F364584

General Info

Members Datasets Scaffolds Average Seq Length
254 142 254 276

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10197398|Ga0065707_101973981
Length 302
Sequence VTVNSHSSSVDDRPSTVASPRSAVSGRRAAPSLMASSMRIFDLSLGQLLWSRRSVFLALLLGGPVVLAAAIRIVTATTPFWKFSINGARVGGPALFGMMIWLLYIRFIVPVLGVFYGTALIADEVDDKTITYLFTRPVPRGAVLIGKYLAYVACTALLVLPSVVLVYFLIVPLGGGSIGASFPALLTDLGMLIAGLIAYGAVFAWVGARLKRPLVLGLIFTFGWEPAVLLFPGYLKQLTVAYYLQALVPHAMPQDSAVNILMQVFREVPTVTVSLMSLAGIVVIALWFAARAVERREYVLEQ

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
98 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
99 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
100 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
101 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
102 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
103 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
104 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
105 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
106 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
107 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
108 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
109 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
117 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
120 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.57
Rhizosphere 98.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10069924 3300005290 Bacteria 6487
2 Ga0065707_10169916 3300005295 Bacteria 1492
3 Ga0065707_10197398 3300005295 Unclassified 1328
4 Ga0070676_10094334 3300005328 Bacteria 1838
5 Ga0070690_100097613 3300005330 Unclassified 1944
6 Ga0070670_100012253 3300005331 Bacteria 7336
7 Ga0070670_100106512 3300005331 Bacteria 2416
8 Ga0068869_100104881 3300005334 Bacteria 2143
9 Ga0068869_100130657 3300005334 Unclassified 1930
10 Ga0070680_100084607 3300005336 Bacteria 2620
11 Ga0070680_100180866 3300005336 Bacteria 1776
12 Ga0070660_100007807 3300005339 Bacteria 7463
13 Ga0070691_10006601 3300005341 Bacteria 5310
14 Ga0070668_100050095 3300005347 Bacteria 3214
15 Ga0070669_100010650 3300005353 Bacteria 6528
16 Ga0070669_100078925 3300005353 Bacteria 2447
17 Ga0070669_100185387 3300005353 Bacteria 1630
18 Ga0070675_100000352 3300005354 Bacteria 31035
19 Ga0070675_100238189 3300005354 Bacteria 1589
20 Ga0070674_100048199 3300005356 Bacteria 2923
21 Ga0070673_100093213 3300005364 Bacteria 2466
22 Ga0070673_100168453 3300005364 Bacteria 1868
23 Ga0070709_10132631 3300005434 Unclassified 1702
24 Ga0070709_10277295 3300005434 Bacteria 1217
25 Ga0070714_100001306 3300005435 Bacteria 17997
26 Ga0070701_10008022 3300005438 Bacteria 4541
27 Ga0070711_100074044 3300005439 Bacteria 2408
28 Ga0070705_100006785 3300005440 Bacteria 5631
29 Ga0070705_100037456 3300005440 Unclassified 2736
30 Ga0070705_100184830 3300005440 Bacteria 1415
31 Ga0070700_100012180 3300005441 Bacteria 4790
32 Ga0070700_100200681 3300005441 Bacteria 1401
33 Ga0070700_100274675 3300005441 Bacteria 1219
34 Ga0070694_100009258 3300005444 Bacteria 6043
35 Ga0070694_100105620 3300005444 Unclassified 1999
36 Ga0070708_100195421 3300005445 Bacteria 1893
37 Ga0070678_100142965 3300005456 Bacteria 1917
38 Ga0070662_100272591 3300005457 Bacteria 1367
39 Ga0070681_10022844 3300005458 Bacteria 6286
40 Ga0070681_10082079 3300005458 Bacteria 3179
41 Ga0068867_100110874 3300005459 Bacteria 2108
42 Ga0068867_100290978 3300005459 Unclassified 1343
43 Ga0070707_100077326 3300005468 Bacteria 3211
44 Ga0070698_100485366 3300005471 Bacteria 1173
45 Ga0070679_100048600 3300005530 Bacteria 4226
46 Ga0070672_100090825 3300005543 Bacteria 2464
47 Ga0070695_100001042 3300005545 Bacteria 15156
48 Ga0070695_100004168 3300005545 Bacteria 8452
49 Ga0070693_100096928 3300005547 Bacteria 1789
50 Ga0070665_100640848 3300005548 Bacteria 1076
51 Ga0070704_100006888 3300005549 Bacteria 6731
52 Ga0070704_100106672 3300005549 Bacteria 2123
53 Ga0070704_100161072 3300005549 Bacteria 1775
54 Ga0070704_100209125 3300005549 Unclassified 1580
55 Ga0068855_100062070 3300005563 Bacteria 4364
56 Ga0068855_100428002 3300005563 Bacteria 1447
57 Ga0068855_100668753 3300005563 Unclassified 1114
58 Ga0068854_100007839 3300005578 Bacteria 6832
59 Ga0068854_100189165 3300005578 Bacteria 1612
60 Ga0070702_100001792 3300005615 Bacteria 8922
61 Ga0068852_100623593 3300005616 Unclassified 1084
62 Ga0068859_100045897 3300005617 Bacteria 4389
63 Ga0068859_100455249 3300005617 Unclassified 1376
64 Ga0068864_100275169 3300005618 Bacteria 1570
65 Ga0068861_100039505 3300005719 Bacteria 3522
66 Ga0068861_100066462 3300005719 Bacteria 2780
67 Ga0068861_100074021 3300005719 Bacteria 2648
68 Ga0068858_100199309 3300005842 Bacteria 1892
69 Ga0068858_100222845 3300005842 Unclassified 1787
70 Ga0068860_100619336 3300005843 Bacteria 1089
71 Ga0068862_100145856 3300005844 Bacteria 2103
72 Ga0068862_100389119 3300005844 Unclassified 1302
73 Ga0081539_10008972 3300005985 Bacteria 8508
74 Ga0070717_10321321 3300006028 Unclassified 1379
75 Ga0097621_100010774 3300006237 Bacteria 6707
76 Ga0097621_100365532 3300006237 Bacteria 1286
77 Ga0075428_100649905 3300006844 Unclassified 1125
78 Ga0075431_100530300 3300006847 Unclassified 1166
79 Ga0075433_10044627 3300006852 Bacteria 3852
80 Ga0075433_10372396 3300006852 Unclassified 1261
81 Ga0075434_100000190 3300006871 Bacteria 40653
82 Ga0075434_100067538 3300006871 Unclassified 3561
83 Ga0075436_100000303 3300006914 Bacteria 31545
84 Ga0075436_100010185 3300006914 Bacteria 6438
85 Ga0075436_100024028 3300006914 Bacteria 4189
86 Ga0075436_100058618 3300006914 Bacteria 2659
87 Ga0075436_100198124 3300006914 Bacteria 1422
88 Ga0097620_100045897 3300006931 Bacteria 4389
89 Ga0097620_100455297 3300006931 Unclassified 1376
90 Ga0075435_100000120 3300007076 Bacteria 44119
91 Ga0075435_100012767 3300007076 Bacteria 6223
92 Ga0075435_100025422 3300007076 Unclassified 4610
93 Ga0105240_10003905 3300009093 Bacteria 23022
94 Ga0105240_10061913 3300009093 Bacteria 4661
95 Ga0105240_10176205 3300009093 Bacteria 2528
96 Ga0105240_10665041 3300009093 Bacteria 1140
97 Ga0111539_10000892 3300009094 Bacteria 38949
98 Ga0111539_10026099 3300009094 Bacteria 7151
99 Ga0111539_10028684 3300009094 Bacteria 6787
100 Ga0111539_10127850 3300009094 Bacteria 2976
101 Ga0111539_10676269 3300009094 Bacteria 1202
102 Ga0105247_10058196 3300009101 Bacteria 2391
103 Ga0114129_10001613 3300009147 Bacteria 30618
104 Ga0114129_10003868 3300009147 Bacteria 21115
105 Ga0114129_10107453 3300009147 Bacteria 3854
106 Ga0114129_10127294 3300009147 Bacteria 3501
107 Ga0114129_10171494 3300009147 Bacteria 2958
108 Ga0105243_10012023 3300009148 Bacteria 6545
109 Ga0105248_10013791 3300009177 Bacteria 8895
110 Ga0105248_10027414 3300009177 Bacteria 6343
111 Ga0105248_10144671 3300009177 Bacteria 2682
112 Ga0105248_10150138 3300009177 Bacteria 2629
113 Ga0105248_10250849 3300009177 Bacteria 1992
114 Ga0105248_10427626 3300009177 Bacteria 1491
115 Ga0105248_10586956 3300009177 Bacteria 1257
116 Ga0105248_10765578 3300009177 Bacteria 1089
117 Ga0105249_10193597 3300009553 Bacteria 1986
118 Ga0157374_10343990 3300013296 Bacteria 1481
119 Ga0157374_10385129 3300013296 Bacteria 1397
120 Ga0157375_10715715 3300013308 Bacteria 1154
121 Ga0157375_11000996 3300013308 Bacteria 976
122 Ga0163163_10027154 3300014325 Bacteria 5481
123 Ga0207697_10030989 3300025315 Unclassified 2189
124 Ga0207697_10058221 3300025315 Bacteria 1605
125 Ga0207645_10003113 3300025907 Bacteria 12717
126 Ga0207654_10152919 3300025911 Bacteria 1483
127 Ga0207707_10046564 3300025912 Bacteria 3778
128 Ga0207707_10089461 3300025912 Bacteria 2691
129 Ga0207695_10013989 3300025913 Bacteria 9532
130 Ga0207695_10086156 3300025913 Bacteria 3169
131 Ga0207695_10146278 3300025913 Bacteria 2307
132 Ga0207660_10074025 3300025917 Bacteria 2485
133 Ga0207660_10089730 3300025917 Bacteria 2276
134 Ga0207660_10389977 3300025917 Unclassified 1120
135 Ga0207657_10128322 3300025919 Bacteria 2081
136 Ga0207657_10133940 3300025919 Bacteria 2029
137 Ga0207652_10074392 3300025921 Bacteria 2958
138 Ga0207646_10039255 3300025922 Bacteria 4261
139 Ga0207646_10288943 3300025922 Bacteria 1482
140 Ga0207681_10012462 3300025923 Bacteria 5247
141 Ga0207681_10036795 3300025923 Bacteria 3231
142 Ga0207681_10267342 3300025923 Bacteria 1341
143 Ga0207650_10028448 3300025925 Bacteria 4008
144 Ga0207650_10301213 3300025925 Bacteria 1309
145 Ga0207659_10000348 3300025926 Bacteria 27635
146 Ga0207659_10208474 3300025926 Bacteria 1565
147 Ga0207687_10505589 3300025927 Bacteria 1009
148 Ga0207664_10047552 3300025929 Bacteria 3371
149 Ga0207706_10176318 3300025933 Bacteria 1878
150 Ga0207709_10008404 3300025935 Bacteria 5711
151 Ga0207669_10015113 3300025937 Bacteria 3884
152 Ga0207691_10040155 3300025940 Bacteria 4325
153 Ga0207691_10071807 3300025940 Bacteria 3123
154 Ga0207711_10026009 3300025941 Bacteria 4909
155 Ga0207711_10061140 3300025941 Bacteria 3248
156 Ga0207711_10167506 3300025941 Bacteria 1992
157 Ga0207711_10427263 3300025941 Bacteria 1232
158 Ga0207689_10089607 3300025942 Bacteria 2527
159 Ga0207689_10094468 3300025942 Unclassified 2456
160 Ga0207651_10070854 3300025960 Bacteria 2468
161 Ga0207651_10089331 3300025960 Bacteria 2249
162 Ga0207640_10003243 3300025981 Bacteria 8766
163 Ga0207703_10016071 3300026035 Bacteria 5837
164 Ga0207703_10129400 3300026035 Bacteria 2178
165 Ga0207703_10130147 3300026035 Bacteria 2172
166 Ga0207708_10009769 3300026075 Bacteria 7119
167 Ga0207708_10072426 3300026075 Bacteria 2640
168 Ga0207708_10341237 3300026075 Bacteria 1227
169 Ga0207648_10005095 3300026089 Bacteria 13315
170 Ga0207648_10116106 3300026089 Bacteria 2352
171 Ga0207648_10205701 3300026089 Bacteria 1747
172 Ga0207648_10293788 3300026089 Unclassified 1456
173 Ga0207648_10381596 3300026089 Bacteria 1274
174 Ga0207675_100006747 3300026118 Bacteria 10855
175 Ga0207675_100082106 3300026118 Bacteria 3023
176 Ga0207675_100239363 3300026118 Bacteria 1753
177 Ga0207683_10008318 3300026121 Bacteria 8875
178 Ga0207683_10056041 3300026121 Bacteria 3457
179 Ga0207698_10416538 3300026142 Bacteria 1288
180 Ga0207428_10003437 3300027907 Bacteria 15383
181 Ga0207428_10011820 3300027907 Bacteria 7694
182 Ga0207428_10360629 3300027907 Unclassified 1068
183 Ga0268266_10318590 3300028379 Bacteria 1455
184 Ga0268265_10010204 3300028380 Bacteria 6340
185 Ga0268265_10436163 3300028380 Viruses 1220
186 Ga0307416_100018242 3300032002 Bacteria 4938
187 Ga0373930_0002141 3300034816 Bacteria 3028
188 Ga0373948_0003392 3300034817 Bacteria 2447
189 Ga0373958_0001502 3300034819 Bacteria 3141
190 Ga0373940_0000174 3300035088 Bacteria 8584
191 Ga0373949_0000905 3300035090 Bacteria 9260
192 Ga0373951_0000634 3300035091 Bacteria 9695
193 Ga0373952_0001241 3300035092 Bacteria 4652
194 Ga0373932_0001716 3300035112 Bacteria 5957
195 Ga0373941_0039363 3300035115 Unclassified 1452
196 Ga0373943_0065095 3300035170 Bacteria 1832
197 Ga0373942_0003430 3300035207 Bacteria 3725
198 Ga0373961_0002792 3300035241 Bacteria 4455
199 Ga0373962_0001292 3300035242 Bacteria 5879
200 Ga0373931_0001780 3300035691 Bacteria 9363
201 Ga0373931_0259705 3300035691 Bacteria 1059
202 Ga0373937_0401799 3300036401 Unclassified 1300
203 Ga0439446_0008477 3300042156 Bacteria 2731
204 Ga0451576_0010525 3300045051 Bacteria 10600
205 Ga0495628_0167749 3300046516 Unclassified 1666
206 Ga0495630_0218708 3300046517 Unclassified 1454
207 Ga0495642_0250692 3300046528 Bacteria 774
208 Ga0495598_0055445 3300046537 Bacteria 1207
209 Ga0495599_0159657 3300046678 Bacteria 1394
210 Ga0495647_0185829 3300046681 Unclassified 906
211 Ga0495684_0165415 3300047471 Unclassified 1648
212 Ga0496108_0239280 3300048911 Viruses 1579
213 Ga0496109_0199690 3300048912 Viruses 1880
214 Ga0496109_0349040 3300048912 Unclassified 1398
215 Ga0496112_0610141 3300048915 Bacteria 1023
216 Ga0501034_0020406 3300049571 Bacteria 6765
217 Ga0501036_0326121 3300049572 Bacteria 1283
218 Ga0501041_0206091 3300049577 Bacteria 1233
219 Ga0501047_0029311 3300049581 Bacteria 5309
220 Ga0501047_0132876 3300049581 Bacteria 2369
221 Ga0501075_0428195 3300049591 Unclassified 1009
222 Ga0501077_0281425 3300049593 Unclassified 1059
223 Ga0501079_0116702 3300049741 Bacteria 2075
224 Ga0501083_0075925 3300049744 Unclassified 2231
225 Ga0501044_0001549 3300049823 Bacteria 26965
226 nmdc:mga05p37_1356_c1 3300050507 Bacteria 28472
227 nmdc:mga05p37_145464_c1 3300050507 Bacteria 2903
228 nmdc:mga05p37_17201_c1 3300050507 Bacteria 8723
229 nmdc:mga05p37_68234_c1 3300050507 Bacteria 4374
230 nmdc:mga05p37_98592_c1 3300050507 Bacteria 3599
231 nmdc:mga09592_171466_c1 3300050508 Unclassified 1876
232 nmdc:mga08y16_155684_c1 3300050511 Bacteria 2375
233 nmdc:mga08y16_16606_c1 3300050511 Bacteria 7743
234 nmdc:mga08y16_3391_c1 3300050511 Bacteria 16521
235 nmdc:mga08y16_392699_c1 3300050511 Bacteria 1421
236 nmdc:mga08y16_4317_c1 3300050511 Bacteria 14849
237 nmdc:mga0n895_36_c1 3300050512 Bacteria 78366
238 nmdc:mga0n895_44764_c1 3300050512 Bacteria 4316
239 nmdc:mga0n895_557651_c1 3300050512 Unclassified 1151
240 nmdc:mga0rr50_101555_c1 3300050513 Bacteria 2261
241 nmdc:mga0rr50_115542_c1 3300050513 Bacteria 2130
242 nmdc:mga0rr50_29_c1 3300050513 Bacteria 106517
243 nmdc:mga08x19_117453_c1 3300050514 Bacteria 1779
244 nmdc:mga08x19_154_c1 3300050514 Bacteria 56260
245 nmdc:mga08x19_97600_c1 3300050514 Unclassified 1946
246 nmdc:mga0a205_103863_c1 3300050515 Bacteria 2740
247 nmdc:mga0a205_156741_c1 3300050515 Bacteria 2175
248 nmdc:mga0a205_435718_c1 3300050515 Unclassified 1172
249 nmdc:mga0a205_9579_c1 3300050515 Bacteria 6807
250 Ga0495619_0260094 3300053085 Bacteria 1203
251 Ga0501084_0129072 3300054114 Bacteria 2128
252 Ga0501084_0226133 3300054114 Bacteria 1579
253 Ga0530510_0331121 3300061734 Unclassified 1142
254 Ga0530510_0548509 3300061734 Bacteria 878

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026089 Ga0207648_10381596 Ga0207648_103815961 216
2 3300047471 Ga0495684_0165415 Ga0495684_0165415_30_743 237
3 3300005336 Ga0070680_100180866 Ga0070680_1001808662 247
4 3300005458 Ga0070681_10082079 Ga0070681_100820794 247
5 3300025917 Ga0207660_10089730 Ga0207660_100897302 247
6 3300046528 Ga0495642_0250692 Ga0495642_0250692_15_758 247
7 3300009147 Ga0114129_10127294 Ga0114129_101272943 248
8 3300050507 nmdc:mga05p37_98592_c1 nmdc:mga05p37_98592_c1_630_1454 248
9 3300005336 Ga0070680_100084607 Ga0070680_1000846072 252
10 3300005339 Ga0070660_100007807 Ga0070660_1000078072 252
11 3300005434 Ga0070709_10132631 Ga0070709_101326312 252
12 3300005563 Ga0068855_100062070 Ga0068855_1000620704 252
13 3300005616 Ga0068852_100623593 Ga0068852_1006235931 252
14 3300009177 Ga0105248_10427626 Ga0105248_104276262 252
15 3300025917 Ga0207660_10074025 Ga0207660_100740252 252
16 3300025919 Ga0207657_10133940 Ga0207657_101339402 252
17 3300025941 Ga0207711_10026009 Ga0207711_100260095 252
18 3300026142 Ga0207698_10416538 Ga0207698_104165382 252
19 3300006847 Ga0075431_100530300 Ga0075431_1005303002 254
20 3300049571 Ga0501034_0020406 Ga0501034_0020406_3341_4186 258
21 3300049581 Ga0501047_0029311 Ga0501047_0029311_1144_1989 258
22 3300049823 Ga0501044_0001549 Ga0501044_0001549_24401_25246 258
23 3300005331 Ga0070670_100106512 Ga0070670_1001065122 259
24 3300049593 Ga0501077_0281425 Ga0501077_0281425_67_903 260
25 3300005295 Ga0065707_10169916 Ga0065707_101699162 262
26 3300025927 Ga0207687_10505589 Ga0207687_105055891 262
27 3300034816 Ga0373930_0002141 Ga0373930_0002141_1330_2118 262
28 3300034817 Ga0373948_0003392 Ga0373948_0003392_514_1302 262
29 3300034819 Ga0373958_0001502 Ga0373958_0001502_1236_2024 262
30 3300035088 Ga0373940_0000174 Ga0373940_0000174_501_1289 262
31 3300035090 Ga0373949_0000905 Ga0373949_0000905_3387_4175 262
32 3300035091 Ga0373951_0000634 Ga0373951_0000634_3249_4037 262
33 3300035092 Ga0373952_0001241 Ga0373952_0001241_3241_4029 262
34 3300035112 Ga0373932_0001716 Ga0373932_0001716_2261_3049 262
35 3300035207 Ga0373942_0003430 Ga0373942_0003430_1313_2101 262
36 3300035241 Ga0373961_0002792 Ga0373961_0002792_2700_3488 262
37 3300035242 Ga0373962_0001292 Ga0373962_0001292_4917_5705 262
38 3300035691 Ga0373931_0001780 Ga0373931_0001780_3942_4730 262
39 3300045051 Ga0451576_0010525 Ga0451576_0010525_4288_5076 262
40 3300006871 Ga0075434_100067538 Ga0075434_1000675383 264
41 3300050507 nmdc:mga05p37_1356_c1 nmdc:mga05p37_1356_c1_9476_10270 264
42 3300050515 nmdc:mga0a205_156741_c1 nmdc:mga0a205_156741_c1_1247_2041 264
43 3300005347 Ga0070668_100050095 Ga0070668_1000500952 265
44 3300005353 Ga0070669_100078925 Ga0070669_1000789252 265
45 3300005440 Ga0070705_100184830 Ga0070705_1001848302 265
46 3300005719 Ga0068861_100039505 Ga0068861_1000395053 265
47 3300005844 Ga0068862_100145856 Ga0068862_1001458562 265
48 3300025923 Ga0207681_10036795 Ga0207681_100367952 265
49 3300026118 Ga0207675_100239363 Ga0207675_1002393632 265
50 3300028380 Ga0268265_10010204 Ga0268265_100102046 265
51 3300025919 Ga0207657_10128322 Ga0207657_101283221 266
52 3300061734 Ga0530510_0548509 Ga0530510_0548509_56_862 268
53 3300009093 Ga0105240_10176205 Ga0105240_101762052 269
54 3300009177 Ga0105248_10586956 Ga0105248_105869562 269
55 3300036401 Ga0373937_0401799 Ga0373937_0401799_216_1025 269
56 3300048915 Ga0496112_0610141 Ga0496112_0610141_11_820 269
57 3300050514 nmdc:mga08x19_117453_c1 nmdc:mga08x19_117453_c1_319_1128 269
58 3300005617 Ga0068859_100045897 Ga0068859_1000458972 270
59 3300006931 Ga0097620_100045897 Ga0097620_1000458972 270
60 3300009177 Ga0105248_10765578 Ga0105248_107655782 270
61 3300046517 Ga0495630_0218708 Ga0495630_0218708_158_970 270
62 3300005617 Ga0068859_100455249 Ga0068859_1004552491 271
63 3300005844 Ga0068862_100389119 Ga0068862_1003891192 271
64 3300006871 Ga0075434_100000190 Ga0075434_1000001908 271
65 3300006914 Ga0075436_100000303 Ga0075436_10000030320 271
66 3300006931 Ga0097620_100455297 Ga0097620_1004552971 271
67 3300007076 Ga0075435_100000120 Ga0075435_10000012029 271
68 3300009177 Ga0105248_10250849 Ga0105248_102508492 271
69 3300025912 Ga0207707_10089461 Ga0207707_100894612 271
70 3300035691 Ga0373931_0259705 Ga0373931_0259705_53_895 271
71 3300049572 Ga0501036_0326121 Ga0501036_0326121_20_868 271
72 3300049581 Ga0501047_0132876 Ga0501047_0132876_1116_1964 271
73 3300050512 nmdc:mga0n895_36_c1 nmdc:mga0n895_36_c1_54762_55577 271
74 3300050513 nmdc:mga0rr50_29_c1 nmdc:mga0rr50_29_c1_23916_24731 271
75 3300050514 nmdc:mga08x19_154_c1 nmdc:mga08x19_154_c1_3789_4604 271
76 3300054114 Ga0501084_0129072 Ga0501084_0129072_174_1022 271
77 3300005354 Ga0070675_100000352 Ga0070675_10000035224 273
78 3300005985 Ga0081539_10008972 Ga0081539_100089726 273
79 3300006914 Ga0075436_100010185 Ga0075436_1000101857 273
80 3300009094 Ga0111539_10676269 Ga0111539_106762691 273
81 3300013296 Ga0157374_10385129 Ga0157374_103851292 273
82 3300013308 Ga0157375_11000996 Ga0157375_110009961 273
83 3300025926 Ga0207659_10000348 Ga0207659_100003488 273
84 3300050514 nmdc:mga08x19_97600_c1 nmdc:mga08x19_97600_c1_166_990 273
85 3300042156 Ga0439446_0008477 Ga0439446_0008477_1477_2319 274
86 3300049591 Ga0501075_0428195 Ga0501075_0428195_109_951 274
87 3300061734 Ga0530510_0331121 Ga0530510_0331121_89_931 274
88 3300006914 Ga0075436_100024028 Ga0075436_1000240282 275
89 3300007076 Ga0075435_100012767 Ga0075435_1000127675 275
90 3300007076 Ga0075435_100025422 Ga0075435_1000254221 275
91 3300025922 Ga0207646_10288943 Ga0207646_102889432 275
92 3300025940 Ga0207691_10040155 Ga0207691_100401553 275
93 3300050512 nmdc:mga0n895_44764_c1 nmdc:mga0n895_44764_c1_1403_2233 275
94 3300050513 nmdc:mga0rr50_101555_c1 nmdc:mga0rr50_101555_c1_251_1081 275
95 3300050513 nmdc:mga0rr50_115542_c1 nmdc:mga0rr50_115542_c1_100_993 275
96 3300005328 Ga0070676_10094334 Ga0070676_100943342 276
97 3300005334 Ga0068869_100104881 Ga0068869_1001048812 276
98 3300005445 Ga0070708_100195421 Ga0070708_1001954212 276
99 3300005458 Ga0070681_10022844 Ga0070681_100228446 276
100 3300005459 Ga0068867_100110874 Ga0068867_1001108742 276
101 3300005471 Ga0070698_100485366 Ga0070698_1004853662 276
102 3300005530 Ga0070679_100048600 Ga0070679_1000486002 276
103 3300005549 Ga0070704_100161072 Ga0070704_1001610721 276
104 3300005563 Ga0068855_100668753 Ga0068855_1006687531 276
105 3300005618 Ga0068864_100275169 Ga0068864_1002751692 276
106 3300005842 Ga0068858_100199309 Ga0068858_1001993092 276
107 3300006844 Ga0075428_100649905 Ga0075428_1006499052 276
108 3300009094 Ga0111539_10127850 Ga0111539_101278503 276
109 3300009147 Ga0114129_10001613 Ga0114129_1000161322 276
110 3300009147 Ga0114129_10171494 Ga0114129_101714942 276
111 3300025912 Ga0207707_10046564 Ga0207707_100465641 276
112 3300025917 Ga0207660_10389977 Ga0207660_103899771 276
113 3300025921 Ga0207652_10074392 Ga0207652_100743922 276
114 3300025942 Ga0207689_10089607 Ga0207689_100896072 276
115 3300026035 Ga0207703_10016071 Ga0207703_100160714 276
116 3300026089 Ga0207648_10116106 Ga0207648_101161062 276
117 3300027907 Ga0207428_10360629 Ga0207428_103606292 276
118 3300046537 Ga0495598_0055445 Ga0495598_0055445_133_972 276
119 3300050507 nmdc:mga05p37_145464_c1 nmdc:mga05p37_145464_c1_1896_2732 276
120 3300050507 nmdc:mga05p37_17201_c1 nmdc:mga05p37_17201_c1_488_1321 276
121 3300050508 nmdc:mga09592_171466_c1 nmdc:mga09592_171466_c1_172_1011 276
122 3300050511 nmdc:mga08y16_392699_c1 nmdc:mga08y16_392699_c1_156_995 276
123 3300050511 nmdc:mga08y16_4317_c1 nmdc:mga08y16_4317_c1_1789_2625 276
124 3300005334 Ga0068869_100130657 Ga0068869_1001306572 277
125 3300005353 Ga0070669_100185387 Ga0070669_1001853872 277
126 3300005434 Ga0070709_10277295 Ga0070709_102772951 277
127 3300005441 Ga0070700_100274675 Ga0070700_1002746752 277
128 3300005459 Ga0068867_100290978 Ga0068867_1002909782 277
129 3300005468 Ga0070707_100077326 Ga0070707_1000773262 277
130 3300005545 Ga0070695_100004168 Ga0070695_1000041687 277
131 3300005547 Ga0070693_100096928 Ga0070693_1000969281 277
132 3300005549 Ga0070704_100006888 Ga0070704_1000068886 277
133 3300005549 Ga0070704_100106672 Ga0070704_1001066721 277
134 3300005563 Ga0068855_100428002 Ga0068855_1004280022 277
135 3300005578 Ga0068854_100007839 Ga0068854_1000078396 277
136 3300005842 Ga0068858_100222845 Ga0068858_1002228452 277
137 3300006237 Ga0097621_100010774 Ga0097621_1000107744 277
138 3300006852 Ga0075433_10044627 Ga0075433_100446272 277
139 3300006914 Ga0075436_100058618 Ga0075436_1000586184 277
140 3300006914 Ga0075436_100198124 Ga0075436_1001981242 277
141 3300009093 Ga0105240_10061913 Ga0105240_100619134 277
142 3300009094 Ga0111539_10000892 Ga0111539_1000089215 277
143 3300009094 Ga0111539_10028684 Ga0111539_100286842 277
144 3300009147 Ga0114129_10003868 Ga0114129_100038688 277
145 3300009147 Ga0114129_10107453 Ga0114129_101074533 277
146 3300009177 Ga0105248_10013791 Ga0105248_1001379110 277
147 3300009177 Ga0105248_10027414 Ga0105248_100274143 277
148 3300009177 Ga0105248_10144671 Ga0105248_101446712 277
149 3300025911 Ga0207654_10152919 Ga0207654_101529192 277
150 3300025913 Ga0207695_10086156 Ga0207695_100861562 277
151 3300025913 Ga0207695_10146278 Ga0207695_101462782 277
152 3300025922 Ga0207646_10039255 Ga0207646_100392553 277
153 3300025941 Ga0207711_10061140 Ga0207711_100611402 277
154 3300025942 Ga0207689_10094468 Ga0207689_100944682 277
155 3300025981 Ga0207640_10003243 Ga0207640_100032433 277
156 3300026035 Ga0207703_10130147 Ga0207703_101301472 277
157 3300026075 Ga0207708_10341237 Ga0207708_103412371 277
158 3300026089 Ga0207648_10293788 Ga0207648_102937882 277
159 3300027907 Ga0207428_10003437 Ga0207428_1000343714 277
160 3300032002 Ga0307416_100018242 Ga0307416_1000182425 277
161 3300035115 Ga0373941_0039363 Ga0373941_0039363_169_1020 277
162 3300046681 Ga0495647_0185829 Ga0495647_0185829_24_866 277
163 3300049577 Ga0501041_0206091 Ga0501041_0206091_230_1063 277
164 3300049741 Ga0501079_0116702 Ga0501079_0116702_627_1460 277
165 3300050507 nmdc:mga05p37_68234_c1 nmdc:mga05p37_68234_c1_2227_3069 277
166 3300050511 nmdc:mga08y16_155684_c1 nmdc:mga08y16_155684_c1_1091_1999 277
167 3300050511 nmdc:mga08y16_16606_c1 nmdc:mga08y16_16606_c1_2262_3107 277
168 3300050512 nmdc:mga0n895_557651_c1 nmdc:mga0n895_557651_c1_47_889 277
169 3300050515 nmdc:mga0a205_9579_c1 nmdc:mga0a205_9579_c1_1076_1918 277
170 3300054114 Ga0501084_0226133 Ga0501084_0226133_656_1489 277
171 3300005341 Ga0070691_10006601 Ga0070691_100066013 278
172 3300005353 Ga0070669_100010650 Ga0070669_1000106506 278
173 3300005354 Ga0070675_100238189 Ga0070675_1002381892 278
174 3300005364 Ga0070673_100168453 Ga0070673_1001684532 278
175 3300005438 Ga0070701_10008022 Ga0070701_100080226 278
176 3300005440 Ga0070705_100006785 Ga0070705_1000067853 278
177 3300005440 Ga0070705_100037456 Ga0070705_1000374562 278
178 3300005441 Ga0070700_100012180 Ga0070700_1000121803 278
179 3300005441 Ga0070700_100200681 Ga0070700_1002006812 278
180 3300005444 Ga0070694_100009258 Ga0070694_1000092585 278
181 3300005444 Ga0070694_100105620 Ga0070694_1001056202 278
182 3300005457 Ga0070662_100272591 Ga0070662_1002725912 278
183 3300005545 Ga0070695_100001042 Ga0070695_1000010427 278
184 3300005549 Ga0070704_100209125 Ga0070704_1002091252 278
185 3300005578 Ga0068854_100189165 Ga0068854_1001891652 278
186 3300005615 Ga0070702_100001792 Ga0070702_1000017928 278
187 3300005719 Ga0068861_100066462 Ga0068861_1000664622 278
188 3300005719 Ga0068861_100074021 Ga0068861_1000740212 278
189 3300006852 Ga0075433_10372396 Ga0075433_103723962 278
190 3300009094 Ga0111539_10026099 Ga0111539_100260992 278
191 3300009148 Ga0105243_10012023 Ga0105243_100120234 278
192 3300025315 Ga0207697_10058221 Ga0207697_100582212 278
193 3300025907 Ga0207645_10003113 Ga0207645_100031137 278
194 3300025923 Ga0207681_10012462 Ga0207681_100124626 278
195 3300025925 Ga0207650_10301213 Ga0207650_103012132 278
196 3300025933 Ga0207706_10176318 Ga0207706_101763182 278
197 3300025935 Ga0207709_10008404 Ga0207709_100084043 278
198 3300025960 Ga0207651_10089331 Ga0207651_100893312 278
199 3300026035 Ga0207703_10129400 Ga0207703_101294002 278
200 3300026075 Ga0207708_10009769 Ga0207708_100097695 278
201 3300026075 Ga0207708_10072426 Ga0207708_100724262 278
202 3300026089 Ga0207648_10005095 Ga0207648_1000509510 278
203 3300026118 Ga0207675_100006747 Ga0207675_1000067479 278
204 3300026118 Ga0207675_100082106 Ga0207675_1000821062 278
205 3300027907 Ga0207428_10011820 Ga0207428_100118207 278
206 3300050511 nmdc:mga08y16_3391_c1 nmdc:mga08y16_3391_c1_2114_2965 278
207 3300050515 nmdc:mga0a205_435718_c1 nmdc:mga0a205_435718_c1_147_998 278
208 3300005290 Ga0065712_10069924 Ga0065712_100699242 279
209 3300005295 Ga0065707_10197398 Ga0065707_101973981 279
210 3300005330 Ga0070690_100097613 Ga0070690_1000976132 279
211 3300005331 Ga0070670_100012253 Ga0070670_1000122538 279
212 3300005356 Ga0070674_100048199 Ga0070674_1000481992 279
213 3300005364 Ga0070673_100093213 Ga0070673_1000932132 279
214 3300005435 Ga0070714_100001306 Ga0070714_1000013066 279
215 3300005439 Ga0070711_100074044 Ga0070711_1000740442 279
216 3300005456 Ga0070678_100142965 Ga0070678_1001429652 279
217 3300005543 Ga0070672_100090825 Ga0070672_1000908253 279
218 3300005548 Ga0070665_100640848 Ga0070665_1006408482 279
219 3300005843 Ga0068860_100619336 Ga0068860_1006193362 279
220 3300006028 Ga0070717_10321321 Ga0070717_103213212 279
221 3300006237 Ga0097621_100365532 Ga0097621_1003655322 279
222 3300009093 Ga0105240_10003905 Ga0105240_1000390516 279
223 3300009093 Ga0105240_10665041 Ga0105240_106650412 279
224 3300009101 Ga0105247_10058196 Ga0105247_100581961 279
225 3300009177 Ga0105248_10150138 Ga0105248_101501383 279
226 3300009553 Ga0105249_10193597 Ga0105249_101935972 279
227 3300013296 Ga0157374_10343990 Ga0157374_103439902 279
228 3300013308 Ga0157375_10715715 Ga0157375_107157151 279
229 3300014325 Ga0163163_10027154 Ga0163163_100271545 279
230 3300025315 Ga0207697_10030989 Ga0207697_100309892 279
231 3300025913 Ga0207695_10013989 Ga0207695_100139894 279
232 3300025923 Ga0207681_10267342 Ga0207681_102673422 279
233 3300025925 Ga0207650_10028448 Ga0207650_100284484 279
234 3300025926 Ga0207659_10208474 Ga0207659_102084742 279
235 3300025929 Ga0207664_10047552 Ga0207664_100475525 279
236 3300025937 Ga0207669_10015113 Ga0207669_100151135 279
237 3300025940 Ga0207691_10071807 Ga0207691_100718072 279
238 3300025941 Ga0207711_10167506 Ga0207711_101675062 279
239 3300025941 Ga0207711_10427263 Ga0207711_104272632 279
240 3300025960 Ga0207651_10070854 Ga0207651_100708542 279
241 3300026089 Ga0207648_10205701 Ga0207648_102057012 279
242 3300026121 Ga0207683_10008318 Ga0207683_1000831812 279
243 3300026121 Ga0207683_10056041 Ga0207683_100560414 279
244 3300028379 Ga0268266_10318590 Ga0268266_103185902 279
245 3300028380 Ga0268265_10436163 Ga0268265_104361632 279
246 3300035170 Ga0373943_0065095 Ga0373943_0065095_422_1261 279
247 3300046516 Ga0495628_0167749 Ga0495628_0167749_806_1645 279
248 3300046678 Ga0495599_0159657 Ga0495599_0159657_22_861 279
249 3300048911 Ga0496108_0239280 Ga0496108_0239280_51_890 279
250 3300048912 Ga0496109_0199690 Ga0496109_0199690_773_1612 279
251 3300048912 Ga0496109_0349040 Ga0496109_0349040_34_882 279
252 3300049744 Ga0501083_0075925 Ga0501083_0075925_46_891 279
253 3300050515 nmdc:mga0a205_103863_c1 nmdc:mga0a205_103863_c1_399_1286 279
254 3300053085 Ga0495619_0260094 Ga0495619_0260094_134_979 279

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

3

293

0.76

PF12730

ABC2_membrane_4

ABC-2 family transporter protein

50

224

0.57

Structural Annotation

Top 5 Hits

ID Description Score Start End
7o0z-assembly1.cif.gz_E abc transporter nosfy, nucleotide-free in gdn 0.7081 13 273
7o0z-assembly1.cif.gz_E abc transporter nosfy, nucleotide-free in gdn 0.6988 13 273
7znq-assembly1.cif.gz_y abc transporter complex nosdfyl in gdn 0.6971 13 274
7o0z-assembly1.cif.gz_D abc transporter nosfy, nucleotide-free in gdn 0.6968 14 273
7o16-assembly1.cif.gz_D abc transporter nosdfy, nucleotide-free in lipid nanodisc, r-domain 3 0.6939 13 273
ID Description Score Start End Superfamily
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6401 69 269 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.545 69 269 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.4667 69 269 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.3998 69 269 3.40.1710.10
af_Q8IM26_1_284_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3137 73 271 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A2G4JIQ0-F1-model_v4 ABC transporter permease 0.9251 6 279 GO:0005886
GO:0140359
AF-A0A2G4JIQ0-F1-model_v4 ABC transporter permease 0.9185 6 279 GO:0005886
GO:0140359
AF-A0A2E8E748-F1-model_v4 ABC transporter permease 0.9161 1 279 GO:0005886
GO:0140359
AF-A0A2E8E748-F1-model_v4 ABC transporter permease 0.9129 1 279 GO:0005886
GO:0140359
AF-A0A1F5APS0-F1-model_v4 ABC transporter permease 0.9057 9 279 GO:0016020

Feature Viewer

pLDDT pTM Quality
80.57 0.81 High
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Predicted Structure (AlphaFold2)

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