F364089

General Info

Members Datasets Scaffolds Average Seq Length
253 198 507 380

Family's Representative Sequence

Representative Sequence 3300025292|Ga0209676_1000484|Ga0209676_100048417
Length 405
Sequence MRDAETGAFDTRRQGAPRPRDMDTKILEGIRVLELGQVLAGPFAGAILADLGADVVKLERVEGGDDARHMGPAFRHGDALNFHVFNRGKRSVAIDLKSEEGMAAFETLAAGADILIHNLRPGVTQSMGIDGPSLCARHPRLIYCEISAFGHTGPLRMQPGYEPLIQAFSGLSSINGGPDDPPMRTGASVCDQGTGMWAVIGALALLQRRHLTGRGGVVSTSLLETALVWTGQKADAYVNEGRLPDRHRSGHPGFVPYEAFDTADAPLLICCGNDRLFAKFAHELGRDDWTTDARFAGNRQRLQHKAALFDQIGPLLRARTRADWMARFTAAGVPCAPVHTVPEAVAHPQVEALGMLQPVPGEDFRLTALPMSIDGVRPAHRAVAPRLGEHNAALGAPPVPPRDGA

Samples

Sample ID Description Type Environment
1 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
63 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
64 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
103 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
116 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
117 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
118 3300042123 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_082716_2228 Metagenome Rhizosphere
119 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
120 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
125 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
128 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
131 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
132 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
135 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
136 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
137 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
138 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
139 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
140 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
141 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
149 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
164 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
165 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
174 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
175 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
176 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
177 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
178 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
181 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
182 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
183 2643221672 Variovorax sp. Root434 Isolate Unclassified
184 2738541307 Variovorax sp. GV008 Isolate Unclassified
185 2818991446 Variovorax sp. 1180 Isolate Unclassified
186 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
187 2899924645 Variovorax sp. 369 Isolate Unclassified
188 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
189 2904456579 Variovorax sp. 2002 Isolate Unclassified
190 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
191 2928037797 Variovorax sp. 1126 Isolate Unclassified
192 2928044640 Variovorax sp. 1128 Isolate Unclassified
193 2928051484 Variovorax sp. 1133 Isolate Unclassified
194 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
195 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
196 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
197 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
198 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.28
Metatranscriptomes 0
Isolates 6.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.58
Nodule 0
Rhizoplane 0.4
Rhizosphere 65.61
Stem 0
Stem Tuber 0
Unclassified 0.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209676_1000484 3300025292 Bacteria 65041
2 SwRhRL2b_contig_1605474 2162886007 Bacteria 1743
3 rootH1_10064815 3300003316 Bacteria 5266
4 rootH1_10064815 3300003323 Bacteria 4225
5 rootH2_10054547 3300003320 Bacteria 2798
6 rootL2_10018200 3300003322 Bacteria 4019
7 rootH1_10047462 3300003323 Bacteria 4157
8 Ga0055535_1000215 3300003761 Bacteria 61211
9 Ga0055542_1000004 3300003762 Bacteria 553532
10 Ga0055536_1001474 3300003781 Bacteria 14143
11 Ga0055536_1003536 3300003781 Bacteria 8366
12 Ga0055536_1009336 3300003781 Bacteria 4067
13 Ga0055540_1000500 3300003792 Bacteria 29870
14 Ga0055540_1001303 3300003792 Bacteria 15098
15 Ga0055540_1002027 3300003792 Bacteria 11225
16 Ga0055531_10000427 3300003794 Bacteria 39928
17 Ga0065704_10071095 3300005289 Bacteria 13200
18 Ga0070680_100270069 3300005336 Bacteria 1440
19 Ga0070680_100324305 3300005336 Bacteria 1307
20 Ga0070691_10000985 3300005341 Bacteria 11633
21 Ga0070673_100155245 3300005364 Bacteria 1942
22 Ga0070659_100102434 3300005366 Bacteria 2305
23 Ga0070703_10004029 3300005406 Bacteria 4152
24 Ga0070714_100099895 3300005435 Bacteria 2554
25 Ga0070710_10219256 3300005437 Bacteria 1210
26 Ga0070700_100101180 3300005441 Bacteria 1899
27 Ga0070694_100083396 3300005444 Bacteria 2227
28 Ga0070708_100332310 3300005445 Bacteria 1432
29 Ga0070662_100009412 3300005457 Bacteria 6386
30 Ga0070662_100045364 3300005457 Bacteria 3153
31 Ga0070662_100098634 3300005457 Bacteria 2207
32 Ga0070707_100137471 3300005468 Bacteria 2377
33 Ga0070698_100080255 3300005471 Bacteria 3257
34 Ga0070699_100014598 3300005518 Bacteria 6756
35 Ga0070699_100040323 3300005518 Bacteria 4044
36 Ga0070679_100271511 3300005530 Bacteria 1650
37 Ga0070697_100018107 3300005536 Bacteria 5551
38 Ga0070697_100304628 3300005536 Bacteria 1370
39 Ga0070695_100015077 3300005545 Bacteria 4665
40 Ga0070695_100132272 3300005545 Bacteria 1721
41 Ga0070665_100091417 3300005548 Bacteria 3048
42 Ga0070704_100025341 3300005549 Bacteria 3904
43 Ga0070704_100086350 3300005549 Bacteria 2325
44 Ga0070664_100277358 3300005564 Bacteria 1511
45 Ga0068857_100105933 3300005577 Bacteria 2525
46 Ga0070702_100011641 3300005615 Bacteria 4381
47 Ga0068866_10045847 3300005718 Bacteria 2195
48 Ga0068861_100212009 3300005719 Bacteria 1632
49 Ga0068863_100019376 3300005841 Bacteria 6508
50 Ga0068860_100216965 3300005843 Bacteria 1857
51 Ga0068862_100007365 3300005844 Bacteria 9134
52 Ga0081455_10119005 3300005937 Bacteria 2084
53 Ga0081538_10041531 3300005981 Bacteria 2918
54 Ga0070715_10019436 3300006163 Bacteria 2605
55 Ga0075369_10037959 3300006186 Bacteria 2053
56 Ga0075370_10000432 3300006353 Bacteria 15555
57 Ga0075370_10002121 3300006353 Bacteria 9051
58 Ga0075370_10037964 3300006353 Bacteria 2710
59 Ga0075428_100000420 3300006844 Bacteria 42195
60 Ga0075430_100000614 3300006846 Bacteria 27161
61 Ga0075431_100000641 3300006847 Bacteria 29614
62 Ga0075431_100003134 3300006847 Bacteria 15996
63 Ga0075431_100003193 3300006847 Bacteria 15855
64 Ga0075431_100346629 3300006847 Bacteria 1494
65 Ga0075433_10029698 3300006852 Bacteria 4660
66 Ga0075433_10297121 3300006852 Bacteria 1430
67 Ga0075434_100010113 3300006871 Bacteria 8835
68 Ga0075429_100000177 3300006880 Bacteria 41340
69 Ga0075429_100114952 3300006880 Bacteria 2353
70 Ga0075435_100070451 3300007076 Bacteria 2854
71 Ga0105244_10000716 3300009036 Bacteria 28634
72 Ga0111539_10000552 3300009094 Bacteria 47861
73 Ga0105245_10022330 3300009098 Bacteria 5554
74 Ga0114129_10013466 3300009147 Bacteria 11653
75 Ga0114129_10064521 3300009147 Bacteria 5111
76 Ga0105243_10000875 3300009148 Bacteria 28415
77 Ga0105243_10002921 3300009148 Bacteria 14143
78 Ga0105243_10007804 3300009148 Bacteria 8228
79 Ga0105242_10004701 3300009176 Bacteria 10570
80 Ga0105242_10005850 3300009176 Bacteria 9474
81 Ga0105249_10191049 3300009553 Bacteria 1999
82 Ga0105246_10009254 3300011119 Bacteria 6069
83 Ga0157373_10050476 3300013100 Bacteria 2962
84 Ga0157371_10048563 3300013102 Bacteria 3016
85 Ga0182008_10021581 3300014497 Bacteria 3306
86 Ga0182008_10025270 3300014497 Bacteria 3017
87 Ga0182006_1000647 3300015261 Bacteria 24709
88 Ga0182007_10001796 3300015262 Bacteria 11189
89 Ga0213876_10063500 3300021384 Bacteria 1950
90 Ga0213875_10000047 3300021388 Bacteria 148835
91 Ga0209672_101997 3300025228 Bacteria 5671
92 Ga0209258_100022 3300025242 Bacteria 553584
93 Ga0209148_1000034 3300025254 Bacteria 553584
94 Ga0209676_1000356 3300025292 Bacteria 86657
95 Ga0209676_1001016 3300025292 Bacteria 32817
96 Ga0209025_1001608 3300025294 Bacteria 28307
97 Ga0209050_1000575 3300025298 Bacteria 59696
98 Ga0209051_1000073 3300025303 Bacteria 208874
99 Ga0209051_1000141 3300025303 Bacteria 135837
100 Ga0209051_1000444 3300025303 Bacteria 55960
101 Ga0209051_1000636 3300025303 Bacteria 40363
102 Ga0209257_1000531 3300025304 Bacteria 66089
103 Ga0209257_1007756 3300025304 Bacteria 6384
104 Ga0207655_1001172 3300025728 Bacteria 25452
105 Ga0207660_10037632 3300025917 Bacteria 3373
106 Ga0207660_10199511 3300025917 Bacteria 1562
107 Ga0207646_10036945 3300025922 Bacteria 4407
108 Ga0207646_10116833 3300025922 Bacteria 2396
109 Ga0207646_10147451 3300025922 Bacteria 2121
110 Ga0207706_10040590 3300025933 Bacteria 4124
111 Ga0207706_10340224 3300025933 Bacteria 1305
112 Ga0207686_10005386 3300025934 Bacteria 6858
113 Ga0207709_10000389 3300025935 Bacteria 43589
114 Ga0207709_10000755 3300025935 Bacteria 25534
115 Ga0207709_10022265 3300025935 Bacteria 3594
116 Ga0207689_10041977 3300025942 Bacteria 3785
117 Ga0207651_10064521 3300025960 Bacteria 2564
118 Ga0207712_10033942 3300025961 Bacteria 3453
119 Ga0207703_10420111 3300026035 Bacteria 1244
120 Ga0207708_10137753 3300026075 Bacteria 1912
121 Ga0207708_10162132 3300026075 Bacteria 1766
122 Ga0207648_10079355 3300026089 Bacteria 2863
123 Ga0207674_10012496 3300026116 Bacteria 9489
124 Ga0207674_10049489 3300026116 Bacteria 4298
125 Ga0207698_10041422 3300026142 Bacteria 3431
126 Ga0209813_10001241 3300027866 Bacteria 5691
127 Ga0207428_10000173 3300027907 Bacteria 90064
128 Ga0268266_10051532 3300028379 Bacteria 3533
129 Ga0268265_10005702 3300028380 Bacteria 8502
130 Ga0268264_10315160 3300028381 Bacteria 1477
131 Ga0307515_10000195 3300028794 Bacteria 148138
132 Ga0307515_10049503 3300028794 Bacteria 6318
133 Ga0307515_10173323 3300028794 Bacteria 2139
134 Ga0307511_10000058 3300030521 Bacteria 93342
135 Ga0265327_10007049 3300031251 Bacteria 8805
136 Ga0307513_10049624 3300031456 Bacteria 4544
137 Ga0307408_100164505 3300031548 Bacteria 1765
138 Ga0307408_100204456 3300031548 Bacteria 1601
139 Ga0265314_10001423 3300031711 Bacteria 26797
140 Ga0307405_10030784 3300031731 Bacteria 3150
141 Ga0307412_10231098 3300031911 Bacteria 1424
142 Ga0307416_100059977 3300032002 Bacteria 3095
143 Ga0373930_0017159 3300034816 Bacteria 1377
144 Ga0373942_0010747 3300035207 Bacteria 2158
145 Ga0373935_0089414 3300035692 Bacteria 2014
146 Ga0373933_0011411 3300035724 Bacteria 4896
147 Ga0373947_0305522 3300035725 Bacteria 1061
148 Ga0373937_0052018 3300036401 Bacteria 3754
149 Ga0373925_0027791 3300037068 Unclassified 4141
150 Ga0395900_0192733 3300037418 Bacteria 2066
151 Ga0395900_0270249 3300037418 Bacteria 1695
152 Ga0395898_0021513 3300037466 Bacteria 6541
153 Ga0395905_0029310 3300037471 Bacteria 5186
154 Ga0436364_0118735 3300037853 Bacteria 19655
155 Ga0436364_0940689 3300037853 Bacteria 2724
156 Ga0436364_1154020 3300037853 Bacteria 1153
157 Ga0395901_0001529 3300038443 Bacteria 23982
158 Ga0439436_0038067 3300041404 Bacteria 1384
159 Ga0439442_004599 3300042002 Bacteria 2742
160 Ga0439432_045988 3300042006 Bacteria 1372
161 Ga0450911_000116 3300042115 Bacteria 31956
162 Ga0450921_002667 3300042123 Bacteria 1207
163 Ga0439434_0035359 3300042435 Bacteria 1527
164 Ga0450918_003146 3300042531 Bacteria 3080
165 Ga0451577_0001837 3300042876 Bacteria 27069
166 Ga0466960_0025067 3300044901 Bacteria 2696
167 Ga0451576_0002497 3300045051 Bacteria 27315
168 Ga0495627_020856 3300046453 Bacteria 2179
169 Ga0495590_0000249 3300046457 Bacteria 29281
170 Ga0495638_0000447 3300046460 Bacteria 49544
171 Ga0495651_0006907 3300046462 Bacteria 8677
172 Ga0495584_0000157 3300046491 Bacteria 47544
173 Ga0495594_0212557 3300046499 Bacteria 1103
174 Ga0495607_0000156 3300046501 Bacteria 71824
175 Ga0495632_0000314 3300046519 Bacteria 46709
176 Ga0495644_0000043 3300046523 Bacteria 60633
177 Ga0495640_0101615 3300046533 Bacteria 1887
178 Ga0495597_0000493 3300046542 Bacteria 32926
179 Ga0495656_0055382 3300046615 Bacteria 1710
180 Ga0495599_0038521 3300046678 Bacteria 3004
181 Ga0495669_0099142 3300046684 Bacteria 1352
182 Ga0495671_0000169 3300046692 Bacteria 57678
183 Ga0495649_0000246 3300046694 Bacteria 47913
184 Ga0495660_0026733 3300046810 Bacteria 3268
185 Ga0495604_0022786 3300047317 Bacteria 4999
186 Ga0495672_0000383 3300047320 Bacteria 54579
187 Ga0495675_0047936 3300047444 Bacteria 2718
188 Ga0495615_0002546 3300048090 Bacteria 2934
189 Ga0496102_0024108 3300048905 Bacteria 5407
190 Ga0496117_0067380 3300048920 Bacteria 2422
191 Ga0496121_0001614 3300048924 Bacteria 37428
192 Ga0496122_0000034 3300048925 Bacteria 320661
193 Ga0496122_0080912 3300048925 Bacteria 2263
194 Ga0496123_0000069 3300048926 Bacteria 201579
195 Ga0496123_0051349 3300048926 Bacteria 2746
196 Ga0496124_0019477 3300048927 Bacteria 6314
197 Ga0496124_0028633 3300048927 Bacteria 4981
198 Ga0496125_0004561 3300048928 Bacteria 15887
199 Ga0496125_0007014 3300048928 Bacteria 12054
200 Ga0496125_0009490 3300048928 Bacteria 9988
201 Ga0496125_0037488 3300048928 Bacteria 4214
202 Ga0496126_0121001 3300048929 Bacteria 2270
203 Ga0501034_0064876 3300049571 Bacteria 3665
204 Ga0501038_0256832 3300049574 Bacteria 1382
205 Ga0501042_0176111 3300049578 Bacteria 1543
206 Ga0501073_0031524 3300049589 Bacteria 3782
207 Ga0501035_0074760 3300049822 Bacteria 2997
208 nmdc:mga03683_211_c2 3300050489 Bacteria 13532
209 nmdc:mga03n38_6804_c1 3300050490 Bacteria 4005
210 nmdc:mga00v17_2043_c1 3300050491 Bacteria 10396
211 nmdc:mga0yw44_31153_c1 3300050492 Bacteria 3099
212 nmdc:mga0k408_44837_c1 3300050493 Bacteria 2551
213 nmdc:mga04h51_15834_c1 3300050495 Bacteria 2179
214 nmdc:mga07m45_15078_c1 3300050496 Bacteria 4127
215 nmdc:mga07m45_7170_c1 3300050496 Bacteria 5679
216 nmdc:mga05p37_31954_c1 3300050507 Bacteria 6435
217 nmdc:mga05p37_60879_c1 3300050507 Bacteria 4648
218 nmdc:mga09592_445_c1 3300050508 Bacteria 30603
219 nmdc:mga0qj67_1493_c1 3300050509 Bacteria 16406
220 nmdc:mga06r32_195987_c1 3300050510 Bacteria 2007
221 nmdc:mga06r32_2459_c1 3300050510 Bacteria 16570
222 nmdc:mga06r32_286_c1 3300050510 Bacteria 41965
223 nmdc:mga08y16_1199_c1 3300050511 Bacteria 25581
224 nmdc:mga0n895_31579_c1 3300050512 Bacteria 5073
225 nmdc:mga0rr50_24304_c1 3300050513 Bacteria 4195
226 nmdc:mga0a205_24799_c1 3300050515 Bacteria 5706
227 nmdc:mga0sz30_34821_c1 3300050516 Bacteria 2099
228 Ga0500643_008128 3300053087 Bacteria 4153
229 Ga0500644_0019672 3300053088 Bacteria 1996
230 Ga0500646_0007494 3300053090 Bacteria 2789
231 Ga0500607_007674 3300053121 Bacteria 6641
232 Ga0500655_014578 3300053133 Bacteria 1439
233 Ga0500568_0037377 3300053139 Bacteria 1970
234 Ga0500568_0051670 3300053139 Bacteria 1616
235 Ga0500586_002092 3300053145 Bacteria 4407
236 Ga0500604_0001459 3300053151 Bacteria 6593
237 Ga0500616_0094751 3300053153 Bacteria 1470
238 2644398369 2643221672 Bacteria 6322190
239 2738883875 2738541307 Bacteria 8606193
240 2819596182 2818991446 Bacteria 7757362
241 2862516434 2862507626 Bacteria 9425308
242 2899925563 2899924645 Bacteria 7487985
243 2904453899 2904449895 Bacteria 6927402
244 2904462383 2904456579 Bacteria 6819253
245 2904547381 2904541872 Bacteria 8915136
246 2928038342 2928037797 Bacteria 7273642
247 2928046053 2928044640 Bacteria 7271509
248 2928053752 2928051484 Bacteria 7773759
249 2928067295 2928064002 Bacteria 7419480
250 2929165118 2929160207 Bacteria 9075316
251 2929203713 2929199973 Bacteria 7260745
252 2939632456 2939631187 Bacteria 6118131
253 2939635014 2939631187 Bacteria 6118131
254 8055915441 8055909800 Bacteria 7278581
255 Ga0209676_1000484
256 SwRhRL2b_contig_1605474
257 rootH1_10064815
258 rootH2_10054547
259 rootL2_10018200
260 rootH1_10047462
261 Ga0055535_1000215
262 Ga0055542_1000004
263 Ga0055536_1001474
264 Ga0055536_1003536
265 Ga0055536_1009336
266 Ga0055540_1000500
267 Ga0055540_1001303
268 Ga0055540_1002027
269 Ga0055531_10000427
270 Ga0065704_10071095
271 Ga0070680_100270069
272 Ga0070680_100324305
273 Ga0070691_10000985
274 Ga0070673_100155245
275 Ga0070659_100102434
276 Ga0070703_10004029
277 Ga0070714_100099895
278 Ga0070710_10219256
279 Ga0070700_100101180
280 Ga0070694_100083396
281 Ga0070708_100332310
282 Ga0070662_100009412
283 Ga0070662_100045364
284 Ga0070662_100098634
285 Ga0070707_100137471
286 Ga0070698_100080255
287 Ga0070699_100014598
288 Ga0070699_100040323
289 Ga0070679_100271511
290 Ga0070697_100018107
291 Ga0070697_100304628
292 Ga0070695_100015077
293 Ga0070695_100132272
294 Ga0070665_100091417
295 Ga0070704_100025341
296 Ga0070704_100086350
297 Ga0070664_100277358
298 Ga0068857_100105933
299 Ga0070702_100011641
300 Ga0068866_10045847
301 Ga0068861_100212009
302 Ga0068863_100019376
303 Ga0068860_100216965
304 Ga0068862_100007365
305 Ga0081455_10119005
306 Ga0081538_10041531
307 Ga0070715_10019436
308 Ga0075369_10037959
309 Ga0075370_10000432
310 Ga0075370_10002121
311 Ga0075370_10037964
312 Ga0075428_100000420
313 Ga0075430_100000614
314 Ga0075431_100000641
315 Ga0075431_100003134
316 Ga0075431_100003193
317 Ga0075431_100346629
318 Ga0075433_10029698
319 Ga0075433_10297121
320 Ga0075434_100010113
321 Ga0075429_100000177
322 Ga0075429_100114952
323 Ga0075435_100070451
324 Ga0105244_10000716
325 Ga0111539_10000552
326 Ga0105245_10022330
327 Ga0114129_10013466
328 Ga0114129_10064521
329 Ga0105243_10000875
330 Ga0105243_10002921
331 Ga0105243_10007804
332 Ga0105242_10004701
333 Ga0105242_10005850
334 Ga0105249_10191049
335 Ga0105246_10009254
336 Ga0157373_10050476
337 Ga0157371_10048563
338 Ga0182008_10021581
339 Ga0182008_10025270
340 Ga0182006_1000647
341 Ga0182007_10001796
342 Ga0213876_10063500
343 Ga0213875_10000047
344 Ga0209672_101997
345 Ga0209258_100022
346 Ga0209148_1000034
347 Ga0209676_1000356
348 Ga0209676_1001016
349 Ga0209025_1001608
350 Ga0209050_1000575
351 Ga0209051_1000073
352 Ga0209051_1000141
353 Ga0209051_1000444
354 Ga0209051_1000636
355 Ga0209257_1000531
356 Ga0209257_1007756
357 Ga0207655_1001172
358 Ga0207660_10037632
359 Ga0207660_10199511
360 Ga0207646_10036945
361 Ga0207646_10116833
362 Ga0207646_10147451
363 Ga0207706_10040590
364 Ga0207706_10340224
365 Ga0207686_10005386
366 Ga0207709_10000389
367 Ga0207709_10000755
368 Ga0207709_10022265
369 Ga0207689_10041977
370 Ga0207651_10064521
371 Ga0207712_10033942
372 Ga0207703_10420111
373 Ga0207708_10137753
374 Ga0207708_10162132
375 Ga0207648_10079355
376 Ga0207674_10012496
377 Ga0207674_10049489
378 Ga0207698_10041422
379 Ga0209813_10001241
380 Ga0207428_10000173
381 Ga0268266_10051532
382 Ga0268265_10005702
383 Ga0268264_10315160
384 Ga0307515_10000195
385 Ga0307515_10049503
386 Ga0307515_10173323
387 Ga0307511_10000058
388 Ga0265327_10007049
389 Ga0307513_10049624
390 Ga0307408_100164505
391 Ga0307408_100204456
392 Ga0265314_10001423
393 Ga0307405_10030784
394 Ga0307412_10231098
395 Ga0307416_100059977
396 Ga0373930_0017159
397 Ga0373942_0010747
398 Ga0373935_0089414
399 Ga0373933_0011411
400 Ga0373947_0305522
401 Ga0373937_0052018
402 Ga0373925_0027791
403 Ga0395900_0192733
404 Ga0395900_0270249
405 Ga0395898_0021513
406 Ga0395905_0029310
407 Ga0436364_0118735
408 Ga0436364_0940689
409 Ga0436364_1154020
410 Ga0395901_0001529
411 Ga0439436_0038067
412 Ga0439442_004599
413 Ga0439432_045988
414 Ga0450911_000116
415 Ga0450921_002667
416 Ga0439434_0035359
417 Ga0450918_003146
418 Ga0451577_0001837
419 Ga0466960_0025067
420 Ga0451576_0002497
421 Ga0495627_020856
422 Ga0495590_0000249
423 Ga0495638_0000447
424 Ga0495651_0006907
425 Ga0495584_0000157
426 Ga0495594_0212557
427 Ga0495607_0000156
428 Ga0495632_0000314
429 Ga0495644_0000043
430 Ga0495640_0101615
431 Ga0495597_0000493
432 Ga0495656_0055382
433 Ga0495599_0038521
434 Ga0495669_0099142
435 Ga0495671_0000169
436 Ga0495649_0000246
437 Ga0495660_0026733
438 Ga0495604_0022786
439 Ga0495672_0000383
440 Ga0495675_0047936
441 Ga0495615_0002546
442 Ga0496102_0024108
443 Ga0496117_0067380
444 Ga0496121_0001614
445 Ga0496122_0000034
446 Ga0496122_0080912
447 Ga0496123_0000069
448 Ga0496123_0051349
449 Ga0496124_0019477
450 Ga0496124_0028633
451 Ga0496125_0004561
452 Ga0496125_0007014
453 Ga0496125_0009490
454 Ga0496125_0037488
455 Ga0496126_0121001
456 Ga0501034_0064876
457 Ga0501038_0256832
458 Ga0501042_0176111
459 Ga0501073_0031524
460 Ga0501035_0074760
461 nmdc:mga03683_211_c2
462 nmdc:mga03n38_6804_c1
463 nmdc:mga00v17_2043_c1
464 nmdc:mga0yw44_31153_c1
465 nmdc:mga0k408_44837_c1
466 nmdc:mga04h51_15834_c1
467 nmdc:mga07m45_15078_c1
468 nmdc:mga07m45_7170_c1
469 nmdc:mga05p37_31954_c1
470 nmdc:mga05p37_60879_c1
471 nmdc:mga09592_445_c1
472 nmdc:mga0qj67_1493_c1
473 nmdc:mga06r32_195987_c1
474 nmdc:mga06r32_2459_c1
475 nmdc:mga06r32_286_c1
476 nmdc:mga08y16_1199_c1
477 nmdc:mga0n895_31579_c1
478 nmdc:mga0rr50_24304_c1
479 nmdc:mga0a205_24799_c1
480 nmdc:mga0sz30_34821_c1
481 Ga0500643_008128
482 Ga0500644_0019672
483 Ga0500646_0007494
484 Ga0500607_007674
485 Ga0500655_014578
486 Ga0500568_0037377
487 Ga0500568_0051670
488 Ga0500586_002092
489 Ga0500604_0001459
490 Ga0500616_0094751
491 2644398369
492 2738883875
493 2819596182
494 2862516434
495 2899925563
496 2904453899
497 2904462383
498 2904547381
499 2928038342
500 2928046053
501 2928053752
502 2928067295
503 2929165118
504 2929203713
505 2939632456
506 2939635014
507 8055915441

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

27

391

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9193 8 366
1pt8-assembly1.cif.gz_B crystal structure of the yfdw gene product of e. coli, in complex with oxalate and acetyl-coa 0.906 6 366
5yit-assembly1.cif.gz_B crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9039 6 366
5yx6-assembly2.cif.gz_C crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.9028 6 366
5yit-assembly2.cif.gz_D crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9025 6 365
ID Description Score Start End Superfamily
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9698 223 308 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9688 223 311 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9579 223 311 3.30.1540.10
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9466 24 230 3.40.50.10540
af_Q9VDL4_46_327_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9442 7 276 3.40.50.10540
ID Description Score Start End GO Terms
AF-A0A7C7GAT2-F1-model_v4 CoA transferase 0.9599 36 365 GO:0008410
AF-A0A1F3BEW9-F1-model_v4 Carnitine dehydratase 0.9595 24 330 GO:0008410
AF-A0A261RXI3-F1-model_v4 Carnitine dehydratase 0.9593 5 365 GO:0008410
AF-A0A2D7F5V0-F1-model_v4 CoA transferase 0.9593 24 253 GO:0008410
AF-A0A6P8QH96-F1-model_v4 Succinate--hydroxymethylglutarate CoA-transferase isoform X6 0.9589 6 325 GO:0005739
GO:0047369

Map