F363073

General Info

Members Datasets Scaffolds Average Seq Length
252 192 245 180

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100081581|Ga0070699_1000815814
Length 209
Sequence MIDVRDLWLTADHDVRSAGRRQLERAMAKVDQGTEKRYVYKMMDSPVGRLTLVATDEGLAGILWENDRPSRVRLNIEAEDTRHPVLIETERQLKEYFAGQRKEFALSLDLAGTAFQRKVWNALLTIPFGETRSYGQIARQIGSPGAVRAVGAANGRNPVSIIAPCHRVIGSTGQLTGFGGGLDAKARLLALEGVKPELPGLSERAANRR

Samples

Sample ID Description Type Environment
1 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
2 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
3 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
4 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
5 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
6 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
7 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
8 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
9 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
10 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
11 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
15 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
16 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
17 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
29 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
54 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
55 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
56 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
57 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
65 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
66 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
67 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
68 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
69 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
70 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
71 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
72 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
73 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
74 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
75 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
76 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
78 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
79 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
80 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
84 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
85 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
86 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
87 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
88 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
89 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
90 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
91 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
92 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
93 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
95 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
97 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
98 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
99 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
130 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
134 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
135 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
136 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
137 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
138 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
139 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
140 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
141 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
142 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
143 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
144 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
145 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
146 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
147 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
148 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
149 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
150 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
151 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
155 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
172 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
173 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
174 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
175 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
176 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
177 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
178 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
179 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
180 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
181 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
189 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
190 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.22
Metatranscriptomes 0
Isolates 2.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.16
Nodule 0.4
Rhizoplane 3.57
Rhizosphere 76.98
Stem 0
Stem Tuber 0
Unclassified 13.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000438 3300002704 Bacteria 10934
2 JGI25156J39149_1000387 3300002705 Bacteria 27718
3 JGI25156J39149_1008379 3300002705 Bacteria 2608
4 JGI25154J39366_1000254 3300002738 Bacteria 34119
5 JGI25154J39366_1000325 3300002738 Bacteria 27718
6 JGI25157J39369_1000650 3300002741 Bacteria 19365
7 JGI25157J39369_1001229 3300002741 Bacteria 10624
8 rootH2_10010167 3300003320 Bacteria 12620
9 rootH2_10119624 3300003320 Unclassified 1490
10 rootH1_10221345 3300003323 Bacteria 1132
11 Ga0055532_1000296 3300003758 Bacteria 30822
12 Ga0055535_1006204 3300003761 Bacteria 2467
13 Ga0065712_10163601 3300005290 Bacteria 1286
14 Ga0065707_10410587 3300005295 Unclassified 842
15 Ga0068869_100105735 3300005334 Bacteria 2135
16 Ga0070666_10330926 3300005335 Bacteria 1088
17 Ga0070666_10865269 3300005335 Bacteria 667
18 Ga0068868_100013370 3300005338 Bacteria 6020
19 Ga0068868_100766237 3300005338 Bacteria 868
20 Ga0070660_100127270 3300005339 Bacteria 2036
21 Ga0070689_100077684 3300005340 Bacteria 2602
22 Ga0070674_100307940 3300005356 Bacteria 1265
23 Ga0070659_100246192 3300005366 Bacteria 1481
24 Ga0070709_10000614 3300005434 Bacteria 20491
25 Ga0070714_100019254 3300005435 Bacteria 5555
26 Ga0070713_100025265 3300005436 Bacteria 4641
27 Ga0070710_10001338 3300005437 Bacteria 11626
28 Ga0070711_100019576 3300005439 Bacteria 4344
29 Ga0070681_10610993 3300005458 Bacteria 1005
30 Ga0068867_100261128 3300005459 Unclassified 1412
31 Ga0070706_100588733 3300005467 Unclassified 1034
32 Ga0070698_100030190 3300005471 Bacteria 5623
33 Ga0070698_101560897 3300005471 Unclassified 612
34 Ga0070699_100081581 3300005518 Bacteria 2819
35 Ga0070679_100036241 3300005530 Bacteria 4895
36 Ga0070696_101049625 3300005546 Bacteria 683
37 Ga0070665_100048644 3300005548 Bacteria 4256
38 Ga0070665_100065806 3300005548 Bacteria 3635
39 Ga0070704_100473084 3300005549 Unclassified 1083
40 Ga0068855_100059384 3300005563 Bacteria 4475
41 Ga0068855_100147006 3300005563 Bacteria 2682
42 Ga0068855_101127382 3300005563 Unclassified 819
43 Ga0070664_100550038 3300005564 Bacteria 1067
44 Ga0070664_100658919 3300005564 Bacteria 973
45 Ga0068854_100495169 3300005578 Bacteria 1028
46 Ga0068856_100139138 3300005614 Bacteria 2434
47 Ga0068856_100205143 3300005614 Bacteria 1986
48 Ga0068852_100234222 3300005616 Bacteria 1752
49 Ga0068859_100194056 3300005617 Unclassified 2115
50 Ga0068859_100707284 3300005617 Bacteria 1098
51 Ga0068859_100814005 3300005617 Bacteria 1021
52 Ga0068859_100950971 3300005617 Bacteria 942
53 Ga0068864_100315001 3300005618 Bacteria 1468
54 Ga0068864_100796892 3300005618 Bacteria 928
55 Ga0068851_10751587 3300005834 Bacteria 603
56 Ga0068870_10249271 3300005840 Bacteria 1100
57 Ga0068863_100080316 3300005841 Bacteria 3089
58 Ga0068858_100398019 3300005842 Unclassified 1323
59 Ga0068860_100544662 3300005843 Bacteria 1162
60 Ga0068862_101196780 3300005844 Bacteria 758
61 Ga0070717_10001937 3300006028 Bacteria 14441
62 Ga0075368_10034616 3300006042 Bacteria 1969
63 Ga0070715_10028255 3300006163 Bacteria 2248
64 Ga0070716_100004197 3300006173 Bacteria 6854
65 Ga0070712_100075022 3300006175 Bacteria 2431
66 Ga0075367_10032980 3300006178 Bacteria 2982
67 Ga0075366_10010941 3300006195 Bacteria 5107
68 Ga0097621_100102912 3300006237 Bacteria 2405
69 Ga0097621_101076870 3300006237 Bacteria 754
70 Ga0068871_100050252 3300006358 Bacteria 3373
71 Ga0068871_100344904 3300006358 Unclassified 1316
72 Ga0075428_100852171 3300006844 Bacteria 968
73 Ga0075430_100027614 3300006846 Bacteria 4822
74 Ga0075431_100073598 3300006847 Bacteria 3525
75 Ga0075433_10002640 3300006852 Bacteria 13688
76 Ga0075433_10382625 3300006852 Unclassified 1242
77 Ga0075434_100003468 3300006871 Bacteria 14097
78 Ga0075429_100011309 3300006880 Bacteria 7728
79 Ga0068865_100038310 3300006881 Bacteria 3244
80 Ga0075436_100173706 3300006914 Bacteria 1521
81 Ga0097620_100194056 3300006931 Unclassified 2115
82 Ga0097620_100707335 3300006931 Bacteria 1098
83 Ga0097620_100814084 3300006931 Bacteria 1021
84 Ga0097620_100951063 3300006931 Bacteria 942
85 Ga0075435_100001236 3300007076 Bacteria 16371
86 Ga0105251_10067509 3300009011 Bacteria 1670
87 Ga0105240_10072514 3300009093 Bacteria 4256
88 Ga0105240_10211132 3300009093 Bacteria 2268
89 Ga0105240_10377068 3300009093 Bacteria 1602
90 Ga0105240_10677064 3300009093 Bacteria 1128
91 Ga0111539_10000640 3300009094 Bacteria 45232
92 Ga0111539_10123376 3300009094 Bacteria 3036
93 Ga0105245_10003642 3300009098 Bacteria 13753
94 Ga0105247_10062460 3300009101 Bacteria 2311
95 Ga0114129_10002519 3300009147 Bacteria 25430
96 Ga0114129_10006182 3300009147 Bacteria 16992
97 Ga0105242_10006013 3300009176 Bacteria 9356
98 Ga0105248_10024332 3300009177 Bacteria 6734
99 Ga0105248_10166990 3300009177 Bacteria 2480
100 Ga0105248_10272987 3300009177 Bacteria 1904
101 Ga0105237_10110545 3300009545 Bacteria 2740
102 Ga0105237_10591670 3300009545 Unclassified 1116
103 Ga0105238_10027931 3300009551 Bacteria 5750
104 Ga0105238_10169486 3300009551 Bacteria 2159
105 Ga0105238_11084189 3300009551 Bacteria 823
106 Ga0105249_10819945 3300009553 Bacteria 995
107 Ga0105249_11254587 3300009553 Bacteria 812
108 Ga0105239_10023223 3300010375 Bacteria 6834
109 Ga0157327_1001385 3300012512 Bacteria 1509
110 Ga0157374_10009909 3300013296 Bacteria 8180
111 Ga0157378_10735417 3300013297 Bacteria 1008
112 Ga0163162_10026553 3300013306 Bacteria 5723
113 Ga0157372_11589981 3300013307 Bacteria 753
114 Ga0182008_10079862 3300014497 Bacteria 1609
115 Ga0157379_10174601 3300014968 Bacteria 1940
116 Ga0157376_10040832 3300014969 Bacteria 3794
117 Ga0157376_10164449 3300014969 Unclassified 2015
118 Ga0182006_1154844 3300015261 Bacteria 775
119 Ga0209435_100018 3300025206 Bacteria 274625
120 Ga0209435_101229 3300025206 Bacteria 3431
121 Ga0209147_100051 3300025229 Bacteria 274605
122 Ga0209437_100117 3300025233 Bacteria 209271
123 Ga0209258_100540 3300025242 Bacteria 35122
124 Ga0209646_1000090 3300025246 Bacteria 189912
125 Ga0209646_1000105 3300025246 Bacteria 163453
126 Ga0209026_1000042 3300025250 Bacteria 273111
127 Ga0209026_1011441 3300025250 Bacteria 1599
128 Ga0209759_1000538 3300025256 Bacteria 39836
129 Ga0209759_1000625 3300025256 Bacteria 33672
130 Ga0209455_1003204 3300025272 Bacteria 5916
131 Ga0207692_10000617 3300025898 Bacteria 12512
132 Ga0207680_10062818 3300025903 Bacteria 2270
133 Ga0207680_10791469 3300025903 Bacteria 680
134 Ga0207685_10014911 3300025905 Bacteria 2446
135 Ga0207699_10000483 3300025906 Bacteria 20176
136 Ga0207705_10169053 3300025909 Bacteria 1646
137 Ga0207695_10066495 3300025913 Bacteria 3702
138 Ga0207695_10142804 3300025913 Bacteria 2340
139 Ga0207671_10430324 3300025914 Unclassified 1050
140 Ga0207693_10003361 3300025915 Bacteria 13661
141 Ga0207663_10011318 3300025916 Bacteria 4788
142 Ga0207660_10194635 3300025917 Bacteria 1581
143 Ga0207657_10427561 3300025919 Bacteria 1040
144 Ga0207652_10257330 3300025921 Bacteria 1574
145 Ga0207694_10003091 3300025924 Bacteria 13326
146 Ga0207650_10191767 3300025925 Bacteria 1633
147 Ga0207659_10139815 3300025926 Bacteria 1879
148 Ga0207687_10014848 3300025927 Bacteria 5100
149 Ga0207700_10000175 3300025928 Bacteria 38523
150 Ga0207664_10000254 3300025929 Bacteria 40157
151 Ga0207686_10061908 3300025934 Bacteria 2374
152 Ga0207670_10069093 3300025936 Bacteria 2436
153 Ga0207670_11581467 3300025936 Bacteria 558
154 Ga0207704_10177117 3300025938 Bacteria 1537
155 Ga0207665_10001164 3300025939 Bacteria 17674
156 Ga0207711_10053168 3300025941 Bacteria 3473
157 Ga0207711_10119954 3300025941 Bacteria 2347
158 Ga0207711_10952529 3300025941 Unclassified 797
159 Ga0207667_10010939 3300025949 Bacteria 10574
160 Ga0207667_10479074 3300025949 Bacteria 1263
161 Ga0207667_10984450 3300025949 Bacteria 831
162 Ga0207677_10014222 3300026023 Bacteria 4639
163 Ga0207677_10569241 3300026023 Bacteria 990
164 Ga0207703_10790772 3300026035 Unclassified 905
165 Ga0207641_10678879 3300026088 Bacteria 1013
166 Ga0207648_10218925 3300026089 Bacteria 1692
167 Ga0207676_10137675 3300026095 Bacteria 2086
168 Ga0209813_10165202 3300027866 Bacteria 801
169 Ga0207428_10014433 3300027907 Bacteria 6865
170 Ga0268266_10030424 3300028379 Bacteria 4587
171 Ga0268266_10032855 3300028379 Bacteria 4409
172 Ga0268264_10488696 3300028381 Bacteria 1199
173 Ga0307408_100008097 3300031548 Bacteria 6947
174 Ga0307408_100179568 3300031548 Bacteria 1696
175 Ga0307412_10062770 3300031911 Bacteria 2503
176 Ga0307412_10689709 3300031911 Bacteria 875
177 Ga0307416_100209057 3300032002 Bacteria 1859
178 Ga0307414_10501946 3300032004 Bacteria 1073
179 Ga0307411_10043631 3300032005 Bacteria 2870
180 Ga0373943_0080234 3300035170 Bacteria 1672
181 Ga0373946_0402688 3300035171 Bacteria 691
182 Ga0373937_0061570 3300036401 Bacteria 3450
183 Ga0373937_1353676 3300036401 Bacteria 660
184 Ga0373925_0769103 3300037068 Unclassified 794
185 Ga0439441_011374 3300042001 Bacteria 1509
186 Ga0450920_005437 3300042122 Bacteria 2264
187 Ga0439464_0008005 3300042439 Bacteria 2772
188 Ga0495651_0160848 3300046462 Bacteria 1609
189 Ga0495653_0063103 3300046463 Bacteria 2798
190 Ga0495585_0139537 3300046492 Bacteria 1270
191 Ga0495608_0161087 3300046511 Bacteria 1427
192 Ga0495618_0532821 3300046514 Unclassified 705
193 Ga0495628_0434247 3300046516 Bacteria 955
194 Ga0495628_0521637 3300046516 Bacteria 856
195 Ga0495663_0051611 3300046525 Bacteria 1275
196 Ga0495645_0097462 3300046543 Bacteria 2094
197 Ga0495625_0001388 3300046660 Bacteria 29712
198 Ga0495684_0085883 3300047471 Bacteria 2386
199 Ga0495593_0432944 3300047673 Unclassified 658
200 Ga0496100_0424379 3300048903 Bacteria 1016
201 Ga0496102_0711268 3300048905 Bacteria 927
202 Ga0496104_0311437 3300048907 Bacteria 1487
203 Ga0496106_0147870 3300048909 Bacteria 1852
204 Ga0496108_0892272 3300048911 Bacteria 763
205 Ga0496111_0797740 3300048914 Bacteria 683
206 Ga0496112_0493462 3300048915 Bacteria 1160
207 Ga0496114_0046221 3300048917 Bacteria 3618
208 Ga0496114_0086622 3300048917 Bacteria 2655
209 Ga0496116_0000180 3300048919 Bacteria 126589
210 Ga0496117_0126463 3300048920 Bacteria 1559
211 Ga0496118_0109792 3300048921 Bacteria 1834
212 Ga0496119_0000056 3300048922 Bacteria 174042
213 Ga0496119_0001991 3300048922 Bacteria 23154
214 Ga0496120_0000046 3300048923 Bacteria 190675
215 Ga0496120_0000063 3300048923 Bacteria 170325
216 Ga0496121_0041597 3300048924 Bacteria 4014
217 Ga0496121_0240068 3300048924 Bacteria 1263
218 Ga0496122_0001194 3300048925 Bacteria 44317
219 Ga0496123_0000532 3300048926 Bacteria 65557
220 Ga0496125_0119287 3300048928 Bacteria 1886
221 Ga0496125_0378999 3300048928 Bacteria 834
222 Ga0501294_027621 3300049517 Bacteria 647
223 Ga0501299_006863 3300049522 Bacteria 1798
224 Ga0501299_026460 3300049522 Bacteria 1095
225 Ga0501068_0576075 3300049584 Bacteria 733
226 Ga0501075_0917224 3300049591 Bacteria 666
227 Ga0501217_121800 3300049661 Bacteria 758
228 Ga0501233_015192 3300049668 Bacteria 1583
229 Ga0501225_0044652 3300049705 Bacteria 1226
230 nmdc:mga0k408_13537_c1 3300050493 Bacteria 4477
231 nmdc:mga04h51_152026_c1 3300050495 Bacteria 885
232 nmdc:mga05p37_14515_c1 3300050507 Bacteria 9459
233 nmdc:mga05p37_15553_c1 3300050507 Bacteria 9146
234 nmdc:mga09592_93966_c1 3300050508 Bacteria 2565
235 nmdc:mga0qj67_36399_c1 3300050509 Bacteria 3850
236 nmdc:mga06r32_22183_c1 3300050510 Bacteria 5865
237 nmdc:mga08y16_213778_c1 3300050511 Bacteria 1997
238 nmdc:mga08y16_288_c1 3300050511 Bacteria 45718
239 nmdc:mga0n895_6303_c1 3300050512 Bacteria 10060
240 nmdc:mga0rr50_1084_c1 3300050513 Bacteria 14770
241 nmdc:mga0a205_2011_c1 3300050515 Bacteria 17744
242 Ga0495601_0039203 3300053077 Bacteria 2966
243 Ga0495601_0115549 3300053077 Bacteria 1740
244 Ga0495619_0043784 3300053085 Bacteria 2936
245 Ga0500637_0000636 3300053178 Bacteria 13896

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300012512 Ga0157327_1001385 Ga0157327_10013852 158
2 3300046525 Ga0495663_0051611 Ga0495663_0051611_649_1251 158
3 3300048911 Ga0496108_0892272 Ga0496108_0892272_29_598 158
4 3300048914 Ga0496111_0797740 Ga0496111_0797740_98_667 158
5 3300005356 Ga0070674_100307940 Ga0070674_1003079402 160
6 3300005290 Ga0065712_10163601 Ga0065712_101636011 162
7 3300005564 Ga0070664_100658919 Ga0070664_1006589192 162
8 3300006237 Ga0097621_101076870 Ga0097621_1010768702 162
9 3300006844 Ga0075428_100852171 Ga0075428_1008521712 162
10 3300006846 Ga0075430_100027614 Ga0075430_1000276143 162
11 3300006847 Ga0075431_100073598 Ga0075431_1000735982 162
12 3300006852 Ga0075433_10002640 Ga0075433_100026409 162
13 3300006871 Ga0075434_100003468 Ga0075434_1000034689 162
14 3300006880 Ga0075429_100011309 Ga0075429_1000113094 162
15 3300006914 Ga0075436_100173706 Ga0075436_1001737062 162
16 3300007076 Ga0075435_100001236 Ga0075435_1000012367 162
17 3300009094 Ga0111539_10000640 Ga0111539_100006402 162
18 3300009094 Ga0111539_10123376 Ga0111539_101233763 162
19 3300009147 Ga0114129_10002519 Ga0114129_1000251912 162
20 3300009147 Ga0114129_10006182 Ga0114129_100061828 162
21 3300027907 Ga0207428_10014433 Ga0207428_100144333 162
22 3300031548 Ga0307408_100008097 Ga0307408_1000080976 162
23 3300031548 Ga0307408_100179568 Ga0307408_1001795682 162
24 3300031911 Ga0307412_10062770 Ga0307412_100627703 162
25 3300031911 Ga0307412_10689709 Ga0307412_106897092 162
26 3300032002 Ga0307416_100209057 Ga0307416_1002090572 162
27 3300032005 Ga0307411_10043631 Ga0307411_100436312 162
28 3300037068 Ga0373925_0769103 Ga0373925_0769103_55_573 162
29 3300042001 Ga0439441_011374 Ga0439441_011374_290_817 162
30 3300042439 Ga0439464_0008005 Ga0439464_0008005_1752_2279 162
31 3300049517 Ga0501294_027621 Ga0501294_027621_29_556 162
32 3300049522 Ga0501299_006863 Ga0501299_006863_575_1102 162
33 3300049522 Ga0501299_026460 Ga0501299_026460_19_534 162
34 3300049591 Ga0501075_0917224 Ga0501075_0917224_59_574 162
35 3300049661 Ga0501217_121800 Ga0501217_121800_169_684 162
36 3300049668 Ga0501233_015192 Ga0501233_015192_600_1115 162
37 3300049705 Ga0501225_0044652 Ga0501225_0044652_580_1095 162
38 3300050507 nmdc:mga05p37_14515_c1 nmdc:mga05p37_14515_c1_454_978 162
39 3300050507 nmdc:mga05p37_15553_c1 nmdc:mga05p37_15553_c1_6293_6820 162
40 3300050508 nmdc:mga09592_93966_c1 nmdc:mga09592_93966_c1_695_1222 162
41 3300050509 nmdc:mga0qj67_36399_c1 nmdc:mga0qj67_36399_c1_1467_1994 162
42 3300050510 nmdc:mga06r32_22183_c1 nmdc:mga06r32_22183_c1_3630_4157 162
43 3300050511 nmdc:mga08y16_213778_c1 nmdc:mga08y16_213778_c1_885_1412 162
44 3300050511 nmdc:mga08y16_288_c1 nmdc:mga08y16_288_c1_188_715 162
45 3300050512 nmdc:mga0n895_6303_c1 nmdc:mga0n895_6303_c1_3801_4325 162
46 3300050513 nmdc:mga0rr50_1084_c1 nmdc:mga0rr50_1084_c1_8189_8713 162
47 3300050515 nmdc:mga0a205_2011_c1 nmdc:mga0a205_2011_c1_10391_10915 162
48 3300005339 Ga0070660_100127270 Ga0070660_1001272702 163
49 3300005434 Ga0070709_10000614 Ga0070709_1000061411 163
50 3300005435 Ga0070714_100019254 Ga0070714_1000192544 163
51 3300005436 Ga0070713_100025265 Ga0070713_1000252653 163
52 3300005437 Ga0070710_10001338 Ga0070710_1000133810 163
53 3300005439 Ga0070711_100019576 Ga0070711_1000195763 163
54 3300005563 Ga0068855_101127382 Ga0068855_1011273822 163
55 3300006028 Ga0070717_10001937 Ga0070717_1000193714 163
56 3300006163 Ga0070715_10028255 Ga0070715_100282552 163
57 3300006173 Ga0070716_100004197 Ga0070716_1000041974 163
58 3300006175 Ga0070712_100075022 Ga0070712_1000750222 163
59 3300013307 Ga0157372_11589981 Ga0157372_115899811 163
60 3300025898 Ga0207692_10000617 Ga0207692_100006179 163
61 3300025905 Ga0207685_10014911 Ga0207685_100149112 163
62 3300025906 Ga0207699_10000483 Ga0207699_100004835 163
63 3300025915 Ga0207693_10003361 Ga0207693_100033618 163
64 3300025916 Ga0207663_10011318 Ga0207663_100113183 163
65 3300025919 Ga0207657_10427561 Ga0207657_104275612 163
66 3300025928 Ga0207700_10000175 Ga0207700_100001752 163
67 3300025929 Ga0207664_10000254 Ga0207664_1000025431 163
68 3300025939 Ga0207665_10001164 Ga0207665_1000116417 163
69 3300005548 Ga0070665_100048644 Ga0070665_1000486445 164
70 3300005834 Ga0068851_10751587 Ga0068851_107515871 164
71 3300005840 Ga0068870_10249271 Ga0068870_102492711 164
72 3300009177 Ga0105248_10272987 Ga0105248_102729872 164
73 3300025941 Ga0207711_10053168 Ga0207711_100531684 164
74 3300026023 Ga0207677_10569241 Ga0207677_105692412 164
75 3300028379 Ga0268266_10030424 Ga0268266_100304242 164
76 3300042122 Ga0450920_005437 Ga0450920_005437_1102_1632 164
77 3300048919 Ga0496116_0000180 Ga0496116_0000180_124121_124627 164
78 3300048922 Ga0496119_0000056 Ga0496119_0000056_171442_171948 164
79 3300048922 Ga0496119_0001991 Ga0496119_0001991_2009_2515 164
80 3300048923 Ga0496120_0000046 Ga0496120_0000046_188141_188647 164
81 3300048923 Ga0496120_0000063 Ga0496120_0000063_165241_165747 164
82 3300053178 Ga0500637_0000636 Ga0500637_0000636_10224_10733 164
83 3300003320 rootH2_10010167 rootH2_100101678 165
84 3300003323 rootH1_10221345 rootH1_102213452 165
85 3300005340 Ga0070689_100077684 Ga0070689_1000776842 165
86 3300005614 Ga0068856_100139138 Ga0068856_1001391382 165
87 3300005617 Ga0068859_100814005 Ga0068859_1008140052 165
88 3300006931 Ga0097620_100814084 Ga0097620_1008140842 165
89 3300009093 Ga0105240_10677064 Ga0105240_106770642 165
90 3300009551 Ga0105238_10027931 Ga0105238_100279312 165
91 3300013297 Ga0157378_10735417 Ga0157378_107354171 165
92 3300025924 Ga0207694_10003091 Ga0207694_100030918 165
93 3300025926 Ga0207659_10139815 Ga0207659_101398152 165
94 3300025936 Ga0207670_10069093 Ga0207670_100690932 165
95 3300003320 rootH2_10119624 rootH2_101196242 166
96 3300005295 Ga0065707_10410587 Ga0065707_104105871 166
97 3300005334 Ga0068869_100105735 Ga0068869_1001057352 166
98 3300005366 Ga0070659_100246192 Ga0070659_1002461921 166
99 3300005458 Ga0070681_10610993 Ga0070681_106109931 166
100 3300005471 Ga0070698_101560897 Ga0070698_1015608971 166
101 3300005530 Ga0070679_100036241 Ga0070679_1000362412 166
102 3300005546 Ga0070696_101049625 Ga0070696_1010496251 166
103 3300005549 Ga0070704_100473084 Ga0070704_1004730841 166
104 3300005563 Ga0068855_100059384 Ga0068855_1000593845 166
105 3300005616 Ga0068852_100234222 Ga0068852_1002342222 166
106 3300005617 Ga0068859_100194056 Ga0068859_1001940562 166
107 3300005842 Ga0068858_100398019 Ga0068858_1003980192 166
108 3300006358 Ga0068871_100344904 Ga0068871_1003449043 166
109 3300006931 Ga0097620_100194056 Ga0097620_1001940562 166
110 3300009177 Ga0105248_10166990 Ga0105248_101669902 166
111 3300009553 Ga0105249_10819945 Ga0105249_108199452 166
112 3300025909 Ga0207705_10169053 Ga0207705_101690531 166
113 3300025917 Ga0207660_10194635 Ga0207660_101946352 166
114 3300025921 Ga0207652_10257330 Ga0207652_102573302 166
115 3300025941 Ga0207711_10952529 Ga0207711_109525291 166
116 3300025949 Ga0207667_10479074 Ga0207667_104790743 166
117 3300026035 Ga0207703_10790772 Ga0207703_107907721 166
118 3300046511 Ga0495608_0161087 Ga0495608_0161087_299_832 166
119 3300006042 Ga0075368_10034616 Ga0075368_100346162 167
120 3300006178 Ga0075367_10032980 Ga0075367_100329802 167
121 3300006195 Ga0075366_10010941 Ga0075366_100109413 167
122 3300009553 Ga0105249_11254587 Ga0105249_112545872 167
123 3300027866 Ga0209813_10165202 Ga0209813_101652021 167
124 3300036401 Ga0373937_1353676 Ga0373937_1353676_68_613 167
125 3300050493 nmdc:mga0k408_13537_c1 nmdc:mga0k408_13537_c1_2305_2871 167
126 3300050495 nmdc:mga04h51_152026_c1 nmdc:mga04h51_152026_c1_224_790 167
127 3300005335 Ga0070666_10330926 Ga0070666_103309262 168
128 3300005338 Ga0068868_100013370 Ga0068868_1000133702 168
129 3300005459 Ga0068867_100261128 Ga0068867_1002611282 168
130 3300005548 Ga0070665_100065806 Ga0070665_1000658062 168
131 3300005617 Ga0068859_100950971 Ga0068859_1009509711 168
132 3300005618 Ga0068864_100315001 Ga0068864_1003150012 168
133 3300005841 Ga0068863_100080316 Ga0068863_1000803163 168
134 3300005843 Ga0068860_100544662 Ga0068860_1005446621 168
135 3300006237 Ga0097621_100102912 Ga0097621_1001029121 168
136 3300006358 Ga0068871_100050252 Ga0068871_1000502522 168
137 3300006881 Ga0068865_100038310 Ga0068865_1000383101 168
138 3300006931 Ga0097620_100951063 Ga0097620_1009510632 168
139 3300009093 Ga0105240_10377068 Ga0105240_103770682 168
140 3300009098 Ga0105245_10003642 Ga0105245_100036429 168
141 3300009101 Ga0105247_10062460 Ga0105247_100624602 168
142 3300009176 Ga0105242_10006013 Ga0105242_100060133 168
143 3300009177 Ga0105248_10024332 Ga0105248_100243324 168
144 3300009551 Ga0105238_11084189 Ga0105238_110841892 168
145 3300013296 Ga0157374_10009909 Ga0157374_100099092 168
146 3300013306 Ga0163162_10026553 Ga0163162_100265532 168
147 3300014968 Ga0157379_10174601 Ga0157379_101746012 168
148 3300014969 Ga0157376_10040832 Ga0157376_100408322 168
149 3300025903 Ga0207680_10062818 Ga0207680_100628182 168
150 3300025927 Ga0207687_10014848 Ga0207687_100148482 168
151 3300025934 Ga0207686_10061908 Ga0207686_100619081 168
152 3300025938 Ga0207704_10177117 Ga0207704_101771171 168
153 3300025941 Ga0207711_10119954 Ga0207711_101199541 168
154 3300026023 Ga0207677_10014222 Ga0207677_100142222 168
155 3300026088 Ga0207641_10678879 Ga0207641_106788791 168
156 3300026089 Ga0207648_10218925 Ga0207648_102189252 168
157 3300026095 Ga0207676_10137675 Ga0207676_101376752 168
158 3300028379 Ga0268266_10032855 Ga0268266_100328553 168
159 3300028381 Ga0268264_10488696 Ga0268264_104886962 168
160 3300035171 Ga0373946_0402688 Ga0373946_0402688_120_653 168
161 3300046462 Ga0495651_0160848 Ga0495651_0160848_203_736 168
162 3300046463 Ga0495653_0063103 Ga0495653_0063103_88_621 168
163 3300046516 Ga0495628_0434247 Ga0495628_0434247_384_917 168
164 3300046543 Ga0495645_0097462 Ga0495645_0097462_1005_1538 168
165 3300047471 Ga0495684_0085883 Ga0495684_0085883_759_1292 168
166 3300048903 Ga0496100_0424379 Ga0496100_0424379_105_644 168
167 3300048917 Ga0496114_0086622 Ga0496114_0086622_425_964 168
168 3300053077 Ga0495601_0039203 Ga0495601_0039203_2331_2882 168
169 3300053077 Ga0495601_0115549 Ga0495601_0115549_91_624 168
170 3300053085 Ga0495619_0043784 Ga0495619_0043784_746_1279 168
171 3300035170 Ga0373943_0080234 Ga0373943_0080234_89_625 169
172 3300036401 Ga0373937_0061570 Ga0373937_0061570_2346_2882 169
173 3300046514 Ga0495618_0532821 Ga0495618_0532821_133_669 169
174 3300047673 Ga0495593_0432944 Ga0495593_0432944_13_549 169
175 3300009545 Ga0105237_10591670 Ga0105237_105916702 170
176 3300010375 Ga0105239_10023223 Ga0105239_100232232 170
177 3300025914 Ga0207671_10430324 Ga0207671_104303242 170
178 3300048907 Ga0496104_0311437 Ga0496104_0311437_483_1004 170
179 3300005338 Ga0068868_100766237 Ga0068868_1007662372 172
180 3300005617 Ga0068859_100707284 Ga0068859_1007072842 172
181 3300005618 Ga0068864_100796892 Ga0068864_1007968922 172
182 3300006931 Ga0097620_100707335 Ga0097620_1007073352 172
183 3300014969 Ga0157376_10164449 Ga0157376_101644492 172
184 3300048917 Ga0496114_0046221 Ga0496114_0046221_1610_2158 172
185 3300046492 Ga0495585_0139537 Ga0495585_0139537_433_960 173
186 3300049584 Ga0501068_0576075 Ga0501068_0576075_80_634 173
187 3300005471 Ga0070698_100030190 Ga0070698_1000301905 174
188 3300005518 Ga0070699_100081581 Ga0070699_1000815814 174
189 3300025936 Ga0207670_11581467 Ga0207670_115814671 174
190 3300046516 Ga0495628_0521637 Ga0495628_0521637_82_636 175
191 3300005467 Ga0070706_100588733 Ga0070706_1005887332 176
192 3300025949 Ga0207667_10984450 Ga0207667_109844501 176
193 3300005335 Ga0070666_10865269 Ga0070666_108652691 178
194 3300006852 Ga0075433_10382625 Ga0075433_103826251 178
195 3300025903 Ga0207680_10791469 Ga0207680_107914691 178
196 3300032004 Ga0307414_10501946 Ga0307414_105019462 178
197 iso_pu_bacteria 2885080285 2885082814 178
198 3300048905 Ga0496102_0711268 Ga0496102_0711268_32_613 180
199 3300048909 Ga0496106_0147870 Ga0496106_0147870_56_637 180
200 3300048915 Ga0496112_0493462 Ga0496112_0493462_46_627 180
201 3300009093 Ga0105240_10211132 Ga0105240_102111322 182
202 3300046660 Ga0495625_0001388 Ga0495625_0001388_1030_1578 182
203 3300048920 Ga0496117_0126463 Ga0496117_0126463_96_644 182
204 3300048921 Ga0496118_0109792 Ga0496118_0109792_472_1020 182
205 3300048924 Ga0496121_0041597 Ga0496121_0041597_968_1516 182
206 3300048925 Ga0496122_0001194 Ga0496122_0001194_908_1456 182
207 3300048926 Ga0496123_0000532 Ga0496123_0000532_22148_22696 182
208 3300048928 Ga0496125_0378999 Ga0496125_0378999_19_567 182
209 3300005844 Ga0068862_101196780 Ga0068862_1011967801 184
210 iso_pu_bacteria 2511231003 2511251004 185
211 iso_pu_bacteria 2818991445 2819595295 185
212 iso_pu_bacteria 2884811622 2884812655 185
213 iso_pu_bacteria 2884836552 2884841135 185
214 iso_pu_bacteria 2884852848 2884856010 185
215 iso_pu_bacteria 2896154374 2896157065 185
216 3300002704 JGI25155J39150_1000438 JGI25155J39150_10004381 189
217 3300002705 JGI25156J39149_1000387 JGI25156J39149_100038725 189
218 3300002705 JGI25156J39149_1008379 JGI25156J39149_10083792 189
219 3300002738 JGI25154J39366_1000254 JGI25154J39366_10002542 189
220 3300002738 JGI25154J39366_1000325 JGI25154J39366_10003252 189
221 3300002741 JGI25157J39369_1000650 JGI25157J39369_10006501 189
222 3300002741 JGI25157J39369_1001229 JGI25157J39369_10012297 189
223 3300003758 Ga0055532_1000296 Ga0055532_10002965 189
224 3300003761 Ga0055535_1006204 Ga0055535_10062042 189
225 3300005563 Ga0068855_100147006 Ga0068855_1001470061 189
226 3300005564 Ga0070664_100550038 Ga0070664_1005500381 189
227 3300005578 Ga0068854_100495169 Ga0068854_1004951691 189
228 3300005614 Ga0068856_100205143 Ga0068856_1002051432 189
229 3300009011 Ga0105251_10067509 Ga0105251_100675092 189
230 3300009093 Ga0105240_10072514 Ga0105240_100725142 189
231 3300009545 Ga0105237_10110545 Ga0105237_101105452 189
232 3300009551 Ga0105238_10169486 Ga0105238_101694863 189
233 3300014497 Ga0182008_10079862 Ga0182008_100798622 189
234 3300015261 Ga0182006_1154844 Ga0182006_11548441 189
235 3300025206 Ga0209435_100018 Ga0209435_100018243 189
236 3300025206 Ga0209435_101229 Ga0209435_1012294 189
237 3300025229 Ga0209147_100051 Ga0209147_100051243 189
238 3300025233 Ga0209437_100117 Ga0209437_10011727 189
239 3300025242 Ga0209258_100540 Ga0209258_1005405 189
240 3300025246 Ga0209646_1000090 Ga0209646_1000090162 189
241 3300025246 Ga0209646_1000105 Ga0209646_1000105117 189
242 3300025250 Ga0209026_1000042 Ga0209026_10000423 189
243 3300025250 Ga0209026_1011441 Ga0209026_10114412 189
244 3300025256 Ga0209759_1000538 Ga0209759_100053833 189
245 3300025256 Ga0209759_1000625 Ga0209759_100062528 189
246 3300025272 Ga0209455_1003204 Ga0209455_10032043 189
247 3300025913 Ga0207695_10066495 Ga0207695_100664952 189
248 3300025913 Ga0207695_10142804 Ga0207695_101428042 189
249 3300025925 Ga0207650_10191767 Ga0207650_101917672 189
250 3300025949 Ga0207667_10010939 Ga0207667_100109399 189
251 3300048924 Ga0496121_0240068 Ga0496121_0240068_379_951 189
252 3300048928 Ga0496125_0119287 Ga0496125_0119287_412_981 189

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01035

DNA_binding_1

6-O-methylguanine DNA methyltransferase, DNA binding domain

114

194

0.99

PF02870

Methyltransf_1N

6-O-methylguanine DNA methyltransferase, ribonuclease-like domain

38

110

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wx9-assembly1.cif.gz_C-4 crystal structure of mycobacterium tuberculosis ogt in complex with dna 0.9459 4 159
4wx9-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis ogt in complex with dna 0.9416 1 157
4wxc-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis ogt-y139f 0.9165 3 157
4bhc-assembly1.cif.gz_A crystal structure of the m. tuberculosis o6-methylguanine methyltransferase r37l variant 0.9153 3 157
4wxd-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis ogt-r37k 0.9141 3 157
ID Description Score Start End Superfamily
af_P26188_97_181_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9902 76 157 1.10.10.10
af_Q4DAC5_49_134_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9659 76 159 1.10.10.10
af_Q5A0Y8_92_172_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9554 76 158 1.10.10.10
5llqB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9527 77 158 1.10.10.10
af_O76339_109_192_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9517 76 159 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A4Q7APJ2-F1-model_v4 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) 0.9983 1 157 GO:0003908
GO:0005737
GO:0006307
GO:0032259
AF-A0A2J7YGG9-F1-model_v4 deleted 0.9978 1 158
AF-A0A1H0QVK4-F1-model_v4 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) 0.9973 3 158 GO:0003908
GO:0005737
GO:0006307
GO:0032259
AF-A0A4Y9SRA5-F1-model_v4 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) 0.9971 1 158 GO:0003908
GO:0005737
GO:0006307
GO:0032259
AF-A0A240EDZ9-F1-model_v4 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) 0.9971 2 157 GO:0003908
GO:0005737
GO:0006307
GO:0032259

Feature Viewer

pLDDT pTM Quality
86.17 0.79 High
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Predicted Structure (AlphaFold2)

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