F365250

General Info

Members Datasets Scaffolds Average Seq Length
254 144 254 407

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_206127_c1|nmdc:mga0n895_206127_c1_153_1511
Length 452
Sequence VDHALISPPERASSAWDDVIEPPGHDDSLVAAASVEHERSKPLNTVTDTVLGTHSEVGKLHTVMVHRPDLAHERLSPTNAHELLFDDVIWVRRARQEHDAFVDLMRERGTEVLLLHELLAETLEDAEARQWLLSRRVRPEEVTVMFTEPLKDWLTEMPAEELATRLTGGITVLELPGEIKSAIGPALGPTDFVLPPLPNQLFTRDTSAWLYGGVSLNPMFWPARQLETLNVEAIYRFHPRFRDAGFQIWFGGADHDWGTARMEGGDMMPVGDGVVLIGMGERSTAKAVSILARTMFEAGAARLVLGAQMPRDRAAMHLDTVFTFCNHDIATLYEPVVDQIRPILFTPGGPAGVQAEVSERAFLDEVKDALGLERLKLVPTAGDEFEAERTQWDDGNNVVALEPGVVVAYERNEATNAKLSKAGIEVLAIAGQELGRGRGGGHCMTCPIVREA

Samples

Sample ID Description Type Environment
1 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
32 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
33 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
47 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
59 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
60 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
61 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
62 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
69 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
70 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
71 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
72 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
73 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
74 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
84 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
85 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
98 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
103 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.57
Nodule 0
Rhizoplane 21.65
Rhizosphere 75.59
Stem 0
Stem Tuber 0
Unclassified 1.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055531_10009814 3300003794 Bacteria 4851
2 Ga0070683_100007615 3300005329 Bacteria 9159
3 Ga0070683_100010374 3300005329 Bacteria 8012
4 Ga0070680_100008816 3300005336 Bacteria 7738
5 Ga0070674_100099565 3300005356 Bacteria 2115
6 Ga0070674_100244456 3300005356 Bacteria 1407
7 Ga0070713_100063702 3300005436 Bacteria 3093
8 Ga0070678_100004673 3300005456 Bacteria 7792
9 Ga0070678_100008519 3300005456 Bacteria 6144
10 Ga0070681_10001982 3300005458 Bacteria 18507
11 Ga0070698_100004222 3300005471 Bacteria 15793
12 Ga0070679_100014285 3300005530 Bacteria 7626
13 Ga0070684_100005549 3300005535 Bacteria 9682
14 Ga0070684_100017698 3300005535 Bacteria 5857
15 Ga0070684_100029500 3300005535 Bacteria 4650
16 Ga0070684_100269055 3300005535 Bacteria 1560
17 Ga0070704_100237511 3300005549 Bacteria 1490
18 Ga0070664_100036618 3300005564 Bacteria 4123
19 Ga0068856_100057611 3300005614 Bacteria 3836
20 Ga0068856_100116485 3300005614 Bacteria 2672
21 Ga0070702_100026196 3300005615 Bacteria 3131
22 Ga0068866_10047537 3300005718 Bacteria 2164
23 Ga0068860_100131275 3300005843 Bacteria 2404
24 Ga0070716_100062633 3300006173 Bacteria 2157
25 Ga0097621_100151180 3300006237 Bacteria 1991
26 Ga0075433_10275608 3300006852 Bacteria 1491
27 Ga0075434_100011604 3300006871 Bacteria 8319
28 Ga0075436_100194664 3300006914 Bacteria 1435
29 Ga0111539_10015085 3300009094 Bacteria 9630
30 Ga0105245_10020308 3300009098 Bacteria 5824
31 Ga0114129_10017381 3300009147 Bacteria 10242
32 Ga0114129_10713168 3300009147 Bacteria 1288
33 Ga0105243_10026610 3300009148 Bacteria 4429
34 Ga0105243_10186287 3300009148 Bacteria 1809
35 Ga0105248_10054396 3300009177 Bacteria 4489
36 Ga0105248_10071112 3300009177 Bacteria 3908
37 Ga0157374_10117250 3300013296 Bacteria 2566
38 Ga0157378_10034603 3300013297 Bacteria 4467
39 Ga0157372_10080305 3300013307 Bacteria 3689
40 Ga0157375_10044296 3300013308 Bacteria 4322
41 Ga0157375_10151892 3300013308 Bacteria 2452
42 Ga0157376_10095190 3300014969 Bacteria 2589
43 Ga0209758_1011934 3300025297 Bacteria 4944
44 Ga0209257_1000303 3300025304 Bacteria 107862
45 Ga0207642_10005991 3300025899 Bacteria 4013
46 Ga0207707_10006727 3300025912 Bacteria 10037
47 Ga0207652_10255400 3300025921 Bacteria 1581
48 Ga0207687_10013450 3300025927 Bacteria 5343
49 Ga0207687_10035162 3300025927 Bacteria 3407
50 Ga0207644_10076866 3300025931 Bacteria 2457
51 Ga0207709_10046415 3300025935 Bacteria 2636
52 Ga0207704_10097074 3300025938 Bacteria 1953
53 Ga0207704_10125597 3300025938 Bacteria 1766
54 Ga0207661_10000856 3300025944 Bacteria 19971
55 Ga0207661_10014416 3300025944 Bacteria 5794
56 Ga0207679_10030837 3300025945 Bacteria 3748
57 Ga0207702_10043420 3300026078 Bacteria 3774
58 Ga0207702_10066881 3300026078 Bacteria 3082
59 Ga0207702_10111778 3300026078 Bacteria 2430
60 Ga0207674_10010863 3300026116 Bacteria 10261
61 Ga0207683_10000142 3300026121 Bacteria 59460
62 Ga0207683_10004299 3300026121 Bacteria 12302
63 Ga0207683_10316429 3300026121 Bacteria 1429
64 Ga0265334_10061752 3300028573 Bacteria 1411
65 Ga0265318_10021901 3300028577 Bacteria 2561
66 Ga0265338_10034157 3300028800 Bacteria 4920
67 Ga0265330_10009700 3300031235 Bacteria 4564
68 Ga0265331_10001962 3300031250 Bacteria 14377
69 Ga0265313_10000021 3300031595 Bacteria 144949
70 Ga0265313_10004543 3300031595 Bacteria 10583
71 Ga0307508_10070995 3300031616 Bacteria 3056
72 Ga0265314_10005751 3300031711 Bacteria 11124
73 Ga0265314_10135635 3300031711 Bacteria 1528
74 Ga0265342_10012521 3300031712 Bacteria 5741
75 Ga0265342_10127262 3300031712 Bacteria 1429
76 Ga0316576_10009397 3300031727 Bacteria 6305
77 Ga0307416_100118683 3300032002 Bacteria 2351
78 Ga0307415_100010323 3300032126 Bacteria 5284
79 Ga0373926_0009016 3300035083 Bacteria 3327
80 Ga0373936_0002695 3300035113 Bacteria 6633
81 Ga0373945_0017213 3300035116 Bacteria 2446
82 Ga0373943_0005133 3300035170 Bacteria 5893
83 Ga0373935_0015955 3300035692 Bacteria 4546
84 Ga0373947_0000346 3300035725 Bacteria 26182
85 Ga0395899_0008795 3300037312 Bacteria 7769
86 Ga0395899_0025866 3300037312 Bacteria 4430
87 Ga0395899_0065146 3300037312 Bacteria 2678
88 Ga0395900_0030225 3300037418 Bacteria 5561
89 Ga0395900_0031016 3300037418 Bacteria 5491
90 Ga0395900_0042531 3300037418 Bacteria 4682
91 Ga0395900_0154067 3300037418 Bacteria 2348
92 Ga0395900_0218061 3300037418 Bacteria 1924
93 Ga0395898_0011221 3300037466 Bacteria 9327
94 Ga0395898_0016306 3300037466 Bacteria 7604
95 Ga0395898_0022828 3300037466 Bacteria 6329
96 Ga0395898_0039387 3300037466 Bacteria 4678
97 Ga0395898_0045498 3300037466 Bacteria 4314
98 Ga0395898_0076613 3300037466 Bacteria 3229
99 Ga0395898_0105121 3300037466 Bacteria 2707
100 Ga0395898_0232832 3300037466 Bacteria 1757
101 Ga0395905_0001778 3300037471 Bacteria 25004
102 Ga0395905_0012505 3300037471 Bacteria 8170
103 Ga0395905_0029858 3300037471 Bacteria 5138
104 Ga0395905_0031282 3300037471 Bacteria 5011
105 Ga0395905_0055996 3300037471 Bacteria 3690
106 Ga0395905_0071871 3300037471 Bacteria 3243
107 Ga0395905_0076969 3300037471 Bacteria 3126
108 Ga0395905_0357607 3300037471 Bacteria 1353
109 Ga0395901_0034240 3300038443 Bacteria 5245
110 Ga0395901_0042294 3300038443 Bacteria 4723
111 Ga0395901_0097482 3300038443 Bacteria 3082
112 Ga0395901_0194164 3300038443 Bacteria 2129
113 Ga0395901_0201066 3300038443 Bacteria 2088
114 Ga0395901_0257655 3300038443 Bacteria 1816
115 Ga0451793_1904380 3300041452 Bacteria 2438
116 Ga0451800_0949005 3300041459 Bacteria 2573
117 Ga0451849_0416000 3300041505 Bacteria 3270
118 Ga0451853_2141807 3300041512 Bacteria 1531
119 Ga0439451_005493 3300042009 Bacteria 2586
120 Ga0450907_009213 3300042146 Bacteria 1637
121 Ga0451576_0347059 3300045051 Bacteria 1554
122 Ga0495603_0045018 3300046455 Bacteria 2633
123 Ga0495641_0013262 3300046461 Bacteria 4542
124 Ga0495651_0029815 3300046462 Bacteria 4254
125 Ga0495651_0072879 3300046462 Bacteria 2607
126 Ga0495653_0114773 3300046463 Bacteria 1929
127 Ga0495582_0072432 3300046473 Bacteria 1907
128 Ga0495639_0088481 3300046475 Bacteria 1450
129 Ga0495662_0012588 3300046476 Bacteria 4126
130 Ga0495585_0140926 3300046492 Bacteria 1263
131 Ga0495607_0041085 3300046501 Bacteria 2749
132 Ga0495608_0020666 3300046511 Bacteria 4522
133 Ga0495628_0050182 3300046516 Bacteria 3301
134 Ga0495630_0006926 3300046517 Bacteria 8078
135 Ga0495630_0007238 3300046517 Bacteria 7917
136 Ga0495630_0012105 3300046517 Bacteria 6255
137 Ga0495652_0024344 3300046529 Bacteria 5360
138 Ga0495652_0052394 3300046529 Bacteria 3481
139 Ga0495652_0066163 3300046529 Bacteria 3034
140 Ga0495665_0045264 3300046531 Bacteria 2338
141 Ga0495640_0017814 3300046533 Bacteria 5283
142 Ga0495640_0082926 3300046533 Bacteria 2128
143 Ga0495667_0038847 3300046559 Bacteria 3168
144 Ga0495667_0059662 3300046559 Bacteria 2503
145 Ga0495656_0094079 3300046615 Bacteria 1375
146 Ga0495656_0097613 3300046615 Bacteria 1354
147 Ga0495635_0010378 3300046663 Bacteria 6514
148 Ga0495657_0065941 3300046675 Bacteria 2380
149 Ga0495657_0079420 3300046675 Bacteria 2125
150 Ga0495658_0001239 3300046683 Bacteria 13404
151 Ga0495613_0024512 3300046689 Bacteria 4495
152 Ga0495600_0012545 3300046809 Bacteria 5302
153 Ga0495600_0034800 3300046809 Bacteria 3271
154 Ga0495581_0035229 3300047315 Bacteria 2896
155 Ga0495674_0003826 3300047319 Bacteria 14612
156 Ga0495674_0058521 3300047319 Bacteria 3368
157 Ga0495676_0033075 3300047321 Bacteria 4359
158 Ga0495680_0001796 3300047322 Bacteria 22697
159 Ga0495680_0023463 3300047322 Bacteria 5130
160 Ga0495677_0070357 3300047445 Bacteria 1304
161 Ga0495684_0006600 3300047471 Bacteria 8999
162 Ga0495684_0015203 3300047471 Bacteria 5928
163 Ga0496100_0030167 3300048903 Bacteria 3361
164 Ga0496100_0033718 3300048903 Bacteria 3206
165 Ga0496100_0046343 3300048903 Bacteria 2795
166 Ga0496100_0046450 3300048903 Bacteria 2792
167 Ga0496100_0079131 3300048903 Bacteria 2214
168 Ga0496101_0001547 3300048904 Bacteria 13788
169 Ga0496101_0023434 3300048904 Bacteria 4265
170 Ga0496101_0043871 3300048904 Bacteria 3197
171 Ga0496102_0001980 3300048905 Bacteria 17696
172 Ga0496102_0041547 3300048905 Bacteria 4164
173 Ga0496102_0043615 3300048905 Bacteria 4068
174 Ga0496103_0009850 3300048906 Bacteria 5658
175 Ga0496103_0071859 3300048906 Bacteria 2166
176 Ga0496103_0075340 3300048906 Bacteria 2116
177 Ga0496104_0001009 3300048907 Bacteria 24141
178 Ga0496104_0001813 3300048907 Bacteria 18528
179 Ga0496104_0031681 3300048907 Bacteria 4918
180 Ga0496104_0294538 3300048907 Bacteria 1535
181 Ga0496104_0334077 3300048907 Bacteria 1428
182 Ga0496105_0022343 3300048908 Bacteria 5123
183 Ga0496105_0052921 3300048908 Bacteria 3353
184 Ga0496105_0079665 3300048908 Bacteria 2705
185 Ga0496106_0037870 3300048909 Bacteria 3608
186 Ga0496106_0065673 3300048909 Bacteria 2762
187 Ga0496106_0066455 3300048909 Bacteria 2746
188 Ga0496106_0102405 3300048909 Bacteria 2221
189 Ga0496106_0181787 3300048909 Bacteria 1669
190 Ga0496107_0004076 3300048910 Bacteria 9839
191 Ga0496107_0031567 3300048910 Bacteria 3781
192 Ga0496107_0058335 3300048910 Bacteria 2791
193 Ga0496108_0003842 3300048911 Bacteria 12050
194 Ga0496108_0004554 3300048911 Bacteria 11169
195 Ga0496108_0064761 3300048911 Bacteria 3080
196 Ga0496109_0001080 3300048912 Bacteria 22643
197 Ga0496109_0002568 3300048912 Bacteria 15206
198 Ga0496109_0029123 3300048912 Bacteria 4943
199 Ga0496109_0096512 3300048912 Bacteria 2739
200 Ga0496109_0114729 3300048912 Bacteria 2506
201 Ga0496110_0000414 3300048913 Bacteria 29042
202 Ga0496110_0206749 3300048913 Bacteria 1784
203 Ga0496110_0293309 3300048913 Bacteria 1481
204 Ga0496111_0001014 3300048914 Bacteria 15411
205 Ga0496111_0001251 3300048914 Bacteria 14216
206 Ga0496111_0053036 3300048914 Bacteria 2929
207 Ga0496111_0073064 3300048914 Bacteria 2497
208 Ga0496112_0163654 3300048915 Bacteria 2191
209 Ga0496113_0087874 3300048916 Bacteria 2391
210 Ga0496114_0001826 3300048917 Bacteria 16140
211 Ga0496114_0026879 3300048917 Bacteria 4714
212 Ga0496114_0061800 3300048917 Bacteria 3134
213 Ga0496114_0125270 3300048917 Bacteria 2214
214 Ga0496115_0083392 3300048918 Bacteria 2605
215 Ga0496115_0103315 3300048918 Bacteria 2338
216 Ga0501031_0056080 3300049568 Bacteria 2567
217 Ga0501037_0095886 3300049573 Bacteria 2144
218 Ga0501038_0280133 3300049574 Bacteria 1313
219 Ga0501040_0040169 3300049576 Bacteria 3183
220 Ga0501040_0149896 3300049576 Bacteria 1645
221 Ga0501041_0008053 3300049577 Bacteria 6201
222 Ga0501041_0048571 3300049577 Bacteria 2585
223 Ga0501042_0021084 3300049578 Bacteria 4538
224 Ga0501042_0212342 3300049578 Bacteria 1396
225 Ga0501047_0064534 3300049581 Bacteria 3532
226 Ga0501071_0010621 3300049587 Bacteria 6176
227 Ga0501072_0006432 3300049588 Bacteria 8950
228 Ga0501072_0154455 3300049588 Bacteria 1830
229 Ga0501075_0041207 3300049591 Bacteria 3460
230 Ga0501076_0088521 3300049592 Bacteria 2488
231 Ga0501076_0260042 3300049592 Bacteria 1421
232 Ga0501079_0160384 3300049741 Bacteria 1753
233 Ga0501079_0229115 3300049741 Bacteria 1451
234 Ga0501080_0247777 3300049742 Bacteria 1625
235 Ga0501080_0248503 3300049742 Bacteria 1622
236 Ga0501081_0025674 3300049743 Bacteria 3966
237 Ga0501081_0090033 3300049743 Bacteria 2156
238 Ga0501081_0095214 3300049743 Bacteria 2099
239 Ga0501035_0067496 3300049822 Bacteria 3173
240 Ga0501045_0018513 3300049824 Bacteria 4955
241 nmdc:mga05p37_337973_c1 3300050507 Bacteria 1776
242 nmdc:mga05p37_34303_c1 3300050507 Bacteria 6215
243 nmdc:mga0n895_13682_c1 3300050512 Bacteria 7336
244 nmdc:mga0n895_206127_c1 3300050512 Bacteria 1997
245 nmdc:mga0n895_22012_c1 3300050512 Bacteria 5972
246 nmdc:mga0n895_60311_c1 3300050512 Bacteria 3744
247 nmdc:mga08x19_61439_c1 3300050514 Bacteria 2435
248 Ga0495601_0051018 3300053077 Bacteria 2611
249 Ga0495595_0001860 3300053084 Bacteria 8191
250 Ga0495595_0034765 3300053084 Bacteria 2281
251 Ga0495619_0005503 3300053085 Bacteria 8033
252 Ga0500642_0001809 3300053130 Bacteria 6172
253 Ga0501084_0069895 3300054114 Bacteria 2940
254 Ga0501082_0178428 3300060353 Bacteria 1847

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300028573 Ga0265334_10061752 Ga0265334_100617522 346
2 3300046511 Ga0495608_0020666 Ga0495608_0020666_2934_4031 365
3 3300009177 Ga0105248_10071112 Ga0105248_100711122 375
4 3300037466 Ga0395898_0022828 Ga0395898_0022828_3538_4773 387
5 3300038443 Ga0395901_0097482 Ga0395901_0097482_1405_2640 387
6 3300037418 Ga0395900_0154067 Ga0395900_0154067_1140_2306 388
7 3300046529 Ga0495652_0052394 Ga0495652_0052394_996_2231 388
8 3300006914 Ga0075436_100194664 Ga0075436_1001946641 389
9 3300009147 Ga0114129_10713168 Ga0114129_107131681 389
10 3300037312 Ga0395899_0025866 Ga0395899_0025866_765_1934 389
11 3300037471 Ga0395905_0055996 Ga0395905_0055996_488_1657 389
12 3300041505 Ga0451849_0416000 Ga0451849_0416000_2074_3243 389
13 3300046492 Ga0495585_0140926 Ga0495585_0140926_16_1185 389
14 3300046501 Ga0495607_0041085 Ga0495607_0041085_1315_2484 389
15 3300046615 Ga0495656_0094079 Ga0495656_0094079_189_1358 389
16 3300047445 Ga0495677_0070357 Ga0495677_0070357_123_1292 389
17 3300048904 Ga0496101_0043871 Ga0496101_0043871_1369_2538 389
18 3300048905 Ga0496102_0041547 Ga0496102_0041547_1827_2996 389
19 3300048906 Ga0496103_0071859 Ga0496103_0071859_221_1390 389
20 3300048909 Ga0496106_0037870 Ga0496106_0037870_2125_3294 389
21 3300048910 Ga0496107_0031567 Ga0496107_0031567_2086_3255 389
22 3300049588 Ga0501072_0154455 Ga0501072_0154455_621_1790 389
23 3300049592 Ga0501076_0260042 Ga0501076_0260042_220_1389 389
24 3300049742 Ga0501080_0248503 Ga0501080_0248503_405_1574 389
25 3300046615 Ga0495656_0097613 Ga0495656_0097613_130_1302 390
26 3300049577 Ga0501041_0048571 Ga0501041_0048571_344_1516 390
27 3300049578 Ga0501042_0212342 Ga0501042_0212342_183_1355 390
28 3300049741 Ga0501079_0160384 Ga0501079_0160384_432_1604 390
29 3300049743 Ga0501081_0090033 Ga0501081_0090033_25_1197 390
30 3300054114 Ga0501084_0069895 Ga0501084_0069895_1067_2239 390
31 3300060353 Ga0501082_0178428 Ga0501082_0178428_416_1588 390
32 3300005535 Ga0070684_100017698 Ga0070684_1000176985 395
33 3300025921 Ga0207652_10255400 Ga0207652_102554001 395
34 3300050507 nmdc:mga05p37_337973_c1 nmdc:mga05p37_337973_c1_345_1577 396
35 3300005329 Ga0070683_100007615 Ga0070683_1000076152 397
36 3300046455 Ga0495603_0045018 Ga0495603_0045018_724_1956 401
37 3300005471 Ga0070698_100004222 Ga0070698_1000042224 403
38 3300037471 Ga0395905_0001778 Ga0395905_0001778_8166_9380 404
39 3300031250 Ga0265331_10001962 Ga0265331_100019624 405
40 3300031595 Ga0265313_10000021 Ga0265313_100000212 405
41 3300031711 Ga0265314_10135635 Ga0265314_101356352 405
42 3300031712 Ga0265342_10127262 Ga0265342_101272621 405
43 3300037471 Ga0395905_0029858 Ga0395905_0029858_1145_2362 405
44 3300037471 Ga0395905_0031282 Ga0395905_0031282_802_2034 405
45 3300031727 Ga0316576_10009397 Ga0316576_100093971 406
46 3300049581 Ga0501047_0064534 Ga0501047_0064534_1183_2403 406
47 3300048918 Ga0496115_0083392 Ga0496115_0083392_1178_2401 407
48 3300050512 nmdc:mga0n895_22012_c1 nmdc:mga0n895_22012_c1_1985_3214 409
49 3300005329 Ga0070683_100010374 Ga0070683_1000103742 410
50 3300005336 Ga0070680_100008816 Ga0070680_1000088162 410
51 3300005356 Ga0070674_100099565 Ga0070674_1000995651 410
52 3300005356 Ga0070674_100244456 Ga0070674_1002444561 410
53 3300005436 Ga0070713_100063702 Ga0070713_1000637023 410
54 3300005456 Ga0070678_100004673 Ga0070678_1000046732 410
55 3300005456 Ga0070678_100008519 Ga0070678_1000085195 410
56 3300005458 Ga0070681_10001982 Ga0070681_100019829 410
57 3300005530 Ga0070679_100014285 Ga0070679_1000142854 410
58 3300005535 Ga0070684_100005549 Ga0070684_10000554910 410
59 3300005535 Ga0070684_100029500 Ga0070684_1000295004 410
60 3300005535 Ga0070684_100269055 Ga0070684_1002690552 410
61 3300005549 Ga0070704_100237511 Ga0070704_1002375112 410
62 3300005564 Ga0070664_100036618 Ga0070664_1000366181 410
63 3300005614 Ga0068856_100057611 Ga0068856_1000576113 410
64 3300005614 Ga0068856_100116485 Ga0068856_1001164852 410
65 3300005615 Ga0070702_100026196 Ga0070702_1000261962 410
66 3300005718 Ga0068866_10047537 Ga0068866_100475372 410
67 3300005843 Ga0068860_100131275 Ga0068860_1001312752 410
68 3300006173 Ga0070716_100062633 Ga0070716_1000626332 410
69 3300006237 Ga0097621_100151180 Ga0097621_1001511802 410
70 3300006852 Ga0075433_10275608 Ga0075433_102756081 410
71 3300006871 Ga0075434_100011604 Ga0075434_1000116045 410
72 3300009094 Ga0111539_10015085 Ga0111539_100150852 410
73 3300009098 Ga0105245_10020308 Ga0105245_100203083 410
74 3300009147 Ga0114129_10017381 Ga0114129_100173819 410
75 3300009148 Ga0105243_10026610 Ga0105243_100266104 410
76 3300009148 Ga0105243_10186287 Ga0105243_101862872 410
77 3300009177 Ga0105248_10054396 Ga0105248_100543963 410
78 3300013296 Ga0157374_10117250 Ga0157374_101172502 410
79 3300013297 Ga0157378_10034603 Ga0157378_100346033 410
80 3300013307 Ga0157372_10080305 Ga0157372_100803052 410
81 3300013308 Ga0157375_10044296 Ga0157375_100442963 410
82 3300013308 Ga0157375_10151892 Ga0157375_101518923 410
83 3300014969 Ga0157376_10095190 Ga0157376_100951902 410
84 3300025899 Ga0207642_10005991 Ga0207642_100059912 410
85 3300025912 Ga0207707_10006727 Ga0207707_100067276 410
86 3300025927 Ga0207687_10013450 Ga0207687_100134502 410
87 3300025927 Ga0207687_10035162 Ga0207687_100351623 410
88 3300025931 Ga0207644_10076866 Ga0207644_100768662 410
89 3300025935 Ga0207709_10046415 Ga0207709_100464152 410
90 3300025938 Ga0207704_10097074 Ga0207704_100970741 410
91 3300025938 Ga0207704_10125597 Ga0207704_101255971 410
92 3300025944 Ga0207661_10000856 Ga0207661_100008566 410
93 3300025944 Ga0207661_10014416 Ga0207661_100144162 410
94 3300025945 Ga0207679_10030837 Ga0207679_100308371 410
95 3300026078 Ga0207702_10043420 Ga0207702_100434203 410
96 3300026078 Ga0207702_10066881 Ga0207702_100668812 410
97 3300026078 Ga0207702_10111778 Ga0207702_101117782 410
98 3300026116 Ga0207674_10010863 Ga0207674_1001086311 410
99 3300026121 Ga0207683_10000142 Ga0207683_1000014255 410
100 3300026121 Ga0207683_10004299 Ga0207683_100042992 410
101 3300026121 Ga0207683_10316429 Ga0207683_103164291 410
102 3300032002 Ga0307416_100118683 Ga0307416_1001186831 410
103 3300032126 Ga0307415_100010323 Ga0307415_1000103236 410
104 3300035083 Ga0373926_0009016 Ga0373926_0009016_101_1333 410
105 3300035113 Ga0373936_0002695 Ga0373936_0002695_2598_3830 410
106 3300035116 Ga0373945_0017213 Ga0373945_0017213_902_2134 410
107 3300035170 Ga0373943_0005133 Ga0373943_0005133_51_1283 410
108 3300035692 Ga0373935_0015955 Ga0373935_0015955_2234_3466 410
109 3300035725 Ga0373947_0000346 Ga0373947_0000346_17210_18442 410
110 3300037312 Ga0395899_0008795 Ga0395899_0008795_5453_6685 410
111 3300037312 Ga0395899_0065146 Ga0395899_0065146_431_1663 410
112 3300037418 Ga0395900_0030225 Ga0395900_0030225_3268_4500 410
113 3300037418 Ga0395900_0031016 Ga0395900_0031016_3931_5163 410
114 3300037418 Ga0395900_0042531 Ga0395900_0042531_1361_2593 410
115 3300037418 Ga0395900_0218061 Ga0395900_0218061_534_1766 410
116 3300037466 Ga0395898_0011221 Ga0395898_0011221_7774_9006 410
117 3300037466 Ga0395898_0016306 Ga0395898_0016306_2732_3964 410
118 3300037466 Ga0395898_0039387 Ga0395898_0039387_2029_3261 410
119 3300037466 Ga0395898_0045498 Ga0395898_0045498_180_1412 410
120 3300037466 Ga0395898_0076613 Ga0395898_0076613_1123_2355 410
121 3300037466 Ga0395898_0105121 Ga0395898_0105121_1307_2539 410
122 3300037466 Ga0395898_0232832 Ga0395898_0232832_407_1639 410
123 3300037471 Ga0395905_0012505 Ga0395905_0012505_3415_4647 410
124 3300037471 Ga0395905_0071871 Ga0395905_0071871_958_2190 410
125 3300037471 Ga0395905_0076969 Ga0395905_0076969_1026_2258 410
126 3300038443 Ga0395901_0034240 Ga0395901_0034240_842_2074 410
127 3300038443 Ga0395901_0042294 Ga0395901_0042294_2185_3417 410
128 3300038443 Ga0395901_0194164 Ga0395901_0194164_256_1488 410
129 3300038443 Ga0395901_0201066 Ga0395901_0201066_621_1853 410
130 3300038443 Ga0395901_0257655 Ga0395901_0257655_396_1631 410
131 3300041452 Ga0451793_1904380 Ga0451793_1904380_848_2080 410
132 3300041512 Ga0451853_2141807 Ga0451853_2141807_255_1487 410
133 3300042009 Ga0439451_005493 Ga0439451_005493_947_2179 410
134 3300042146 Ga0450907_009213 Ga0450907_009213_75_1307 410
135 3300045051 Ga0451576_0347059 Ga0451576_0347059_139_1371 410
136 3300046461 Ga0495641_0013262 Ga0495641_0013262_2261_3493 410
137 3300046462 Ga0495651_0029815 Ga0495651_0029815_216_1448 410
138 3300046462 Ga0495651_0072879 Ga0495651_0072879_921_2153 410
139 3300046463 Ga0495653_0114773 Ga0495653_0114773_531_1763 410
140 3300046473 Ga0495582_0072432 Ga0495582_0072432_469_1701 410
141 3300046475 Ga0495639_0088481 Ga0495639_0088481_160_1392 410
142 3300046476 Ga0495662_0012588 Ga0495662_0012588_2015_3247 410
143 3300046516 Ga0495628_0050182 Ga0495628_0050182_800_2032 410
144 3300046517 Ga0495630_0006926 Ga0495630_0006926_748_1980 410
145 3300046517 Ga0495630_0007238 Ga0495630_0007238_3969_5201 410
146 3300046517 Ga0495630_0012105 Ga0495630_0012105_2390_3622 410
147 3300046529 Ga0495652_0024344 Ga0495652_0024344_2005_3237 410
148 3300046529 Ga0495652_0066163 Ga0495652_0066163_243_1475 410
149 3300046531 Ga0495665_0045264 Ga0495665_0045264_575_1807 410
150 3300046533 Ga0495640_0017814 Ga0495640_0017814_709_1941 410
151 3300046533 Ga0495640_0082926 Ga0495640_0082926_540_1772 410
152 3300046559 Ga0495667_0038847 Ga0495667_0038847_1836_3068 410
153 3300046559 Ga0495667_0059662 Ga0495667_0059662_108_1340 410
154 3300046663 Ga0495635_0010378 Ga0495635_0010378_2880_4112 410
155 3300046675 Ga0495657_0065941 Ga0495657_0065941_1037_2269 410
156 3300046675 Ga0495657_0079420 Ga0495657_0079420_570_1802 410
157 3300046683 Ga0495658_0001239 Ga0495658_0001239_2353_3585 410
158 3300046689 Ga0495613_0024512 Ga0495613_0024512_1443_2675 410
159 3300046809 Ga0495600_0012545 Ga0495600_0012545_171_1403 410
160 3300046809 Ga0495600_0034800 Ga0495600_0034800_374_1606 410
161 3300047315 Ga0495581_0035229 Ga0495581_0035229_195_1427 410
162 3300047319 Ga0495674_0003826 Ga0495674_0003826_5498_6730 410
163 3300047319 Ga0495674_0058521 Ga0495674_0058521_778_2010 410
164 3300047321 Ga0495676_0033075 Ga0495676_0033075_2481_3713 410
165 3300047322 Ga0495680_0001796 Ga0495680_0001796_4338_5570 410
166 3300047322 Ga0495680_0023463 Ga0495680_0023463_1062_2294 410
167 3300047471 Ga0495684_0006600 Ga0495684_0006600_3985_5217 410
168 3300047471 Ga0495684_0015203 Ga0495684_0015203_2997_4229 410
169 3300048903 Ga0496100_0030167 Ga0496100_0030167_258_1490 410
170 3300048903 Ga0496100_0033718 Ga0496100_0033718_1932_3164 410
171 3300048903 Ga0496100_0046343 Ga0496100_0046343_991_2223 410
172 3300048903 Ga0496100_0046450 Ga0496100_0046450_1539_2771 410
173 3300048903 Ga0496100_0079131 Ga0496100_0079131_802_2034 410
174 3300048904 Ga0496101_0001547 Ga0496101_0001547_545_1777 410
175 3300048904 Ga0496101_0023434 Ga0496101_0023434_1524_2756 410
176 3300048905 Ga0496102_0001980 Ga0496102_0001980_9823_11055 410
177 3300048905 Ga0496102_0043615 Ga0496102_0043615_2151_3383 410
178 3300048906 Ga0496103_0009850 Ga0496103_0009850_3102_4334 410
179 3300048906 Ga0496103_0075340 Ga0496103_0075340_27_1259 410
180 3300048907 Ga0496104_0001009 Ga0496104_0001009_14949_16181 410
181 3300048907 Ga0496104_0001813 Ga0496104_0001813_14054_15286 410
182 3300048907 Ga0496104_0031681 Ga0496104_0031681_1480_2712 410
183 3300048907 Ga0496104_0294538 Ga0496104_0294538_106_1338 410
184 3300048907 Ga0496104_0334077 Ga0496104_0334077_107_1339 410
185 3300048908 Ga0496105_0022343 Ga0496105_0022343_177_1409 410
186 3300048908 Ga0496105_0052921 Ga0496105_0052921_1312_2544 410
187 3300048908 Ga0496105_0079665 Ga0496105_0079665_971_2203 410
188 3300048909 Ga0496106_0065673 Ga0496106_0065673_179_1411 410
189 3300048909 Ga0496106_0066455 Ga0496106_0066455_906_2138 410
190 3300048909 Ga0496106_0102405 Ga0496106_0102405_568_1800 410
191 3300048909 Ga0496106_0181787 Ga0496106_0181787_273_1505 410
192 3300048910 Ga0496107_0004076 Ga0496107_0004076_4941_6173 410
193 3300048910 Ga0496107_0058335 Ga0496107_0058335_116_1348 410
194 3300048911 Ga0496108_0003842 Ga0496108_0003842_985_2217 410
195 3300048911 Ga0496108_0004554 Ga0496108_0004554_9593_10825 410
196 3300048911 Ga0496108_0064761 Ga0496108_0064761_482_1714 410
197 3300048912 Ga0496109_0001080 Ga0496109_0001080_2746_3978 410
198 3300048912 Ga0496109_0002568 Ga0496109_0002568_10535_11767 410
199 3300048912 Ga0496109_0029123 Ga0496109_0029123_618_1850 410
200 3300048912 Ga0496109_0096512 Ga0496109_0096512_1355_2587 410
201 3300048912 Ga0496109_0114729 Ga0496109_0114729_703_1935 410
202 3300048913 Ga0496110_0000414 Ga0496110_0000414_2675_3907 410
203 3300048913 Ga0496110_0206749 Ga0496110_0206749_337_1572 410
204 3300048913 Ga0496110_0293309 Ga0496110_0293309_151_1383 410
205 3300048914 Ga0496111_0001014 Ga0496111_0001014_5160_6392 410
206 3300048914 Ga0496111_0001251 Ga0496111_0001251_9533_10765 410
207 3300048914 Ga0496111_0053036 Ga0496111_0053036_1140_2372 410
208 3300048914 Ga0496111_0073064 Ga0496111_0073064_949_2181 410
209 3300048916 Ga0496113_0087874 Ga0496113_0087874_933_2165 410
210 3300048917 Ga0496114_0001826 Ga0496114_0001826_3425_4657 410
211 3300048917 Ga0496114_0026879 Ga0496114_0026879_2722_3954 410
212 3300048917 Ga0496114_0061800 Ga0496114_0061800_829_2061 410
213 3300048917 Ga0496114_0125270 Ga0496114_0125270_91_1323 410
214 3300048918 Ga0496115_0103315 Ga0496115_0103315_203_1435 410
215 3300049568 Ga0501031_0056080 Ga0501031_0056080_534_1766 410
216 3300049573 Ga0501037_0095886 Ga0501037_0095886_587_1855 410
217 3300049574 Ga0501038_0280133 Ga0501038_0280133_59_1291 410
218 3300049576 Ga0501040_0040169 Ga0501040_0040169_1532_2764 410
219 3300049576 Ga0501040_0149896 Ga0501040_0149896_248_1480 410
220 3300049577 Ga0501041_0008053 Ga0501041_0008053_4202_5434 410
221 3300049578 Ga0501042_0021084 Ga0501042_0021084_876_2108 410
222 3300049587 Ga0501071_0010621 Ga0501071_0010621_228_1460 410
223 3300049588 Ga0501072_0006432 Ga0501072_0006432_7547_8779 410
224 3300049591 Ga0501075_0041207 Ga0501075_0041207_653_1885 410
225 3300049592 Ga0501076_0088521 Ga0501076_0088521_1228_2460 410
226 3300049741 Ga0501079_0229115 Ga0501079_0229115_138_1370 410
227 3300049742 Ga0501080_0247777 Ga0501080_0247777_110_1378 410
228 3300049743 Ga0501081_0025674 Ga0501081_0025674_370_1602 410
229 3300049743 Ga0501081_0095214 Ga0501081_0095214_230_1462 410
230 3300049822 Ga0501035_0067496 Ga0501035_0067496_637_1869 410
231 3300049824 Ga0501045_0018513 Ga0501045_0018513_1082_2314 410
232 3300050507 nmdc:mga05p37_34303_c1 nmdc:mga05p37_34303_c1_2973_4205 410
233 3300050512 nmdc:mga0n895_13682_c1 nmdc:mga0n895_13682_c1_3494_4726 410
234 3300050512 nmdc:mga0n895_206127_c1 nmdc:mga0n895_206127_c1_153_1511 410
235 3300050512 nmdc:mga0n895_60311_c1 nmdc:mga0n895_60311_c1_2139_3371 410
236 3300050514 nmdc:mga08x19_61439_c1 nmdc:mga08x19_61439_c1_556_1914 410
237 3300053077 Ga0495601_0051018 Ga0495601_0051018_1211_2464 410
238 3300053084 Ga0495595_0001860 Ga0495595_0001860_6456_7688 410
239 3300053084 Ga0495595_0034765 Ga0495595_0034765_452_1684 410
240 3300053085 Ga0495619_0005503 Ga0495619_0005503_3970_5202 410
241 3300037471 Ga0395905_0357607 Ga0395905_0357607_105_1343 411
242 3300041459 Ga0451800_0949005 Ga0451800_0949005_1317_2552 411
243 3300048915 Ga0496112_0163654 Ga0496112_0163654_832_2070 411
244 3300028577 Ga0265318_10021901 Ga0265318_100219012 412
245 3300028800 Ga0265338_10034157 Ga0265338_100341573 412
246 3300031235 Ga0265330_10009700 Ga0265330_100097002 412
247 3300031595 Ga0265313_10004543 Ga0265313_100045439 412
248 3300031711 Ga0265314_10005751 Ga0265314_100057515 412
249 3300031712 Ga0265342_10012521 Ga0265342_100125212 412
250 3300003794 Ga0055531_10009814 Ga0055531_100098143 413
251 3300025297 Ga0209758_1011934 Ga0209758_10119342 413
252 3300025304 Ga0209257_1000303 Ga0209257_1000303104 413
253 3300031616 Ga0307508_10070995 Ga0307508_100709952 413
254 3300053130 Ga0500642_0001809 Ga0500642_0001809_1687_2934 413

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02274

ADI

Arginine deiminase

81

450

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rxx-assembly1.cif.gz_B structure of arginine deiminase 0.9335 9 413
2aci-assembly2.cif.gz_D structure of d166a arginine deiminase 0.9287 9 413
1rxx-assembly2.cif.gz_C structure of arginine deiminase 0.9286 9 413
1rxx-assembly2.cif.gz_D structure of arginine deiminase 0.9273 9 413
2aci-assembly2.cif.gz_A structure of d166a arginine deiminase 0.925 9 413
ID Description Score Start End Superfamily
2aafB01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9336 9 413 3.75.10.10
2aafB01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9224 9 413 3.75.10.10
1rxxB02 Mainly Alpha;Orthogonal Bundle;Pentein;Arginine deiminase 0.9183 76 137 1.10.3930.10
4bofA01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9075 10 411 3.75.10.10
4bofA01 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9021 10 411 3.75.10.10
ID Description Score Start End GO Terms
AF-A0A359EZV5-F1-model_v4 Arginine deiminase (EC 3.5.3.6) 0.9524 275 336 GO:0016990
AF-W4TEK2-F1-model_v4 deleted 0.9522 178 277
AF-A0A7Y9WHT3-F1-model_v4 Arginine deiminase (ADI) (EC 3.5.3.6) (Arginine dihydrolase) (AD) 0.9521 9 413 GO:0005737
GO:0016990
GO:0019546
GO:0019547
AF-A0A512HME4-F1-model_v4 arginine deiminase (EC 3.5.3.6) 0.9517 60 413 GO:0005737
GO:0016990
GO:0019546
AF-C4LA78-F1-model_v4 Arginine deiminase (ADI) (EC 3.5.3.6) (Arginine dihydrolase) (AD) 0.9515 9 413 GO:0005737
GO:0016990
GO:0019546
GO:0019547

Feature Viewer

pLDDT pTM Quality
86.73 0.88 High
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Predicted Structure (AlphaFold2)

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