F363673

General Info

Members Datasets Scaffolds Average Seq Length
252 188 248 249

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2939611941|2939614345
Length 280
Sequence ASQPEHARDRSHPEAAMTTNKSTEDGRKEGRRAMNTPPVVPPQAWEAAREQLLVREKAMTRARDALAAERRRMPWMAVEKSYAFEGPDGKASLLDLFAGRRQLIVYRAFFEPGVHGWPEHACIGCSLGADQVSHLAHLNARDTTLVYASRAPQADIARLKTRMGWEKIPWYTITDSFDADFGVDEWHGHNAFVRDGDRVFRTYFINGRGDEAMGTVWSYLDMTALGRQESWEDSPEGYPQTRPYKWWNWHELYVPGAAIDPEWDKVSEAGEAAFREKHDG

Samples

Sample ID Description Type Environment
1 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
2 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
3 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
45 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
47 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
69 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
80 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
81 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
82 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
83 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
96 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
148 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
165 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
172 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
173 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
174 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
175 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
176 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
177 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
178 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
181 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
182 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
183 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
184 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
185 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
186 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
188 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.41
Metatranscriptomes 0
Isolates 1.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.92
Nodule 0.4
Rhizoplane 1.59
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 4.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000694 3300001979 Bacteria 14599
2 JGI25157J39369_1001003 3300002741 Bacteria 13123
3 Ga0070683_100106089 3300005329 Bacteria 2648
4 Ga0070680_100199928 3300005336 Bacteria 1685
5 Ga0070661_100014007 3300005344 Bacteria 5639
6 Ga0070692_10002595 3300005345 Bacteria 7046
7 Ga0070671_100506433 3300005355 Bacteria 1039
8 Ga0070714_100000107 3300005435 Bacteria 69754
9 Ga0070714_100000125 3300005435 Bacteria 60871
10 Ga0070714_100234316 3300005435 Bacteria 1692
11 Ga0070713_100023602 3300005436 Bacteria 4775
12 Ga0070711_100261879 3300005439 Bacteria 1361
13 Ga0070662_100109678 3300005457 Bacteria 2101
14 Ga0070681_10239360 3300005458 Bacteria 1729
15 Ga0070679_100926337 3300005530 Bacteria 815
16 Ga0068853_100072824 3300005539 Bacteria 2994
17 Ga0068853_100439856 3300005539 Bacteria 1225
18 Ga0070665_100000630 3300005548 Bacteria 47966
19 Ga0070665_100012745 3300005548 Bacteria 8469
20 Ga0068855_100126891 3300005563 Bacteria 2916
21 Ga0068855_100138206 3300005563 Bacteria 2779
22 Ga0068855_100306634 3300005563 Bacteria 1757
23 Ga0068855_100971704 3300005563 Bacteria 894
24 Ga0070664_100205150 3300005564 Bacteria 1760
25 Ga0068856_100014447 3300005614 Bacteria 7627
26 Ga0068856_100984803 3300005614 Bacteria 862
27 Ga0068852_100743893 3300005616 Bacteria 992
28 Ga0068859_100002737 3300005617 Bacteria 17889
29 Ga0068860_100084799 3300005843 Bacteria 3013
30 Ga0081455_10001796 3300005937 Bacteria 25915
31 Ga0075367_10126579 3300006178 Bacteria 1577
32 Ga0075367_10140497 3300006178 Bacteria 1496
33 Ga0075366_10051112 3300006195 Bacteria 2456
34 Ga0075431_100004192 3300006847 Bacteria 14110
35 Ga0075431_100162476 3300006847 Bacteria 2296
36 Ga0075429_100030297 3300006880 Bacteria 4700
37 Ga0075429_100103909 3300006880 Bacteria 2481
38 Ga0097620_100002737 3300006931 Bacteria 17889
39 Ga0111539_10124570 3300009094 Bacteria 3020
40 Ga0111539_10157166 3300009094 Bacteria 2660
41 Ga0114129_10011329 3300009147 Bacteria 12703
42 Ga0105248_10472307 3300009177 Bacteria 1414
43 Ga0105237_10032918 3300009545 Bacteria 5249
44 Ga0105238_10065689 3300009551 Bacteria 3629
45 Ga0105239_10033249 3300010375 Bacteria 5663
46 Ga0157369_10044781 3300013105 Bacteria 4815
47 Ga0157369_10095826 3300013105 Bacteria 3166
48 Ga0157374_10247132 3300013296 Bacteria 1755
49 Ga0163162_10189766 3300013306 Bacteria 2182
50 Ga0163162_10312638 3300013306 Bacteria 1703
51 Ga0157372_10131059 3300013307 Bacteria 2885
52 Ga0157379_10210206 3300014968 Bacteria 1761
53 Ga0182006_1078256 3300015261 Bacteria 1211
54 Ga0182007_10011323 3300015262 Bacteria 3476
55 Ga0224572_1001807 3300024225 Bacteria 3288
56 Ga0209674_104396 3300025226 Bacteria 2304
57 Ga0209026_1000093 3300025250 Bacteria 170393
58 Ga0209759_1025830 3300025256 Bacteria 1242
59 Ga0209233_1004005 3300025261 Bacteria 5103
60 Ga0207647_10014287 3300025904 Bacteria 5477
61 Ga0207643_10015153 3300025908 Bacteria 4194
62 Ga0207707_10213141 3300025912 Bacteria 1682
63 Ga0207695_10325236 3300025913 Bacteria 1427
64 Ga0207671_10038103 3300025914 Bacteria 3563
65 Ga0207657_10029059 3300025919 Bacteria 5037
66 Ga0207649_10002155 3300025920 Bacteria 11135
67 Ga0207700_10016769 3300025928 Bacteria 4877
68 Ga0207700_10097431 3300025928 Bacteria 2337
69 Ga0207664_10000036 3300025929 Bacteria 173396
70 Ga0207664_10001103 3300025929 Bacteria 17980
71 Ga0207664_10119193 3300025929 Bacteria 2206
72 Ga0207644_10169770 3300025931 Bacteria 1702
73 Ga0207644_10582788 3300025931 Bacteria 928
74 Ga0207706_10007596 3300025933 Bacteria 10029
75 Ga0207661_10325206 3300025944 Bacteria 1383
76 Ga0207667_10007681 3300025949 Bacteria 12906
77 Ga0207640_10122977 3300025981 Bacteria 1863
78 Ga0207639_10231382 3300026041 Bacteria 1602
79 Ga0207639_10355842 3300026041 Bacteria 1309
80 Ga0207702_10004911 3300026078 Bacteria 11756
81 Ga0207702_10181301 3300026078 Bacteria 1939
82 Ga0207698_10786239 3300026142 Bacteria 953
83 Ga0268266_10002515 3300028379 Bacteria 19525
84 Ga0268266_10011647 3300028379 Bacteria 7634
85 Ga0268264_10114985 3300028381 Bacteria 2363
86 Ga0265334_10032273 3300028573 Bacteria 2089
87 Ga0265332_10019637 3300031238 Bacteria 2983
88 Ga0307513_10041797 3300031456 Bacteria 5055
89 Ga0307408_100157785 3300031548 Bacteria 1799
90 Ga0307408_100501698 3300031548 Bacteria 1062
91 Ga0307508_10534940 3300031616 Bacteria 769
92 Ga0307405_10103031 3300031731 Bacteria 1918
93 Ga0307406_10676022 3300031901 Bacteria 859
94 Ga0307407_10445663 3300031903 Bacteria 938
95 Ga0307416_100068585 3300032002 Bacteria 2931
96 Ga0307416_100110431 3300032002 Bacteria 2421
97 Ga0307416_100199083 3300032002 Bacteria 1898
98 Ga0307415_100048985 3300032126 Bacteria 2853
99 Ga0373923_0000671 3300035111 Bacteria 8698
100 Ga0373936_0030609 3300035113 Bacteria 2123
101 Ga0373936_0079734 3300035113 Bacteria 1361
102 Ga0373953_0002058 3300035117 Bacteria 5996
103 Ga0373954_0000658 3300035118 Bacteria 13209
104 Ga0373956_0002940 3300035119 Bacteria 6895
105 Ga0373957_0005238 3300035120 Bacteria 4012
106 Ga0373955_0000593 3300035172 Bacteria 15421
107 Ga0373955_0637031 3300035172 Bacteria 653
108 Ga0373924_0006844 3300035410 Bacteria 4096
109 Ga0373924_0088243 3300035410 Bacteria 1325
110 Ga0373927_0405427 3300035695 Bacteria 899
111 Ga0373933_0078784 3300035724 Bacteria 2016
112 Ga0373937_0040702 3300036401 Bacteria 4236
113 Ga0373925_0070054 3300037068 Bacteria 2650
114 Ga0395899_0118086 3300037312 Bacteria 1902
115 Ga0395900_0003853 3300037418 Bacteria 16018
116 Ga0436364_0313693 3300037853 Bacteria 1243
117 Ga0395901_0004992 3300038443 Bacteria 13394
118 Ga0436362_0346268 3300039453 Bacteria 2046
119 Ga0439437_000820 3300042000 Bacteria 3197
120 Ga0439448_0112063 3300042005 Bacteria 932
121 Ga0466967_0009980 3300045976 Bacteria 7089
122 Ga0466967_0249900 3300045976 Bacteria 1694
123 Ga0495592_0016498 3300046454 Bacteria 5604
124 Ga0495592_0029135 3300046454 Bacteria 4180
125 Ga0495629_0006768 3300046459 Bacteria 8471
126 Ga0495651_0456404 3300046462 Bacteria 825
127 Ga0495653_0000358 3300046463 Bacteria 36893
128 Ga0495582_0039408 3300046473 Bacteria 2601
129 Ga0495664_0046148 3300046477 Bacteria 2585
130 Ga0495608_0006178 3300046511 Bacteria 8504
131 Ga0495608_0067306 3300046511 Bacteria 2343
132 Ga0495628_0017466 3300046516 Bacteria 5973
133 Ga0495628_0042395 3300046516 Bacteria 3630
134 Ga0495652_0060078 3300046529 Bacteria 3213
135 Ga0495665_0050856 3300046531 Bacteria 2196
136 Ga0495640_0061280 3300046533 Bacteria 2556
137 Ga0495587_0011825 3300046536 Bacteria 5517
138 Ga0495645_0152585 3300046543 Bacteria 1603
139 Ga0495667_0002771 3300046559 Bacteria 11698
140 Ga0495634_0002891 3300046642 Bacteria 14092
141 Ga0495635_0000466 3300046663 Bacteria 25585
142 Ga0495657_0006866 3300046675 Bacteria 8845
143 Ga0495599_0002741 3300046678 Bacteria 10274
144 Ga0495623_0001950 3300046679 Bacteria 13853
145 Ga0495623_0148175 3300046679 Bacteria 1390
146 Ga0495646_0007558 3300046680 Bacteria 6907
147 Ga0495646_0075274 3300046680 Bacteria 1980
148 Ga0495669_0062771 3300046684 Bacteria 1684
149 Ga0495613_0064604 3300046689 Bacteria 2676
150 Ga0495600_0001173 3300046809 Bacteria 14303
151 Ga0495581_0040955 3300047315 Bacteria 2680
152 Ga0495604_0005684 3300047317 Bacteria 9890
153 Ga0495674_0358593 3300047319 Bacteria 1182
154 Ga0495680_0006795 3300047322 Bacteria 10567
155 Ga0495675_0013217 3300047444 Bacteria 5210
156 Ga0495684_0000357 3300047471 Bacteria 36963
157 Ga0495593_0005202 3300047673 Bacteria 7689
158 Ga0496103_0151040 3300048906 Bacteria 1488
159 Ga0496107_0293983 3300048910 Bacteria 1209
160 Ga0496110_0357840 3300048913 Bacteria 1330
161 Ga0496112_0037747 3300048915 Bacteria 4716
162 Ga0496118_0001630 3300048921 Bacteria 33114
163 Ga0496119_0112459 3300048922 Bacteria 1509
164 Ga0496121_0065899 3300048924 Bacteria 2944
165 Ga0496125_0001507 3300048928 Bacteria 33343
166 Ga0496126_0031885 3300048929 Bacteria 4972
167 Ga0501290_017794 3300049513 Bacteria 954
168 Ga0501031_0506678 3300049568 Bacteria 778
169 Ga0501032_0007461 3300049569 Bacteria 7987
170 Ga0501032_0300470 3300049569 Bacteria 1038
171 Ga0501033_0007287 3300049570 Bacteria 8628
172 Ga0501033_0192773 3300049570 Bacteria 1458
173 Ga0501033_0496482 3300049570 Bacteria 844
174 Ga0501034_0002023 3300049571 Bacteria 25520
175 Ga0501034_0422181 3300049571 Bacteria 1254
176 Ga0501036_0081310 3300049572 Bacteria 2738
177 Ga0501036_0656043 3300049572 Bacteria 868
178 Ga0501037_0000271 3300049573 Bacteria 44641
179 Ga0501037_0056347 3300049573 Bacteria 2871
180 Ga0501037_0391236 3300049573 Bacteria 954
181 Ga0501043_0000096 3300049579 Bacteria 79864
182 Ga0501043_0236087 3300049579 Bacteria 1411
183 Ga0501046_0536794 3300049580 Bacteria 835
184 Ga0501047_0036965 3300049581 Bacteria 4720
185 Ga0501047_0094872 3300049581 Bacteria 2862
186 Ga0501047_0144863 3300049581 Bacteria 2253
187 Ga0501068_0343591 3300049584 Bacteria 959
188 Ga0501069_0000012 3300049585 Bacteria 148453
189 Ga0501070_0000329 3300049586 Bacteria 43062
190 Ga0501070_0000655 3300049586 Bacteria 31899
191 Ga0501070_0322772 3300049586 Bacteria 1255
192 Ga0501071_0005903 3300049587 Bacteria 7920
193 Ga0501072_0171934 3300049588 Bacteria 1729
194 Ga0501073_0029480 3300049589 Bacteria 3921
195 Ga0501073_0290552 3300049589 Bacteria 1128
196 Ga0501074_0000018 3300049590 Bacteria 76326
197 Ga0501074_0618885 3300049590 Bacteria 765
198 Ga0501075_0235361 3300049591 Bacteria 1396
199 Ga0501076_0134472 3300049592 Bacteria 2007
200 Ga0501076_0225081 3300049592 Bacteria 1533
201 Ga0501077_0079170 3300049593 Bacteria 2082
202 Ga0501077_0110868 3300049593 Bacteria 1739
203 Ga0501249_022106 3300049679 Bacteria 1391
204 Ga0501079_0279486 3300049741 Bacteria 1305
205 Ga0501080_0000558 3300049742 Bacteria 29460
206 Ga0501080_0004527 3300049742 Bacteria 12392
207 Ga0501080_0192263 3300049742 Bacteria 1875
208 Ga0501081_0217304 3300049743 Bacteria 1389
209 Ga0501083_0001735 3300049744 Bacteria 14857
210 Ga0501083_0050380 3300049744 Bacteria 2803
211 Ga0501083_0441337 3300049744 Bacteria 847
212 Ga0501035_0000039 3300049822 Bacteria 156824
213 Ga0501035_0001538 3300049822 Bacteria 23474
214 Ga0501035_0151885 3300049822 Bacteria 2009
215 Ga0501044_0000047 3300049823 Bacteria 146449
216 Ga0501044_0016976 3300049823 Bacteria 7809
217 Ga0501044_0027020 3300049823 Bacteria 6072
218 Ga0501044_0048147 3300049823 Bacteria 4405
219 Ga0501044_0104104 3300049823 Bacteria 2852
220 Ga0501044_0123951 3300049823 Bacteria 2582
221 Ga0501044_0212384 3300049823 Bacteria 1889
222 nmdc:mga03683_113395_c1 3300050489 Bacteria 1200
223 nmdc:mga06z11_78146_c1 3300050494 Bacteria 1768
224 nmdc:mga09592_134432_c1 3300050508 Bacteria 2130
225 nmdc:mga06r32_18149_c1 3300050510 Bacteria 6437
226 nmdc:mga06r32_28084_c1 3300050510 Bacteria 5262
227 Ga0495601_0064999 3300053077 Bacteria 2321
228 Ga0495595_0001882 3300053084 Bacteria 8147
229 Ga0495619_0000176 3300053085 Bacteria 47128
230 Ga0500644_0087053 3300053088 Bacteria 1161
231 Ga0500644_0201573 3300053088 Bacteria 823
232 Ga0500651_0002849 3300053093 Bacteria 9291
233 Ga0500566_0101796 3300053094 Bacteria 1574
234 Ga0500641_0050348 3300053096 Bacteria 1711
235 Ga0500555_010009 3300053103 Bacteria 2716
236 Ga0500562_001139 3300053108 Bacteria 6538
237 Ga0500595_029360 3300053119 Bacteria 1866
238 Ga0500608_034142 3300053122 Bacteria 2423
239 Ga0500568_0011286 3300053139 Bacteria 4157
240 Ga0500588_0109170 3300053146 Bacteria 963
241 Ga0500616_0002289 3300053153 Bacteria 16215
242 Ga0500616_0020106 3300053153 Bacteria 3754
243 Ga0500622_0004205 3300053156 Bacteria 9173
244 Ga0500627_0000024 3300053158 Bacteria 104034
245 Ga0500637_0036125 3300053178 Bacteria 2773
246 Ga0500611_004504 3300053727 Bacteria 1885
247 Ga0500661_002178 3300055283 Bacteria 3697
248 Ga0501082_0150213 3300060353 Bacteria 2023

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031616 Ga0307508_10534940 Ga0307508_105349401 206
2 3300035172 Ga0373955_0637031 Ga0373955_0637031_20_640 206
3 3300035410 Ga0373924_0088243 Ga0373924_0088243_39_659 206
4 3300049591 Ga0501075_0235361 Ga0501075_0235361_724_1353 209
5 3300049569 Ga0501032_0300470 Ga0501032_0300470_94_744 216
6 3300049572 Ga0501036_0081310 Ga0501036_0081310_2039_2698 219
7 3300049573 Ga0501037_0391236 Ga0501037_0391236_250_909 219
8 3300049592 Ga0501076_0134472 Ga0501076_0134472_769_1428 219
9 3300049593 Ga0501077_0110868 Ga0501077_0110868_255_914 219
10 3300045976 Ga0466967_0009980 Ga0466967_0009980_2193_2930 221
11 3300014968 Ga0157379_10210206 Ga0157379_102102062 222
12 3300035113 Ga0373936_0079734 Ga0373936_0079734_53_727 223
13 3300053108 Ga0500562_001139 Ga0500562_001139_1543_2226 224
14 3300009177 Ga0105248_10472307 Ga0105248_104723072 225
15 3300025981 Ga0207640_10122977 Ga0207640_101229772 225
16 3300006847 Ga0075431_100162476 Ga0075431_1001624762 226
17 3300006880 Ga0075429_100030297 Ga0075429_1000302973 226
18 3300009094 Ga0111539_10157166 Ga0111539_101571662 226
19 3300032002 Ga0307416_100110431 Ga0307416_1001104312 226
20 3300049589 Ga0501073_0290552 Ga0501073_0290552_25_708 226
21 iso_pu_bacteria 2791354901 2791915933 226
22 3300045976 Ga0466967_0249900 Ga0466967_0249900_66_803 227
23 3300031548 Ga0307408_100157785 Ga0307408_1001577852 231
24 3300032002 Ga0307416_100068585 Ga0307416_1000685853 231
25 3300049513 Ga0501290_017794 Ga0501290_017794_34_729 231
26 3300049679 Ga0501249_022106 Ga0501249_022106_175_870 231
27 3300049571 Ga0501034_0422181 Ga0501034_0422181_391_1095 233
28 3300005329 Ga0070683_100106089 Ga0070683_1001060892 234
29 3300005530 Ga0070679_100926337 Ga0070679_1009263371 234
30 3300005563 Ga0068855_100306634 Ga0068855_1003066342 234
31 3300005563 Ga0068855_100971704 Ga0068855_1009717041 234
32 3300005564 Ga0070664_100205150 Ga0070664_1002051502 234
33 3300005614 Ga0068856_100984803 Ga0068856_1009848031 234
34 3300013105 Ga0157369_10044781 Ga0157369_100447812 234
35 3300013307 Ga0157372_10131059 Ga0157372_101310592 234
36 3300025944 Ga0207661_10325206 Ga0207661_103252062 234
37 3300026078 Ga0207702_10181301 Ga0207702_101813012 234
38 3300037312 Ga0395899_0118086 Ga0395899_0118086_751_1458 234
39 3300037418 Ga0395900_0003853 Ga0395900_0003853_12335_13042 234
40 3300038443 Ga0395901_0004992 Ga0395901_0004992_629_1336 234
41 3300042005 Ga0439448_0112063 Ga0439448_0112063_89_796 234
42 3300049571 Ga0501034_0002023 Ga0501034_0002023_7086_7805 234
43 3300049570 Ga0501033_0496482 Ga0501033_0496482_97_810 236
44 3300049584 Ga0501068_0343591 Ga0501068_0343591_165_878 236
45 3300049586 Ga0501070_0000329 Ga0501070_0000329_8193_8906 236
46 3300049590 Ga0501074_0618885 Ga0501074_0618885_16_729 236
47 3300049742 Ga0501080_0004527 Ga0501080_0004527_7774_8487 236
48 3300049822 Ga0501035_0001538 Ga0501035_0001538_21936_22649 236
49 3300049823 Ga0501044_0027020 Ga0501044_0027020_1094_1807 236
50 3300053088 Ga0500644_0087053 Ga0500644_0087053_30_761 237
51 3300053153 Ga0500616_0002289 Ga0500616_0002289_12080_12841 237
52 3300031548 Ga0307408_100501698 Ga0307408_1005016981 238
53 3300031731 Ga0307405_10103031 Ga0307405_101030312 238
54 3300031901 Ga0307406_10676022 Ga0307406_106760222 238
55 3300031903 Ga0307407_10445663 Ga0307407_104456631 238
56 3300032002 Ga0307416_100199083 Ga0307416_1001990832 238
57 3300032126 Ga0307415_100048985 Ga0307415_1000489852 238
58 3300053088 Ga0500644_0201573 Ga0500644_0201573_11_733 239
59 3300053158 Ga0500627_0000024 Ga0500627_0000024_13456_14190 241
60 3300049568 Ga0501031_0506678 Ga0501031_0506678_27_758 242
61 3300049570 Ga0501033_0192773 Ga0501033_0192773_547_1278 242
62 3300049572 Ga0501036_0656043 Ga0501036_0656043_49_780 242
63 3300049580 Ga0501046_0536794 Ga0501046_0536794_18_752 242
64 3300049581 Ga0501047_0144863 Ga0501047_0144863_563_1294 242
65 3300049586 Ga0501070_0322772 Ga0501070_0322772_22_753 242
66 3300049822 Ga0501035_0151885 Ga0501035_0151885_858_1589 242
67 3300049823 Ga0501044_0048147 Ga0501044_0048147_1762_2493 242
68 3300049823 Ga0501044_0104104 Ga0501044_0104104_1529_2260 242
69 3300049823 Ga0501044_0123951 Ga0501044_0123951_815_1546 242
70 3300053727 Ga0500611_004504 Ga0500611_004504_636_1541 242
71 3300005937 Ga0081455_10001796 Ga0081455_1000179624 244
72 3300049744 Ga0501083_0441337 Ga0501083_0441337_91_828 244
73 3300005336 Ga0070680_100199928 Ga0070680_1001999281 245
74 3300005439 Ga0070711_100261879 Ga0070711_1002618792 245
75 3300005539 Ga0068853_100439856 Ga0068853_1004398562 245
76 3300005563 Ga0068855_100126891 Ga0068855_1001268912 245
77 3300005563 Ga0068855_100138206 Ga0068855_1001382062 245
78 3300005616 Ga0068852_100743893 Ga0068852_1007438931 245
79 3300006178 Ga0075367_10126579 Ga0075367_101265792 245
80 3300006847 Ga0075431_100004192 Ga0075431_1000041924 245
81 3300006880 Ga0075429_100103909 Ga0075429_1001039093 245
82 3300009094 Ga0111539_10124570 Ga0111539_101245703 245
83 3300013306 Ga0163162_10312638 Ga0163162_103126382 245
84 3300025908 Ga0207643_10015153 Ga0207643_100151531 245
85 3300025931 Ga0207644_10169770 Ga0207644_101697702 245
86 3300026041 Ga0207639_10355842 Ga0207639_103558422 245
87 3300026142 Ga0207698_10786239 Ga0207698_107862391 245
88 3300035111 Ga0373923_0000671 Ga0373923_0000671_4349_5086 245
89 3300035113 Ga0373936_0030609 Ga0373936_0030609_1336_2073 245
90 3300035117 Ga0373953_0002058 Ga0373953_0002058_894_1631 245
91 3300035118 Ga0373954_0000658 Ga0373954_0000658_6877_7614 245
92 3300035119 Ga0373956_0002940 Ga0373956_0002940_5723_6460 245
93 3300035120 Ga0373957_0005238 Ga0373957_0005238_941_1678 245
94 3300035172 Ga0373955_0000593 Ga0373955_0000593_3014_3751 245
95 3300035410 Ga0373924_0006844 Ga0373924_0006844_1322_2059 245
96 3300035695 Ga0373927_0405427 Ga0373927_0405427_101_838 245
97 3300035724 Ga0373933_0078784 Ga0373933_0078784_474_1211 245
98 3300036401 Ga0373937_0040702 Ga0373937_0040702_1845_2582 245
99 3300037068 Ga0373925_0070054 Ga0373925_0070054_207_944 245
100 3300046454 Ga0495592_0016498 Ga0495592_0016498_4825_5562 245
101 3300046459 Ga0495629_0006768 Ga0495629_0006768_3982_4719 245
102 3300046463 Ga0495653_0000358 Ga0495653_0000358_7068_7805 245
103 3300046511 Ga0495608_0006178 Ga0495608_0006178_3754_4491 245
104 3300046516 Ga0495628_0017466 Ga0495628_0017466_452_1189 245
105 3300046529 Ga0495652_0060078 Ga0495652_0060078_2370_3107 245
106 3300046536 Ga0495587_0011825 Ga0495587_0011825_4367_5104 245
107 3300046543 Ga0495645_0152585 Ga0495645_0152585_835_1572 245
108 3300046559 Ga0495667_0002771 Ga0495667_0002771_7823_8560 245
109 3300046642 Ga0495634_0002891 Ga0495634_0002891_5786_6523 245
110 3300046663 Ga0495635_0000466 Ga0495635_0000466_19996_20733 245
111 3300046675 Ga0495657_0006866 Ga0495657_0006866_3626_4363 245
112 3300046678 Ga0495599_0002741 Ga0495599_0002741_5171_5908 245
113 3300046679 Ga0495623_0001950 Ga0495623_0001950_1633_2370 245
114 3300046680 Ga0495646_0007558 Ga0495646_0007558_1616_2353 245
115 3300046689 Ga0495613_0064604 Ga0495613_0064604_1861_2598 245
116 3300046809 Ga0495600_0001173 Ga0495600_0001173_8238_8975 245
117 3300047317 Ga0495604_0005684 Ga0495604_0005684_5724_6461 245
118 3300047322 Ga0495680_0006795 Ga0495680_0006795_5785_6522 245
119 3300047444 Ga0495675_0013217 Ga0495675_0013217_107_844 245
120 3300047471 Ga0495684_0000357 Ga0495684_0000357_20482_21219 245
121 3300047673 Ga0495593_0005202 Ga0495593_0005202_6627_7364 245
122 3300048928 Ga0496125_0001507 Ga0496125_0001507_1395_2132 245
123 3300049581 Ga0501047_0036965 Ga0501047_0036965_124_864 245
124 3300050494 nmdc:mga06z11_78146_c1 nmdc:mga06z11_78146_c1_542_1279 245
125 3300050508 nmdc:mga09592_134432_c1 nmdc:mga09592_134432_c1_453_1193 245
126 3300050510 nmdc:mga06r32_18149_c1 nmdc:mga06r32_18149_c1_1994_2734 245
127 3300053077 Ga0495601_0064999 Ga0495601_0064999_1487_2224 245
128 3300053084 Ga0495595_0001882 Ga0495595_0001882_2868_3605 245
129 3300053085 Ga0495619_0000176 Ga0495619_0000176_38097_38834 245
130 3300053178 Ga0500637_0036125 Ga0500637_0036125_385_1125 245
131 3300015261 Ga0182006_1078256 Ga0182006_10782561 246
132 3300015262 Ga0182007_10011323 Ga0182007_100113232 246
133 3300037853 Ga0436364_0313693 Ga0436364_0313693_175_915 246
134 3300049569 Ga0501032_0007461 Ga0501032_0007461_2855_3601 247
135 3300049570 Ga0501033_0007287 Ga0501033_0007287_2866_3612 247
136 3300049573 Ga0501037_0000271 Ga0501037_0000271_14207_14953 247
137 3300049579 Ga0501043_0000096 Ga0501043_0000096_30026_30772 247
138 3300049585 Ga0501069_0000012 Ga0501069_0000012_49093_49839 247
139 3300049586 Ga0501070_0000655 Ga0501070_0000655_21435_22181 247
140 3300049587 Ga0501071_0005903 Ga0501071_0005903_6456_7202 247
141 3300049589 Ga0501073_0029480 Ga0501073_0029480_1650_2396 247
142 3300049590 Ga0501074_0000018 Ga0501074_0000018_49094_49840 247
143 3300049742 Ga0501080_0000558 Ga0501080_0000558_26983_27729 247
144 3300049744 Ga0501083_0001735 Ga0501083_0001735_7080_7826 247
145 3300049744 Ga0501083_0050380 Ga0501083_0050380_1548_2294 247
146 3300049822 Ga0501035_0000039 Ga0501035_0000039_106902_107648 247
147 3300049823 Ga0501044_0000047 Ga0501044_0000047_49256_50002 247
148 3300005355 Ga0070671_100506433 Ga0070671_1005064331 248
149 3300025931 Ga0207644_10582788 Ga0207644_105827882 248
150 3300046477 Ga0495664_0046148 Ga0495664_0046148_297_1115 248
151 3300046511 Ga0495608_0067306 Ga0495608_0067306_1304_2122 248
152 3300046533 Ga0495640_0061280 Ga0495640_0061280_1596_2414 248
153 3300046680 Ga0495646_0075274 Ga0495646_0075274_237_1055 248
154 3300047315 Ga0495581_0040955 Ga0495581_0040955_1709_2527 248
155 3300049588 Ga0501072_0171934 Ga0501072_0171934_711_1457 248
156 3300049592 Ga0501076_0225081 Ga0501076_0225081_323_1069 248
157 3300049593 Ga0501077_0079170 Ga0501077_0079170_993_1739 248
158 3300049741 Ga0501079_0279486 Ga0501079_0279486_460_1206 248
159 3300049743 Ga0501081_0217304 Ga0501081_0217304_198_944 248
160 3300060353 Ga0501082_0150213 Ga0501082_0150213_853_1599 248
161 3300005458 Ga0070681_10239360 Ga0070681_102393602 249
162 3300025912 Ga0207707_10213141 Ga0207707_102131412 249
163 3300048922 Ga0496119_0112459 Ga0496119_0112459_126_875 249
164 3300053096 Ga0500641_0050348 Ga0500641_0050348_512_1264 249
165 3300053139 Ga0500568_0011286 Ga0500568_0011286_2193_2945 249
166 3300053153 Ga0500616_0020106 Ga0500616_0020106_1708_2460 249
167 3300025261 Ga0209233_1004005 Ga0209233_10040052 250
168 3300049823 Ga0501044_0212384 Ga0501044_0212384_774_1526 250
169 3300024225 Ga0224572_1001807 Ga0224572_10018072 252
170 3300049573 Ga0501037_0056347 Ga0501037_0056347_1620_2384 252
171 3300049579 Ga0501043_0236087 Ga0501043_0236087_552_1316 252
172 3300049581 Ga0501047_0094872 Ga0501047_0094872_979_1743 252
173 3300049742 Ga0501080_0192263 Ga0501080_0192263_330_1094 252
174 3300049823 Ga0501044_0016976 Ga0501044_0016976_172_933 252
175 3300053094 Ga0500566_0101796 Ga0500566_0101796_22_783 252
176 3300053122 Ga0500608_034142 Ga0500608_034142_1003_1764 252
177 3300053156 Ga0500622_0004205 Ga0500622_0004205_6440_7201 252
178 3300055283 Ga0500661_002178 Ga0500661_002178_936_1790 252
179 3300046462 Ga0495651_0456404 Ga0495651_0456404_49_813 253
180 3300025928 Ga0207700_10097431 Ga0207700_100974314 254
181 3300006178 Ga0075367_10140497 Ga0075367_101404972 256
182 3300028573 Ga0265334_10032273 Ga0265334_100322733 256
183 iso_pu_bacteria 2515154122 2515684576 258
184 3300006195 Ga0075366_10051112 Ga0075366_100511123 260
185 3300009147 Ga0114129_10011329 Ga0114129_1001132913 260
186 3300013296 Ga0157374_10247132 Ga0157374_102471322 260
187 3300050489 nmdc:mga03683_113395_c1 nmdc:mga03683_113395_c1_152_952 260
188 3300053093 Ga0500651_0002849 Ga0500651_0002849_3116_3901 260
189 3300005457 Ga0070662_100109678 Ga0070662_1001096783 261
190 3300050510 nmdc:mga06r32_28084_c1 nmdc:mga06r32_28084_c1_4147_4941 261
191 iso_pu_bacteria 8055909800 8055913578 261
192 3300005548 Ga0070665_100000630 Ga0070665_10000063047 262
193 3300005548 Ga0070665_100012745 Ga0070665_1000127456 262
194 3300005617 Ga0068859_100002737 Ga0068859_10000273721 262
195 3300005843 Ga0068860_100084799 Ga0068860_1000847992 262
196 3300006931 Ga0097620_100002737 Ga0097620_10000273721 262
197 3300013306 Ga0163162_10189766 Ga0163162_101897661 262
198 3300025913 Ga0207695_10325236 Ga0207695_103252362 262
199 3300028379 Ga0268266_10002515 Ga0268266_100025153 262
200 3300028379 Ga0268266_10011647 Ga0268266_100116478 262
201 3300028381 Ga0268264_10114985 Ga0268264_101149852 262
202 3300031238 Ga0265332_10019637 Ga0265332_100196371 262
203 3300031456 Ga0307513_10041797 Ga0307513_100417974 262
204 3300048906 Ga0496103_0151040 Ga0496103_0151040_672_1460 262
205 3300048910 Ga0496107_0293983 Ga0496107_0293983_404_1195 262
206 3300048913 Ga0496110_0357840 Ga0496110_0357840_362_1153 262
207 3300048915 Ga0496112_0037747 Ga0496112_0037747_2555_3346 262
208 3300048921 Ga0496118_0001630 Ga0496118_0001630_15364_16155 262
209 3300048924 Ga0496121_0065899 Ga0496121_0065899_1356_2147 262
210 3300048929 Ga0496126_0031885 Ga0496126_0031885_1036_1824 262
211 3300053103 Ga0500555_010009 Ga0500555_010009_531_1322 262
212 3300053119 Ga0500595_029360 Ga0500595_029360_891_1682 262
213 3300053146 Ga0500588_0109170 Ga0500588_0109170_138_929 262
214 3300002741 JGI25157J39369_1001003 JGI25157J39369_10010033 263
215 3300005344 Ga0070661_100014007 Ga0070661_1000140072 263
216 3300005345 Ga0070692_10002595 Ga0070692_100025956 263
217 3300005435 Ga0070714_100000107 Ga0070714_10000010741 263
218 3300005435 Ga0070714_100000125 Ga0070714_10000012524 263
219 3300005435 Ga0070714_100234316 Ga0070714_1002343162 263
220 3300005436 Ga0070713_100023602 Ga0070713_1000236022 263
221 3300005539 Ga0068853_100072824 Ga0068853_1000728242 263
222 3300005614 Ga0068856_100014447 Ga0068856_1000144472 263
223 3300009545 Ga0105237_10032918 Ga0105237_100329183 263
224 3300009551 Ga0105238_10065689 Ga0105238_100656893 263
225 3300010375 Ga0105239_10033249 Ga0105239_100332492 263
226 3300013105 Ga0157369_10095826 Ga0157369_100958262 263
227 3300025226 Ga0209674_104396 Ga0209674_1043963 263
228 3300025250 Ga0209026_1000093 Ga0209026_100009394 263
229 3300025256 Ga0209759_1025830 Ga0209759_10258301 263
230 3300025904 Ga0207647_10014287 Ga0207647_100142873 263
231 3300025914 Ga0207671_10038103 Ga0207671_100381032 263
232 3300025919 Ga0207657_10029059 Ga0207657_100290593 263
233 3300025920 Ga0207649_10002155 Ga0207649_100021554 263
234 3300025928 Ga0207700_10016769 Ga0207700_100167695 263
235 3300025929 Ga0207664_10000036 Ga0207664_1000003628 263
236 3300025929 Ga0207664_10001103 Ga0207664_100011038 263
237 3300025929 Ga0207664_10119193 Ga0207664_101191931 263
238 3300025933 Ga0207706_10007596 Ga0207706_100075965 263
239 3300025949 Ga0207667_10007681 Ga0207667_100076817 263
240 3300026041 Ga0207639_10231382 Ga0207639_102313821 263
241 3300026078 Ga0207702_10004911 Ga0207702_100049116 263
242 3300042000 Ga0439437_000820 Ga0439437_000820_68_862 263
243 iso_pu_bacteria 2939611941 2939614345 263
244 3300001979 JGI24740J21852_10000694 JGI24740J21852_1000069415 266
245 3300039453 Ga0436362_0346268 Ga0436362_0346268_787_1587 266
246 3300046454 Ga0495592_0029135 Ga0495592_0029135_1127_1945 266
247 3300046473 Ga0495582_0039408 Ga0495582_0039408_1026_1844 266
248 3300046516 Ga0495628_0042395 Ga0495628_0042395_1015_1833 266
249 3300046531 Ga0495665_0050856 Ga0495665_0050856_1282_2100 266
250 3300046679 Ga0495623_0148175 Ga0495623_0148175_456_1274 266
251 3300046684 Ga0495669_0062771 Ga0495669_0062771_544_1392 266
252 3300047319 Ga0495674_0358593 Ga0495674_0358593_103_921 266

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05988

DUF899

Bacterial protein of unknown function (DUF899)

34

253

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1lu4-assembly1.cif.gz_A 1.1 angstrom resolution crystal structure of a secreted mycobacterium tuberculosis disulfide oxidoreductase homologous to e. coli dsbe: implications for functions 0.7208 65 190
5um7-assembly2.cif.gz_B crystal structure of the reduced state of the thiol-disulfide reductase sdba from streptococcus gordonii 0.7103 56 189
2lrn-assembly1.cif.gz_A solution structure of a thiol:disulfide interchange protein from bacteroides sp. 0.709 57 176
3ios-assembly1.cif.gz_A structure of mtb dsbf in its mixed oxidized and reduced forms 0.7062 65 196
3raz-assembly1.cif.gz_A the crystal structure of thioredoxin-related protein from neisseria meningitidis serogroup b 0.6705 68 204
ID Description Score Start End Superfamily
3kcmB00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.715 63 193 3.40.30.10
2m72A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7099 64 196 3.40.30.10
3iosA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7062 65 196 3.40.30.10
af_Q54W09_3_152_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.6988 56 193 3.40.30.10
af_Q8IJD0_13_158_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.6967 67 195 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A434R899-F1-model_v4 DUF899 domain-containing protein 0.9591 15 200
AF-A0A1Z4EWE9-F1-model_v4 DUF899 domain-containing protein 0.9441 75 153
AF-A0A434R899-F1-model_v4 DUF899 domain-containing protein 0.9441 15 200
AF-A0A7V8Y142-F1-model_v4 DUF899 domain-containing protein 0.9401 18 209
AF-A0A1X2FAW9-F1-model_v4 DUF899 domain-containing protein 0.9363 18 237

Feature Viewer

pLDDT pTM Quality
79.65 0.74 High
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Predicted Structure (AlphaFold2)

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