F362883

General Info

Members Datasets Scaffolds Average Seq Length
252 159 252 283

Family's Representative Sequence

Representative Sequence 3300002459|JGI24751J29686_10011159|JGI24751J29686_100111592
Length 306
Sequence MTMAQEMAQGSGLTAQEPAQERPIPAAPGFFASGLRVFDLSLSEMLWSRRTIFMILVVGAPVLIALFLRVLVALGAPILEGHRSTQGGGTETIRMAGPAIFGLMIWVFYLRFTVPVLGVFYGTALMADEVEDKTITYLFTRPVRRGAVLFGKYLAYLACTIFVVLPSVMLVYLLVVPLRGSLGGSFLDLVKDLALLALGLAVYGALFAFIGAKFKRPLLIGLIFIFGWEQGALAFPGYLKRFTIAYYIQGLVPHAMPSDSTISMIQGIFRESPSLFTSLVCLAVILAGFVSLAAWVVERREYVLEQ

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
113 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
114 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
117 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
118 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
119 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
124 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.59
Nodule 0
Rhizoplane 3.57
Rhizosphere 94.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10011159 3300002459 Bacteria 1853
2 Ga0065704_10183906 3300005289 Unclassified 1223
3 Ga0065712_10070711 3300005290 Bacteria 5770
4 Ga0065712_10121227 3300005290 Bacteria 1660
5 Ga0065715_10008224 3300005293 Bacteria 2803
6 Ga0065715_10040798 3300005293 Bacteria 1012
7 Ga0065715_10093154 3300005293 Bacteria 4790
8 Ga0065715_10097397 3300005293 Bacteria 3712
9 Ga0065715_10201243 3300005293 Unclassified 1360
10 Ga0065715_10208789 3300005293 Bacteria 1324
11 Ga0065715_10233910 3300005293 Unclassified 1224
12 Ga0065707_10149304 3300005295 Bacteria 1676
13 Ga0070683_100007104 3300005329 Bacteria 9436
14 Ga0070690_100034249 3300005330 Bacteria 3182
15 Ga0070670_100006089 3300005331 Bacteria 10198
16 Ga0070670_100021238 3300005331 Bacteria 5586
17 Ga0070670_100027041 3300005331 Bacteria 4935
18 Ga0068869_100132492 3300005334 Bacteria 1917
19 Ga0070666_10059258 3300005335 Bacteria 2589
20 Ga0068868_100431394 3300005338 Unclassified 1143
21 Ga0070689_100018394 3300005340 Bacteria 5146
22 Ga0070689_100412743 3300005340 Unclassified 1143
23 Ga0070687_100033847 3300005343 Unclassified 2525
24 Ga0070661_100075651 3300005344 Bacteria 2481
25 Ga0070661_100194992 3300005344 Bacteria 1546
26 Ga0070669_100000449 3300005353 Bacteria 31407
27 Ga0070669_100449272 3300005353 Bacteria 1062
28 Ga0070675_100022379 3300005354 Bacteria 5051
29 Ga0070675_100115019 3300005354 Bacteria 2280
30 Ga0070675_100143399 3300005354 Bacteria 2043
31 Ga0070675_100180341 3300005354 Bacteria 1825
32 Ga0070671_100146821 3300005355 Bacteria 1991
33 Ga0070671_100426270 3300005355 Bacteria 1136
34 Ga0070673_100015302 3300005364 Bacteria 5383
35 Ga0070673_100055535 3300005364 Bacteria 3120
36 Ga0070673_100072153 3300005364 Bacteria 2776
37 Ga0070659_100129124 3300005366 Bacteria 2051
38 Ga0070713_100006723 3300005436 Bacteria 8005
39 Ga0070705_100052418 3300005440 Unclassified 2384
40 Ga0070700_100049832 3300005441 Bacteria 2601
41 Ga0070708_100565753 3300005445 Bacteria 1072
42 Ga0070663_100016028 3300005455 Bacteria 4854
43 Ga0070678_100017255 3300005456 Bacteria 4643
44 Ga0070678_100139450 3300005456 Unclassified 1938
45 Ga0070678_100525049 3300005456 Bacteria 1048
46 Ga0070662_100110945 3300005457 Bacteria 2089
47 Ga0070662_100145419 3300005457 Bacteria 1841
48 Ga0068867_100004667 3300005459 Bacteria 9639
49 Ga0070685_10150385 3300005466 Bacteria 1475
50 Ga0070685_10154714 3300005466 Bacteria 1456
51 Ga0070679_100210116 3300005530 Unclassified 1910
52 Ga0070684_100002256 3300005535 Bacteria 14176
53 Ga0070672_100051969 3300005543 Bacteria 3198
54 Ga0070672_100203269 3300005543 Bacteria 1657
55 Ga0070672_100571572 3300005543 Bacteria 983
56 Ga0070686_100079841 3300005544 Unclassified 2163
57 Ga0070686_100145889 3300005544 Unclassified 1652
58 Ga0070693_100027320 3300005547 Unclassified 3092
59 Ga0070693_100435290 3300005547 Bacteria 917
60 Ga0070704_100039160 3300005549 Unclassified 3253
61 Ga0070664_100000081 3300005564 Bacteria 60323
62 Ga0070664_100003467 3300005564 Bacteria 12739
63 Ga0068859_100042914 3300005617 Bacteria 4544
64 Ga0068859_100236392 3300005617 Unclassified 1916
65 Ga0068864_100131340 3300005618 Bacteria 2250
66 Ga0068864_100285027 3300005618 Bacteria 1543
67 Ga0068866_10035931 3300005718 Bacteria 2423
68 Ga0068866_10179912 3300005718 Unclassified 1248
69 Ga0068851_10005417 3300005834 Bacteria 5789
70 Ga0068860_100034847 3300005843 Bacteria 4829
71 Ga0068860_100355671 3300005843 Bacteria 1442
72 Ga0068862_100023803 3300005844 Bacteria 5134
73 Ga0081455_10308644 3300005937 Bacteria 1132
74 Ga0070717_10088847 3300006028 Bacteria 2605
75 Ga0075365_10167582 3300006038 Bacteria 1533
76 Ga0075364_10129969 3300006051 Unclassified 1690
77 Ga0068871_100624387 3300006358 Bacteria 982
78 Ga0075428_100011822 3300006844 Bacteria 9715
79 Ga0075428_100416898 3300006844 Bacteria 1439
80 Ga0075430_100006908 3300006846 Bacteria 9567
81 Ga0075431_100008025 3300006847 Bacteria 10532
82 Ga0075433_10046337 3300006852 Unclassified 3781
83 Ga0075434_100011753 3300006871 Bacteria 8269
84 Ga0075434_100095570 3300006871 Bacteria 2977
85 Ga0075434_100411661 3300006871 Unclassified 1373
86 Ga0075429_100181542 3300006880 Unclassified 1844
87 Ga0075429_100182614 3300006880 Bacteria 1838
88 Ga0075429_100351903 3300006880 Bacteria 1289
89 Ga0097620_100042913 3300006931 Bacteria 4544
90 Ga0097620_100236409 3300006931 Unclassified 1916
91 Ga0075435_100108959 3300007076 Bacteria 2302
92 Ga0105240_10166552 3300009093 Bacteria 2613
93 Ga0111539_10006238 3300009094 Bacteria 15388
94 Ga0111539_10224356 3300009094 Bacteria 2189
95 Ga0114129_10009622 3300009147 Bacteria 13788
96 Ga0114129_10025441 3300009147 Bacteria 8388
97 Ga0114129_10026206 3300009147 Bacteria 8255
98 Ga0114129_10048292 3300009147 Bacteria 5981
99 Ga0105243_10006849 3300009148 Bacteria 8787
100 Ga0105241_10082576 3300009174 Bacteria 2519
101 Ga0105248_10066317 3300009177 Bacteria 4053
102 Ga0105248_10072319 3300009177 Bacteria 3875
103 Ga0105248_10639332 3300009177 Bacteria 1200
104 Ga0105248_10761931 3300009177 Bacteria 1092
105 Ga0105238_10026535 3300009551 Bacteria 5906
106 Ga0105249_10011641 3300009553 Bacteria 7735
107 Ga0105249_10059007 3300009553 Bacteria 3518
108 Ga0163162_10172552 3300013306 Bacteria 2287
109 Ga0157375_10035350 3300013308 Bacteria 4768
110 Ga0157375_10280969 3300013308 Bacteria 1828
111 Ga0163163_10101591 3300014325 Bacteria 2898
112 Ga0157380_10026565 3300014326 Bacteria 4396
113 Ga0157380_10037247 3300014326 Bacteria 3768
114 Ga0157380_10221048 3300014326 Bacteria 1695
115 Ga0157380_10232549 3300014326 Unclassified 1656
116 Ga0157376_10211049 3300014969 Bacteria 1792
117 Ga0207697_10029929 3300025315 Bacteria 2229
118 Ga0207656_10002085 3300025321 Bacteria 6684
119 Ga0207647_10036003 3300025904 Bacteria 3148
120 Ga0207695_10499656 3300025913 Bacteria 1098
121 Ga0207662_10006976 3300025918 Bacteria 6130
122 Ga0207649_10047974 3300025920 Bacteria 2632
123 Ga0207681_10006665 3300025923 Bacteria 7092
124 Ga0207681_10056655 3300025923 Bacteria 2674
125 Ga0207694_10048570 3300025924 Bacteria 3283
126 Ga0207650_10014123 3300025925 Bacteria 5547
127 Ga0207650_10015833 3300025925 Bacteria 5259
128 Ga0207650_10026755 3300025925 Bacteria 4120
129 Ga0207650_10045352 3300025925 Bacteria 3234
130 Ga0207659_10006393 3300025926 Bacteria 7216
131 Ga0207659_10059335 3300025926 Bacteria 2750
132 Ga0207700_10174347 3300025928 Bacteria 1796
133 Ga0207644_10043691 3300025931 Bacteria 3181
134 Ga0207690_10103422 3300025932 Bacteria 2038
135 Ga0207690_10127101 3300025932 Bacteria 1860
136 Ga0207690_10287623 3300025932 Unclassified 1282
137 Ga0207706_10058561 3300025933 Bacteria 3393
138 Ga0207706_10196977 3300025933 Bacteria 1767
139 Ga0207706_10309743 3300025933 Bacteria 1375
140 Ga0207686_10025389 3300025934 Bacteria 3446
141 Ga0207691_10117659 3300025940 Bacteria 2358
142 Ga0207691_10188418 3300025940 Bacteria 1800
143 Ga0207711_10038773 3300025941 Bacteria 4052
144 Ga0207689_10053202 3300025942 Unclassified 3336
145 Ga0207661_10007652 3300025944 Bacteria 7685
146 Ga0207679_10003627 3300025945 Bacteria 9570
147 Ga0207679_10005518 3300025945 Bacteria 7926
148 Ga0207651_10032032 3300025960 Bacteria 3370
149 Ga0207651_10043082 3300025960 Bacteria 3009
150 Ga0207712_10011601 3300025961 Bacteria 5619
151 Ga0207668_10192090 3300025972 Bacteria 1619
152 Ga0207640_10024107 3300025981 Bacteria 3666
153 Ga0207703_10065727 3300026035 Bacteria 2981
154 Ga0207678_10020397 3300026067 Bacteria 5812
155 Ga0207708_10005533 3300026075 Bacteria 9320
156 Ga0207641_10422505 3300026088 Bacteria 1284
157 Ga0207648_10001413 3300026089 Bacteria 26456
158 Ga0207676_10109488 3300026095 Bacteria 2308
159 Ga0207676_10258802 3300026095 Bacteria 1570
160 Ga0207674_10009058 3300026116 Bacteria 11430
161 Ga0207675_100031786 3300026118 Bacteria 4917
162 Ga0207683_10015810 3300026121 Bacteria 6424
163 Ga0207683_10084003 3300026121 Bacteria 2830
164 Ga0207683_10406320 3300026121 Bacteria 1253
165 Ga0209974_10051871 3300027876 Bacteria 1380
166 Ga0268265_10028823 3300028380 Bacteria 3979
167 Ga0268265_10333037 3300028380 Bacteria 1379
168 Ga0268265_10448851 3300028380 Bacteria 1204
169 Ga0268264_10051149 3300028381 Bacteria 3442
170 Ga0307408_100010010 3300031548 Bacteria 6248
171 Ga0307408_100063738 3300031548 Bacteria 2697
172 Ga0307413_10098411 3300031824 Bacteria 1926
173 Ga0307407_10031781 3300031903 Bacteria 2863
174 Ga0307412_10043670 3300031911 Bacteria 2920
175 Ga0307409_100020576 3300031995 Bacteria 4501
176 Ga0307409_100334593 3300031995 Bacteria 1422
177 Ga0307416_100089497 3300032002 Bacteria 2636
178 Ga0307416_100103838 3300032002 Bacteria 2482
179 Ga0307416_100205783 3300032002 Bacteria 1872
180 Ga0307416_100254566 3300032002 Bacteria 1711
181 Ga0307414_10132891 3300032004 Bacteria 1935
182 Ga0307411_10047421 3300032005 Bacteria 2777
183 Ga0307411_10190001 3300032005 Bacteria 1567
184 Ga0307411_10362366 3300032005 Bacteria 1186
185 Ga0307415_100045038 3300032126 Bacteria 2955
186 Ga0373939_0010451 3300035114 Bacteria 2322
187 Ga0373961_0070093 3300035241 Bacteria 1083
188 Ga0373925_0003025 3300037068 Bacteria 13231
189 Ga0439453_0017138 3300041408 Bacteria 1270
190 Ga0439433_0020536 3300041999 Bacteria 1475
191 Ga0439446_0011125 3300042156 Bacteria 2438
192 Ga0439460_0025551 3300042461 Bacteria 1645
193 Ga0451577_0020373 3300042876 Bacteria 6087
194 Ga0495586_0065476 3300046535 Bacteria 1981
195 Ga0495645_0066158 3300046543 Bacteria 2613
196 Ga0495588_0116489 3300046674 Bacteria 1408
197 Ga0495599_0152172 3300046678 Bacteria 1432
198 Ga0495684_0243773 3300047471 Unclassified 1310
199 Ga0496104_0017213 3300048907 Bacteria 6576
200 Ga0496106_0190465 3300048909 Bacteria 1631
201 Ga0496108_0013540 3300048911 Bacteria 6657
202 Ga0496109_0025891 3300048912 Bacteria 5229
203 Ga0496110_0000315 3300048913 Bacteria 31988
204 Ga0496111_0001017 3300048914 Bacteria 15405
205 Ga0496112_0016499 3300048915 Bacteria 6921
206 Ga0496112_0279404 3300048915 Bacteria 1617
207 Ga0496112_0619168 3300048915 Bacteria 1014
208 Ga0501034_0001604 3300049571 Bacteria 29391
209 Ga0501039_0072173 3300049575 Bacteria 2683
210 Ga0501041_0027611 3300049577 Bacteria 3420
211 Ga0501042_0063477 3300049578 Bacteria 2640
212 Ga0501048_0039766 3300049582 Bacteria 3372
213 Ga0501071_0005419 3300049587 Bacteria 8198
214 Ga0501071_0139464 3300049587 Unclassified 1805
215 Ga0501072_0039569 3300049588 Bacteria 3702
216 Ga0501072_0050173 3300049588 Bacteria 3286
217 Ga0501075_0032044 3300049591 Bacteria 3904
218 Ga0501075_0096306 3300049591 Bacteria 2246
219 Ga0501076_0011163 3300049592 Bacteria 6684
220 Ga0501076_0398387 3300049592 Unclassified 1132
221 Ga0501079_0180356 3300049741 Bacteria 1648
222 Ga0501081_0124729 3300049743 Bacteria 1836
223 Ga0501081_0254156 3300049743 Bacteria 1283
224 Ga0501045_0093372 3300049824 Unclassified 2226
225 Ga0501045_0416659 3300049824 Unclassified 999
226 nmdc:mga0yw44_51492_c1 3300050492 Bacteria 2493
227 nmdc:mga05p37_111405_c1 3300050507 Bacteria 3366
228 nmdc:mga05p37_13287_c1 3300050507 Bacteria 9859
229 nmdc:mga05p37_32478_c1 3300050507 Bacteria 6383
230 nmdc:mga05p37_56181_c1 3300050507 Bacteria 4846
231 nmdc:mga09592_119543_c1 3300050508 Bacteria 2262
232 nmdc:mga09592_128199_c1 3300050508 Unclassified 2182
233 nmdc:mga09592_151213_c1 3300050508 Bacteria 2003
234 nmdc:mga0qj67_96237_c1 3300050509 Bacteria 2384
235 nmdc:mga06r32_73400_c1 3300050510 Bacteria 3315
236 nmdc:mga06r32_75688_c1 3300050510 Unclassified 3267
237 nmdc:mga08y16_282727_c1 3300050511 Bacteria 1711
238 nmdc:mga08y16_499666_c1 3300050511 Unclassified 1236
239 nmdc:mga08y16_85629_c1 3300050511 Bacteria 3285
240 nmdc:mga0n895_10735_c1 3300050512 Bacteria 8119
241 nmdc:mga0n895_241474_c1 3300050512 Bacteria 1833
242 nmdc:mga0n895_317351_c1 3300050512 Unclassified 1579
243 nmdc:mga0n895_92872_c1 3300050512 Bacteria 3021
244 nmdc:mga0a205_7556_c1 3300050515 Bacteria 5101
245 Ga0500628_015890 3300053129 Bacteria 1446
246 Ga0501084_0021034 3300054114 Bacteria 5442
247 Ga0590071_000206 3300059421 Bacteria 17414
248 Ga0590074_015143 3300059423 Unclassified 1307
249 Ga0590075_000228 3300059424 Bacteria 15773
250 Ga0590075_033848 3300059424 Unclassified 1298
251 Ga0590077_000235 3300059426 Bacteria 15785
252 Ga0530510_0116211 3300061734 Bacteria 1961

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049578 Ga0501042_0063477 Ga0501042_0063477_1882_2628 248
2 3300048915 Ga0496112_0279404 Ga0496112_0279404_820_1569 249
3 3300049824 Ga0501045_0093372 Ga0501045_0093372_30_785 251
4 3300048909 Ga0496106_0190465 Ga0496106_0190465_861_1619 252
5 3300049592 Ga0501076_0398387 Ga0501076_0398387_22_780 252
6 3300050510 nmdc:mga06r32_75688_c1 nmdc:mga06r32_75688_c1_2496_3257 253
7 3300005466 Ga0070685_10150385 Ga0070685_101503851 258
8 3300009551 Ga0105238_10026535 Ga0105238_100265352 260
9 3300009177 Ga0105248_10066317 Ga0105248_100663173 262
10 3300042156 Ga0439446_0011125 Ga0439446_0011125_1423_2217 264
11 3300013308 Ga0157375_10035350 Ga0157375_100353502 266
12 3300005544 Ga0070686_100079841 Ga0070686_1000798412 272
13 3300049571 Ga0501034_0001604 Ga0501034_0001604_2533_3351 272
14 3300050508 nmdc:mga09592_119543_c1 nmdc:mga09592_119543_c1_751_1572 273
15 3300037068 Ga0373925_0003025 Ga0373925_0003025_10334_11158 274
16 3300005293 Ga0065715_10008224 Ga0065715_100082242 275
17 3300005354 Ga0070675_100115019 Ga0070675_1001150193 275
18 3300005436 Ga0070713_100006723 Ga0070713_1000067233 275
19 3300006028 Ga0070717_10088847 Ga0070717_100888472 275
20 3300006880 Ga0075429_100182614 Ga0075429_1001826142 275
21 3300014326 Ga0157380_10037247 Ga0157380_100372473 275
22 3300025928 Ga0207700_10174347 Ga0207700_101743472 275
23 3300025972 Ga0207668_10192090 Ga0207668_101920902 275
24 3300005340 Ga0070689_100412743 Ga0070689_1004127432 276
25 3300005355 Ga0070671_100146821 Ga0070671_1001468212 276
26 3300005364 Ga0070673_100015302 Ga0070673_1000153025 276
27 3300005456 Ga0070678_100525049 Ga0070678_1005250491 276
28 3300005564 Ga0070664_100003467 Ga0070664_1000034676 276
29 3300005617 Ga0068859_100042914 Ga0068859_1000429145 276
30 3300005618 Ga0068864_100131340 Ga0068864_1001313402 276
31 3300005718 Ga0068866_10179912 Ga0068866_101799122 276
32 3300005843 Ga0068860_100355671 Ga0068860_1003556712 276
33 3300006358 Ga0068871_100624387 Ga0068871_1006243871 276
34 3300006931 Ga0097620_100042913 Ga0097620_1000429132 276
35 3300013306 Ga0163162_10172552 Ga0163162_101725522 276
36 3300014326 Ga0157380_10026565 Ga0157380_100265653 276
37 3300025931 Ga0207644_10043691 Ga0207644_100436913 276
38 3300025945 Ga0207679_10005518 Ga0207679_100055186 276
39 3300025960 Ga0207651_10043082 Ga0207651_100430823 276
40 3300026035 Ga0207703_10065727 Ga0207703_100657272 276
41 3300026095 Ga0207676_10109488 Ga0207676_101094882 276
42 3300026121 Ga0207683_10084003 Ga0207683_100840033 276
43 3300026121 Ga0207683_10406320 Ga0207683_104063201 276
44 3300028381 Ga0268264_10051149 Ga0268264_100511494 276
45 3300031548 Ga0307408_100063738 Ga0307408_1000637383 276
46 3300031903 Ga0307407_10031781 Ga0307407_100317811 276
47 3300031911 Ga0307412_10043670 Ga0307412_100436703 276
48 3300032002 Ga0307416_100254566 Ga0307416_1002545662 276
49 3300032004 Ga0307414_10132891 Ga0307414_101328911 276
50 3300032005 Ga0307411_10047421 Ga0307411_100474213 276
51 3300046543 Ga0495645_0066158 Ga0495645_0066158_1118_1951 276
52 3300046674 Ga0495588_0116489 Ga0495588_0116489_167_997 276
53 3300046678 Ga0495599_0152172 Ga0495599_0152172_232_1065 276
54 3300047471 Ga0495684_0243773 Ga0495684_0243773_273_1106 276
55 3300005456 Ga0070678_100139450 Ga0070678_1001394502 277
56 3300006051 Ga0075364_10129969 Ga0075364_101299692 277
57 3300009093 Ga0105240_10166552 Ga0105240_101665522 277
58 3300009147 Ga0114129_10009622 Ga0114129_100096227 277
59 3300025913 Ga0207695_10499656 Ga0207695_104996562 277
60 3300050507 nmdc:mga05p37_13287_c1 nmdc:mga05p37_13287_c1_8532_9365 277
61 3300005330 Ga0070690_100034249 Ga0070690_1000342492 278
62 3300005334 Ga0068869_100132492 Ga0068869_1001324922 278
63 3300005335 Ga0070666_10059258 Ga0070666_100592583 278
64 3300005340 Ga0070689_100018394 Ga0070689_1000183944 278
65 3300005343 Ga0070687_100033847 Ga0070687_1000338473 278
66 3300005344 Ga0070661_100194992 Ga0070661_1001949921 278
67 3300005355 Ga0070671_100426270 Ga0070671_1004262702 278
68 3300005364 Ga0070673_100055535 Ga0070673_1000555354 278
69 3300005366 Ga0070659_100129124 Ga0070659_1001291242 278
70 3300005440 Ga0070705_100052418 Ga0070705_1000524182 278
71 3300005441 Ga0070700_100049832 Ga0070700_1000498322 278
72 3300005445 Ga0070708_100565753 Ga0070708_1005657531 278
73 3300005457 Ga0070662_100110945 Ga0070662_1001109452 278
74 3300005459 Ga0068867_100004667 Ga0068867_1000046674 278
75 3300005544 Ga0070686_100145889 Ga0070686_1001458891 278
76 3300005547 Ga0070693_100027320 Ga0070693_1000273204 278
77 3300005549 Ga0070704_100039160 Ga0070704_1000391604 278
78 3300005617 Ga0068859_100236392 Ga0068859_1002363922 278
79 3300005718 Ga0068866_10035931 Ga0068866_100359312 278
80 3300005843 Ga0068860_100034847 Ga0068860_1000348474 278
81 3300006846 Ga0075430_100006908 Ga0075430_10000690811 278
82 3300006847 Ga0075431_100008025 Ga0075431_1000080256 278
83 3300006880 Ga0075429_100351903 Ga0075429_1003519032 278
84 3300006931 Ga0097620_100236409 Ga0097620_1002364092 278
85 3300009147 Ga0114129_10026206 Ga0114129_100262065 278
86 3300009148 Ga0105243_10006849 Ga0105243_100068498 278
87 3300009174 Ga0105241_10082576 Ga0105241_100825762 278
88 3300009177 Ga0105248_10072319 Ga0105248_100723193 278
89 3300009553 Ga0105249_10059007 Ga0105249_100590074 278
90 3300025904 Ga0207647_10036003 Ga0207647_100360033 278
91 3300025918 Ga0207662_10006976 Ga0207662_100069764 278
92 3300025932 Ga0207690_10103422 Ga0207690_101034222 278
93 3300025933 Ga0207706_10058561 Ga0207706_100585612 278
94 3300025934 Ga0207686_10025389 Ga0207686_100253894 278
95 3300025940 Ga0207691_10117659 Ga0207691_101176592 278
96 3300025941 Ga0207711_10038773 Ga0207711_100387732 278
97 3300025942 Ga0207689_10053202 Ga0207689_100532022 278
98 3300025960 Ga0207651_10032032 Ga0207651_100320322 278
99 3300025981 Ga0207640_10024107 Ga0207640_100241074 278
100 3300026075 Ga0207708_10005533 Ga0207708_100055335 278
101 3300026088 Ga0207641_10422505 Ga0207641_104225051 278
102 3300026089 Ga0207648_10001413 Ga0207648_1000141310 278
103 3300028380 Ga0268265_10448851 Ga0268265_104488511 278
104 3300035114 Ga0373939_0010451 Ga0373939_0010451_99_935 278
105 3300035241 Ga0373961_0070093 Ga0373961_0070093_124_960 278
106 3300048915 Ga0496112_0619168 Ga0496112_0619168_148_984 278
107 3300050507 nmdc:mga05p37_56181_c1 nmdc:mga05p37_56181_c1_3490_4380 278
108 3300050508 nmdc:mga09592_151213_c1 nmdc:mga09592_151213_c1_247_1137 278
109 3300050509 nmdc:mga0qj67_96237_c1 nmdc:mga0qj67_96237_c1_1052_1942 278
110 3300050510 nmdc:mga06r32_73400_c1 nmdc:mga06r32_73400_c1_1834_2724 278
111 3300005331 Ga0070670_100006089 Ga0070670_1000060898 279
112 3300005353 Ga0070669_100449272 Ga0070669_1004492721 279
113 3300005354 Ga0070675_100022379 Ga0070675_1000223794 279
114 3300005466 Ga0070685_10154714 Ga0070685_101547142 279
115 3300005543 Ga0070672_100571572 Ga0070672_1005715721 279
116 3300005834 Ga0068851_10005417 Ga0068851_100054173 279
117 3300013308 Ga0157375_10280969 Ga0157375_102809692 279
118 3300025321 Ga0207656_10002085 Ga0207656_100020857 279
119 3300025924 Ga0207694_10048570 Ga0207694_100485702 279
120 3300025925 Ga0207650_10026755 Ga0207650_100267552 279
121 3300025926 Ga0207659_10006393 Ga0207659_100063937 279
122 3300005289 Ga0065704_10183906 Ga0065704_101839062 280
123 3300014326 Ga0157380_10232549 Ga0157380_102325492 281
124 3300049577 Ga0501041_0027611 Ga0501041_0027611_2320_3168 281
125 3300054114 Ga0501084_0021034 Ga0501084_0021034_791_1639 281
126 3300005293 Ga0065715_10093154 Ga0065715_100931545 282
127 3300005338 Ga0068868_100431394 Ga0068868_1004313941 282
128 3300005354 Ga0070675_100143399 Ga0070675_1001433992 282
129 3300005364 Ga0070673_100072153 Ga0070673_1000721534 282
130 3300005456 Ga0070678_100017255 Ga0070678_1000172554 282
131 3300005543 Ga0070672_100203269 Ga0070672_1002032691 282
132 3300005618 Ga0068864_100285027 Ga0068864_1002850272 282
133 3300009177 Ga0105248_10639332 Ga0105248_106393322 282
134 3300009177 Ga0105248_10761931 Ga0105248_107619311 282
135 3300014325 Ga0163163_10101591 Ga0163163_101015912 282
136 3300014969 Ga0157376_10211049 Ga0157376_102110492 282
137 3300025923 Ga0207681_10056655 Ga0207681_100566553 282
138 3300025926 Ga0207659_10059335 Ga0207659_100593352 282
139 3300025933 Ga0207706_10309743 Ga0207706_103097432 282
140 3300025940 Ga0207691_10188418 Ga0207691_101884182 282
141 3300026095 Ga0207676_10258802 Ga0207676_102588022 282
142 3300026121 Ga0207683_10015810 Ga0207683_100158104 282
143 3300031824 Ga0307413_10098411 Ga0307413_100984112 282
144 3300031995 Ga0307409_100020576 Ga0307409_1000205762 282
145 3300032005 Ga0307411_10190001 Ga0307411_101900011 282
146 3300032126 Ga0307415_100045038 Ga0307415_1000450384 282
147 3300049587 Ga0501071_0139464 Ga0501071_0139464_450_1301 282
148 3300005293 Ga0065715_10040798 Ga0065715_100407982 283
149 3300005293 Ga0065715_10097397 Ga0065715_100973971 283
150 3300005547 Ga0070693_100435290 Ga0070693_1004352901 283
151 3300006038 Ga0075365_10167582 Ga0075365_101675822 283
152 3300009147 Ga0114129_10048292 Ga0114129_100482924 283
153 3300025932 Ga0207690_10127101 Ga0207690_101271012 283
154 3300025932 Ga0207690_10287623 Ga0207690_102876231 283
155 3300032002 Ga0307416_100205783 Ga0307416_1002057831 283
156 3300032005 Ga0307411_10362366 Ga0307411_103623661 283
157 3300050492 nmdc:mga0yw44_51492_c1 nmdc:mga0yw44_51492_c1_195_1046 283
158 3300050507 nmdc:mga05p37_111405_c1 nmdc:mga05p37_111405_c1_1424_2275 283
159 3300005290 Ga0065712_10121227 Ga0065712_101212272 284
160 3300005331 Ga0070670_100027041 Ga0070670_1000270412 284
161 3300025925 Ga0207650_10015833 Ga0207650_100158337 284
162 3300031995 Ga0307409_100334593 Ga0307409_1003345932 284
163 3300032002 Ga0307416_100089497 Ga0307416_1000894972 284
164 3300032002 Ga0307416_100103838 Ga0307416_1001038382 284
165 3300046535 Ga0495586_0065476 Ga0495586_0065476_124_978 284
166 3300050511 nmdc:mga08y16_282727_c1 nmdc:mga08y16_282727_c1_599_1453 284
167 3300053129 Ga0500628_015890 Ga0500628_015890_331_1188 285
168 3300042461 Ga0439460_0025551 Ga0439460_0025551_266_1129 286
169 3300049575 Ga0501039_0072173 Ga0501039_0072173_1690_2550 286
170 3300049582 Ga0501048_0039766 Ga0501048_0039766_127_987 286
171 3300049587 Ga0501071_0005419 Ga0501071_0005419_6131_6991 286
172 3300049588 Ga0501072_0050173 Ga0501072_0050173_1206_2066 286
173 3300049591 Ga0501075_0032044 Ga0501075_0032044_2977_3837 286
174 3300049591 Ga0501075_0096306 Ga0501075_0096306_1145_2005 286
175 3300049592 Ga0501076_0011163 Ga0501076_0011163_1082_1942 286
176 3300049741 Ga0501079_0180356 Ga0501079_0180356_221_1081 286
177 3300049743 Ga0501081_0124729 Ga0501081_0124729_951_1811 286
178 3300049743 Ga0501081_0254156 Ga0501081_0254156_238_1098 286
179 3300049824 Ga0501045_0416659 Ga0501045_0416659_108_968 286
180 3300061734 Ga0530510_0116211 Ga0530510_0116211_23_883 286
181 3300005937 Ga0081455_10308644 Ga0081455_103086442 287
182 3300006844 Ga0075428_100416898 Ga0075428_1004168982 288
183 3300041408 Ga0439453_0017138 Ga0439453_0017138_339_1205 288
184 3300031548 Ga0307408_100010010 Ga0307408_1000100104 289
185 3300049588 Ga0501072_0039569 Ga0501072_0039569_2683_3552 289
186 3300059421 Ga0590071_000206 Ga0590071_000206_14919_15788 289
187 3300059423 Ga0590074_015143 Ga0590074_015143_45_914 289
188 3300059424 Ga0590075_000228 Ga0590075_000228_136_1005 289
189 3300059426 Ga0590077_000235 Ga0590077_000235_6714_7583 289
190 3300005290 Ga0065712_10070711 Ga0065712_100707112 290
191 3300005329 Ga0070683_100007104 Ga0070683_1000071047 290
192 3300005344 Ga0070661_100075651 Ga0070661_1000756512 290
193 3300005455 Ga0070663_100016028 Ga0070663_1000160282 290
194 3300005457 Ga0070662_100145419 Ga0070662_1001454192 290
195 3300005535 Ga0070684_100002256 Ga0070684_1000022565 290
196 3300005543 Ga0070672_100051969 Ga0070672_1000519692 290
197 3300005564 Ga0070664_100000081 Ga0070664_10000008122 290
198 3300006871 Ga0075434_100011753 Ga0075434_1000117538 290
199 3300025920 Ga0207649_10047974 Ga0207649_100479743 290
200 3300025925 Ga0207650_10045352 Ga0207650_100453524 290
201 3300025933 Ga0207706_10196977 Ga0207706_101969772 290
202 3300025944 Ga0207661_10007652 Ga0207661_100076526 290
203 3300025945 Ga0207679_10003627 Ga0207679_100036277 290
204 3300026067 Ga0207678_10020397 Ga0207678_100203976 290
205 3300042876 Ga0451577_0020373 Ga0451577_0020373_3143_4015 290
206 3300048907 Ga0496104_0017213 Ga0496104_0017213_4400_5272 290
207 3300048911 Ga0496108_0013540 Ga0496108_0013540_4353_5225 290
208 3300048912 Ga0496109_0025891 Ga0496109_0025891_174_1046 290
209 3300048913 Ga0496110_0000315 Ga0496110_0000315_8764_9636 290
210 3300048914 Ga0496111_0001017 Ga0496111_0001017_3700_4572 290
211 3300048915 Ga0496112_0016499 Ga0496112_0016499_1842_2714 290
212 3300050512 nmdc:mga0n895_10735_c1 nmdc:mga0n895_10735_c1_5061_5933 290
213 3300050512 nmdc:mga0n895_317351_c1 nmdc:mga0n895_317351_c1_301_1173 290
214 3300050515 nmdc:mga0a205_7556_c1 nmdc:mga0a205_7556_c1_1342_2214 290
215 3300059424 Ga0590075_033848 Ga0590075_033848_251_1123 290
216 3300005295 Ga0065707_10149304 Ga0065707_101493042 291
217 3300005530 Ga0070679_100210116 Ga0070679_1002101162 291
218 3300027876 Ga0209974_10051871 Ga0209974_100518712 291
219 3300006871 Ga0075434_100095570 Ga0075434_1000955702 292
220 3300050512 nmdc:mga0n895_241474_c1 nmdc:mga0n895_241474_c1_344_1222 292
221 3300005293 Ga0065715_10201243 Ga0065715_102012432 293
222 3300005293 Ga0065715_10233910 Ga0065715_102339101 293
223 3300006852 Ga0075433_10046337 Ga0075433_100463372 293
224 3300006871 Ga0075434_100411661 Ga0075434_1004116612 293
225 3300007076 Ga0075435_100108959 Ga0075435_1001089592 293
226 3300041999 Ga0439433_0020536 Ga0439433_0020536_265_1146 293
227 3300050512 nmdc:mga0n895_92872_c1 nmdc:mga0n895_92872_c1_1505_2386 293
228 3300005293 Ga0065715_10208789 Ga0065715_102087891 294
229 3300005353 Ga0070669_100000449 Ga0070669_1000004492 294
230 3300005354 Ga0070675_100180341 Ga0070675_1001803411 294
231 3300005844 Ga0068862_100023803 Ga0068862_1000238035 294
232 3300006844 Ga0075428_100011822 Ga0075428_1000118226 294
233 3300006880 Ga0075429_100181542 Ga0075429_1001815422 294
234 3300009094 Ga0111539_10006238 Ga0111539_100062389 294
235 3300009094 Ga0111539_10224356 Ga0111539_102243562 294
236 3300009147 Ga0114129_10025441 Ga0114129_100254413 294
237 3300009553 Ga0105249_10011641 Ga0105249_100116415 294
238 3300014326 Ga0157380_10221048 Ga0157380_102210482 294
239 3300025315 Ga0207697_10029929 Ga0207697_100299292 294
240 3300025923 Ga0207681_10006665 Ga0207681_100066652 294
241 3300025961 Ga0207712_10011601 Ga0207712_100116012 294
242 3300026116 Ga0207674_10009058 Ga0207674_1000905810 294
243 3300028380 Ga0268265_10028823 Ga0268265_100288232 294
244 3300050507 nmdc:mga05p37_32478_c1 nmdc:mga05p37_32478_c1_4406_5290 294
245 3300050508 nmdc:mga09592_128199_c1 nmdc:mga09592_128199_c1_187_1071 294
246 3300050511 nmdc:mga08y16_499666_c1 nmdc:mga08y16_499666_c1_308_1192 294
247 3300050511 nmdc:mga08y16_85629_c1 nmdc:mga08y16_85629_c1_813_1697 294
248 3300026118 Ga0207675_100031786 Ga0207675_1000317862 296
249 3300028380 Ga0268265_10333037 Ga0268265_103330372 296
250 3300002459 JGI24751J29686_10011159 JGI24751J29686_100111592 306
251 3300005331 Ga0070670_100021238 Ga0070670_1000212382 306
252 3300025925 Ga0207650_10014123 Ga0207650_100141232 306

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

5

301

0.72

PF12730

ABC2_membrane_4

ABC-2 family transporter protein

42

228

0.57

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o16-assembly1.cif.gz_D abc transporter nosdfy, nucleotide-free in lipid nanodisc, r-domain 3 0.715 33 300
7znq-assembly1.cif.gz_Y abc transporter complex nosdfyl in gdn 0.7148 33 301
7o16-assembly1.cif.gz_D abc transporter nosdfy, nucleotide-free in lipid nanodisc, r-domain 3 0.7103 33 300
7znq-assembly1.cif.gz_Y abc transporter complex nosdfyl in gdn 0.7102 33 301
8wbx-assembly1.cif.gz_B cryo-em structure of the abcg25 bound to aba 0.6902 30 300
ID Description Score Start End Superfamily
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5561 95 296 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5003 89 297 3.40.1710.10
af_Q2G1V6_3_205_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.4954 29 297 1.10.3720.10
af_Q2G1V6_3_205_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.4852 29 297 1.10.3720.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.3767 95 296 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A2G4JIQ0-F1-model_v4 ABC transporter permease 0.92 26 306 GO:0005886
GO:0140359
AF-A0A1F5B9I0-F1-model_v4 ABC transporter permease 0.9156 32 306 GO:0005886
GO:0140359
AF-A0A2G4JIQ0-F1-model_v4 ABC transporter permease 0.9132 26 306 GO:0005886
GO:0140359
AF-A0A1F5B9I0-F1-model_v4 ABC transporter permease 0.9089 32 306 GO:0005886
GO:0140359
AF-A0A257V552-F1-model_v4 ABC-2 type transporter domain-containing protein 0.9086 32 299 GO:0016020

Feature Viewer

pLDDT pTM Quality
71.21 0.69 Medium
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Predicted Structure (AlphaFold2)

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