F365740

General Info

Members Datasets Scaffolds Average Seq Length
255 204 510 530

Family's Representative Sequence

Representative Sequence 3300025909|Ga0207705_10034060|Ga0207705_100340602
Length 555
Sequence MSDARPPEGARPESVRRREIPMHHAAQVCNLSQLLRQTAALHPDRAGLIQGEQRWSWREIDTRVDAMVAALRSLGVRKGDRLLVQSRNSLSMFESCWVAFRLGAVWVPVNFRLTPPEVAYLGASSGAVAMLVDDGFEAHVAAVREAAPALKHVIGMGAQWESLVDLHRDAEPFEETVEADDPLWFFYTSGTTGRPKAGTLTHGQMAFIVTNHLADLIPGTTEHDVSIAVAPLSHGAGIHALLNVARGAATVLLPSEKLEPAVFWALVERHRVSNVFTVPTIVKMLVEHPSVDQHDHSSLRYVIYAGAPMYRADQQRALRALGPVLVQYFGLGEVTGCITVLTPAMHSADDDAPNANVGSCGRPRTGMEVAILDADLRRVPTGQVGEICCRGPGVFAGYHDNPEATAKALRGGWFHTGDLGRVDERGMLYITGRESDMYISGGSNVYPREVEEVLLTHPGVAEVAVLGVPDEKWGEVGVAVVVAREGVACDAAALLAHLDGRCARYRWPRHIFFWAALPKSGYGKVTKKEVREQLFARGELWETTELVQARESSPA

Samples

Sample ID Description Type Environment
1 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
42 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
43 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
48 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
49 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
76 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
79 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
84 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
85 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
96 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
97 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
98 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
99 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
100 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
101 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
102 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
103 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
121 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
124 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
125 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
126 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
129 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
130 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
131 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
132 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
136 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
137 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
138 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
139 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
144 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
162 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
163 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
164 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
165 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
166 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
167 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
168 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
169 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
170 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
171 2508501050 Microvirga lupini Lut6 Isolate Nodule
172 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
173 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
174 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
175 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
176 2643221658 Variovorax sp. Root411 Isolate Unclassified
177 2643221733 Bosea sp. Root381 Isolate Unclassified
178 2738541277 Variovorax sp. GV051 Isolate Unclassified
179 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
180 2738543019 Variovorax sp. GV040 Isolate Unclassified
181 2765235841 Pseudomonas putida AA7 Isolate Unclassified
182 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
183 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
184 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
185 2842747753 Variovorax sp. R-72060 Isolate Unclassified
186 2855730933 Achromobacter sp. HZ28 Isolate Nodule
187 2855767633 Achromobacter sp. HZ34 Isolate Nodule
188 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
189 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
190 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
191 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
192 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
193 2904456579 Variovorax sp. 2002 Isolate Unclassified
194 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
195 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
196 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
197 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
198 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
199 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
200 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
201 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
202 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
203 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
204 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.71
Metatranscriptomes 0.78
Isolates 14.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.69
Nodule 3.53
Rhizoplane 0.39
Rhizosphere 64.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207705_10034060 3300025909 Bacteria 3641
2 JGI25156J39149_1000225 3300002705 Bacteria 38896
3 JGI25156J39149_1000737 3300002705 Bacteria 17326
4 JGI25154J39366_1000721 3300002738 Bacteria 14946
5 JGI25157J39369_1000491 3300002741 Bacteria 24512
6 rootH1_10036174 3300003316 Bacteria 5373
7 rootL2_10081425 3300003322 Bacteria 4928
8 rootH1_10018867 3300003323 Bacteria 4310
9 Ga0006562J51391_1042881 3300003578 Bacteria 3300
10 Ga0006562J51391_1042886 3300003578 Bacteria 2670
11 Ga0055539_1000279 3300003752 Bacteria 29490
12 Ga0055533_1000025 3300003756 Bacteria 332208
13 Ga0055525_1001099 3300003759 Bacteria 6705
14 Ga0055535_1000122 3300003761 Bacteria 83657
15 Ga0055526_1000364 3300003771 Bacteria 36604
16 Ga0055536_1000804 3300003781 Bacteria 20760
17 Ga0055530_10005554 3300003791 Bacteria 5948
18 Ga0055540_1000949 3300003792 Bacteria 18865
19 Ga0055531_10000428 3300003794 Bacteria 39914
20 Ga0070658_10007277 3300005327 Bacteria 8936
21 Ga0070678_100019584 3300005456 Bacteria 4418
22 Ga0070681_10059478 3300005458 Bacteria 3801
23 Ga0070679_100067835 3300005530 Bacteria 3558
24 Ga0068853_100079455 3300005539 Bacteria 2868
25 Ga0068855_100005495 3300005563 Bacteria 15465
26 Ga0068855_100006139 3300005563 Bacteria 14646
27 Ga0068855_100119109 3300005563 Bacteria 3023
28 Ga0068857_100052268 3300005577 Bacteria 3625
29 Ga0068852_100016569 3300005616 Bacteria 5754
30 Ga0068864_100021390 3300005618 Bacteria 5420
31 Ga0070712_100044267 3300006175 Bacteria 3069
32 Ga0075366_10099220 3300006195 Bacteria 1747
33 Ga0075370_10002502 3300006353 Bacteria 8534
34 Ga0075370_10056323 3300006353 Bacteria 2234
35 Ga0075428_100001488 3300006844 Bacteria 25069
36 Ga0105240_10046756 3300009093 Bacteria 5481
37 Ga0105240_10139550 3300009093 Bacteria 2899
38 Ga0105245_10049215 3300009098 Bacteria 3773
39 Ga0105237_10004597 3300009545 Bacteria 15930
40 Ga0105238_10108911 3300009551 Bacteria 2752
41 Ga0105239_10007581 3300010375 Bacteria 12437
42 Ga0105239_10048699 3300010375 Bacteria 4647
43 Ga0157369_10006869 3300013105 Bacteria 13129
44 Ga0157374_10038992 3300013296 Bacteria 4370
45 Ga0157372_10001327 3300013307 Bacteria 26764
46 Ga0182008_10007730 3300014497 Bacteria 5919
47 Ga0182008_10015834 3300014497 Bacteria 3927
48 Ga0157379_10227667 3300014968 Bacteria 1690
49 Ga0182006_1012739 3300015261 Bacteria 3673
50 Ga0213872_10007270 3300021361 Bacteria 5468
51 Ga0209674_100007 3300025226 Bacteria 1077082
52 Ga0209563_100052 3300025230 Bacteria 334307
53 Ga0207427_100516 3300025231 Bacteria 20429
54 Ga0209258_100284 3300025242 Bacteria 83713
55 Ga0209258_101590 3300025242 Bacteria 7517
56 Ga0209646_1000245 3300025246 Bacteria 55317
57 Ga0209026_1000021 3300025250 Bacteria 375165
58 Ga0209677_100015 3300025253 Bacteria 532137
59 Ga0209677_100842 3300025253 Bacteria 15200
60 Ga0209759_1000382 3300025256 Bacteria 55345
61 Ga0209455_1000207 3300025272 Bacteria 83713
62 Ga0209675_1000452 3300025291 Bacteria 31792
63 Ga0209676_1000172 3300025292 Bacteria 153664
64 Ga0209025_1000038 3300025294 Bacteria 380508
65 Ga0209025_1000079 3300025294 Bacteria 270973
66 Ga0209564_1000015 3300025295 Bacteria 615324
67 Ga0209564_1000031 3300025295 Bacteria 494703
68 Ga0209050_1000565 3300025298 Bacteria 60237
69 Ga0209256_1000062 3300025299 Bacteria 253433
70 Ga0209051_1000278 3300025303 Bacteria 83769
71 Ga0209051_1000355 3300025303 Bacteria 67873
72 Ga0209051_1006517 3300025303 Bacteria 6561
73 Ga0209257_1000072 3300025304 Bacteria 332791
74 Ga0207705_10000892 3300025909 Bacteria 24450
75 Ga0207705_10041661 3300025909 Bacteria 3294
76 Ga0207707_10021088 3300025912 Bacteria 5694
77 Ga0207695_10006017 3300025913 Bacteria 15855
78 Ga0207693_10004419 3300025915 Bacteria 11886
79 Ga0207652_10054346 3300025921 Bacteria 3442
80 Ga0207667_10006647 3300025949 Bacteria 13974
81 Ga0207667_10036216 3300025949 Bacteria 5290
82 Ga0207667_10082340 3300025949 Bacteria 3334
83 Ga0207651_10010597 3300025960 Bacteria 5117
84 Ga0207640_10050003 3300025981 Bacteria 2710
85 Ga0207702_10012655 3300026078 Bacteria 7022
86 Ga0207641_10109085 3300026088 Bacteria 2451
87 Ga0207676_10038851 3300026095 Bacteria 3636
88 Ga0207674_10077009 3300026116 Bacteria 3342
89 Ga0207698_10115084 3300026142 Bacteria 2264
90 Ga0265336_10000048 3300028666 Bacteria 121572
91 Ga0307515_10007276 3300028794 Bacteria 21919
92 Ga0307515_10014013 3300028794 Bacteria 14919
93 Ga0307515_10032223 3300028794 Bacteria 8697
94 Ga0265324_10004171 3300029957 Bacteria 6611
95 Ga0265330_10000157 3300031235 Bacteria 54427
96 Ga0265332_10000001 3300031238 Bacteria 863783
97 Ga0265327_10000194 3300031251 Bacteria 129264
98 Ga0307408_100006056 3300031548 Bacteria 8045
99 Ga0307514_10022240 3300031649 Bacteria 5157
100 Ga0265314_10000436 3300031711 Bacteria 55744
101 Ga0307516_10001757 3300031730 Bacteria 29831
102 Ga0307414_10005089 3300032004 Bacteria 7207
103 Ga0307414_10068505 3300032004 Bacteria 2547
104 Ga0373934_0005936 3300035086 Bacteria 4518
105 Ga0373943_0000219 3300035170 Bacteria 23269
106 Ga0373946_0009159 3300035171 Bacteria 3644
107 Ga0373927_0001854 3300035695 Bacteria 15665
108 Ga0373947_0002000 3300035725 Bacteria 12444
109 Ga0373947_0016077 3300035725 Bacteria 4300
110 Ga0373925_0000990 3300037068 Bacteria 25795
111 Ga0373925_0015001 3300037068 Bacteria 5601
112 Ga0395899_0000496 3300037312 Bacteria 43823
113 Ga0395899_0007978 3300037312 Bacteria 8153
114 Ga0395900_0003346 3300037418 Bacteria 17317
115 Ga0395900_0018321 3300037418 Bacteria 7143
116 Ga0395898_0001365 3300037466 Bacteria 35163
117 Ga0395905_0113240 3300037471 Bacteria 2548
118 Ga0395901_0000323 3300038443 Bacteria 59167
119 Ga0395901_0001423 3300038443 Bacteria 24941
120 Ga0436361_0383070 3300039447 Bacteria 38538
121 Ga0436361_0784147 3300039447 Bacteria 11641
122 Ga0439447_012893 3300041407 Bacteria 2388
123 Ga0439465_0013671 3300041413 Bacteria 2528
124 Ga0439431_0006949 3300041997 Bacteria 2517
125 Ga0439445_0002123 3300042004 Bacteria 4385
126 Ga0439432_001912 3300042006 Bacteria 7861
127 Ga0439449_0005201 3300042007 Bacteria 4992
128 Ga0439452_004631 3300042010 Bacteria 4567
129 Ga0450902_000021 3300042137 Bacteria 14340
130 Ga0450901_000439 3300042533 Bacteria 4940
131 Ga0466969_0002670 3300044656 Bacteria 9532
132 Ga0466973_0019539 3300044659 Bacteria 6459
133 Ga0466965_0008462 3300044683 Bacteria 4762
134 Ga0466966_0001813 3300044684 Bacteria 13855
135 Ga0466963_0006791 3300044694 Bacteria 6804
136 Ga0466964_0007885 3300044706 Bacteria 3988
137 Ga0466971_0024532 3300044719 Bacteria 2690
138 Ga0466971_0034520 3300044719 Bacteria 2266
139 Ga0466968_0019008 3300044735 Bacteria 2761
140 Ga0466957_0000233 3300044842 Bacteria 26263
141 Ga0466959_0022731 3300045049 Bacteria 4635
142 Ga0466958_0017219 3300045836 Bacteria 4173
143 Ga0466958_0030347 3300045836 Bacteria 3210
144 Ga0495627_000045 3300046453 Bacteria 180228
145 Ga0495627_001678 3300046453 Bacteria 12186
146 Ga0495629_0047911 3300046459 Bacteria 2997
147 Ga0495638_0000859 3300046460 Bacteria 31634
148 Ga0495638_0006269 3300046460 Bacteria 8680
149 Ga0495653_0003516 3300046463 Bacteria 12617
150 Ga0495653_0023271 3300046463 Bacteria 5009
151 Ga0495650_0001679 3300046471 Bacteria 20456
152 Ga0495650_0010542 3300046471 Bacteria 5148
153 Ga0495650_0020250 3300046471 Bacteria 3248
154 Ga0495580_0027580 3300046472 Bacteria 4131
155 Ga0495662_0006610 3300046476 Bacteria 5787
156 Ga0495664_0001063 3300046477 Bacteria 14192
157 Ga0495585_0000705 3300046492 Bacteria 30104
158 Ga0495607_0000071 3300046501 Bacteria 100353
159 Ga0495607_0003917 3300046501 Bacteria 11215
160 Ga0495607_0007636 3300046501 Bacteria 7450
161 Ga0495607_0021785 3300046501 Bacteria 4029
162 Ga0495583_0000062 3300046506 Bacteria 195151
163 Ga0495606_0002144 3300046507 Bacteria 23794
164 Ga0495606_0016341 3300046507 Bacteria 5665
165 Ga0495630_0019612 3300046517 Bacteria 4973
166 Ga0495631_0000246 3300046518 Bacteria 37428
167 Ga0495631_0007238 3300046518 Bacteria 5658
168 Ga0495632_0001277 3300046519 Bacteria 21324
169 Ga0495632_0011120 3300046519 Bacteria 5271
170 Ga0495632_0016982 3300046519 Bacteria 4033
171 Ga0495654_0001191 3300046530 Bacteria 18496
172 Ga0495665_0030143 3300046531 Bacteria 2903
173 Ga0495640_0007753 3300046533 Bacteria 8448
174 Ga0495625_0002010 3300046660 Bacteria 22929
175 Ga0495625_0002424 3300046660 Bacteria 20193
176 Ga0495625_0020128 3300046660 Bacteria 5157
177 Ga0495635_0001639 3300046663 Bacteria 15096
178 Ga0495635_0025573 3300046663 Bacteria 4113
179 Ga0495661_0000027 3300046665 Bacteria 184297
180 Ga0495624_0000757 3300046690 Bacteria 25443
181 Ga0495671_0001800 3300046692 Bacteria 13874
182 Ga0495649_0000247 3300046694 Bacteria 47906
183 Ga0495649_0001917 3300046694 Bacteria 15151
184 Ga0495589_0006643 3300046794 Bacteria 6094
185 Ga0495674_0031117 3300047319 Bacteria 4849
186 Ga0495672_0007601 3300047320 Bacteria 8132
187 Ga0495676_0063137 3300047321 Bacteria 2888
188 Ga0495683_0000016 3300047323 Bacteria 191396
189 Ga0495683_0011145 3300047323 Bacteria 4739
190 Ga0495681_0005036 3300047470 Bacteria 8905
191 Ga0495684_0006008 3300047471 Bacteria 9436
192 Ga0495686_0077472 3300047472 Bacteria 2035
193 Ga0496110_0048454 3300048913 Bacteria 3725
194 Ga0496119_0000011 3300048922 Bacteria 438315
195 Ga0496120_0000329 3300048923 Bacteria 78994
196 Ga0496122_0036170 3300048925 Bacteria 4000
197 Ga0496124_0020544 3300048927 Bacteria 6098
198 Ga0496126_0027052 3300048929 Bacteria 5487
199 Ga0495678_000825 3300049459 Bacteria 27794
200 Ga0495678_007112 3300049459 Bacteria 5850
201 Ga0501043_0000002 3300049579 Bacteria 351081
202 Ga0501046_0000008 3300049580 Bacteria 351167
203 Ga0501047_0000003 3300049581 Bacteria 508375
204 Ga0501047_0000249 3300049581 Bacteria 63758
205 Ga0501047_0000610 3300049581 Bacteria 37914
206 Ga0501048_0000394 3300049582 Bacteria 30397
207 Ga0501044_0047892 3300049823 Bacteria 4420
208 Ga0501045_0055119 3300049824 Bacteria 2907
209 nmdc:mga03683_3663_c1 3300050489 Bacteria 4999
210 nmdc:mga0sz30_13138_c1 3300050516 Bacteria 3235
211 Ga0500635_0000046 3300053080 Bacteria 84743
212 Ga0495619_0000950 3300053085 Bacteria 18988
213 Ga0500607_004571 3300053121 Bacteria 9460
214 Ga0500618_002340 3300053125 Bacteria 7243
215 Ga0500655_000041 3300053133 Bacteria 35332
216 Ga0500586_005648 3300053145 Bacteria 3183
217 Ga0500639_012158 3300053163 Bacteria 4517
218 Ga0466962_0001519 3300061719 Bacteria 10829
219 2501077559 2501025502 Bacteria 9641094
220 2508726763 2508501050 Bacteria 9633614
221 2509127799 2508501125 Bacteria 7208311
222 2511091372 2510917013 Bacteria 9951648
223 2643775629 2643221551 Bacteria 3750538
224 2643794076 2643221555 Bacteria 3749717
225 2644325432 2643221658 Bacteria 6064537
226 2644728575 2643221733 Bacteria 5690728
227 2738722313 2738541277 Bacteria 7458140
228 2738945192 2738541317 Bacteria 5340176
229 2739282677 2738543019 Bacteria 7459457
230 2765584903 2765235841 Bacteria 6137024
231 2842326400 2842324504 Bacteria 9364110
232 2842351082 2842348783 Bacteria 9002918
233 2842455712 2842454564 Bacteria 8730687
234 2842751670 2842747753 Bacteria 5578255
235 2855734679 2855730933 Bacteria 7047938
236 2855770269 2855767633 Bacteria 7049357
237 2857578470 2857576091 Bacteria 5465855
238 2881414490 2881412998 Bacteria 6492157
239 2894025900 2894023352 Bacteria 5167372
240 2899275570 2899275550 Bacteria 3958688
241 2904453738 2904449895 Bacteria 6927402
242 2904458958 2904456579 Bacteria 6819253
243 2904541934 2904541872 Bacteria 8915136
244 2904542543 2904541872 Bacteria 8915136
245 2913309818 2913308742 Bacteria 5350706
246 2919157160 2919155634 Bacteria 4860545
247 2928525810 2928521798 Bacteria 4960112
248 2929167223 2929160207 Bacteria 9075316
249 2929167785 2929160207 Bacteria 9075316
250 2945911969 2945909444 Bacteria 7065066
251 2945972609 2945972063 Bacteria 6086495
252 2954012101 2954011201 Bacteria 4762601
253 642596658 642555112 Bacteria 8676562
254 8054568874 8054563764 Bacteria 5592885
255 8055228837 8055225921 Bacteria 3341787
256 Ga0207705_10034060
257 JGI25156J39149_1000225
258 JGI25156J39149_1000737
259 JGI25154J39366_1000721
260 JGI25157J39369_1000491
261 rootH1_10036174
262 rootL2_10081425
263 rootH1_10018867
264 Ga0006562J51391_1042881
265 Ga0006562J51391_1042886
266 Ga0055539_1000279
267 Ga0055533_1000025
268 Ga0055525_1001099
269 Ga0055535_1000122
270 Ga0055526_1000364
271 Ga0055536_1000804
272 Ga0055530_10005554
273 Ga0055540_1000949
274 Ga0055531_10000428
275 Ga0070658_10007277
276 Ga0070678_100019584
277 Ga0070681_10059478
278 Ga0070679_100067835
279 Ga0068853_100079455
280 Ga0068855_100005495
281 Ga0068855_100006139
282 Ga0068855_100119109
283 Ga0068857_100052268
284 Ga0068852_100016569
285 Ga0068864_100021390
286 Ga0070712_100044267
287 Ga0075366_10099220
288 Ga0075370_10002502
289 Ga0075370_10056323
290 Ga0075428_100001488
291 Ga0105240_10046756
292 Ga0105240_10139550
293 Ga0105245_10049215
294 Ga0105237_10004597
295 Ga0105238_10108911
296 Ga0105239_10007581
297 Ga0105239_10048699
298 Ga0157369_10006869
299 Ga0157374_10038992
300 Ga0157372_10001327
301 Ga0182008_10007730
302 Ga0182008_10015834
303 Ga0157379_10227667
304 Ga0182006_1012739
305 Ga0213872_10007270
306 Ga0209674_100007
307 Ga0209563_100052
308 Ga0207427_100516
309 Ga0209258_100284
310 Ga0209258_101590
311 Ga0209646_1000245
312 Ga0209026_1000021
313 Ga0209677_100015
314 Ga0209677_100842
315 Ga0209759_1000382
316 Ga0209455_1000207
317 Ga0209675_1000452
318 Ga0209676_1000172
319 Ga0209025_1000038
320 Ga0209025_1000079
321 Ga0209564_1000015
322 Ga0209564_1000031
323 Ga0209050_1000565
324 Ga0209256_1000062
325 Ga0209051_1000278
326 Ga0209051_1000355
327 Ga0209051_1006517
328 Ga0209257_1000072
329 Ga0207705_10000892
330 Ga0207705_10041661
331 Ga0207707_10021088
332 Ga0207695_10006017
333 Ga0207693_10004419
334 Ga0207652_10054346
335 Ga0207667_10006647
336 Ga0207667_10036216
337 Ga0207667_10082340
338 Ga0207651_10010597
339 Ga0207640_10050003
340 Ga0207702_10012655
341 Ga0207641_10109085
342 Ga0207676_10038851
343 Ga0207674_10077009
344 Ga0207698_10115084
345 Ga0265336_10000048
346 Ga0307515_10007276
347 Ga0307515_10014013
348 Ga0307515_10032223
349 Ga0265324_10004171
350 Ga0265330_10000157
351 Ga0265332_10000001
352 Ga0265327_10000194
353 Ga0307408_100006056
354 Ga0307514_10022240
355 Ga0265314_10000436
356 Ga0307516_10001757
357 Ga0307414_10005089
358 Ga0307414_10068505
359 Ga0373934_0005936
360 Ga0373943_0000219
361 Ga0373946_0009159
362 Ga0373927_0001854
363 Ga0373947_0002000
364 Ga0373947_0016077
365 Ga0373925_0000990
366 Ga0373925_0015001
367 Ga0395899_0000496
368 Ga0395899_0007978
369 Ga0395900_0003346
370 Ga0395900_0018321
371 Ga0395898_0001365
372 Ga0395905_0113240
373 Ga0395901_0000323
374 Ga0395901_0001423
375 Ga0436361_0383070
376 Ga0436361_0784147
377 Ga0439447_012893
378 Ga0439465_0013671
379 Ga0439431_0006949
380 Ga0439445_0002123
381 Ga0439432_001912
382 Ga0439449_0005201
383 Ga0439452_004631
384 Ga0450902_000021
385 Ga0450901_000439
386 Ga0466969_0002670
387 Ga0466973_0019539
388 Ga0466965_0008462
389 Ga0466966_0001813
390 Ga0466963_0006791
391 Ga0466964_0007885
392 Ga0466971_0024532
393 Ga0466971_0034520
394 Ga0466968_0019008
395 Ga0466957_0000233
396 Ga0466959_0022731
397 Ga0466958_0017219
398 Ga0466958_0030347
399 Ga0495627_000045
400 Ga0495627_001678
401 Ga0495629_0047911
402 Ga0495638_0000859
403 Ga0495638_0006269
404 Ga0495653_0003516
405 Ga0495653_0023271
406 Ga0495650_0001679
407 Ga0495650_0010542
408 Ga0495650_0020250
409 Ga0495580_0027580
410 Ga0495662_0006610
411 Ga0495664_0001063
412 Ga0495585_0000705
413 Ga0495607_0000071
414 Ga0495607_0003917
415 Ga0495607_0007636
416 Ga0495607_0021785
417 Ga0495583_0000062
418 Ga0495606_0002144
419 Ga0495606_0016341
420 Ga0495630_0019612
421 Ga0495631_0000246
422 Ga0495631_0007238
423 Ga0495632_0001277
424 Ga0495632_0011120
425 Ga0495632_0016982
426 Ga0495654_0001191
427 Ga0495665_0030143
428 Ga0495640_0007753
429 Ga0495625_0002010
430 Ga0495625_0002424
431 Ga0495625_0020128
432 Ga0495635_0001639
433 Ga0495635_0025573
434 Ga0495661_0000027
435 Ga0495624_0000757
436 Ga0495671_0001800
437 Ga0495649_0000247
438 Ga0495649_0001917
439 Ga0495589_0006643
440 Ga0495674_0031117
441 Ga0495672_0007601
442 Ga0495676_0063137
443 Ga0495683_0000016
444 Ga0495683_0011145
445 Ga0495681_0005036
446 Ga0495684_0006008
447 Ga0495686_0077472
448 Ga0496110_0048454
449 Ga0496119_0000011
450 Ga0496120_0000329
451 Ga0496122_0036170
452 Ga0496124_0020544
453 Ga0496126_0027052
454 Ga0495678_000825
455 Ga0495678_007112
456 Ga0501043_0000002
457 Ga0501046_0000008
458 Ga0501047_0000003
459 Ga0501047_0000249
460 Ga0501047_0000610
461 Ga0501048_0000394
462 Ga0501044_0047892
463 Ga0501045_0055119
464 nmdc:mga03683_3663_c1
465 nmdc:mga0sz30_13138_c1
466 Ga0500635_0000046
467 Ga0495619_0000950
468 Ga0500607_004571
469 Ga0500618_002340
470 Ga0500655_000041
471 Ga0500586_005648
472 Ga0500639_012158
473 Ga0466962_0001519
474 2501077559
475 2508726763
476 2509127799
477 2511091372
478 2643775629
479 2643794076
480 2644325432
481 2644728575
482 2738722313
483 2738945192
484 2739282677
485 2765584903
486 2842326400
487 2842351082
488 2842455712
489 2842751670
490 2855734679
491 2855770269
492 2857578470
493 2881414490
494 2894025900
495 2899275570
496 2904453738
497 2904458958
498 2904541934
499 2904542543
500 2913309818
501 2919157160
502 2928525810
503 2929167223
504 2929167785
505 2945911969
506 2945972609
507 2954012101
508 642596658
509 8054568874
510 8055228837

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

449

524

0.97

PF00501

AMP-binding

AMP-binding enzyme

35

399

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6eby-assembly2.cif.gz_D crystal structure of the mbth-like protein fsck bound to the interface forming region of fsch adenylation domain from thermobifida fusca 0.858 314 380
6m2t-assembly1.cif.gz_A the crystal structure of benzoate coenzyme a ligase double mutant (h333a/i334a) in complex with 2-methyl-thiazole-5 carboxylate-amp 0.8507 26 481
6sq8-assembly5.cif.gz_E structure of amide bond synthetase mcba from marinactinospora thermotolerans 0.8488 28 480
3b7w-assembly1.cif.gz_A crystal structure of human acyl-coa synthetase medium-chain family member 2a, with l64p mutation 0.8445 28 480
4rm3-assembly2.cif.gz_B crystal structure of a benzoate coenzyme a ligase with 2-furoic acid 0.8434 26 479
ID Description Score Start End Superfamily
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9562 383 480 3.30.300.30
af_Q9LQS1_441_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9518 383 480 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9498 384 477 3.30.300.30
5buqA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9495 383 463 3.30.300.30
af_Q2G1H9_722_797_2.30.38.10 Mainly Beta;Roll;Luciferase; domain 3;Luciferase; Domain 3 0.9462 308 378 2.30.38.10
ID Description Score Start End GO Terms
AF-A0A2D9F669-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9679 386 480 GO:0006631
GO:0031956
AF-A0A380BDY4-F1-model_v4 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.9448 408 480 GO:0004467
GO:0044550
AF-X0Y3T5-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9447 299 378
AF-X0Y3T5-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9334 299 378
AF-A0A3D2E6U1-F1-model_v4 deleted 0.9299 394 482

Map