F364536

General Info

Members Datasets Scaffolds Average Seq Length
254 206 240 260

Family's Representative Sequence

Representative Sequence 3300002705|JGI25156J39149_1004848|JGI25156J39149_10048485
Length 304
Sequence MTIRNRVKTASVALLYRSAFDPKRTVRARGVGDPMVRSNRALGYAPVMTPRQIHAARYVTPLREGGSLPAVIEGDDDGLYVLKFRGAGQGAKALVAEWIAGSLARACGLPVPEIVFVELDADLARTEPDPEIQDLIRSSAGLNLALDYLPGAINFDPVAEQVDATLASQIVWLDAFVSNVDRTARNPNLMMWHNRLYLIDHGAALYFHHAWNGRDVDPTRPFPLIRDHVLLSSADRLAAIDAAMAERLTPAVIEDIIAAVPDTWLQGPDAFADAATQRAAYNEYLVRRLAAPRAFVQGAIDARA

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
4 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
5 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
6 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
7 2818991457 Xanthomonas translucens 569 Isolate Unclassified
8 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
9 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
10 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
11 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
12 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
13 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
14 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
15 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
16 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
17 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
18 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
21 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
22 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
23 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
25 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
26 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
27 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
28 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
29 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
30 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
31 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
32 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
33 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
34 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
35 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
36 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
37 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
38 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
39 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
40 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
41 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
42 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
43 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
44 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
45 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
46 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
47 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
48 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
49 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
50 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
51 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
52 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
53 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
54 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
55 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
56 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
57 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
58 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
59 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
60 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
61 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
62 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
63 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
64 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
65 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
66 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
67 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
68 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
69 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
70 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
71 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
72 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
73 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
78 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
79 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
83 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
84 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
85 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
86 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
87 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
88 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
89 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
90 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
91 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
92 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
93 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
94 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
95 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
99 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
100 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
102 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
103 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
105 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
106 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
110 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
142 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
145 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
146 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
147 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
148 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
149 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
150 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
151 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
152 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
153 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
154 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
155 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
156 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
157 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
158 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
159 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
160 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
161 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
162 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
163 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
164 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
165 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
166 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
167 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
168 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
169 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
170 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
171 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
172 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
173 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
174 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
175 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
176 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
177 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
178 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
179 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
180 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
181 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
182 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
183 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
184 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
185 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
186 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
187 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
194 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
195 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
196 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
197 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
198 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
199 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
200 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
201 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
202 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
203 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
204 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
205 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
206 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.49
Metatranscriptomes 0
Isolates 5.51

Biome Distribution

Category Percentage (%)
Aerial Root 0.79
Bulb 0
Endosphere 15.75
Nodule 0
Rhizoplane 3.54
Rhizosphere 65.75
Stem 0
Stem Tuber 0
Unclassified 14.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1006416 3300001915 Bacteria 2364
2 JGI24737J22298_10021879 3300001990 Bacteria 2034
3 JGI24735J21928_10002866 3300002067 Bacteria 5945
4 JGI25156J39149_1004848 3300002705 Bacteria 4006
5 JGI25162J39368_1000028 3300002737 Bacteria 221876
6 JGI25157J39369_1000737 3300002741 Bacteria 17379
7 JGI25163J39215_1000352 3300002771 Bacteria 15246
8 JGI25164J39214_1000012 3300002772 Bacteria 255140
9 JGI25406J46586_10018168 3300003203 Unclassified 2894
10 JGI25165J46597_1000048 3300003214 Bacteria 254392
11 rootL2_10237916 3300003322 Bacteria 4284
12 Ga0055538_1002260 3300003751 Bacteria 2946
13 Ga0055533_1002472 3300003756 Bacteria 4182
14 Ga0055535_1000027 3300003761 Bacteria 202056
15 Ga0055542_1000034 3300003762 Bacteria 231972
16 Ga0055529_1000056 3300003763 Bacteria 196316
17 Ga0065714_10064451 3300005288 Bacteria 75830
18 Ga0065714_10167770 3300005288 Bacteria 1019
19 Ga0065704_10072777 3300005289 Bacteria 8026
20 Ga0065707_10085537 3300005295 Bacteria 6083
21 Ga0070676_10075886 3300005328 Bacteria 2028
22 Ga0070676_10112285 3300005328 Bacteria 1699
23 Ga0070683_100011866 3300005329 Bacteria 7551
24 Ga0070670_100006993 3300005331 Bacteria 9565
25 Ga0070670_100096053 3300005331 Bacteria 2549
26 Ga0068869_100020841 3300005334 Bacteria 4502
27 Ga0068869_100166807 3300005334 Bacteria 1718
28 Ga0070660_100096652 3300005339 Bacteria 2336
29 Ga0070689_100232413 3300005340 Bacteria 1516
30 Ga0070668_100000764 3300005347 Bacteria 22117
31 Ga0070675_100023812 3300005354 Bacteria 4899
32 Ga0070675_100143662 3300005354 Bacteria 2041
33 Ga0070674_100069019 3300005356 Bacteria 2492
34 Ga0070673_100013933 3300005364 Bacteria 5583
35 Ga0070673_100062066 3300005364 Bacteria 2968
36 Ga0070673_100136325 3300005364 Bacteria 2066
37 Ga0070673_100537465 3300005364 Bacteria 1061
38 Ga0070667_100012302 3300005367 Bacteria 7080
39 Ga0070705_100060951 3300005440 Bacteria 2240
40 Ga0070663_100143882 3300005455 Bacteria 1823
41 Ga0070678_100031491 3300005456 Bacteria 3660
42 Ga0068867_100421335 3300005459 Bacteria 1131
43 Ga0070685_10384348 3300005466 Bacteria 968
44 Ga0070684_100002217 3300005535 Bacteria 14342
45 Ga0070672_100011685 3300005543 Bacteria 6131
46 Ga0070672_100083946 3300005543 Bacteria 2557
47 Ga0070672_100141947 3300005543 Bacteria 1982
48 Ga0070696_100045628 3300005546 Unclassified 3036
49 Ga0070693_100119395 3300005547 Bacteria 1633
50 Ga0070665_100118484 3300005548 Bacteria 2650
51 Ga0070704_100337118 3300005549 Bacteria 1268
52 Ga0068855_100000604 3300005563 Bacteria 44010
53 Ga0070664_100082839 3300005564 Bacteria 2766
54 Ga0070664_100157354 3300005564 Bacteria 2008
55 Ga0068857_100442878 3300005577 Bacteria 1214
56 Ga0068859_100002367 3300005617 Bacteria 19182
57 Ga0068864_100000394 3300005618 Bacteria 38005
58 Ga0068861_100148296 3300005719 Bacteria 1922
59 Ga0068870_10005018 3300005840 Bacteria 5750
60 Ga0068863_100003759 3300005841 Bacteria 15023
61 Ga0068858_100002372 3300005842 Bacteria 19049
62 Ga0068858_100040353 3300005842 Bacteria 4328
63 Ga0068860_100002534 3300005843 Bacteria 19135
64 Ga0068862_100006174 3300005844 Bacteria 9978
65 Ga0068862_100020668 3300005844 Bacteria 5500
66 Ga0081539_10000416 3300005985 Bacteria 90711
67 Ga0075364_10029116 3300006051 Bacteria 3540
68 Ga0075366_10135590 3300006195 Bacteria 1486
69 Ga0075370_10012922 3300006353 Bacteria 4425
70 Ga0075431_100354906 3300006847 Bacteria 1473
71 Ga0068865_100345277 3300006881 Bacteria 1204
72 Ga0097620_100002367 3300006931 Bacteria 19182
73 Ga0105250_10003529 3300009092 Bacteria 7374
74 Ga0105240_10001059 3300009093 Bacteria 48690
75 Ga0105240_10248389 3300009093 Bacteria 2059
76 Ga0105240_10446684 3300009093 Bacteria 1448
77 Ga0111539_10004652 3300009094 Bacteria 17934
78 Ga0105245_10059010 3300009098 Bacteria 3454
79 Ga0105243_10405960 3300009148 Bacteria 1267
80 Ga0105248_10000481 3300009177 Bacteria 45536
81 Ga0105248_10009754 3300009177 Bacteria 10579
82 Ga0105237_10005097 3300009545 Bacteria 14914
83 Ga0105249_10028384 3300009553 Bacteria 5050
84 Ga0105249_10235431 3300009553 Bacteria 1808
85 Ga0105028_101284 3300009993 Bacteria 2643
86 Ga0105239_10174051 3300010375 Unclassified 2408
87 Ga0157373_10000044 3300013100 Bacteria 113369
88 Ga0157371_10047993 3300013102 Bacteria 3035
89 Ga0157369_10022951 3300013105 Bacteria 6958
90 Ga0157369_10086827 3300013105 Bacteria 3341
91 Ga0157372_10838394 3300013307 Bacteria 1067
92 Ga0163163_10003836 3300014325 Bacteria 12799
93 Ga0182008_10000016 3300014497 Bacteria 241246
94 Ga0157379_10000030 3300014968 Bacteria 85371
95 Ga0157379_10008167 3300014968 Bacteria 9089
96 Ga0157379_10027781 3300014968 Bacteria 5036
97 Ga0163161_10001267 3300017792 Bacteria 18868
98 Ga0163161_10140393 3300017792 Bacteria 1829
99 Ga0213876_10000195 3300021384 Bacteria 62910
100 Ga0209435_105796 3300025206 Bacteria 1383
101 Ga0209760_100275 3300025207 Bacteria 18738
102 Ga0209784_100016 3300025224 Bacteria 481036
103 Ga0209566_101102 3300025225 Bacteria 10434
104 Ga0209674_100470 3300025226 Bacteria 17765
105 Ga0207427_100019 3300025231 Bacteria 513977
106 Ga0209437_100054 3300025233 Bacteria 366715
107 Ga0209258_100039 3300025242 Bacteria 386366
108 Ga0209258_100674 3300025242 Bacteria 23972
109 Ga0209646_1000541 3300025246 Bacteria 16271
110 Ga0209026_1000012 3300025250 Bacteria 480426
111 Ga0209148_1000001 3300025254 Bacteria 2545271
112 Ga0209759_1000330 3300025256 Bacteria 62205
113 Ga0209233_1000002 3300025261 Bacteria 2501366
114 Ga0209455_1000039 3300025272 Bacteria 437734
115 Ga0209050_1001012 3300025298 Bacteria 35092
116 Ga0209051_1038133 3300025303 Bacteria 1753
117 Ga0209257_1025847 3300025304 Bacteria 1996
118 Ga0207696_1000327 3300025711 Bacteria 50417
119 Ga0207682_10002362 3300025893 Bacteria 8499
120 Ga0207682_10037962 3300025893 Bacteria 1953
121 Ga0207682_10148047 3300025893 Bacteria 1057
122 Ga0207647_10008670 3300025904 Bacteria 7263
123 Ga0207645_10074757 3300025907 Bacteria 2169
124 Ga0207643_10023581 3300025908 Bacteria 3393
125 Ga0207695_10060198 3300025913 Bacteria 3932
126 Ga0207695_10104075 3300025913 Bacteria 2829
127 Ga0207671_10026256 3300025914 Bacteria 4367
128 Ga0207657_10508317 3300025919 Bacteria 944
129 Ga0207649_10155543 3300025920 Bacteria 1579
130 Ga0207694_10121140 3300025924 Bacteria 2089
131 Ga0207650_10010535 3300025925 Bacteria 6345
132 Ga0207659_10082238 3300025926 Bacteria 2384
133 Ga0207687_10088730 3300025927 Bacteria 2250
134 Ga0207706_10380227 3300025933 Bacteria 1225
135 Ga0207670_10174827 3300025936 Bacteria 1613
136 Ga0207669_10434429 3300025937 Bacteria 1036
137 Ga0207711_10008675 3300025941 Bacteria 8505
138 Ga0207689_10000215 3300025942 Bacteria 51175
139 Ga0207679_10196068 3300025945 Bacteria 1683
140 Ga0207667_10005615 3300025949 Bacteria 15304
141 Ga0207651_10125893 3300025960 Bacteria 1952
142 Ga0207651_10708401 3300025960 Bacteria 887
143 Ga0207668_10003820 3300025972 Bacteria 8878
144 Ga0207640_10654185 3300025981 Bacteria 896
145 Ga0207703_10001229 3300026035 Bacteria 23958
146 Ga0207678_10085424 3300026067 Bacteria 2697
147 Ga0207708_10072165 3300026075 Bacteria 2645
148 Ga0207641_10006639 3300026088 Bacteria 9714
149 Ga0207648_10051034 3300026089 Bacteria 3616
150 Ga0207648_10224873 3300026089 Bacteria 1669
151 Ga0207674_10433576 3300026116 Bacteria 1270
152 Ga0207675_100000751 3300026118 Bacteria 32282
153 Ga0207675_100355187 3300026118 Bacteria 1437
154 Ga0207683_10008755 3300026121 Bacteria 8639
155 Ga0209974_10017445 3300027876 Bacteria 2382
156 Ga0268266_10001116 3300028379 Bacteria 33517
157 Ga0268264_10000812 3300028381 Bacteria 33666
158 Ga0268264_10373462 3300028381 Bacteria 1364
159 Ga0307515_10010445 3300028794 Bacteria 17788
160 Ga0307515_10014397 3300028794 Bacteria 14667
161 Ga0307515_10145309 3300028794 Bacteria 2515
162 Ga0265328_10119057 3300031239 Bacteria 984
163 Ga0265327_10004154 3300031251 Bacteria 13067
164 Ga0307513_10053079 3300031456 Bacteria 4360
165 Ga0307513_10064517 3300031456 Unclassified 3859
166 Ga0307408_100208149 3300031548 Bacteria 1588
167 Ga0307410_10116459 3300031852 Bacteria 1942
168 Ga0307407_10060084 3300031903 Bacteria 2217
169 Ga0307407_10150959 3300031903 Bacteria 1510
170 Ga0307412_10141280 3300031911 Bacteria 1764
171 Ga0307416_100284667 3300032002 Bacteria 1632
172 Ga0307416_101010239 3300032002 Unclassified 935
173 Ga0307414_10000004 3300032004 Bacteria 472218
174 Ga0307414_10020627 3300032004 Bacteria 4112
175 Ga0307414_10209742 3300032004 Bacteria 1591
176 Ga0373936_0018430 3300035113 Bacteria 2697
177 Ga0436365_0131921 3300039437 Bacteria 4366
178 Ga0436365_1600837 3300039437 Bacteria 192134
179 Ga0451789_1267131 3300041443 Bacteria 1135
180 Ga0451793_1852317 3300041452 Bacteria 2627
181 Ga0451800_0879301 3300041459 Bacteria 987
182 Ga0439449_0016794 3300042007 Bacteria 2750
183 Ga0439464_0037727 3300042439 Bacteria 1371
184 Ga0466969_0015262 3300044656 Bacteria 4026
185 Ga0466969_0170149 3300044656 Bacteria 999
186 Ga0466966_0004995 3300044684 Bacteria 8720
187 Ga0466961_0003073 3300044693 Bacteria 10370
188 Ga0466964_0000835 3300044706 Bacteria 10083
189 Ga0453684_0817511 3300044712 Bacteria 1004
190 Ga0466971_0007170 3300044719 Bacteria 4851
191 Ga0466960_0164382 3300044901 Bacteria 1194
192 Ga0466958_0112203 3300045836 Bacteria 1702
193 Ga0495638_0032141 3300046460 Bacteria 3367
194 Ga0495638_0044214 3300046460 Bacteria 2807
195 Ga0495650_0002924 3300046471 Bacteria 12972
196 Ga0495606_0014536 3300046507 Bacteria 6129
197 Ga0495620_0039405 3300046515 Bacteria 2088
198 Ga0495632_0002311 3300046519 Bacteria 14671
199 Ga0495663_0000022 3300046525 Bacteria 109849
200 Ga0495663_0011590 3300046525 Bacteria 2453
201 Ga0495609_0000116 3300046538 Bacteria 92903
202 Ga0496102_0008744 3300048905 Bacteria 8688
203 Ga0496102_0199435 3300048905 Bacteria 1886
204 Ga0496108_0035438 3300048911 Bacteria 4148
205 Ga0496113_0031460 3300048916 Bacteria 3852
206 Ga0496113_0070697 3300048916 Bacteria 2654
207 Ga0496115_0000181 3300048918 Bacteria 58749
208 Ga0496116_0000037 3300048919 Bacteria 374675
209 Ga0496117_0000136 3300048920 Bacteria 160556
210 Ga0496118_0000329 3300048921 Bacteria 81056
211 Ga0496119_0000017 3300048922 Bacteria 309779
212 Ga0496120_0059009 3300048923 Bacteria 2152
213 Ga0496122_0001788 3300048925 Bacteria 32917
214 Ga0496122_0005387 3300048925 Bacteria 15272
215 Ga0496123_0001998 3300048926 Bacteria 26349
216 Ga0496123_0004547 3300048926 Bacteria 14473
217 Ga0496124_0001288 3300048927 Bacteria 38071
218 Ga0496125_0010402 3300048928 Bacteria 9413
219 Ga0496125_0207288 3300048928 Bacteria 1277
220 Ga0496125_0239022 3300048928 Bacteria 1155
221 Ga0496126_0001239 3300048929 Bacteria 41409
222 Ga0496126_0093355 3300048929 Bacteria 2642
223 nmdc:mga0qj67_84372_c1 3300050509 Bacteria 2547
224 nmdc:mga08y16_669017_c1 3300050511 Bacteria 1041
225 nmdc:mga0a205_424943_c1 3300050515 Bacteria 1191
226 Ga0500578_0000683 3300053086 Bacteria 40592
227 Ga0500646_0002324 3300053090 Bacteria 4939
228 Ga0500651_0007069 3300053093 Bacteria 6523
229 Ga0500651_0021562 3300053093 Bacteria 4017
230 Ga0500641_0148566 3300053096 Bacteria 1012
231 Ga0500650_0070730 3300053098 Bacteria 1631
232 Ga0500562_012781 3300053108 Bacteria 2138
233 Ga0500628_007544 3300053129 Bacteria 1867
234 Ga0500642_0001074 3300053130 Bacteria 7877
235 Ga0500652_000182 3300053131 Bacteria 24295
236 Ga0500655_001304 3300053133 Bacteria 4730
237 Ga0500577_0017833 3300053142 Bacteria 2270
238 Ga0500604_0001774 3300053151 Bacteria 6032
239 Ga0500622_0000028 3300053156 Bacteria 218994
240 Ga0466962_0005217 3300061719 Bacteria 6248

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026089 Ga0207648_10224873 Ga0207648_102248733 218
2 3300031903 Ga0307407_10150959 Ga0307407_101509593 219
3 3300044901 Ga0466960_0164382 Ga0466960_0164382_241_1008 221
4 3300031239 Ga0265328_10119057 Ga0265328_101190571 226
5 3300050511 nmdc:mga08y16_669017_c1 nmdc:mga08y16_669017_c1_57_791 226
6 3300005328 Ga0070676_10075886 Ga0070676_100758862 232
7 3300005331 Ga0070670_100096053 Ga0070670_1000960533 232
8 3300005364 Ga0070673_100537465 Ga0070673_1005374651 232
9 3300005456 Ga0070678_100031491 Ga0070678_1000314915 232
10 3300005466 Ga0070685_10384348 Ga0070685_103843481 232
11 3300005564 Ga0070664_100082839 Ga0070664_1000828394 232
12 3300010375 Ga0105239_10174051 Ga0105239_101740512 232
13 3300025893 Ga0207682_10148047 Ga0207682_101480471 232
14 3300025920 Ga0207649_10155543 Ga0207649_101555432 232
15 3300025926 Ga0207659_10082238 Ga0207659_100822382 232
16 3300025933 Ga0207706_10380227 Ga0207706_103802272 232
17 3300025945 Ga0207679_10196068 Ga0207679_101960681 232
18 3300025960 Ga0207651_10708401 Ga0207651_107084011 232
19 3300032004 Ga0307414_10020627 Ga0307414_100206275 234
20 3300032004 Ga0307414_10209742 Ga0307414_102097423 234
21 3300009093 Ga0105240_10248389 Ga0105240_102483894 235
22 3300050515 nmdc:mga0a205_424943_c1 nmdc:mga0a205_424943_c1_292_1041 235
23 3300005331 Ga0070670_100006993 Ga0070670_1000069938 236
24 3300005334 Ga0068869_100020841 Ga0068869_1000208414 236
25 3300005340 Ga0070689_100232413 Ga0070689_1002324132 236
26 3300005347 Ga0070668_100000764 Ga0070668_10000076413 236
27 3300005354 Ga0070675_100023812 Ga0070675_1000238125 236
28 3300005364 Ga0070673_100062066 Ga0070673_1000620662 236
29 3300005367 Ga0070667_100012302 Ga0070667_1000123022 236
30 3300005459 Ga0068867_100421335 Ga0068867_1004213352 236
31 3300005543 Ga0070672_100141947 Ga0070672_1001419472 236
32 3300005617 Ga0068859_100002367 Ga0068859_10000236714 236
33 3300005618 Ga0068864_100000394 Ga0068864_10000039410 236
34 3300005840 Ga0068870_10005018 Ga0068870_100050184 236
35 3300005841 Ga0068863_100003759 Ga0068863_1000037596 236
36 3300005842 Ga0068858_100002372 Ga0068858_1000023728 236
37 3300005843 Ga0068860_100002534 Ga0068860_1000025348 236
38 3300005844 Ga0068862_100006174 Ga0068862_1000061748 236
39 3300006931 Ga0097620_100002367 Ga0097620_10000236714 236
40 3300009148 Ga0105243_10405960 Ga0105243_104059602 236
41 3300009177 Ga0105248_10009754 Ga0105248_100097547 236
42 3300009553 Ga0105249_10235431 Ga0105249_102354312 236
43 3300014325 Ga0163163_10003836 Ga0163163_100038368 236
44 3300014968 Ga0157379_10008167 Ga0157379_100081678 236
45 3300025908 Ga0207643_10023581 Ga0207643_100235813 236
46 3300025925 Ga0207650_10010535 Ga0207650_100105352 236
47 3300025936 Ga0207670_10174827 Ga0207670_101748272 236
48 3300025941 Ga0207711_10008675 Ga0207711_100086758 236
49 3300025942 Ga0207689_10000215 Ga0207689_1000021510 236
50 3300025972 Ga0207668_10003820 Ga0207668_100038203 236
51 3300026035 Ga0207703_10001229 Ga0207703_1000122915 236
52 3300026088 Ga0207641_10006639 Ga0207641_1000663913 236
53 3300026089 Ga0207648_10051034 Ga0207648_100510345 236
54 3300026118 Ga0207675_100000751 Ga0207675_10000075127 236
55 3300028381 Ga0268264_10000812 Ga0268264_1000081210 236
56 3300032002 Ga0307416_101010239 Ga0307416_1010102392 236
57 3300048905 Ga0496102_0008744 Ga0496102_0008744_3032_3814 236
58 3300048911 Ga0496108_0035438 Ga0496108_0035438_1010_1792 236
59 iso_pu_bacteria 2643221603 2644031118 236
60 3300005548 Ga0070665_100118484 Ga0070665_1001184845 237
61 3300009098 Ga0105245_10059010 Ga0105245_100590104 238
62 3300025927 Ga0207687_10088730 Ga0207687_100887302 238
63 3300028794 Ga0307515_10014397 Ga0307515_100143974 238
64 3300031456 Ga0307513_10064517 Ga0307513_100645173 238
65 3300044656 Ga0466969_0015262 Ga0466969_0015262_1389_2165 239
66 3300044684 Ga0466966_0004995 Ga0466966_0004995_7215_7991 239
67 3300044693 Ga0466961_0003073 Ga0466961_0003073_2877_3653 239
68 3300044706 Ga0466964_0000835 Ga0466964_0000835_2749_3525 239
69 3300044719 Ga0466971_0007170 Ga0466971_0007170_1199_1975 239
70 3300045836 Ga0466958_0112203 Ga0466958_0112203_669_1445 239
71 3300061719 Ga0466962_0005217 Ga0466962_0005217_4922_5698 239
72 iso_pu_bacteria 2818991457 2819663074 240
73 iso_pu_bacteria 2842718218 2842720232 240
74 iso_pu_bacteria 2842780639 2842780967 240
75 iso_pu_bacteria 2919130084 2919133786 240
76 iso_pu_bacteria 2929195423 2929197477 240
77 3300044712 Ga0453684_0817511 Ga0453684_0817511_15_878 241
78 iso_pu_bacteria 2585428057 2587729485 243
79 iso_pu_bacteria 2585428058 2587734000 243
80 iso_pu_bacteria 2585428061 2587753232 243
81 iso_pu_bacteria 2585428095 2587868148 243
82 iso_pu_bacteria 2588253510 2588294562 243
83 iso_pu_bacteria 2977243572 2977247235 243
84 iso_pu_bacteria 2984572630 2984573084 243
85 iso_pu_bacteria 2984606641 2984610535 243
86 3300005546 Ga0070696_100045628 Ga0070696_1000456284 244
87 3300005547 Ga0070693_100119395 Ga0070693_1001193952 244
88 3300005577 Ga0068857_100442878 Ga0068857_1004428782 244
89 3300006051 Ga0075364_10029116 Ga0075364_100291164 244
90 3300017792 Ga0163161_10140393 Ga0163161_101403932 244
91 3300026116 Ga0207674_10433576 Ga0207674_104335762 244
92 3300027876 Ga0209974_10017445 Ga0209974_100174453 244
93 3300028794 Ga0307515_10010445 Ga0307515_1001044515 244
94 3300028794 Ga0307515_10145309 Ga0307515_101453092 244
95 3300031548 Ga0307408_100208149 Ga0307408_1002081493 244
96 3300031903 Ga0307407_10060084 Ga0307407_100600842 244
97 3300046471 Ga0495650_0002924 Ga0495650_0002924_10854_11633 244
98 3300046525 Ga0495663_0011590 Ga0495663_0011590_1484_2260 244
99 3300003203 JGI25406J46586_10018168 JGI25406J46586_100181683 245
100 3300005455 Ga0070663_100143882 Ga0070663_1001438823 245
101 3300005985 Ga0081539_10000416 Ga0081539_1000041680 245
102 3300025981 Ga0207640_10654185 Ga0207640_106541851 245
103 3300026067 Ga0207678_10085424 Ga0207678_100854244 245
104 3300041452 Ga0451793_1852317 Ga0451793_1852317_462_1241 245
105 3300044656 Ga0466969_0170149 Ga0466969_0170149_58_855 245
106 3300001990 JGI24737J22298_10021879 JGI24737J22298_100218792 246
107 3300002067 JGI24735J21928_10002866 JGI24735J21928_100028666 246
108 3300002705 JGI25156J39149_1004848 JGI25156J39149_10048485 246
109 3300002737 JGI25162J39368_1000028 JGI25162J39368_1000028147 246
110 3300002741 JGI25157J39369_1000737 JGI25157J39369_100073712 246
111 3300002771 JGI25163J39215_1000352 JGI25163J39215_100035214 246
112 3300002772 JGI25164J39214_1000012 JGI25164J39214_1000012163 246
113 3300003214 JGI25165J46597_1000048 JGI25165J46597_100004886 246
114 3300003751 Ga0055538_1002260 Ga0055538_10022602 246
115 3300003756 Ga0055533_1002472 Ga0055533_10024727 246
116 3300003761 Ga0055535_1000027 Ga0055535_100002774 246
117 3300003762 Ga0055542_1000034 Ga0055542_1000034146 246
118 3300003763 Ga0055529_1000056 Ga0055529_1000056111 246
119 3300005295 Ga0065707_10085537 Ga0065707_100855375 246
120 3300005328 Ga0070676_10112285 Ga0070676_101122853 246
121 3300005354 Ga0070675_100143662 Ga0070675_1001436622 246
122 3300005356 Ga0070674_100069019 Ga0070674_1000690193 246
123 3300005364 Ga0070673_100136325 Ga0070673_1001363253 246
124 3300005543 Ga0070672_100083946 Ga0070672_1000839462 246
125 3300005549 Ga0070704_100337118 Ga0070704_1003371181 246
126 3300005719 Ga0068861_100148296 Ga0068861_1001482962 246
127 3300006195 Ga0075366_10135590 Ga0075366_101355902 246
128 3300006353 Ga0075370_10012922 Ga0075370_100129223 246
129 3300009093 Ga0105240_10446684 Ga0105240_104466841 246
130 3300009094 Ga0111539_10004652 Ga0111539_100046522 246
131 3300009553 Ga0105249_10028384 Ga0105249_100283842 246
132 3300009993 Ga0105028_101284 Ga0105028_1012842 246
133 3300013105 Ga0157369_10022951 Ga0157369_100229513 246
134 3300013307 Ga0157372_10838394 Ga0157372_108383941 246
135 3300014968 Ga0157379_10000030 Ga0157379_100000302 246
136 3300021384 Ga0213876_10000195 Ga0213876_1000019523 246
137 3300025206 Ga0209435_105796 Ga0209435_1057961 246
138 3300025207 Ga0209760_100275 Ga0209760_10027514 246
139 3300025224 Ga0209784_100016 Ga0209784_10001688 246
140 3300025225 Ga0209566_101102 Ga0209566_1011028 246
141 3300025226 Ga0209674_100470 Ga0209674_10047029 246
142 3300025231 Ga0207427_100019 Ga0207427_100019325 246
143 3300025233 Ga0209437_100054 Ga0209437_100054186 246
144 3300025242 Ga0209258_100039 Ga0209258_10003988 246
145 3300025242 Ga0209258_100674 Ga0209258_1006743 246
146 3300025246 Ga0209646_1000541 Ga0209646_100054114 246
147 3300025250 Ga0209026_1000012 Ga0209026_1000012397 246
148 3300025254 Ga0209148_1000001 Ga0209148_10000011358 246
149 3300025256 Ga0209759_1000330 Ga0209759_100033056 246
150 3300025261 Ga0209233_1000002 Ga0209233_1000002872 246
151 3300025272 Ga0209455_1000039 Ga0209455_100003988 246
152 3300025298 Ga0209050_1001012 Ga0209050_100101222 246
153 3300025303 Ga0209051_1038133 Ga0209051_10381332 246
154 3300025304 Ga0209257_1025847 Ga0209257_10258473 246
155 3300025711 Ga0207696_1000327 Ga0207696_100032714 246
156 3300025893 Ga0207682_10002362 Ga0207682_100023624 246
157 3300025893 Ga0207682_10037962 Ga0207682_100379623 246
158 3300025904 Ga0207647_10008670 Ga0207647_100086704 246
159 3300025907 Ga0207645_10074757 Ga0207645_100747574 246
160 3300025913 Ga0207695_10104075 Ga0207695_101040756 246
161 3300025937 Ga0207669_10434429 Ga0207669_104344292 246
162 3300025960 Ga0207651_10125893 Ga0207651_101258933 246
163 3300026075 Ga0207708_10072165 Ga0207708_100721652 246
164 3300026118 Ga0207675_100355187 Ga0207675_1003551872 246
165 3300026121 Ga0207683_10008755 Ga0207683_100087558 246
166 3300028381 Ga0268264_10373462 Ga0268264_103734622 246
167 3300031456 Ga0307513_10053079 Ga0307513_100530796 246
168 3300035113 Ga0373936_0018430 Ga0373936_0018430_1203_1985 246
169 3300039437 Ga0436365_0131921 Ga0436365_0131921_1002_1784 246
170 3300039437 Ga0436365_1600837 Ga0436365_1600837_128171_128953 246
171 3300041443 Ga0451789_1267131 Ga0451789_1267131_57_848 246
172 3300041459 Ga0451800_0879301 Ga0451800_0879301_28_819 246
173 3300042007 Ga0439449_0016794 Ga0439449_0016794_1141_1914 246
174 3300042439 Ga0439464_0037727 Ga0439464_0037727_320_1120 246
175 3300046460 Ga0495638_0032141 Ga0495638_0032141_2165_2956 246
176 3300046460 Ga0495638_0044214 Ga0495638_0044214_1916_2698 246
177 3300046515 Ga0495620_0039405 Ga0495620_0039405_272_1063 246
178 3300046519 Ga0495632_0002311 Ga0495632_0002311_10943_11734 246
179 3300048916 Ga0496113_0031460 Ga0496113_0031460_971_1744 246
180 3300048918 Ga0496115_0000181 Ga0496115_0000181_24436_25209 246
181 3300048928 Ga0496125_0207288 Ga0496125_0207288_165_947 246
182 3300053086 Ga0500578_0000683 Ga0500578_0000683_24992_25783 246
183 3300053090 Ga0500646_0002324 Ga0500646_0002324_1045_1836 246
184 3300053093 Ga0500651_0007069 Ga0500651_0007069_5554_6354 246
185 3300053093 Ga0500651_0021562 Ga0500651_0021562_655_1446 246
186 3300053096 Ga0500641_0148566 Ga0500641_0148566_164_955 246
187 3300053098 Ga0500650_0070730 Ga0500650_0070730_660_1451 246
188 3300053108 Ga0500562_012781 Ga0500562_012781_1134_1925 246
189 3300053129 Ga0500628_007544 Ga0500628_007544_592_1383 246
190 3300053130 Ga0500642_0001074 Ga0500642_0001074_5247_6038 246
191 3300053131 Ga0500652_000182 Ga0500652_000182_12047_12838 246
192 3300053133 Ga0500655_001304 Ga0500655_001304_3356_4147 246
193 3300053142 Ga0500577_0017833 Ga0500577_0017833_268_1059 246
194 3300053151 Ga0500604_0001774 Ga0500604_0001774_1333_2124 246
195 3300053156 Ga0500622_0000028 Ga0500622_0000028_163960_164751 246
196 3300001915 JGI24741J21665_1006416 JGI24741J21665_10064162 247
197 3300003322 rootL2_10237916 rootL2_102379164 247
198 3300005288 Ga0065714_10064451 Ga0065714_1006445151 247
199 3300005288 Ga0065714_10167770 Ga0065714_101677702 247
200 3300005289 Ga0065704_10072777 Ga0065704_100727778 247
201 3300005329 Ga0070683_100011866 Ga0070683_1000118669 247
202 3300005334 Ga0068869_100166807 Ga0068869_1001668072 247
203 3300005339 Ga0070660_100096652 Ga0070660_1000966523 247
204 3300005364 Ga0070673_100013933 Ga0070673_1000139335 247
205 3300005440 Ga0070705_100060951 Ga0070705_1000609512 247
206 3300005535 Ga0070684_100002217 Ga0070684_10000221713 247
207 3300005543 Ga0070672_100011685 Ga0070672_10001168510 247
208 3300005563 Ga0068855_100000604 Ga0068855_10000060413 247
209 3300005564 Ga0070664_100157354 Ga0070664_1001573542 247
210 3300005842 Ga0068858_100040353 Ga0068858_1000403533 247
211 3300005844 Ga0068862_100020668 Ga0068862_1000206686 247
212 3300006847 Ga0075431_100354906 Ga0075431_1003549062 247
213 3300006881 Ga0068865_100345277 Ga0068865_1003452772 247
214 3300009092 Ga0105250_10003529 Ga0105250_100035294 247
215 3300009093 Ga0105240_10001059 Ga0105240_1000105934 247
216 3300009177 Ga0105248_10000481 Ga0105248_1000048118 247
217 3300009545 Ga0105237_10005097 Ga0105237_100050979 247
218 3300013100 Ga0157373_10000044 Ga0157373_1000004456 247
219 3300013102 Ga0157371_10047993 Ga0157371_100479933 247
220 3300013105 Ga0157369_10086827 Ga0157369_100868274 247
221 3300014497 Ga0182008_10000016 Ga0182008_10000016208 247
222 3300014968 Ga0157379_10027781 Ga0157379_100277814 247
223 3300017792 Ga0163161_10001267 Ga0163161_100012674 247
224 3300025913 Ga0207695_10060198 Ga0207695_100601984 247
225 3300025914 Ga0207671_10026256 Ga0207671_100262563 247
226 3300025919 Ga0207657_10508317 Ga0207657_105083172 247
227 3300025924 Ga0207694_10121140 Ga0207694_101211402 247
228 3300025949 Ga0207667_10005615 Ga0207667_100056159 247
229 3300028379 Ga0268266_10001116 Ga0268266_100011167 247
230 3300031251 Ga0265327_10004154 Ga0265327_100041546 247
231 3300031852 Ga0307410_10116459 Ga0307410_101164592 247
232 3300031911 Ga0307412_10141280 Ga0307412_101412802 247
233 3300032002 Ga0307416_100284667 Ga0307416_1002846672 247
234 3300032004 Ga0307414_10000004 Ga0307414_10000004193 247
235 3300046507 Ga0495606_0014536 Ga0495606_0014536_5206_5979 247
236 3300046525 Ga0495663_0000022 Ga0495663_0000022_58008_58781 247
237 3300046538 Ga0495609_0000116 Ga0495609_0000116_81410_82183 247
238 3300048905 Ga0496102_0199435 Ga0496102_0199435_1051_1824 247
239 3300048916 Ga0496113_0070697 Ga0496113_0070697_732_1505 247
240 3300048919 Ga0496116_0000037 Ga0496116_0000037_292736_293509 247
241 3300048920 Ga0496117_0000136 Ga0496117_0000136_79247_80020 247
242 3300048921 Ga0496118_0000329 Ga0496118_0000329_3227_4000 247
243 3300048922 Ga0496119_0000017 Ga0496119_0000017_228669_229442 247
244 3300048923 Ga0496120_0059009 Ga0496120_0059009_270_1043 247
245 3300048925 Ga0496122_0001788 Ga0496122_0001788_13071_13844 247
246 3300048925 Ga0496122_0005387 Ga0496122_0005387_12056_12853 247
247 3300048926 Ga0496123_0001998 Ga0496123_0001998_8749_9522 247
248 3300048926 Ga0496123_0004547 Ga0496123_0004547_2418_3215 247
249 3300048927 Ga0496124_0001288 Ga0496124_0001288_7529_8302 247
250 3300048928 Ga0496125_0010402 Ga0496125_0010402_3575_4348 247
251 3300048928 Ga0496125_0239022 Ga0496125_0239022_315_1103 247
252 3300048929 Ga0496126_0001239 Ga0496126_0001239_29508_30281 247
253 3300048929 Ga0496126_0093355 Ga0496126_0093355_877_1674 247
254 3300050509 nmdc:mga0qj67_84372_c1 nmdc:mga0qj67_84372_c1_1385_2185 247

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20613

HipA_2

HipA-like kinase

56

293

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ejw-assembly1.cif.gz_A crystal structure of chromobox homolog 7 (cbx7) chromodomain with ms351 0.7577 7 29
3h3h-assembly1.cif.gz_A crystal structure of a snoal-like protein of unknown function (bth_ii0226) from burkholderia thailandensis e264 at 1.60 a resolution 0.6991 11 38
6fai-assembly1.cif.gz_l structure of a eukaryotic cytoplasmic pre-40s ribosomal subunit 0.5402 9 147
5yh0-assembly1.cif.gz_B the structure of drfam20c1 0.5279 2 245
5yh0-assembly1.cif.gz_B the structure of drfam20c1 0.5208 2 245
ID Description Score Start End Superfamily
af_Q9U3C6_94_162_2.40.50.40 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P); 0.8955 7 37 2.40.50.40
5ejwA00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P); 0.7577 7 29 2.40.50.40
1zylA01 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1; 0.7312 9 38 3.30.200.70
af_K7KYW5_592_703_3.40.1110.10 Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N 0.7231 11 36 3.40.1110.10
4u68A00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P); 0.7125 7 42 2.40.50.40
ID Description Score Start End GO Terms
AF-A0A2P8E5Z8-F1-model_v4 HipA-like kinase domain-containing protein 0.9794 1 246
AF-A0A7H1AQU2-F1-model_v4 Aminotransferase class I and II 0.9746 5 246 GO:0008483
AF-A0A1M6GFS8-F1-model_v4 HipA-like kinase domain-containing protein 0.9742 1 246
AF-A0A1I1JRJ8-F1-model_v4 HipA-like kinase domain-containing protein 0.9742 3 246
AF-A0A4Q8L4R3-F1-model_v4 Aminotransferase class I and II 0.9725 5 246 GO:0008483

Feature Viewer

pLDDT pTM Quality
88.16 0.87 High
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Predicted Structure (AlphaFold2)

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