F366122

General Info

Members Datasets Scaffolds Average Seq Length
255 193 237 395

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|640427133|640489428
Length 449
Sequence VRLRATAYAPHLRPPPPGGGGCRWHGTRRGWNDCQSQRPAAGGTKNKKPRGTRSMNTKFWCLATIGLAATFSLPLPALAAIEEGKLVVWINGDKGYKGLAEVGKRFTAETGIPVEVAHPDSATDKFQQAAATGNGPDIFIWAHDRIGEWAKSGLLTPVTPSAETKSGIADFSWQAVTYDNKLWGYPISVETIGLIYNKALVDTPPKSFDDVLALNETLAPQGKRAILWDYNNTYFTWPLLSAKGGYVFEQTDGGYNVKSTGVNNAGAKAGAKVLRELIDKGVMPKGADYSVAEAAFNKGDSAMMISGPWAWSNIEKSGIDFGVAPIPAIDGEAGKPFVGVAAALLNAASPNKDLAVEFLENYLLEVDGLKTVNADVPLGAVANTAYMEELSSNPHIKATFENAQMGQPMPNVPEMGAFWSSMAAALTNITSGRQDVDAALDDAAKRITR

Samples

Sample ID Description Type Environment
1 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
2 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
3 2643221585 Pelomonas sp. Root662 Isolate Unclassified
4 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
5 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
6 2643221656 Pelomonas sp. Root405 Isolate Unclassified
7 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
8 2738541337 Pelomonas sp. BT06 Isolate Unclassified
9 2831864461 Roseateles noduli HZ7 Isolate Nodule
10 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
11 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
12 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
13 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
14 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
15 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
16 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
17 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
18 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
19 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
20 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
21 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
22 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
23 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
24 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
25 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
26 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
27 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
28 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
29 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
30 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
33 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
34 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
35 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
36 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
37 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
38 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
39 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
40 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
41 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
42 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
61 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
62 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
63 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
64 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
69 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
70 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
72 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
99 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
105 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
109 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
110 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
111 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
112 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
113 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
114 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
115 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
116 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
117 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
118 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
120 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
121 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
122 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
130 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
131 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
132 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
133 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
134 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
135 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
136 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
137 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
138 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
139 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
140 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
141 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
142 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
143 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
144 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
145 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
146 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
147 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
148 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
149 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
150 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
151 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
152 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
153 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
154 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
155 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
156 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
157 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
158 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
159 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
160 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
167 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
170 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
173 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
174 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
175 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
178 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
179 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
180 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
181 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
182 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
183 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
184 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
185 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
186 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
187 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
190 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
191 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
192 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
193 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.76
Metatranscriptomes 0.39
Isolates 7.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.57
Nodule 1.18
Rhizoplane 0.78
Rhizosphere 55.29
Stem 0
Stem Tuber 0
Unclassified 21.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000683 3300002705 Bacteria 18228
2 JGI25154J39366_1003575 3300002738 Bacteria 3190
3 JGI25157J39369_1000049 3300002741 Bacteria 115611
4 rootH1_10006570 3300003316 Bacteria 1876
5 rootH1_10006571 3300003316 Bacteria 2781
6 rootH1_10006572 3300003316 Bacteria 3736
7 rootH1_10008379 3300003316 Bacteria 23693
8 rootH1_10008379 3300003323 Bacteria 2024
9 rootH2_10001174 3300003320 Bacteria 13967
10 rootL2_10003946 3300003322 Bacteria 2727
11 rootL2_10005014 3300003322 Bacteria 29072
12 rootH1_10000852 3300003323 Bacteria 55220
13 rootH1_10008428 3300003316 Bacteria 1574
14 rootH1_10008428 3300003323 Bacteria 3403
15 rootH1_10014650 3300003323 Bacteria 10849
16 rootH1_10044092 3300003323 Bacteria 1832
17 rootH1_10046070 3300003323 Bacteria 2620
18 rootH1_10057935 3300003323 Bacteria 2479
19 rootH1_10059116 3300003323 Bacteria 3261
20 Ga0055539_1000338 3300003752 Bacteria 21884
21 Ga0055539_1000616 3300003752 Bacteria 9642
22 Ga0055533_1000010 3300003756 Bacteria 491196
23 Ga0055525_1000054 3300003759 Bacteria 216523
24 Ga0055525_1001286 3300003759 Bacteria 5172
25 Ga0055535_1000121 3300003761 Bacteria 83760
26 Ga0055529_1000223 3300003763 Bacteria 72861
27 Ga0055524_1000417 3300003775 Bacteria 35861
28 Ga0055531_10000568 3300003794 Bacteria 32319
29 Ga0055531_10011827 3300003794 Bacteria 4165
30 Ga0055531_10015791 3300003794 Bacteria 3301
31 Ga0058860_12180500 3300004801 Bacteria 1453
32 Ga0065165_1000181 3300005262 Bacteria 110867
33 Ga0065165_1000193 3300005262 Bacteria 106706
34 Ga0070690_100026687 3300005330 Bacteria 3565
35 Ga0070690_100170710 3300005330 Bacteria 1496
36 Ga0068869_100064868 3300005334 Bacteria 2687
37 Ga0070682_100009999 3300005337 Bacteria 5373
38 Ga0070673_100000912 3300005364 Bacteria 16684
39 Ga0070688_100066386 3300005365 Bacteria 2296
40 Ga0070688_100117558 3300005365 Bacteria 1776
41 Ga0070711_100088445 3300005439 Bacteria 2226
42 Ga0070706_100004433 3300005467 Bacteria 13561
43 Ga0070693_100000783 3300005547 Bacteria 14043
44 Ga0068855_100059018 3300005563 Bacteria 4490
45 Ga0068855_100088345 3300005563 Bacteria 3580
46 Ga0068855_100213663 3300005563 Bacteria 2166
47 Ga0068857_100022397 3300005577 Bacteria 5558
48 Ga0068854_100001635 3300005578 Bacteria 13642
49 Ga0068856_100000458 3300005614 Bacteria 44947
50 Ga0068866_10065382 3300005718 Bacteria 1902
51 Ga0068863_100061904 3300005841 Bacteria 3539
52 Ga0068860_100095494 3300005843 Bacteria 2834
53 Ga0070717_10051347 3300006028 Bacteria 3393
54 Ga0075366_10002454 3300006195 Bacteria 9494
55 Ga0075366_10015912 3300006195 Bacteria 4318
56 Ga0075366_10036394 3300006195 Bacteria 2902
57 Ga0075370_10001314 3300006353 Bacteria 10640
58 Ga0099823_1003280 3300006944 Bacteria 15226
59 Ga0105243_10049583 3300009148 Bacteria 3313
60 Ga0105249_10015010 3300009553 Bacteria 6852
61 Ga0157319_1000001 3300012497 Bacteria 423237
62 Ga0157369_10060083 3300013105 Bacteria 4099
63 Ga0157378_10084680 3300013297 Bacteria 2871
64 Ga0157378_10089775 3300013297 Bacteria 2792
65 Ga0157378_10164259 3300013297 Bacteria 2079
66 Ga0182008_10001236 3300014497 Bacteria 17537
67 Ga0182006_1000035 3300015261 Bacteria 232349
68 Ga0182007_10001662 3300015262 Bacteria 11780
69 Ga0182005_1000025 3300015265 Bacteria 235532
70 Ga0213872_10000045 3300021361 Bacteria 112229
71 Ga0213872_10000082 3300021361 Bacteria 88238
72 Ga0213872_10000183 3300021361 Bacteria 56352
73 Ga0213872_10000271 3300021361 Bacteria 44619
74 Ga0213872_10006316 3300021361 Bacteria 5967
75 Ga0213872_10027248 3300021361 Bacteria 2624
76 Ga0213872_10036752 3300021361 Bacteria 2237
77 Ga0209674_100003 3300025226 Bacteria 2196646
78 Ga0209563_100075 3300025230 Bacteria 216575
79 Ga0209563_100154 3300025230 Bacteria 64699
80 Ga0207427_100757 3300025231 Bacteria 14724
81 Ga0209258_100163 3300025242 Bacteria 149677
82 Ga0209258_100395 3300025242 Bacteria 54935
83 Ga0209646_1000138 3300025246 Bacteria 114892
84 Ga0209026_1000021 3300025250 Bacteria 375165
85 Ga0209677_100093 3300025253 Bacteria 101695
86 Ga0209677_100484 3300025253 Bacteria 22615
87 Ga0209677_101457 3300025253 Bacteria 10221
88 Ga0209759_1000025 3300025256 Bacteria 317082
89 Ga0209759_1000923 3300025256 Bacteria 21432
90 Ga0209759_1001069 3300025256 Bacteria 17985
91 Ga0209455_1000059 3300025272 Bacteria 339995
92 Ga0209564_1000005 3300025295 Bacteria 1147192
93 Ga0209050_1001838 3300025298 Bacteria 20590
94 Ga0209050_1001926 3300025298 Bacteria 19776
95 Ga0209256_1000078 3300025299 Bacteria 225992
96 Ga0209256_1000630 3300025299 Bacteria 48400
97 Ga0209051_1000855 3300025303 Bacteria 31073
98 Ga0209051_1003450 3300025303 Bacteria 10361
99 Ga0209257_1000103 3300025304 Bacteria 245859
100 Ga0209257_1000358 3300025304 Bacteria 93161
101 Ga0209257_1003965 3300025304 Bacteria 11990
102 Ga0207684_10000633 3300025910 Bacteria 41813
103 Ga0207695_10054829 3300025913 Bacteria 4159
104 Ga0207657_10057106 3300025919 Bacteria 3365
105 Ga0207709_10020450 3300025935 Bacteria 3733
106 Ga0207670_10058005 3300025936 Bacteria 2629
107 Ga0207665_10206413 3300025939 Bacteria 1433
108 Ga0207691_10050991 3300025940 Bacteria 3786
109 Ga0207689_10004417 3300025942 Bacteria 12765
110 Ga0207689_10163569 3300025942 Unclassified 1833
111 Ga0207667_10131636 3300025949 Bacteria 2576
112 Ga0207651_10021456 3300025960 Bacteria 3926
113 Ga0207640_10014536 3300025981 Bacteria 4536
114 Ga0207708_10160031 3300026075 Bacteria 1778
115 Ga0207702_10000227 3300026078 Bacteria 65464
116 Ga0207674_10031617 3300026116 Bacteria 5557
117 Ga0207675_100008499 3300026118 Bacteria 9663
118 Ga0209389_1001985 3300027296 Bacteria 15154
119 Ga0268266_10372764 3300028379 Bacteria 1345
120 Ga0265336_10000051 3300028666 Bacteria 114796
121 Ga0307517_10068141 3300028786 Bacteria 3246
122 Ga0307515_10086622 3300028794 Bacteria 3990
123 Ga0265324_10000683 3300029957 Bacteria 22779
124 Ga0307511_10062908 3300030521 Bacteria 2810
125 Ga0265332_10002021 3300031238 Bacteria 10634
126 Ga0265331_10005028 3300031250 Bacteria 8101
127 Ga0265327_10000028 3300031251 Bacteria 361066
128 Ga0307513_10011567 3300031456 Bacteria 10959
129 Ga0307509_10000039 3300031507 Bacteria 185329
130 Ga0307509_10054750 3300031507 Bacteria 4245
131 Ga0307408_100000029 3300031548 Bacteria 227806
132 Ga0307508_10008138 3300031616 Bacteria 9719
133 Ga0265314_10027505 3300031711 Bacteria 4258
134 Ga0307516_10041810 3300031730 Bacteria 4552
135 Ga0307516_10053556 3300031730 Bacteria 3945
136 Ga0307405_10119838 3300031731 Bacteria 1799
137 Ga0307406_10005361 3300031901 Bacteria 7019
138 Ga0307414_10126509 3300032004 Bacteria 1975
139 Ga0307411_10000389 3300032005 Bacteria 15007
140 Ga0307507_10103117 3300033179 Bacteria 2376
141 Ga0373948_0001967 3300034817 Bacteria 2957
142 Ga0373934_0004249 3300035086 Bacteria 5285
143 Ga0373949_0000165 3300035090 Bacteria 25128
144 Ga0373923_0095401 3300035111 Bacteria 1306
145 Ga0373936_0000002 3300035113 Bacteria 452874
146 Ga0373939_0000069 3300035114 Bacteria 33328
147 Ga0373956_0016133 3300035119 Bacteria 3134
148 Ga0373960_0006015 3300035121 Bacteria 2829
149 Ga0373961_0000009 3300035241 Bacteria 136228
150 Ga0373931_0000202 3300035691 Bacteria 25226
151 Ga0395899_0002658 3300037312 Bacteria 14407
152 Ga0395900_0018442 3300037418 Bacteria 7118
153 Ga0395900_0169567 3300037418 Bacteria 2223
154 Ga0395898_0084152 3300037466 Bacteria 3066
155 Ga0395905_0005956 3300037471 Bacteria 12350
156 Ga0395905_0031038 3300037471 Bacteria 5033
157 Ga0395901_0007466 3300038443 Bacteria 11036
158 Ga0400489_41798 3300039093 Bacteria 8293
159 Ga0436360_0709716 3300039438 Bacteria 8521
160 Ga0436360_0742391 3300039438 Bacteria 1539
161 Ga0436361_0248333 3300039447 Bacteria 14022
162 Ga0436361_0524686 3300039447 Bacteria 114368
163 Ga0436361_0528490 3300039447 Bacteria 4995
164 Ga0436361_0656892 3300039447 Bacteria 2996
165 Ga0436361_0779227 3300039447 Bacteria 5474
166 Ga0436361_0848343 3300039447 Bacteria 176869
167 Ga0436361_0989640 3300039447 Bacteria 18349
168 Ga0436361_1072915 3300039447 Bacteria 5669
169 Ga0436363_1314638 3300039450 Bacteria 6670
170 Ga0436362_0991516 3300039453 Unclassified 1386
171 Ga0439437_002730 3300042000 Bacteria 1900
172 Ga0450888_004634 3300042126 Bacteria 1441
173 Ga0450890_001376 3300042127 Bacteria 3506
174 Ga0450892_000190 3300042130 Bacteria 7169
175 Ga0450889_000737 3300042144 Bacteria 3512
176 Ga0439446_0000054 3300042156 Bacteria 17693
177 Ga0439434_0022718 3300042435 Bacteria 1886
178 Ga0450893_0004033 3300042532 Bacteria 2332
179 Ga0466969_0034142 3300044656 Bacteria 2578
180 Ga0466965_0003464 3300044683 Bacteria 6922
181 Ga0466966_0007891 3300044684 Bacteria 7045
182 Ga0466966_0071894 3300044684 Bacteria 2167
183 Ga0466961_0000131 3300044693 Bacteria 50219
184 Ga0466961_0010269 3300044693 Bacteria 5965
185 Ga0466964_0047430 3300044706 Bacteria 1753
186 Ga0453684_0009095 3300044712 Bacteria 17509
187 Ga0466971_0004024 3300044719 Bacteria 6322
188 Ga0466957_0020571 3300044842 Bacteria 3883
189 Ga0466959_0025743 3300045049 Bacteria 4363
190 Ga0495639_0016642 3300046475 Bacteria 3193
191 Ga0495583_0000284 3300046506 Bacteria 81053
192 Ga0495606_0003049 3300046507 Bacteria 18262
193 Ga0495622_0021602 3300046557 Bacteria 2996
194 Ga0495622_0048765 3300046557 Unclassified 1967
195 Ga0495633_0000180 3300046558 Bacteria 82176
196 Ga0495625_0160084 3300046660 Unclassified 1509
197 Ga0495649_0000743 3300046694 Bacteria 26385
198 Ga0495660_0062148 3300046810 Bacteria 2002
199 Ga0495672_0000198 3300047320 Bacteria 85895
200 Ga0495686_0015698 3300047472 Bacteria 5161
201 Ga0495686_0077564 3300047472 Bacteria 2034
202 Ga0496115_0242389 3300048918 Bacteria 1486
203 Ga0496116_0007386 3300048919 Bacteria 9763
204 Ga0496117_0000045 3300048920 Bacteria 301047
205 Ga0496118_0000041 3300048921 Bacteria 301047
206 Ga0496121_0024806 3300048924 Bacteria 5719
207 Ga0496121_0044659 3300048924 Bacteria 3818
208 Ga0496121_0085494 3300048924 Bacteria 2483
209 Ga0496122_0007060 3300048925 Bacteria 12618
210 Ga0496123_0005400 3300048926 Bacteria 12880
211 Ga0496124_0016874 3300048927 Bacteria 6918
212 Ga0501300_000320 3300049523 Bacteria 7292
213 Ga0501040_0000145 3300049576 Bacteria 38616
214 Ga0501042_0001408 3300049578 Bacteria 14136
215 Ga0501042_0033902 3300049578 Bacteria 3620
216 Ga0501211_000297 3300049658 Bacteria 4548
217 Ga0501232_002168 3300049757 Bacteria 1676
218 Ga0501268_014484 3300049765 Bacteria 1285
219 nmdc:mga0k408_4355_c1 3300050493 Bacteria 7514
220 nmdc:mga0k408_4361_c1 3300050493 Bacteria 7511
221 nmdc:mga0k408_9490_c1 3300050493 Bacteria 5247
222 nmdc:mga07m45_15304_c1 3300050496 Bacteria 4095
223 Ga0500635_0000077 3300053080 Bacteria 63561
224 Ga0500578_0018228 3300053086 Bacteria 4512
225 Ga0500583_0002943 3300053092 Bacteria 5248
226 Ga0500566_0028397 3300053094 Bacteria 3270
227 Ga0500640_007243 3300053095 Bacteria 4303
228 Ga0500554_001011 3300053102 Bacteria 5466
229 Ga0500572_006609 3300053111 Bacteria 2660
230 Ga0500595_000145 3300053119 Bacteria 46383
231 Ga0500614_032337 3300053123 Unclassified 1287
232 Ga0500559_0002833 3300053136 Bacteria 8761
233 Ga0500603_000981 3300053150 Bacteria 6744
234 Ga0500622_0000990 3300053156 Bacteria 24002
235 Ga0500639_041043 3300053163 Bacteria 2434
236 Ga0500636_0036934 3300053177 Bacteria 2891
237 Ga0590071_002263 3300059421 Bacteria 4881

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005439 Ga0070711_100088445 Ga0070711_1000884452 340
2 3300025939 Ga0207665_10206413 Ga0207665_102064131 340
3 3300013297 Ga0157378_10164259 Ga0157378_101642592 356
4 3300048918 Ga0496115_0242389 Ga0496115_0242389_224_1405 356
5 3300021361 Ga0213872_10036752 Ga0213872_100367522 365
6 3300039438 Ga0436360_0709716 Ga0436360_0709716_2228_3409 365
7 3300039447 Ga0436361_0528490 Ga0436361_0528490_773_1954 365
8 3300039450 Ga0436363_1314638 Ga0436363_1314638_4006_5187 366
9 3300053123 Ga0500614_032337 Ga0500614_032337_177_1277 366
10 3300042435 Ga0439434_0022718 Ga0439434_0022718_73_1248 368
11 3300048924 Ga0496121_0085494 Ga0496121_0085494_439_1614 368
12 3300013297 Ga0157378_10089775 Ga0157378_100897751 374
13 3300042000 Ga0439437_002730 Ga0439437_002730_156_1286 374
14 3300042126 Ga0450888_004634 Ga0450888_004634_85_1215 374
15 3300042127 Ga0450890_001376 Ga0450890_001376_1590_2720 374
16 3300042130 Ga0450892_000190 Ga0450892_000190_2423_3553 374
17 3300042144 Ga0450889_000737 Ga0450889_000737_1703_2833 374
18 3300042532 Ga0450893_0004033 Ga0450893_0004033_847_1977 374
19 3300005364 Ga0070673_100000912 Ga0070673_1000009122 375
20 3300025960 Ga0207651_10021456 Ga0207651_100214563 375
21 3300034817 Ga0373948_0001967 Ga0373948_0001967_1417_2592 376
22 3300035114 Ga0373939_0000069 Ga0373939_0000069_29771_30946 376
23 3300035121 Ga0373960_0006015 Ga0373960_0006015_1217_2392 376
24 3300035691 Ga0373931_0000202 Ga0373931_0000202_11349_12524 376
25 3300049757 Ga0501232_002168 Ga0501232_002168_295_1437 377
26 3300044656 Ga0466969_0034142 Ga0466969_0034142_1207_2406 378
27 3300044684 Ga0466966_0007891 Ga0466966_0007891_3127_4326 378
28 3300044693 Ga0466961_0010269 Ga0466961_0010269_3461_4660 378
29 3300044706 Ga0466964_0047430 Ga0466964_0047430_533_1732 378
30 3300044719 Ga0466971_0004024 Ga0466971_0004024_3815_5014 378
31 3300044842 Ga0466957_0020571 Ga0466957_0020571_1365_2564 378
32 3300045049 Ga0466959_0025743 Ga0466959_0025743_2598_3797 378
33 3300047472 Ga0495686_0015698 Ga0495686_0015698_3387_4526 378
34 3300039093 Ga0400489_41798 Ga0400489_41798_4056_5258 379
35 3300005365 Ga0070688_100066386 Ga0070688_1000663862 380
36 3300009553 Ga0105249_10015010 Ga0105249_100150102 380
37 3300003316 rootH1_10008379 rootH1_1000837925 381
38 3300003322 rootL2_10005014 rootL2_100050142 381
39 3300003323 rootH1_10014650 rootH1_100146502 381
40 3300021361 Ga0213872_10000183 Ga0213872_1000018321 381
41 3300039447 Ga0436361_0248333 Ga0436361_0248333_11714_12904 381
42 3300031731 Ga0307405_10119838 Ga0307405_101198381 382
43 iso_pu_bacteria 2886848708 2886850535 382
44 iso_pu_bacteria 2919493220 2919496041 382
45 iso_pu_bacteria 2919543075 2919544319 382
46 iso_pu_bacteria 2923525760 2923527919 382
47 3300053086 Ga0500578_0018228 Ga0500578_0018228_335_1495 383
48 3300053094 Ga0500566_0028397 Ga0500566_0028397_2003_3163 383
49 3300053150 Ga0500603_000981 Ga0500603_000981_98_1258 383
50 iso_pu_bacteria 2643221585 2643935538 383
51 iso_pu_bacteria 2643221639 2644221007 383
52 iso_pu_bacteria 2643221656 2644317321 383
53 3300006195 Ga0075366_10002454 Ga0075366_100024545 384
54 3300009148 Ga0105243_10049583 Ga0105243_100495833 384
55 3300025253 Ga0209677_101457 Ga0209677_1014574 384
56 3300050493 nmdc:mga0k408_9490_c1 nmdc:mga0k408_9490_c1_3655_4851 384
57 3300028666 Ga0265336_10000051 Ga0265336_1000005110 385
58 3300029957 Ga0265324_10000683 Ga0265324_100006837 385
59 iso_pu_bacteria 2643221544 2643746607 385
60 3300003316 rootH1_10006572 rootH1_100065722 386
61 3300003322 rootL2_10003946 rootL2_100039462 386
62 3300003323 rootH1_10008428 rootH1_100084284 386
63 3300005337 Ga0070682_100009999 Ga0070682_1000099992 386
64 3300021361 Ga0213872_10000045 Ga0213872_1000004580 386
65 3300021361 Ga0213872_10006316 Ga0213872_100063163 386
66 3300032005 Ga0307411_10000389 Ga0307411_100003895 386
67 3300035119 Ga0373956_0016133 Ga0373956_0016133_435_1601 386
68 3300037471 Ga0395905_0005956 Ga0395905_0005956_8672_9856 386
69 3300039438 Ga0436360_0742391 Ga0436360_0742391_161_1363 386
70 3300039447 Ga0436361_0524686 Ga0436361_0524686_74795_75970 386
71 3300039447 Ga0436361_0779227 Ga0436361_0779227_380_1639 386
72 3300039453 Ga0436362_0991516 Ga0436362_0991516_80_1282 386
73 3300049523 Ga0501300_000320 Ga0501300_000320_1841_3010 386
74 3300049658 Ga0501211_000297 Ga0501211_000297_364_1533 386
75 3300049765 Ga0501268_014484 Ga0501268_014484_38_1207 386
76 3300050496 nmdc:mga07m45_15304_c1 nmdc:mga07m45_15304_c1_1576_2751 386
77 iso_pu_bacteria 2728369097 2729145721 386
78 iso_pu_bacteria 2738541337 2739057512 386
79 iso_pu_bacteria 651053060 651177454 386
80 3300003320 rootH2_10001174 rootH2_1000117415 387
81 3300004801 Ga0058860_12180500 Ga0058860_121805001 387
82 3300028794 Ga0307515_10086622 Ga0307515_100866223 387
83 3300003794 Ga0055531_10000568 Ga0055531_100005683 388
84 3300025298 Ga0209050_1001838 Ga0209050_100183811 388
85 3300025303 Ga0209051_1003450 Ga0209051_10034504 388
86 3300025304 Ga0209257_1000103 Ga0209257_100010366 388
87 3300025935 Ga0207709_10020450 Ga0207709_100204502 388
88 3300031250 Ga0265331_10005028 Ga0265331_100050282 388
89 3300031251 Ga0265327_10000028 Ga0265327_1000002845 388
90 3300031548 Ga0307408_100000029 Ga0307408_100000029203 388
91 3300042156 Ga0439446_0000054 Ga0439446_0000054_6111_7298 388
92 iso_pu_bacteria 640427133 640489428 388
93 3300005334 Ga0068869_100064868 Ga0068869_1000648682 389
94 3300005718 Ga0068866_10065382 Ga0068866_100653822 389
95 3300005841 Ga0068863_100061904 Ga0068863_1000619042 389
96 3300005843 Ga0068860_100095494 Ga0068860_1000954942 389
97 3300021361 Ga0213872_10000082 Ga0213872_1000008243 389
98 3300021361 Ga0213872_10027248 Ga0213872_100272482 389
99 3300025942 Ga0207689_10163569 Ga0207689_101635692 389
100 3300031711 Ga0265314_10027505 Ga0265314_100275053 389
101 3300039447 Ga0436361_0656892 Ga0436361_0656892_213_1406 389
102 3300039447 Ga0436361_0989640 Ga0436361_0989640_1379_2575 389
103 3300039447 Ga0436361_1072915 Ga0436361_1072915_898_2094 389
104 iso_pu_bacteria 2831864461 2831868538 389
105 3300003323 rootH1_10046070 rootH1_100460702 390
106 3300003759 Ga0055525_1000054 Ga0055525_100005483 390
107 3300003775 Ga0055524_1000417 Ga0055524_100041720 390
108 3300025230 Ga0209563_100075 Ga0209563_100075113 390
109 3300025299 Ga0209256_1000078 Ga0209256_100007849 390
110 3300031901 Ga0307406_10005361 Ga0307406_100053613 390
111 3300053156 Ga0500622_0000990 Ga0500622_0000990_16472_17656 390
112 3300005262 Ga0065165_1000193 Ga0065165_100019326 391
113 3300005330 Ga0070690_100170710 Ga0070690_1001707101 391
114 3300005365 Ga0070688_100117558 Ga0070688_1001175581 391
115 3300005467 Ga0070706_100004433 Ga0070706_1000044332 391
116 3300006028 Ga0070717_10051347 Ga0070717_100513473 391
117 3300013297 Ga0157378_10084680 Ga0157378_100846802 391
118 3300025910 Ga0207684_10000633 Ga0207684_1000063325 391
119 3300025936 Ga0207670_10058005 Ga0207670_100580052 391
120 3300026075 Ga0207708_10160031 Ga0207708_101600311 391
121 3300028379 Ga0268266_10372764 Ga0268266_103727641 391
122 3300028786 Ga0307517_10068141 Ga0307517_100681413 391
123 3300031238 Ga0265332_10002021 Ga0265332_100020213 391
124 3300031507 Ga0307509_10000039 Ga0307509_10000039162 391
125 3300031616 Ga0307508_10008138 Ga0307508_100081384 391
126 3300031730 Ga0307516_10041810 Ga0307516_100418101 391
127 3300031730 Ga0307516_10053556 Ga0307516_100535562 391
128 3300033179 Ga0307507_10103117 Ga0307507_101031173 391
129 3300035090 Ga0373949_0000165 Ga0373949_0000165_9415_10602 391
130 3300035113 Ga0373936_0000002 Ga0373936_0000002_311804_313006 391
131 3300035241 Ga0373961_0000009 Ga0373961_0000009_125626_126819 391
132 3300046557 Ga0495622_0048765 Ga0495622_0048765_663_1850 391
133 3300046660 Ga0495625_0160084 Ga0495625_0160084_170_1357 391
134 3300053092 Ga0500583_0002943 Ga0500583_0002943_3834_5021 391
135 3300053095 Ga0500640_007243 Ga0500640_007243_30_1244 391
136 3300053102 Ga0500554_001011 Ga0500554_001011_3662_4957 391
137 3300053111 Ga0500572_006609 Ga0500572_006609_861_2156 391
138 3300053119 Ga0500595_000145 Ga0500595_000145_32218_33513 391
139 3300053163 Ga0500639_041043 Ga0500639_041043_1032_2219 391
140 3300053177 Ga0500636_0036934 Ga0500636_0036934_11_1198 391
141 iso_pu_bacteria 2643221646 2644259852 391
142 3300005547 Ga0070693_100000783 Ga0070693_1000007835 392
143 3300031507 Ga0307509_10054750 Ga0307509_100547502 392
144 3300003761 Ga0055535_1000121 Ga0055535_100012149 393
145 3300003763 Ga0055529_1000223 Ga0055529_10002239 393
146 3300005563 Ga0068855_100088345 Ga0068855_1000883453 393
147 3300025242 Ga0209258_100163 Ga0209258_10016360 393
148 3300025256 Ga0209759_1001069 Ga0209759_10010693 393
149 3300025272 Ga0209455_1000059 Ga0209455_1000059233 393
150 3300037312 Ga0395899_0002658 Ga0395899_0002658_11043_12245 393
151 3300037418 Ga0395900_0018442 Ga0395900_0018442_5283_6485 393
152 3300037471 Ga0395905_0031038 Ga0395905_0031038_1858_3060 393
153 3300049576 Ga0501040_0000145 Ga0501040_0000145_7141_8337 393
154 3300049578 Ga0501042_0001408 Ga0501042_0001408_9156_10352 393
155 3300049578 Ga0501042_0033902 Ga0501042_0033902_1847_3043 393
156 3300005563 Ga0068855_100213663 Ga0068855_1002136632 394
157 3300006195 Ga0075366_10015912 Ga0075366_100159124 394
158 3300021361 Ga0213872_10000271 Ga0213872_1000027124 394
159 3300039447 Ga0436361_0848343 Ga0436361_0848343_71208_72413 394
160 3300050493 nmdc:mga0k408_4361_c1 nmdc:mga0k408_4361_c1_2532_3743 394
161 iso_pu_bacteria 2846037992 2846038662 394
162 3300003323 rootH1_10000852 rootH1_1000085219 396
163 3300003794 Ga0055531_10011827 Ga0055531_100118273 396
164 3300003794 Ga0055531_10015791 Ga0055531_100157912 396
165 3300005262 Ga0065165_1000181 Ga0065165_100018136 396
166 3300006353 Ga0075370_10001314 Ga0075370_100013144 396
167 3300006944 Ga0099823_1003280 Ga0099823_100328010 396
168 3300012497 Ga0157319_1000001 Ga0157319_1000001317 396
169 3300025295 Ga0209564_1000005 Ga0209564_1000005159 396
170 3300025298 Ga0209050_1001926 Ga0209050_10019266 396
171 3300025299 Ga0209256_1000630 Ga0209256_100063016 396
172 3300025303 Ga0209051_1000855 Ga0209051_100085512 396
173 3300025304 Ga0209257_1000358 Ga0209257_100035854 396
174 3300025304 Ga0209257_1003965 Ga0209257_10039653 396
175 3300027296 Ga0209389_1001985 Ga0209389_100198510 396
176 3300031456 Ga0307513_10011567 Ga0307513_100115673 396
177 3300048927 Ga0496124_0016874 Ga0496124_0016874_4842_6050 396
178 iso_pu_bacteria 2600255292 2601669994 396
179 iso_pu_bacteria 2857547612 2857550940 396
180 iso_pu_bacteria 2885080285 2885082646 396
181 iso_pu_bacteria 2932410948 2932413483 396
182 iso_pu_bacteria 2932416698 2932417543 396
183 3300006195 Ga0075366_10036394 Ga0075366_100363942 397
184 3300044683 Ga0466965_0003464 Ga0466965_0003464_1258_2469 397
185 3300044684 Ga0466966_0071894 Ga0466966_0071894_825_2036 397
186 3300044693 Ga0466961_0000131 Ga0466961_0000131_21225_22436 397
187 3300044712 Ga0453684_0009095 Ga0453684_0009095_11874_13070 397
188 3300050493 nmdc:mga0k408_4355_c1 nmdc:mga0k408_4355_c1_1775_2971 397
189 3300059421 Ga0590071_002263 Ga0590071_002263_1790_2995 397
190 3300002705 JGI25156J39149_1000683 JGI25156J39149_10006839 398
191 3300002738 JGI25154J39366_1003575 JGI25154J39366_10035751 398
192 3300002741 JGI25157J39369_1000049 JGI25157J39369_100004978 398
193 3300003316 rootH1_10006570 rootH1_100065702 398
194 3300003316 rootH1_10006571 rootH1_100065712 398
195 3300003323 rootH1_10044092 rootH1_100440922 398
196 3300003323 rootH1_10057935 rootH1_100579352 398
197 3300003323 rootH1_10059116 rootH1_100591162 398
198 3300003752 Ga0055539_1000338 Ga0055539_10003384 398
199 3300003752 Ga0055539_1000616 Ga0055539_10006164 398
200 3300003756 Ga0055533_1000010 Ga0055533_1000010167 398
201 3300003759 Ga0055525_1001286 Ga0055525_10012863 398
202 3300005330 Ga0070690_100026687 Ga0070690_1000266872 398
203 3300005563 Ga0068855_100059018 Ga0068855_1000590183 398
204 3300005577 Ga0068857_100022397 Ga0068857_1000223973 398
205 3300005578 Ga0068854_100001635 Ga0068854_1000016359 398
206 3300005614 Ga0068856_100000458 Ga0068856_10000045814 398
207 3300013105 Ga0157369_10060083 Ga0157369_100600834 398
208 3300014497 Ga0182008_10001236 Ga0182008_1000123614 398
209 3300015261 Ga0182006_1000035 Ga0182006_100003540 398
210 3300015262 Ga0182007_10001662 Ga0182007_100016624 398
211 3300015265 Ga0182005_1000025 Ga0182005_100002541 398
212 3300025226 Ga0209674_100003 Ga0209674_1000031503 398
213 3300025230 Ga0209563_100154 Ga0209563_10015437 398
214 3300025231 Ga0207427_100757 Ga0207427_1007578 398
215 3300025242 Ga0209258_100395 Ga0209258_10039512 398
216 3300025246 Ga0209646_1000138 Ga0209646_100013830 398
217 3300025250 Ga0209026_1000021 Ga0209026_1000021189 398
218 3300025253 Ga0209677_100093 Ga0209677_10009322 398
219 3300025253 Ga0209677_100484 Ga0209677_10048411 398
220 3300025256 Ga0209759_1000025 Ga0209759_1000025189 398
221 3300025256 Ga0209759_1000923 Ga0209759_10009236 398
222 3300025913 Ga0207695_10054829 Ga0207695_100548292 398
223 3300025919 Ga0207657_10057106 Ga0207657_100571062 398
224 3300025940 Ga0207691_10050991 Ga0207691_100509912 398
225 3300025942 Ga0207689_10004417 Ga0207689_100044175 398
226 3300025949 Ga0207667_10131636 Ga0207667_101316362 398
227 3300025981 Ga0207640_10014536 Ga0207640_100145362 398
228 3300026078 Ga0207702_10000227 Ga0207702_1000022714 398
229 3300026116 Ga0207674_10031617 Ga0207674_100316173 398
230 3300026118 Ga0207675_100008499 Ga0207675_1000084992 398
231 3300030521 Ga0307511_10062908 Ga0307511_100629083 398
232 3300032004 Ga0307414_10126509 Ga0307414_101265092 398
233 3300035086 Ga0373934_0004249 Ga0373934_0004249_3260_4456 398
234 3300035111 Ga0373923_0095401 Ga0373923_0095401_84_1280 398
235 3300037418 Ga0395900_0169567 Ga0395900_0169567_752_1948 398
236 3300037466 Ga0395898_0084152 Ga0395898_0084152_319_1515 398
237 3300038443 Ga0395901_0007466 Ga0395901_0007466_6855_8051 398
238 3300046475 Ga0495639_0016642 Ga0495639_0016642_134_1330 398
239 3300046506 Ga0495583_0000284 Ga0495583_0000284_21240_22436 398
240 3300046507 Ga0495606_0003049 Ga0495606_0003049_11036_12232 398
241 3300046557 Ga0495622_0021602 Ga0495622_0021602_1320_2540 398
242 3300046558 Ga0495633_0000180 Ga0495633_0000180_72800_74020 398
243 3300046694 Ga0495649_0000743 Ga0495649_0000743_8630_9826 398
244 3300046810 Ga0495660_0062148 Ga0495660_0062148_110_1408 398
245 3300047320 Ga0495672_0000198 Ga0495672_0000198_57330_58628 398
246 3300047472 Ga0495686_0077564 Ga0495686_0077564_539_1837 398
247 3300048919 Ga0496116_0007386 Ga0496116_0007386_3708_4928 398
248 3300048920 Ga0496117_0000045 Ga0496117_0000045_188427_189647 398
249 3300048921 Ga0496118_0000041 Ga0496118_0000041_188427_189647 398
250 3300048924 Ga0496121_0024806 Ga0496121_0024806_246_1466 398
251 3300048924 Ga0496121_0044659 Ga0496121_0044659_235_1455 398
252 3300048925 Ga0496122_0007060 Ga0496122_0007060_2276_3496 398
253 3300048926 Ga0496123_0005400 Ga0496123_0005400_457_1677 398
254 3300053080 Ga0500635_0000077 Ga0500635_0000077_39711_40907 398
255 3300053136 Ga0500559_0002833 Ga0500559_0002833_4082_5278 398

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01547

SBP_bac_1

Bacterial extracellular solute-binding protein

90

367

0.92

PF13416

SBP_bac_8

Bacterial extracellular solute-binding protein

101

398

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hz7-assembly1.cif.gz_A high-resolution crystal structure of the minor dna-binding pilin comp from neisseria meningitidis in fusion with mbp 0.9869 32 398
5hzv-assembly1.cif.gz_A crystal structure of the zona pellucida module of human endoglin/cd105 0.9866 32 397
5tj2-assembly3.cif.gz_C gasdermin-b c-terminal domain containing the polymorphism residues gly299:ser306 fused to maltose binding protein 0.9866 32 396
4b3n-assembly1.cif.gz_A crystal structure of rhesus trim5alpha pry/spry domain 0.9865 32 396
3jyr-assembly1.cif.gz_A crystal structures of the gach receptor of streptomyces glaucescens gla.o in the unliganded form and in complex with acarbose and an acarbose homolog. comparison with acarbose-loaded maltose binding protein of salmonella typhimurium. 0.9864 32 397
ID Description Score Start End Superfamily
af_P0AEX9_30_395_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9858 32 395 3.40.190.10
af_P0AEX9_30_395_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9751 32 395 3.40.190.10
3g7wA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9735 138 398 3.40.190.10
3n95B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9727 32 338 3.40.190.10
2nvuB02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9716 140 395 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A846UIP0-F1-model_v4 Maltodextrin-binding protein 0.987 70 398 GO:0015144
GO:0015768
GO:0042597
GO:0042956
GO:0055052
GO:1901982
AF-A0A736GZQ8-F1-model_v4 Maltodextrin-binding protein 0.9861 32 397 GO:0015144
GO:0015768
GO:0030288
GO:0042956
GO:0055052
GO:1901982
AF-A0A2R7PL91-F1-model_v4 deleted 0.9846 43 397
AF-A0A7S3B622-F1-model_v4 Maltodextrin-binding protein 0.9846 137 277 GO:0015144
GO:0015768
GO:0042956
GO:1901982
AF-A0A0F8H8H8-F1-model_v4 Sugar ABC transporter substrate-binding protein 0.984 174 396 GO:0015144
GO:0015768
GO:0042956
GO:0055052
GO:1901982

Feature Viewer

pLDDT pTM Quality
92.04 0.87 High
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Predicted Structure (AlphaFold2)

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