F364033

General Info

Members Datasets Scaffolds Average Seq Length
253 187 500 336

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10176265|Ga0105248_101762652
Length 354
Sequence VDEATPTEATLINSLGVVRRTILIGTVAMCAAALVACSAEKSGNAVELTNVSYDPTRELYQAINPAFAAAWKQKTGQDVTFRMSHGGSGKQSRAIIDGLDADVATLALAYDIDAIASKAKLLPTNWQQVLPNNSAPYTSTIVFLVRRGNPKSIHDWGDLIKPGVGVITPNPKTSGGARWNFLAAWAYGRKAGGSDAAAENYVRKLYAQVPVLDSGARGATTTFAEREIGDVLIGWENEALLARSKMGSGKFEVVVPPTSILAEPPVAVITANAKKHGTEALARAYLEFLYTPQAQVAIARNFYRPRDPQIAAKFKSQFPEVSLATIDKDFGGWAKAQHQFFDDGGVFDRIYVKK

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
6 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
7 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
90 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
98 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
106 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
107 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
114 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
115 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
116 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
121 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
122 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
123 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
126 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
127 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
133 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
148 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
149 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
150 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
151 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
159 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
160 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
161 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
162 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
163 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
164 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
165 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
166 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
167 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
168 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
169 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
170 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
171 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
172 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
173 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
179 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
180 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
181 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
182 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
183 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
184 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
185 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
186 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
187 3007315729 Pseudomonas argentinensis SA190 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.63
Metatranscriptomes 0.4
Isolates 1.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.74
Nodule 0.79
Rhizoplane 1.98
Rhizosphere 85.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10176265 3300009177 Bacteria 2409
2 JGI24746J21847_1000428 3300001977 Bacteria 6260
3 JGI24740J21852_10039240 3300001979 Bacteria 1446
4 JGI24739J22299_10004871 3300001989 Bacteria 5117
5 JGI24744J21845_10005094 3300002077 Bacteria 2719
6 JGI24751J29686_10000323 3300002459 Bacteria 17632
7 JGI25405J52794_10003144 3300003911 Bacteria 2874
8 Ga0065714_10142054 3300005288 Bacteria 1164
9 Ga0065704_10072476 3300005289 Bacteria 8451
10 Ga0065704_10124872 3300005289 Bacteria 1711
11 Ga0065707_10083041 3300005295 Bacteria 10711
12 Ga0070658_10002973 3300005327 Bacteria 14041
13 Ga0070690_100058830 3300005330 Bacteria 2469
14 Ga0070670_100000209 3300005331 Bacteria 54253
15 Ga0070670_100025420 3300005331 Bacteria 5095
16 Ga0070666_10005638 3300005335 Bacteria 7679
17 Ga0070666_10058938 3300005335 Bacteria 2597
18 Ga0070660_100120644 3300005339 Bacteria 2092
19 Ga0070689_100001555 3300005340 Bacteria 14622
20 Ga0070689_100144847 3300005340 Bacteria 1913
21 Ga0070669_100002168 3300005353 Bacteria 14196
22 Ga0070671_100000590 3300005355 Bacteria 25915
23 Ga0070667_100005681 3300005367 Bacteria 10420
24 Ga0070710_10216240 3300005437 Bacteria 1217
25 Ga0070711_100113634 3300005439 Bacteria 1991
26 Ga0070694_100078365 3300005444 Bacteria 2292
27 Ga0068867_100000025 3300005459 Bacteria 92038
28 Ga0070679_100163141 3300005530 Bacteria 2202
29 Ga0070686_100004941 3300005544 Bacteria 7353
30 Ga0068855_100000667 3300005563 Bacteria 41874
31 Ga0070664_100000393 3300005564 Bacteria 32619
32 Ga0068857_100009328 3300005577 Bacteria 8520
33 Ga0068854_100149365 3300005578 Bacteria 1800
34 Ga0070702_100001694 3300005615 Bacteria 9148
35 Ga0068859_100016353 3300005617 Bacteria 7453
36 Ga0068859_100133682 3300005617 Bacteria 2552
37 Ga0068864_100000062 3300005618 Bacteria 121206
38 Ga0068864_100373024 3300005618 Bacteria 1351
39 Ga0068861_100001227 3300005719 Bacteria 15967
40 Ga0068863_100000064 3300005841 Bacteria 118153
41 Ga0068858_100087685 3300005842 Bacteria 2894
42 Ga0068860_100050161 3300005843 Bacteria 3973
43 Ga0068860_100252309 3300005843 Bacteria 1718
44 Ga0068862_100000079 3300005844 Bacteria 113551
45 Ga0068862_100064455 3300005844 Bacteria 3154
46 Ga0081455_10000097 3300005937 Bacteria 96027
47 Ga0075364_10168906 3300006051 Bacteria 1478
48 Ga0070715_10105874 3300006163 Bacteria 1319
49 Ga0075367_10084457 3300006178 Bacteria 1925
50 Ga0097621_100008237 3300006237 Bacteria 7497
51 Ga0075370_10000827 3300006353 Bacteria 12480
52 Ga0075428_100000007 3300006844 Bacteria 273226
53 Ga0075431_100060841 3300006847 Bacteria 3897
54 Ga0097620_100016352 3300006931 Bacteria 7453
55 Ga0097620_100133682 3300006931 Bacteria 2552
56 Ga0079104_1014749 3300006946 Bacteria 2346
57 Ga0105251_10001808 3300009011 Bacteria 17740
58 Ga0111539_10000009 3300009094 Bacteria 375223
59 Ga0105243_10000065 3300009148 Bacteria 124947
60 Ga0105243_10092074 3300009148 Bacteria 2498
61 Ga0105248_10000014 3300009177 Bacteria 324729
62 Ga0105248_10012891 3300009177 Bacteria 9218
63 Ga0105237_10004261 3300009545 Bacteria 16634
64 Ga0105238_10189689 3300009551 Bacteria 2032
65 Ga0105249_10011864 3300009553 Bacteria 7661
66 Ga0157373_10000618 3300013100 Bacteria 27838
67 Ga0157373_10132614 3300013100 Bacteria 1752
68 Ga0157371_10164985 3300013102 Bacteria 1582
69 Ga0157370_10004080 3300013104 Bacteria 16932
70 Ga0163162_10032711 3300013306 Bacteria 5166
71 Ga0163162_10050180 3300013306 Bacteria 4185
72 Ga0163162_10408605 3300013306 Bacteria 1490
73 Ga0157380_10000285 3300014326 Bacteria 30384
74 Ga0209050_1000432 3300025298 Bacteria 76758
75 Ga0207697_10086501 3300025315 Bacteria 1325
76 Ga0207713_1003549 3300025735 Bacteria 10559
77 Ga0207680_10002109 3300025903 Bacteria 9306
78 Ga0207647_10026055 3300025904 Bacteria 3829
79 Ga0207705_10006735 3300025909 Bacteria 8494
80 Ga0207660_10128790 3300025917 Bacteria 1925
81 Ga0207657_10035510 3300025919 Bacteria 4469
82 Ga0207652_10184251 3300025921 Bacteria 1877
83 Ga0207681_10001139 3300025923 Bacteria 17152
84 Ga0207694_10083500 3300025924 Bacteria 2512
85 Ga0207694_10237215 3300025924 Bacteria 1490
86 Ga0207650_10001245 3300025925 Bacteria 18514
87 Ga0207644_10000426 3300025931 Bacteria 27342
88 Ga0207690_10000922 3300025932 Bacteria 18771
89 Ga0207706_10017003 3300025933 Bacteria 6561
90 Ga0207706_10098283 3300025933 Bacteria 2575
91 Ga0207709_10000099 3300025935 Bacteria 135428
92 Ga0207670_10007688 3300025936 Bacteria 6039
93 Ga0207711_10000021 3300025941 Bacteria 355952
94 Ga0207711_10010295 3300025941 Bacteria 7766
95 Ga0207679_10001251 3300025945 Bacteria 16133
96 Ga0207667_10003599 3300025949 Bacteria 19130
97 Ga0207712_10001408 3300025961 Bacteria 16393
98 Ga0207640_10229819 3300025981 Bacteria 1426
99 Ga0207658_10003502 3300025986 Bacteria 11076
100 Ga0207658_10175773 3300025986 Bacteria 1768
101 Ga0207639_10058943 3300026041 Bacteria 2955
102 Ga0207678_10108028 3300026067 Bacteria 2373
103 Ga0207641_10000107 3300026088 Bacteria 121220
104 Ga0207648_10000134 3300026089 Bacteria 73554
105 Ga0207676_10000057 3300026095 Bacteria 121220
106 Ga0207674_10392316 3300026116 Bacteria 1342
107 Ga0207674_10500022 3300026116 Bacteria 1174
108 Ga0207675_100004168 3300026118 Bacteria 13995
109 Ga0209281_1012278 3300027111 Bacteria 1887
110 Ga0209371_1000066 3300027312 Bacteria 212660
111 Ga0207428_10000022 3300027907 Bacteria 273333
112 Ga0268265_10000080 3300028380 Bacteria 121220
113 Ga0268264_10552666 3300028381 Bacteria 1129
114 Ga0268256_1000063 3300030500 Bacteria 212660
115 Ga0307513_10060588 3300031456 Bacteria 4012
116 Ga0307408_100001132 3300031548 Bacteria 20269
117 Ga0307408_100035551 3300031548 Bacteria 3497
118 Ga0307408_100202114 3300031548 Bacteria 1609
119 Ga0307408_100208560 3300031548 Bacteria 1586
120 Ga0307405_10027127 3300031731 Bacteria 3316
121 Ga0307405_10073898 3300031731 Bacteria 2203
122 Ga0307405_10080182 3300031731 Bacteria 2130
123 Ga0307405_10120686 3300031731 Bacteria 1793
124 Ga0307413_10015486 3300031824 Bacteria 3909
125 Ga0307413_10017553 3300031824 Bacteria 3730
126 Ga0307413_10297845 3300031824 Bacteria 1222
127 Ga0307406_10032838 3300031901 Bacteria 3171
128 Ga0307406_10069988 3300031901 Bacteria 2296
129 Ga0307406_10107799 3300031901 Bacteria 1911
130 Ga0307407_10227631 3300031903 Bacteria 1264
131 Ga0307412_10004411 3300031911 Bacteria 7844
132 Ga0307412_10021604 3300031911 Bacteria 3935
133 Ga0307412_10034217 3300031911 Bacteria 3237
134 Ga0307409_100012222 3300031995 Bacteria 5460
135 Ga0307409_100029442 3300031995 Bacteria 3930
136 Ga0307416_100071295 3300032002 Bacteria 2886
137 Ga0307416_100107724 3300032002 Bacteria 2446
138 Ga0307416_100161936 3300032002 Bacteria 2069
139 Ga0307414_10000018 3300032004 Bacteria 237060
140 Ga0307414_10000638 3300032004 Bacteria 17960
141 Ga0307414_10039961 3300032004 Bacteria 3165
142 Ga0307414_10099805 3300032004 Bacteria 2182
143 Ga0307415_100055827 3300032126 Bacteria 2704
144 Ga0307415_100172175 3300032126 Bacteria 1689
145 Ga0373955_0021286 3300035172 Bacteria 3272
146 Ga0373933_0008540 3300035724 Bacteria 5586
147 Ga0373937_0012306 3300036401 Bacteria 7522
148 Ga0395900_0128207 3300037418 Bacteria 2601
149 Ga0395905_0002035 3300037471 Bacteria 23108
150 Ga0395905_0003116 3300037471 Bacteria 17889
151 Ga0395905_0050093 3300037471 Bacteria 3914
152 Ga0395905_0056561 3300037471 Bacteria 3669
153 Ga0395905_0067305 3300037471 Bacteria 3355
154 Ga0395901_0019263 3300038443 Bacteria 6977
155 Ga0395901_0078759 3300038443 Bacteria 3441
156 Ga0395901_0079008 3300038443 Bacteria 3435
157 Ga0395901_0136735 3300038443 Bacteria 2575
158 Ga0395901_0280678 3300038443 Bacteria 1730
159 Ga0395901_0454088 3300038443 Bacteria 1310
160 Ga0436363_1285457 3300039450 Bacteria 9043
161 Ga0439465_0004811 3300041413 Bacteria 4340
162 Ga0439445_0003999 3300042004 Bacteria 3327
163 Ga0439452_008283 3300042010 Bacteria 3140
164 Ga0439464_0000889 3300042439 Bacteria 6667
165 Ga0451577_0008808 3300042876 Bacteria 9773
166 Ga0451576_0042648 3300045051 Bacteria 4790
167 Ga0495651_0208235 3300046462 Bacteria 1363
168 Ga0495596_0000135 3300046500 Bacteria 50784
169 Ga0495607_0065900 3300046501 Bacteria 2040
170 Ga0495616_0001211 3300046513 Bacteria 18181
171 Ga0495632_0011036 3300046519 Bacteria 5294
172 Ga0495643_0013608 3300046522 Bacteria 4863
173 Ga0495663_0005858 3300046525 Bacteria 3404
174 Ga0495654_0000937 3300046530 Bacteria 21616
175 Ga0495609_0001629 3300046538 Bacteria 14639
176 Ga0495668_0001796 3300046616 Bacteria 19561
177 Ga0495668_0014034 3300046616 Bacteria 4709
178 Ga0495668_0048879 3300046616 Bacteria 2346
179 Ga0495625_0014297 3300046660 Bacteria 6342
180 Ga0495625_0062636 3300046660 Bacteria 2628
181 Ga0495625_0234845 3300046660 Bacteria 1196
182 Ga0495686_0000100 3300047472 Bacteria 180492
183 Ga0495602_0037118 3300048088 Bacteria 4526
184 Ga0495615_0000029 3300048090 Bacteria 47153
185 Ga0495626_0002540 3300048091 Bacteria 12538
186 Ga0496101_0181510 3300048904 Bacteria 1621
187 Ga0496105_0007137 3300048908 Bacteria 8617
188 Ga0496109_0463566 3300048912 Bacteria 1197
189 Ga0496110_0042354 3300048913 Bacteria 3974
190 Ga0496112_0070018 3300048915 Bacteria 3466
191 Ga0496117_0003055 3300048920 Bacteria 20058
192 Ga0496118_0001099 3300048921 Bacteria 42066
193 Ga0496118_0055583 3300048921 Bacteria 2985
194 Ga0496119_0050675 3300048922 Bacteria 2557
195 Ga0496121_0014090 3300048924 Bacteria 8524
196 Ga0496121_0020283 3300048924 Bacteria 6590
197 Ga0496122_0000745 3300048925 Bacteria 63497
198 Ga0496122_0000811 3300048925 Bacteria 59974
199 Ga0496123_0000364 3300048926 Bacteria 85356
200 Ga0496123_0002386 3300048926 Bacteria 23531
201 Ga0496124_0002834 3300048927 Bacteria 21942
202 Ga0496125_0007632 3300048928 Bacteria 11473
203 Ga0501290_000378 3300049513 Bacteria 7071
204 Ga0501292_000004 3300049515 Bacteria 159565
205 Ga0501297_000559 3300049520 Bacteria 3371
206 Ga0501300_001436 3300049523 Bacteria 3572
207 Ga0501314_002805 3300049530 Bacteria 1370
208 Ga0501034_0006938 3300049571 Bacteria 12106
209 Ga0501039_0086892 3300049575 Bacteria 2436
210 Ga0501042_0134187 3300049578 Bacteria 1785
211 Ga0501043_0063191 3300049579 Bacteria 2907
212 Ga0501046_0002983 3300049580 Bacteria 15641
213 Ga0501047_0028975 3300049581 Bacteria 5340
214 Ga0501217_020142 3300049661 Bacteria 1564
215 Ga0501223_000018 3300049663 Bacteria 67853
216 Ga0501223_013768 3300049663 Bacteria 1608
217 Ga0501224_000002 3300049664 Bacteria 229331
218 Ga0501224_000421 3300049664 Bacteria 5057
219 Ga0501227_003256 3300049665 Bacteria 3522
220 Ga0501233_000006 3300049668 Bacteria 39891
221 Ga0501233_002404 3300049668 Bacteria 3294
222 Ga0501235_000017 3300049669 Bacteria 31124
223 Ga0501235_004557 3300049669 Bacteria 2993
224 Ga0501257_000138 3300049686 Bacteria 16649
225 Ga0501259_000200 3300049688 Bacteria 9181
226 Ga0501261_000035 3300049690 Bacteria 27543
227 Ga0501225_0000049 3300049705 Bacteria 40546
228 Ga0501225_0004418 3300049705 Bacteria 4187
229 Ga0501229_004044 3300049706 Bacteria 1774
230 Ga0501245_000486 3300049708 Bacteria 4824
231 Ga0501279_000048 3300049775 Bacteria 23447
232 Ga0501280_000023 3300049776 Bacteria 50265
233 Ga0501281_00441 3300049777 Bacteria 4037
234 Ga0501282_000019 3300049778 Bacteria 23818
235 Ga0501044_0019940 3300049823 Bacteria 7162
236 Ga0501226_000026 3300049853 Bacteria 91031
237 nmdc:mga07m45_27091_c2 3300050496 Bacteria 2438
238 nmdc:mga07m45_348_c1 3300050496 Bacteria 18873
239 nmdc:mga08y16_21_c1 3300050511 Bacteria 254790
240 Ga0500643_000326 3300053087 Bacteria 38307
241 Ga0500643_000577 3300053087 Bacteria 25463
242 Ga0500592_004652 3300053116 Bacteria 2182
243 Ga0500604_0003081 3300053151 Bacteria 4476
244 Ga0500627_0000103 3300053158 Bacteria 28283
245 Ga0500611_000251 3300053727 Bacteria 6020
246 2511130998 2510917021 Bacteria 5705459
247 2819551505 2818991438 Bacteria 5793701
248 2846035893 2846033681 Bacteria 4377894
249 2846042302 2846037992 Bacteria 4526407
250 3007316477 3007315729 Bacteria 5076637
251 Ga0105248_10176265
252 JGI24746J21847_1000428
253 JGI24740J21852_10039240
254 JGI24739J22299_10004871
255 JGI24744J21845_10005094
256 JGI24751J29686_10000323
257 JGI25405J52794_10003144
258 Ga0065714_10142054
259 Ga0065704_10072476
260 Ga0065704_10124872
261 Ga0065707_10083041
262 Ga0070658_10002973
263 Ga0070690_100058830
264 Ga0070670_100000209
265 Ga0070670_100025420
266 Ga0070666_10005638
267 Ga0070666_10058938
268 Ga0070660_100120644
269 Ga0070689_100001555
270 Ga0070689_100144847
271 Ga0070669_100002168
272 Ga0070671_100000590
273 Ga0070667_100005681
274 Ga0070710_10216240
275 Ga0070711_100113634
276 Ga0070694_100078365
277 Ga0068867_100000025
278 Ga0070679_100163141
279 Ga0070686_100004941
280 Ga0068855_100000667
281 Ga0070664_100000393
282 Ga0068857_100009328
283 Ga0068854_100149365
284 Ga0070702_100001694
285 Ga0068859_100016353
286 Ga0068859_100133682
287 Ga0068864_100000062
288 Ga0068864_100373024
289 Ga0068861_100001227
290 Ga0068863_100000064
291 Ga0068858_100087685
292 Ga0068860_100050161
293 Ga0068860_100252309
294 Ga0068862_100000079
295 Ga0068862_100064455
296 Ga0081455_10000097
297 Ga0075364_10168906
298 Ga0070715_10105874
299 Ga0075367_10084457
300 Ga0097621_100008237
301 Ga0075370_10000827
302 Ga0075428_100000007
303 Ga0075431_100060841
304 Ga0097620_100016352
305 Ga0097620_100133682
306 Ga0079104_1014749
307 Ga0105251_10001808
308 Ga0111539_10000009
309 Ga0105243_10000065
310 Ga0105243_10092074
311 Ga0105248_10000014
312 Ga0105248_10012891
313 Ga0105237_10004261
314 Ga0105238_10189689
315 Ga0105249_10011864
316 Ga0157373_10000618
317 Ga0157373_10132614
318 Ga0157371_10164985
319 Ga0157370_10004080
320 Ga0163162_10032711
321 Ga0163162_10050180
322 Ga0163162_10408605
323 Ga0157380_10000285
324 Ga0209050_1000432
325 Ga0207697_10086501
326 Ga0207713_1003549
327 Ga0207680_10002109
328 Ga0207647_10026055
329 Ga0207705_10006735
330 Ga0207660_10128790
331 Ga0207657_10035510
332 Ga0207652_10184251
333 Ga0207681_10001139
334 Ga0207694_10083500
335 Ga0207694_10237215
336 Ga0207650_10001245
337 Ga0207644_10000426
338 Ga0207690_10000922
339 Ga0207706_10017003
340 Ga0207706_10098283
341 Ga0207709_10000099
342 Ga0207670_10007688
343 Ga0207711_10000021
344 Ga0207711_10010295
345 Ga0207679_10001251
346 Ga0207667_10003599
347 Ga0207712_10001408
348 Ga0207640_10229819
349 Ga0207658_10003502
350 Ga0207658_10175773
351 Ga0207639_10058943
352 Ga0207678_10108028
353 Ga0207641_10000107
354 Ga0207648_10000134
355 Ga0207676_10000057
356 Ga0207674_10392316
357 Ga0207674_10500022
358 Ga0207675_100004168
359 Ga0209281_1012278
360 Ga0209371_1000066
361 Ga0207428_10000022
362 Ga0268265_10000080
363 Ga0268264_10552666
364 Ga0268256_1000063
365 Ga0307513_10060588
366 Ga0307408_100001132
367 Ga0307408_100035551
368 Ga0307408_100202114
369 Ga0307408_100208560
370 Ga0307405_10027127
371 Ga0307405_10073898
372 Ga0307405_10080182
373 Ga0307405_10120686
374 Ga0307413_10015486
375 Ga0307413_10017553
376 Ga0307413_10297845
377 Ga0307406_10032838
378 Ga0307406_10069988
379 Ga0307406_10107799
380 Ga0307407_10227631
381 Ga0307412_10004411
382 Ga0307412_10021604
383 Ga0307412_10034217
384 Ga0307409_100012222
385 Ga0307409_100029442
386 Ga0307416_100071295
387 Ga0307416_100107724
388 Ga0307416_100161936
389 Ga0307414_10000018
390 Ga0307414_10000638
391 Ga0307414_10039961
392 Ga0307414_10099805
393 Ga0307415_100055827
394 Ga0307415_100172175
395 Ga0373955_0021286
396 Ga0373933_0008540
397 Ga0373937_0012306
398 Ga0395900_0128207
399 Ga0395905_0002035
400 Ga0395905_0003116
401 Ga0395905_0050093
402 Ga0395905_0056561
403 Ga0395905_0067305
404 Ga0395901_0019263
405 Ga0395901_0078759
406 Ga0395901_0079008
407 Ga0395901_0136735
408 Ga0395901_0280678
409 Ga0395901_0454088
410 Ga0436363_1285457
411 Ga0439465_0004811
412 Ga0439445_0003999
413 Ga0439452_008283
414 Ga0439464_0000889
415 Ga0451577_0008808
416 Ga0451576_0042648
417 Ga0495651_0208235
418 Ga0495596_0000135
419 Ga0495607_0065900
420 Ga0495616_0001211
421 Ga0495632_0011036
422 Ga0495643_0013608
423 Ga0495663_0005858
424 Ga0495654_0000937
425 Ga0495609_0001629
426 Ga0495668_0001796
427 Ga0495668_0014034
428 Ga0495668_0048879
429 Ga0495625_0014297
430 Ga0495625_0062636
431 Ga0495625_0234845
432 Ga0495686_0000100
433 Ga0495602_0037118
434 Ga0495615_0000029
435 Ga0495626_0002540
436 Ga0496101_0181510
437 Ga0496105_0007137
438 Ga0496109_0463566
439 Ga0496110_0042354
440 Ga0496112_0070018
441 Ga0496117_0003055
442 Ga0496118_0001099
443 Ga0496118_0055583
444 Ga0496119_0050675
445 Ga0496121_0014090
446 Ga0496121_0020283
447 Ga0496122_0000745
448 Ga0496122_0000811
449 Ga0496123_0000364
450 Ga0496123_0002386
451 Ga0496124_0002834
452 Ga0496125_0007632
453 Ga0501290_000378
454 Ga0501292_000004
455 Ga0501297_000559
456 Ga0501300_001436
457 Ga0501314_002805
458 Ga0501034_0006938
459 Ga0501039_0086892
460 Ga0501042_0134187
461 Ga0501043_0063191
462 Ga0501046_0002983
463 Ga0501047_0028975
464 Ga0501217_020142
465 Ga0501223_000018
466 Ga0501223_013768
467 Ga0501224_000002
468 Ga0501224_000421
469 Ga0501227_003256
470 Ga0501233_000006
471 Ga0501233_002404
472 Ga0501235_000017
473 Ga0501235_004557
474 Ga0501257_000138
475 Ga0501259_000200
476 Ga0501261_000035
477 Ga0501225_0000049
478 Ga0501225_0004418
479 Ga0501229_004044
480 Ga0501245_000486
481 Ga0501279_000048
482 Ga0501280_000023
483 Ga0501281_00441
484 Ga0501282_000019
485 Ga0501044_0019940
486 Ga0501226_000026
487 nmdc:mga07m45_27091_c2
488 nmdc:mga07m45_348_c1
489 nmdc:mga08y16_21_c1
490 Ga0500643_000326
491 Ga0500643_000577
492 Ga0500592_004652
493 Ga0500604_0003081
494 Ga0500627_0000103
495 Ga0500611_000251
496 2511130998
497 2819551505
498 2846035893
499 2846042302
500 3007316477

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13531

SBP_bac_11

Bacterial extracellular solute-binding protein

51

304

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sbp-assembly1.cif.gz_A 1.7 angstroms refined structure of sulfate-binding protein involved in active transport and novel mode of sulfate binding 0.9713 33 337
5um2-assembly1.cif.gz_A functional and structural characterization of a sulfate-binding protein (sbp) from xanthomonas citri 0.966 30 339
1sbp-assembly1.cif.gz_A 1.7 angstroms refined structure of sulfate-binding protein involved in active transport and novel mode of sulfate binding 0.9559 33 337
5um2-assembly1.cif.gz_A functional and structural characterization of a sulfate-binding protein (sbp) from xanthomonas citri 0.9452 30 339
6ddn-assembly2.cif.gz_B the sulfate-binding protein subi from mycobacterium tuberculosis h37rv 0.9078 33 324
ID Description Score Start End Superfamily
1sbpA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9858 33 305 3.40.190.10
af_P0AG78_114_326_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9781 125 335 3.40.190.10
af_P16700_120_332_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9742 125 335 3.40.190.10
1sbpA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9687 125 337 3.40.190.10
af_P0AG78_114_326_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9646 125 335 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A4Q3JC24-F1-model_v4 deleted 0.9869 129 337
AF-A0A3M5B481-F1-model_v4 deleted 0.9862 242 338
AF-A0A376J751-F1-model_v4 deleted 0.9861 238 339
AF-A0A1Q6U6I7-F1-model_v4 deleted 0.9854 81 339
AF-A0A4S3LGN5-F1-model_v4 Sulfate ABC transporter substrate-binding protein 0.9849 164 338 GO:0042597
GO:1902358

Map