 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
8 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
9 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
10 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
11 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
12 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
13 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
14 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
15 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
16 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
17 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
18 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
19 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
20 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
21 2920879853 Kocuria salina CV6 Isolate Unclassified
22 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
23 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
24 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
25 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
26 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
27 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
28 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
29 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
30 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
31 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
32 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
33 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
34 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
35 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
36 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
37 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
38 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
39 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
44 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
45 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
46 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
78 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
79 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
80 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
81 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
84 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
85 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
96 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
102 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
103 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
112 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
113 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
122 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
128 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
136 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
137 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
144 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
145 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
151 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
152 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
172 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
186 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
187 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
188 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
189 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
190 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
191 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
194 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
195 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.86
Metatranscriptomes 1.2
Isolates 13.94

Biome Distribution

Category Percentage (%)
Aerial Root 0.4
Bulb 0
Endosphere 3.19
Nodule 0
Rhizoplane 10.36
Rhizosphere 75.3
Stem 0
Stem Tuber 0
Unclassified 10.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1002592 3300000549 Bacteria 2494
2 LJQas_1002750 3300000549 Bacteria 2419
3 Ga0055542_1003128 3300003762 Bacteria 4718
4 Ga0065714_10067176 3300005288 Bacteria 5806
5 Ga0065714_10131302 3300005288 Bacteria 1248
6 Ga0070658_10000396 3300005327 Bacteria 37928
7 Ga0070676_10043752 3300005328 Bacteria 2603
8 Ga0070683_100343841 3300005329 Bacteria 1421
9 Ga0070675_100017270 3300005354 Bacteria 5732
10 Ga0070673_100016189 3300005364 Bacteria 5264
11 Ga0070667_100124366 3300005367 Bacteria 2246
12 Ga0070709_10056874 3300005434 Bacteria 2475
13 Ga0070714_100028733 3300005435 Bacteria 4617
14 Ga0070714_100300824 3300005435 Bacteria 1495
15 Ga0070713_100130164 3300005436 Bacteria 2218
16 Ga0070711_100053234 3300005439 Bacteria 2788
17 Ga0070663_100070573 3300005455 Bacteria 2541
18 Ga0070663_100156623 3300005455 Bacteria 1751
19 Ga0070678_100007384 3300005456 Bacteria 6515
20 Ga0070665_100086005 3300005548 Bacteria 3150
21 Ga0068857_100120126 3300005577 Bacteria 2365
22 Ga0105244_10044671 3300009036 Bacteria 2281
23 Ga0105245_10187071 3300009098 Bacteria 1982
24 Ga0105246_10012899 3300011119 Bacteria 5228
25 Ga0105246_10016859 3300011119 Bacteria 4634
26 Ga0157371_10056979 3300013102 Bacteria 2771
27 Ga0157370_10005838 3300013104 Bacteria 13750
28 Ga0157370_10031373 3300013104 Bacteria 5199
29 Ga0157369_10114134 3300013105 Bacteria 2869
30 Ga0163162_10198728 3300013306 Bacteria 2134
31 Ga0197907_10704686 3300020069 Bacteria 1600
32 Ga0206352_10644198 3300020078 Bacteria 1700
33 Ga0209148_1008284 3300025254 Bacteria 2097
34 Ga0207697_10010013 3300025315 Bacteria 4071
35 Ga0207655_1036573 3300025728 Bacteria 2175
36 Ga0207713_1024813 3300025735 Bacteria 2783
37 Ga0207682_10005167 3300025893 Bacteria 5347
38 Ga0207699_10004323 3300025906 Bacteria 6796
39 Ga0207645_10000768 3300025907 Bacteria 26717
40 Ga0207705_10000006 3300025909 Bacteria 657147
41 Ga0207700_10037107 3300025928 Bacteria 3526
42 Ga0207664_10005921 3300025929 Bacteria 8365
43 Ga0207665_10007625 3300025939 Bacteria 7147
44 Ga0207691_10006097 3300025940 Bacteria 11652
45 Ga0207711_10067873 3300025941 Bacteria 3087
46 Ga0207668_10109166 3300025972 Bacteria 2072
47 Ga0207658_10021186 3300025986 Bacteria 4508
48 Ga0207678_10014626 3300026067 Bacteria 6905
49 Ga0207678_10090497 3300026067 Bacteria 2615
50 Ga0207702_10312270 3300026078 Bacteria 1495
51 Ga0207683_10114990 3300026121 Bacteria 2412
52 Ga0268266_10232135 3300028379 Bacteria 1700
53 Ga0265337_1000230 3300028556 Bacteria 30116
54 Ga0265326_10003952 3300028558 Bacteria 4809
55 Ga0265319_1004087 3300028563 Bacteria 7345
56 Ga0265334_10001925 3300028573 Bacteria 9854
57 Ga0265322_10016370 3300028654 Bacteria 2140
58 Ga0265338_10003750 3300028800 Bacteria 21109
59 Ga0265324_10005777 3300029957 Bacteria 5266
60 Ga0265763_1000261 3300030763 Bacteria 2944
61 Ga0265332_10002484 3300031238 Bacteria 9384
62 Ga0265320_10032809 3300031240 Bacteria 2655
63 Ga0265325_10028049 3300031241 Bacteria 3038
64 Ga0265340_10009174 3300031247 Bacteria 5317
65 Ga0265339_10022603 3300031249 Bacteria 3643
66 Ga0265316_10052939 3300031344 Bacteria 3182
67 Ga0307408_100125017 3300031548 Bacteria 1998
68 Ga0265313_10029017 3300031595 Bacteria 2867
69 Ga0265314_10026536 3300031711 Bacteria 4351
70 Ga0265342_10001496 3300031712 Bacteria 21649
71 Ga0307405_10013900 3300031731 Bacteria 4309
72 Ga0307405_10070736 3300031731 Bacteria 2242
73 Ga0307405_10099894 3300031731 Bacteria 1943
74 Ga0307410_10042255 3300031852 Bacteria 3012
75 Ga0307412_10008808 3300031911 Bacteria 5777
76 Ga0307412_10125232 3300031911 Bacteria 1857
77 Ga0307409_100035892 3300031995 Bacteria 3637
78 Ga0307409_100045255 3300031995 Bacteria 3321
79 Ga0307409_100336556 3300031995 Bacteria 1418
80 Ga0307416_100228532 3300032002 Bacteria 1791
81 Ga0307416_100320586 3300032002 Bacteria 1551
82 Ga0307416_100330719 3300032002 Bacteria 1531
83 Ga0307416_100339453 3300032002 Bacteria 1514
84 Ga0307411_10054772 3300032005 Bacteria 2621
85 Ga0307411_10103393 3300032005 Bacteria 2021
86 Ga0307411_10156889 3300032005 Bacteria 1699
87 Ga0316214_1000763 3300033545 Bacteria 3464
88 Ga0373934_0007432 3300035086 Bacteria 4068
89 Ga0373934_0042676 3300035086 Bacteria 1792
90 Ga0373923_0008155 3300035111 Bacteria 3721
91 Ga0373953_0004354 3300035117 Bacteria 4507
92 Ga0373954_0022137 3300035118 Bacteria 2881
93 Ga0373937_0015300 3300036401 Bacteria 6784
94 Ga0373925_0000043 3300037068 Bacteria 134268
95 Ga0395899_0007505 3300037312 Bacteria 8426
96 Ga0395899_0031524 3300037312 Bacteria 3983
97 Ga0395900_0092570 3300037418 Bacteria 3106
98 Ga0395898_0006173 3300037466 Bacteria 12834
99 Ga0395898_0111705 3300037466 Bacteria 2619
100 Ga0395898_0321346 3300037466 Bacteria 1476
101 Ga0395898_0483237 3300037466 Bacteria 1178
102 Ga0439442_001144 3300042002 Bacteria 5302
103 Ga0439442_019712 3300042002 Bacteria 1396
104 Ga0439442_019741 3300042002 Bacteria 1395
105 Ga0450907_001756 3300042146 Bacteria 4483
106 Ga0439434_0025607 3300042435 Bacteria 1780
107 Ga0466970_0079782 3300044765 Bacteria 1767
108 Ga0466960_0049596 3300044901 Bacteria 2021
109 Ga0466958_0120493 3300045836 Bacteria 1642
110 Ga0466967_0231105 3300045976 Bacteria 1761
111 Ga0495592_0039278 3300046454 Bacteria 3556
112 Ga0495629_0044926 3300046459 Bacteria 3100
113 Ga0495653_0026877 3300046463 Bacteria 4610
114 Ga0495653_0031941 3300046463 Bacteria 4183
115 Ga0495582_0022761 3300046473 Bacteria 3428
116 Ga0495639_0001001 3300046475 Bacteria 12755
117 Ga0495662_0025914 3300046476 Bacteria 2832
118 Ga0495664_0000638 3300046477 Bacteria 17858
119 Ga0495664_0050310 3300046477 Bacteria 2474
120 Ga0495594_0043561 3300046499 Bacteria 2460
121 Ga0495608_0026215 3300046511 Bacteria 3975
122 Ga0495628_0082734 3300046516 Bacteria 2493
123 Ga0495631_0006860 3300046518 Bacteria 5842
124 Ga0495642_0010456 3300046528 Bacteria 3555
125 Ga0495642_0073359 3300046528 Bacteria 1434
126 Ga0495665_0000808 3300046531 Bacteria 16416
127 Ga0495665_0018324 3300046531 Bacteria 3762
128 Ga0495640_0138317 3300046533 Bacteria 1571
129 Ga0495586_0002235 3300046535 Bacteria 10526
130 Ga0495586_0005802 3300046535 Bacteria 6602
131 Ga0495587_0002713 3300046536 Bacteria 11814
132 Ga0495587_0022467 3300046536 Bacteria 3884
133 Ga0495645_0000495 3300046543 Bacteria 27241
134 Ga0495645_0034150 3300046543 Bacteria 3712
135 Ga0495633_0029079 3300046558 Bacteria 2689
136 Ga0495667_0000098 3300046559 Bacteria 62781
137 Ga0495667_0033210 3300046559 Bacteria 3453
138 Ga0495667_0041293 3300046559 Bacteria 3060
139 Ga0495656_0007722 3300046615 Bacteria 3816
140 Ga0495634_0023975 3300046642 Bacteria 4285
141 Ga0495635_0013125 3300046663 Bacteria 5800
142 Ga0495588_0002175 3300046674 Bacteria 8389
143 Ga0495588_0013587 3300046674 Bacteria 3882
144 Ga0495588_0014156 3300046674 Bacteria 3814
145 Ga0495588_0034302 3300046674 Bacteria 2568
146 Ga0495599_0026503 3300046678 Bacteria 3633
147 Ga0495623_0049119 3300046679 Bacteria 2674
148 Ga0495646_0037931 3300046680 Bacteria 2978
149 Ga0495670_0002008 3300046691 Bacteria 10012
150 Ga0495600_0024993 3300046809 Bacteria 3848
151 Ga0495581_0024684 3300047315 Bacteria 3484
152 Ga0495604_0102480 3300047317 Bacteria 2101
153 Ga0495636_0008637 3300047318 Bacteria 4019
154 Ga0495680_0056181 3300047322 Bacteria 3048
155 Ga0495675_0011481 3300047444 Bacteria 5560
156 Ga0495681_0049300 3300047470 Bacteria 1991
157 Ga0495684_0056422 3300047471 Bacteria 2994
158 Ga0495602_0045770 3300048088 Bacteria 3957
159 Ga0496100_0023085 3300048903 Bacteria 3773
160 Ga0496101_0026223 3300048904 Bacteria 4051
161 Ga0496102_0013111 3300048905 Bacteria 7170
162 Ga0496102_0125629 3300048905 Bacteria 2397
163 Ga0496102_0137637 3300048905 Bacteria 2288
164 Ga0496102_0158635 3300048905 Bacteria 2127
165 Ga0496102_0226759 3300048905 Bacteria 1762
166 Ga0496103_0038679 3300048906 Bacteria 2928
167 Ga0496103_0039670 3300048906 Bacteria 2893
168 Ga0496103_0066353 3300048906 Bacteria 2252
169 Ga0496106_0020718 3300048909 Bacteria 4879
170 Ga0496106_0034447 3300048909 Bacteria 3782
171 Ga0496106_0150342 3300048909 Bacteria 1836
172 Ga0496107_0059975 3300048910 Bacteria 2753
173 Ga0496107_0257061 3300048910 Bacteria 1300
174 Ga0496108_0203397 3300048911 Bacteria 1718
175 Ga0496108_0215199 3300048911 Bacteria 1668
176 Ga0496108_0441750 3300048911 Bacteria 1136
177 Ga0496109_0017945 3300048912 Bacteria 6213
178 Ga0496110_0062357 3300048913 Bacteria 3292
179 Ga0496110_0105890 3300048913 Bacteria 2523
180 Ga0496111_0075158 3300048914 Bacteria 2462
181 Ga0496112_0044173 3300048915 Bacteria 4366
182 Ga0496112_0094485 3300048915 Bacteria 2960
183 Ga0496114_0044107 3300048917 Bacteria 3699
184 Ga0496115_0005608 3300048918 Bacteria 9138
185 Ga0496117_0050719 3300048920 Bacteria 2940
186 Ga0496118_0021364 3300048921 Bacteria 5699
187 Ga0496119_0016929 3300048922 Bacteria 5516
188 Ga0496122_0000515 3300048925 Bacteria 79995
189 Ga0496122_0001571 3300048925 Bacteria 35970
190 Ga0496122_0109189 3300048925 Bacteria 1822
191 Ga0496123_0000119 3300048926 Bacteria 159742
192 Ga0496124_0001707 3300048927 Bacteria 31025
193 Ga0496124_0017205 3300048927 Bacteria 6824
194 Ga0496125_0000046 3300048928 Bacteria 295288
195 Ga0496125_0035854 3300048928 Bacteria 4342
196 Ga0496126_0024494 3300048929 Bacteria 5826
197 Ga0501032_0101375 3300049569 Bacteria 1907
198 Ga0501033_0216689 3300049570 Bacteria 1364
199 Ga0501034_0057521 3300049571 Bacteria 3909
200 Ga0501036_0183050 3300049572 Bacteria 1763
201 Ga0501037_0144554 3300049573 Bacteria 1701
202 Ga0501038_0072819 3300049574 Bacteria 2911
203 Ga0501038_0092874 3300049574 Bacteria 2526
204 Ga0501039_0104071 3300049575 Bacteria 2216
205 Ga0501043_0158636 3300049579 Bacteria 1768
206 Ga0501047_0043164 3300049581 Bacteria 4355
207 Ga0501048_0054009 3300049582 Bacteria 2854
208 Ga0501073_0025870 3300049589 Bacteria 4204
209 Ga0501044_0037693 3300049823 Bacteria 5052
210 Ga0495601_0036807 3300053077 Bacteria 3058
211 Ga0500650_0028797 3300053098 Bacteria 2511
212 Ga0500559_0000800 3300053136 Bacteria 20562
213 Ga0500559_0022093 3300053136 Bacteria 2698
214 Ga0500573_0045356 3300053140 Bacteria 2534
215 Ga0500577_0025519 3300053142 Bacteria 2001
216 Ga0500616_0017940 3300053153 Bacteria 4007

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048905 Ga0496102_0226759 Ga0496102_0226759_197_1249 333
2 3300005354 Ga0070675_100017270 Ga0070675_1000172701 351
3 3300005455 Ga0070663_100070573 Ga0070663_1000705732 351
4 3300026067 Ga0207678_10090497 Ga0207678_100904972 351
5 3300037466 Ga0395898_0483237 Ga0395898_0483237_18_1091 356
6 3300042002 Ga0439442_019712 Ga0439442_019712_86_1159 357
7 3300048911 Ga0496108_0441750 Ga0496108_0441750_51_1124 357
8 3300035086 Ga0373934_0042676 Ga0373934_0042676_376_1554 366
9 3300046559 Ga0495667_0041293 Ga0495667_0041293_494_1672 366
10 3300048920 Ga0496117_0050719 Ga0496117_0050719_1411_2601 371
11 3300048921 Ga0496118_0021364 Ga0496118_0021364_1224_2414 371
12 3300048922 Ga0496119_0016929 Ga0496119_0016929_2588_3778 371
13 3300048925 Ga0496122_0000515 Ga0496122_0000515_14340_15530 371
14 3300048928 Ga0496125_0000046 Ga0496125_0000046_112097_113287 371
15 3300049570 Ga0501033_0216689 Ga0501033_0216689_130_1338 385
16 3300048915 Ga0496112_0044173 Ga0496112_0044173_1017_2243 390
17 iso_pu_bacteria 2995726249 2995729099 390
18 iso_pu_bacteria 8055034563 8055034645 390
19 iso_pu_bacteria 8055037949 8055040394 390
20 3300049574 Ga0501038_0092874 Ga0501038_0092874_646_1872 391
21 3300049581 Ga0501047_0043164 Ga0501047_0043164_956_2182 391
22 3300049582 Ga0501048_0054009 Ga0501048_0054009_195_1421 391
23 3300049589 Ga0501073_0025870 Ga0501073_0025870_1282_2508 391
24 3300049823 Ga0501044_0037693 Ga0501044_0037693_1396_2622 391
25 iso_pu_bacteria 2848551377 2848552076 391
26 iso_pu_bacteria 2893684298 2893685523 391
27 3300005548 Ga0070665_100086005 Ga0070665_1000860052 392
28 iso_pu_bacteria 2920879853 2920881392 392
29 3300048905 Ga0496102_0158635 Ga0496102_0158635_777_1958 393
30 iso_pu_bacteria 2862993130 2862993333 394
31 iso_pu_bacteria 2870622029 2870625161 394
32 iso_pu_bacteria 2728369276 2729905742 395
33 iso_pu_bacteria 2905926851 2905929302 395
34 3300031995 Ga0307409_100035892 Ga0307409_1000358922 396
35 3300044901 Ga0466960_0049596 Ga0466960_0049596_103_1332 396
36 3300049569 Ga0501032_0101375 Ga0501032_0101375_444_1658 397
37 3300049571 Ga0501034_0057521 Ga0501034_0057521_2126_3340 397
38 3300049572 Ga0501036_0183050 Ga0501036_0183050_321_1535 397
39 3300049573 Ga0501037_0144554 Ga0501037_0144554_239_1453 397
40 3300049574 Ga0501038_0072819 Ga0501038_0072819_1344_2558 397
41 3300049575 Ga0501039_0104071 Ga0501039_0104071_824_2038 397
42 3300049579 Ga0501043_0158636 Ga0501043_0158636_273_1487 397
43 iso_pu_bacteria 2643221632 2644183935 397
44 iso_pu_bacteria 2839986021 2839986740 397
45 iso_pu_bacteria 2919051321 2919054266 397
46 iso_pu_bacteria 2966924647 2966924908 397
47 3300005329 Ga0070683_100343841 Ga0070683_1003438411 398
48 3300005434 Ga0070709_10056874 Ga0070709_100568742 398
49 3300005435 Ga0070714_100028733 Ga0070714_1000287333 398
50 3300005435 Ga0070714_100300824 Ga0070714_1003008241 398
51 3300005436 Ga0070713_100130164 Ga0070713_1001301642 398
52 3300005439 Ga0070711_100053234 Ga0070711_1000532341 398
53 3300005455 Ga0070663_100156623 Ga0070663_1001566232 398
54 3300005577 Ga0068857_100120126 Ga0068857_1001201262 398
55 3300020069 Ga0197907_10704686 Ga0197907_107046862 398
56 3300020078 Ga0206352_10644198 Ga0206352_106441982 398
57 3300025906 Ga0207699_10004323 Ga0207699_100043232 398
58 3300025928 Ga0207700_10037107 Ga0207700_100371074 398
59 3300025929 Ga0207664_10005921 Ga0207664_100059218 398
60 3300025939 Ga0207665_10007625 Ga0207665_100076252 398
61 3300026067 Ga0207678_10014626 Ga0207678_100146266 398
62 3300026078 Ga0207702_10312270 Ga0207702_103122702 398
63 3300028556 Ga0265337_1000230 Ga0265337_10002303 398
64 3300028558 Ga0265326_10003952 Ga0265326_100039523 398
65 3300028563 Ga0265319_1004087 Ga0265319_10040872 398
66 3300028573 Ga0265334_10001925 Ga0265334_100019254 398
67 3300028654 Ga0265322_10016370 Ga0265322_100163702 398
68 3300028800 Ga0265338_10003750 Ga0265338_100037506 398
69 3300029957 Ga0265324_10005777 Ga0265324_100057772 398
70 3300030763 Ga0265763_1000261 Ga0265763_10002612 398
71 3300031238 Ga0265332_10002484 Ga0265332_100024849 398
72 3300031240 Ga0265320_10032809 Ga0265320_100328091 398
73 3300031241 Ga0265325_10028049 Ga0265325_100280491 398
74 3300031247 Ga0265340_10009174 Ga0265340_100091741 398
75 3300031249 Ga0265339_10022603 Ga0265339_100226033 398
76 3300031344 Ga0265316_10052939 Ga0265316_100529393 398
77 3300031595 Ga0265313_10029017 Ga0265313_100290173 398
78 3300031711 Ga0265314_10026536 Ga0265314_100265362 398
79 3300031712 Ga0265342_10001496 Ga0265342_1000149621 398
80 3300033545 Ga0316214_1000763 Ga0316214_10007632 398
81 3300035086 Ga0373934_0007432 Ga0373934_0007432_1737_2942 398
82 3300035111 Ga0373923_0008155 Ga0373923_0008155_1391_2596 398
83 3300035117 Ga0373953_0004354 Ga0373953_0004354_1829_3034 398
84 3300035118 Ga0373954_0022137 Ga0373954_0022137_1129_2334 398
85 3300036401 Ga0373937_0015300 Ga0373937_0015300_1384_2589 398
86 3300037068 Ga0373925_0000043 Ga0373925_0000043_71157_72362 398
87 3300045836 Ga0466958_0120493 Ga0466958_0120493_58_1263 398
88 3300045976 Ga0466967_0231105 Ga0466967_0231105_20_1246 398
89 3300046454 Ga0495592_0039278 Ga0495592_0039278_1210_2415 398
90 3300046463 Ga0495653_0031941 Ga0495653_0031941_1035_2240 398
91 3300046477 Ga0495664_0050310 Ga0495664_0050310_128_1333 398
92 3300046511 Ga0495608_0026215 Ga0495608_0026215_1086_2291 398
93 3300046516 Ga0495628_0082734 Ga0495628_0082734_223_1428 398
94 3300046533 Ga0495640_0138317 Ga0495640_0138317_320_1525 398
95 3300046536 Ga0495587_0022467 Ga0495587_0022467_2234_3439 398
96 3300046543 Ga0495645_0034150 Ga0495645_0034150_1382_2587 398
97 3300046559 Ga0495667_0033210 Ga0495667_0033210_1642_2847 398
98 3300046642 Ga0495634_0023975 Ga0495634_0023975_1853_3058 398
99 3300046663 Ga0495635_0013125 Ga0495635_0013125_2376_3581 398
100 3300046674 Ga0495588_0002175 Ga0495588_0002175_721_1971 398
101 3300046678 Ga0495599_0026503 Ga0495599_0026503_1798_3003 398
102 3300046679 Ga0495623_0049119 Ga0495623_0049119_400_1605 398
103 3300046680 Ga0495646_0037931 Ga0495646_0037931_828_2033 398
104 3300046809 Ga0495600_0024993 Ga0495600_0024993_1951_3156 398
105 3300047322 Ga0495680_0056181 Ga0495680_0056181_171_1376 398
106 3300047471 Ga0495684_0056422 Ga0495684_0056422_1355_2560 398
107 3300048088 Ga0495602_0045770 Ga0495602_0045770_1574_2779 398
108 3300048918 Ga0496115_0005608 Ga0496115_0005608_7448_8653 398
109 3300048929 Ga0496126_0024494 Ga0496126_0024494_4554_5759 398
110 3300053077 Ga0495601_0036807 Ga0495601_0036807_1223_2428 398
111 3300053098 Ga0500650_0028797 Ga0500650_0028797_357_1667 398
112 3300053140 Ga0500573_0045356 Ga0500573_0045356_867_2084 398
113 3300053142 Ga0500577_0025519 Ga0500577_0025519_202_1419 398
114 iso_pu_bacteria 2537561592 2537898906 398
115 iso_pu_bacteria 2775506735 2775657697 398
116 iso_pu_bacteria 2808606366 2808876525 398
117 iso_pu_bacteria 2808606370 2808894039 398
118 iso_pu_bacteria 2808606371 2808898027 398
119 iso_pu_bacteria 2811994871 2812318512 398
120 iso_pu_bacteria 2816332305 2817508123 398
121 iso_pu_bacteria 2919042368 2919043737 398
122 iso_pu_bacteria 2919391150 2919391852 398
123 iso_pu_bacteria 2939598168 2939600794 398
124 iso_pu_bacteria 2945916053 2945916274 398
125 iso_pu_bacteria 2945920336 2945923591 398
126 iso_pu_bacteria 2945941187 2945944730 398
127 iso_pu_bacteria 2945956166 2945957054 398
128 iso_pu_bacteria 2946059875 2946060067 398
129 iso_pu_bacteria 2974302888 2974304217 398
130 iso_pu_bacteria 2984551494 2984553958 398
131 iso_pu_bacteria 8004021418 8004022635 398
132 3300000549 LJQas_1002750 LJQas_10027503 399
133 3300044765 Ga0466970_0079782 Ga0466970_0079782_71_1306 399
134 iso_pu_bacteria 2554235227 2555230686 399
135 iso_pu_bacteria 2897561785 2897563075 399
136 iso_pu_bacteria 2920879853 2920881391 399
137 3300005288 Ga0065714_10067176 Ga0065714_100671762 400
138 3300031548 Ga0307408_100125017 Ga0307408_1001250171 400
139 3300031731 Ga0307405_10013900 Ga0307405_100139003 400
140 3300031731 Ga0307405_10099894 Ga0307405_100998942 400
141 3300031852 Ga0307410_10042255 Ga0307410_100422551 400
142 3300031911 Ga0307412_10008808 Ga0307412_100088083 400
143 3300031911 Ga0307412_10125232 Ga0307412_101252321 400
144 3300031995 Ga0307409_100045255 Ga0307409_1000452552 400
145 3300031995 Ga0307409_100336556 Ga0307409_1003365561 400
146 3300032002 Ga0307416_100228532 Ga0307416_1002285321 400
147 3300032002 Ga0307416_100320586 Ga0307416_1003205861 400
148 3300032002 Ga0307416_100330719 Ga0307416_1003307191 400
149 3300053153 Ga0500616_0017940 Ga0500616_0017940_1780_3000 400
150 3300005327 Ga0070658_10000396 Ga0070658_1000039617 401
151 3300013104 Ga0157370_10005838 Ga0157370_100058384 401
152 3300025909 Ga0207705_10000006 Ga0207705_10000006613 401
153 3300037312 Ga0395899_0007505 Ga0395899_0007505_1885_3096 401
154 3300037466 Ga0395898_0006173 Ga0395898_0006173_6703_7914 401
155 3300048925 Ga0496122_0001571 Ga0496122_0001571_29537_30781 401
156 3300048926 Ga0496123_0000119 Ga0496123_0000119_29512_30756 401
157 3300048927 Ga0496124_0001707 Ga0496124_0001707_3294_4538 401
158 3300048928 Ga0496125_0035854 Ga0496125_0035854_2867_4111 401
159 3300053136 Ga0500559_0000800 Ga0500559_0000800_9788_11014 401
160 3300053136 Ga0500559_0022093 Ga0500559_0022093_427_1653 401
161 3300003762 Ga0055542_1003128 Ga0055542_10031285 402
162 3300005288 Ga0065714_10131302 Ga0065714_101313021 402
163 3300005328 Ga0070676_10043752 Ga0070676_100437523 402
164 3300005364 Ga0070673_100016189 Ga0070673_1000161894 402
165 3300005367 Ga0070667_100124366 Ga0070667_1001243662 402
166 3300005456 Ga0070678_100007384 Ga0070678_1000073841 402
167 3300009036 Ga0105244_10044671 Ga0105244_100446713 402
168 3300009098 Ga0105245_10187071 Ga0105245_101870712 402
169 3300011119 Ga0105246_10012899 Ga0105246_100128991 402
170 3300011119 Ga0105246_10016859 Ga0105246_100168592 402
171 3300013102 Ga0157371_10056979 Ga0157371_100569791 402
172 3300013105 Ga0157369_10114134 Ga0157369_101141341 402
173 3300013306 Ga0163162_10198728 Ga0163162_101987282 402
174 3300025254 Ga0209148_1008284 Ga0209148_10082841 402
175 3300025315 Ga0207697_10010013 Ga0207697_100100133 402
176 3300025728 Ga0207655_1036573 Ga0207655_10365732 402
177 3300025735 Ga0207713_1024813 Ga0207713_10248131 402
178 3300025893 Ga0207682_10005167 Ga0207682_100051673 402
179 3300025907 Ga0207645_10000768 Ga0207645_1000076824 402
180 3300025940 Ga0207691_10006097 Ga0207691_100060975 402
181 3300025941 Ga0207711_10067873 Ga0207711_100678732 402
182 3300025972 Ga0207668_10109166 Ga0207668_101091662 402
183 3300025986 Ga0207658_10021186 Ga0207658_100211862 402
184 3300026121 Ga0207683_10114990 Ga0207683_101149901 402
185 3300028379 Ga0268266_10232135 Ga0268266_102321351 402
186 3300031731 Ga0307405_10070736 Ga0307405_100707362 402
187 3300032005 Ga0307411_10054772 Ga0307411_100547721 402
188 3300032005 Ga0307411_10103393 Ga0307411_101033931 402
189 3300032005 Ga0307411_10156889 Ga0307411_101568892 402
190 3300037312 Ga0395899_0031524 Ga0395899_0031524_1990_3198 402
191 3300037418 Ga0395900_0092570 Ga0395900_0092570_1826_3034 402
192 3300037466 Ga0395898_0111705 Ga0395898_0111705_916_2172 402
193 3300037466 Ga0395898_0321346 Ga0395898_0321346_252_1460 402
194 3300042002 Ga0439442_001144 Ga0439442_001144_923_2131 402
195 3300042002 Ga0439442_019741 Ga0439442_019741_86_1312 402
196 3300042146 Ga0450907_001756 Ga0450907_001756_371_1597 402
197 3300042435 Ga0439434_0025607 Ga0439434_0025607_494_1720 402
198 3300046459 Ga0495629_0044926 Ga0495629_0044926_1810_3048 402
199 3300046463 Ga0495653_0026877 Ga0495653_0026877_1281_2519 402
200 3300046473 Ga0495582_0022761 Ga0495582_0022761_960_2198 402
201 3300046475 Ga0495639_0001001 Ga0495639_0001001_5321_6559 402
202 3300046476 Ga0495662_0025914 Ga0495662_0025914_861_2099 402
203 3300046477 Ga0495664_0000638 Ga0495664_0000638_9674_10912 402
204 3300046499 Ga0495594_0043561 Ga0495594_0043561_722_1960 402
205 3300046518 Ga0495631_0006860 Ga0495631_0006860_3285_4493 402
206 3300046528 Ga0495642_0010456 Ga0495642_0010456_1710_2939 402
207 3300046528 Ga0495642_0073359 Ga0495642_0073359_50_1258 402
208 3300046531 Ga0495665_0000808 Ga0495665_0000808_919_2157 402
209 3300046531 Ga0495665_0018324 Ga0495665_0018324_2409_3647 402
210 3300046535 Ga0495586_0002235 Ga0495586_0002235_1214_2452 402
211 3300046535 Ga0495586_0005802 Ga0495586_0005802_998_2236 402
212 3300046536 Ga0495587_0002713 Ga0495587_0002713_10056_11294 402
213 3300046543 Ga0495645_0000495 Ga0495645_0000495_947_2185 402
214 3300046558 Ga0495633_0029079 Ga0495633_0029079_587_1795 402
215 3300046559 Ga0495667_0000098 Ga0495667_0000098_42122_43360 402
216 3300046615 Ga0495656_0007722 Ga0495656_0007722_754_1962 402
217 3300046674 Ga0495588_0013587 Ga0495588_0013587_2144_3367 402
218 3300046674 Ga0495588_0014156 Ga0495588_0014156_2115_3353 402
219 3300046674 Ga0495588_0034302 Ga0495588_0034302_511_1734 402
220 3300046691 Ga0495670_0002008 Ga0495670_0002008_5511_6719 402
221 3300047315 Ga0495581_0024684 Ga0495581_0024684_1281_2519 402
222 3300047317 Ga0495604_0102480 Ga0495604_0102480_810_2048 402
223 3300047318 Ga0495636_0008637 Ga0495636_0008637_1680_2888 402
224 3300047444 Ga0495675_0011481 Ga0495675_0011481_1569_2807 402
225 3300047470 Ga0495681_0049300 Ga0495681_0049300_603_1811 402
226 3300048903 Ga0496100_0023085 Ga0496100_0023085_773_1981 402
227 3300048904 Ga0496101_0026223 Ga0496101_0026223_784_1992 402
228 3300048905 Ga0496102_0013111 Ga0496102_0013111_2660_3868 402
229 3300048905 Ga0496102_0125629 Ga0496102_0125629_307_1515 402
230 3300048905 Ga0496102_0137637 Ga0496102_0137637_337_1548 402
231 3300048906 Ga0496103_0038679 Ga0496103_0038679_936_2144 402
232 3300048906 Ga0496103_0039670 Ga0496103_0039670_1265_2473 402
233 3300048906 Ga0496103_0066353 Ga0496103_0066353_897_2108 402
234 3300048909 Ga0496106_0020718 Ga0496106_0020718_861_2069 402
235 3300048909 Ga0496106_0034447 Ga0496106_0034447_876_2087 402
236 3300048909 Ga0496106_0150342 Ga0496106_0150342_256_1464 402
237 3300048910 Ga0496107_0059975 Ga0496107_0059975_794_2002 402
238 3300048910 Ga0496107_0257061 Ga0496107_0257061_42_1253 402
239 3300048911 Ga0496108_0203397 Ga0496108_0203397_374_1582 402
240 3300048911 Ga0496108_0215199 Ga0496108_0215199_373_1581 402
241 3300048913 Ga0496110_0062357 Ga0496110_0062357_784_1992 402
242 3300048913 Ga0496110_0105890 Ga0496110_0105890_388_1596 402
243 3300048914 Ga0496111_0075158 Ga0496111_0075158_944_2152 402
244 3300048915 Ga0496112_0094485 Ga0496112_0094485_1527_2735 402
245 3300048917 Ga0496114_0044107 Ga0496114_0044107_1654_2862 402
246 3300048925 Ga0496122_0109189 Ga0496122_0109189_528_1754 402
247 3300048927 Ga0496124_0017205 Ga0496124_0017205_4498_5724 402
248 3300013104 Ga0157370_10031373 Ga0157370_100313737 403
249 3300032002 Ga0307416_100339453 Ga0307416_1003394531 403
250 3300048912 Ga0496109_0017945 Ga0496109_0017945_936_2213 404
251 3300000549 LJQas_1002592 LJQas_10025923 405

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01717

Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

205

428

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bq5-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ and homocysteine (monoclinic) 0.8617 7 403
1t7l-assembly2.cif.gz_B crystal structure of cobalamin-independent methionine synthase from t. maritima 0.8456 7 401
3bq6-assembly2.cif.gz_B crystal structure of t. maritima cobalamin-independent methionine synthase complexed with zn2+ (monoclinic) 0.8436 7 401
1t7l-assembly1.cif.gz_A crystal structure of cobalamin-independent methionine synthase from t. maritima 0.8417 7 404
3l7r-assembly1.cif.gz_A crystal structure of mete from streptococcus mutans 0.8416 11 402
ID Description Score Start End Superfamily
af_K7MME4_84_171_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.86 317 398 3.20.20.210
2nq5A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8255 10 401 3.20.20.210
af_Q54X49_428_818_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8243 9 404 3.20.20.210
1xdjA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.823 7 404 3.20.20.210
4l61A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8078 7 403 3.20.20.210
ID Description Score Start End GO Terms
AF-A0A537W1R3-F1-model_v4 Epoxyalkane--coenzyme M transferase 0.9977 304 402 GO:0003871
GO:0008270
GO:0009086
AF-C3PHD0-F1-model_v4 Cobalamin-independent methionine synthase MetE C-terminal/archaeal domain-containing protein 0.9878 323 404
AF-A0A0K8Q7S1-F1-model_v4 Probable methylcobalamin:homocysteine methyltransferase 0.9869 102 393 GO:0003871
GO:0008270
GO:0009086
GO:0032259
AF-A0A0X2NN37-F1-model_v4 Cobalamin-independent synthase, Catalytic domain 0.983 180 404
AF-W1VQR1-F1-model_v4 Methionine synthase vitamin-B12 independent 0.9817 161 402 GO:0003871
GO:0008270
GO:0009086

Feature Viewer

pLDDT pTM Quality
91.12 0.91 High
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Predicted Structure (AlphaFold2)

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