F366381
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 256 | 182 | 512 | 344 |
Family's Representative Sequence
| Representative Sequence | 3300006178|Ga0075367_10039439|Ga0075367_100394392 |
| Length | 398 |
| Sequence | MIFGPRASKVAVCRDPLAHDHERAWRPAVQSMSGTLPARSAPQAFSANQKVMAAWYQFADLFLSRLDAEAAHGLALRALKTGLMPADRRPDPSSLTISVWGRTLPNPVGLAAGFDKNAEVPDAMLAMGFGLVEIGSVTPRPQEGNPRPRLFRLAEDRGVINRMGFPGQGLDAARSRLAARPRRGFVGVNVGANKDTTDRAADYVVGCAALAQYADYLVCNVSSPNTPGLRNLQGRTQLADLLKRVQDAIARKPVPLLVKIAPDATDDDLDDIVAVCRDLRMDGIIVGNTTLSRPPSLASPRRTETGGLSGPPLMALSTEVLRRTAQRAEKQFPLVGCGGIASGADAYAKIRAGATLVQLYSAMVYDGPPLIRRIKDELAALLARDGFASVSDAVGVDV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 2 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 3 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 4 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 8 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 26 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 31 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 32 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 33 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 34 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 35 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 36 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 37 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 38 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 39 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 40 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 53 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 90 | 3300030735 | Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 | Metagenome | Rhizosphere |
| 91 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 92 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 93 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 94 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 95 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 96 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 97 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 98 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 99 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 100 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 101 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 102 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 103 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 104 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 105 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 106 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 107 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 108 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 109 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 110 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 111 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 112 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 113 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 114 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 115 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 116 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 117 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 122 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 123 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 124 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 125 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 126 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 127 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 128 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 129 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 130 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 131 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 132 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 133 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 134 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 135 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 136 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 137 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 138 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 139 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 140 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 143 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 146 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 147 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 148 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 149 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 150 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 151 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 152 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 153 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 154 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 155 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 156 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 157 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 158 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 159 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 160 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 161 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 162 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 163 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 164 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 165 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 166 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 167 | 3300053723 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere | Metagenome | Endosphere |
| 168 | 3300053729 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere | Metagenome | Endosphere |
| 169 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 170 | 3300053733 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere | Metagenome | Endosphere |
| 171 | 2643221574 | Brevundimonas sp. Root608 | Isolate | Unclassified |
| 172 | 2643221663 | Brevundimonas sp. Root1279 | Isolate | Unclassified |
| 173 | 2643221699 | Brevundimonas sp. Root1423 | Isolate | Unclassified |
| 174 | 2739367664 | Novosphingobium sp. GV002 | Isolate | Unclassified |
| 175 | 2739367865 | Novosphingobium sp. GV013 | Isolate | Unclassified |
| 176 | 2842694124 | Methylopila sp. R-72369 | Isolate | Unclassified |
| 177 | 2855020534 | Paracoccus endophyticus SYSUP0003 | Isolate | Stem Tuber |
| 178 | 2882806704 | Pelagerythrobacter rhizovicinus AY-3R | Isolate | Rhizosphere |
| 179 | 2883291878 | Hypericibacter terrae R5913 | Isolate | Rhizosphere |
| 180 | 2883577096 | Roseococcus sp. SYP-B2431 | Isolate | Rhizosphere |
| 181 | 2941485952 | Brevundimonas faecalis 2814 | Isolate | Rhizosphere |
| 182 | 3000865235 | Altericroceibacterium indicum DSM 18604 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.92 |
| Metatranscriptomes | 0 |
| Isolates | 5.08 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 14.06 |
| Nodule | 0 |
| Rhizoplane | 5.86 |
| Rhizosphere | 70.31 |
| Stem | 0 |
| Stem Tuber | 0.39 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0075367_10039439 | 3300006178 | Bacteria | 2754 |
| 2 | Ga0055536_1000251 | 3300003781 | Bacteria | 42530 |
| 3 | Ga0055536_1001930 | 3300003781 | Bacteria | 11995 |
| 4 | Ga0055531_10017070 | 3300003794 | Bacteria | 3087 |
| 5 | Ga0070658_10001686 | 3300005327 | Bacteria | 18655 |
| 6 | Ga0070658_10233539 | 3300005327 | Bacteria | 1558 |
| 7 | Ga0070683_100026552 | 3300005329 | Bacteria | 5216 |
| 8 | Ga0070666_10016565 | 3300005335 | Bacteria | 4716 |
| 9 | Ga0070680_100000527 | 3300005336 | Bacteria | 26109 |
| 10 | Ga0070660_100008695 | 3300005339 | Bacteria | 7108 |
| 11 | Ga0070660_100279965 | 3300005339 | Bacteria | 1365 |
| 12 | Ga0070689_100277644 | 3300005340 | Bacteria | 1389 |
| 13 | Ga0070691_10002892 | 3300005341 | Bacteria | 7697 |
| 14 | Ga0070661_100097139 | 3300005344 | Bacteria | 2187 |
| 15 | Ga0070692_10007884 | 3300005345 | Bacteria | 4720 |
| 16 | Ga0070668_100029061 | 3300005347 | Bacteria | 4197 |
| 17 | Ga0070669_100000280 | 3300005353 | Bacteria | 40554 |
| 18 | Ga0070675_100183551 | 3300005354 | Bacteria | 1810 |
| 19 | Ga0070675_100220657 | 3300005354 | Bacteria | 1651 |
| 20 | Ga0070671_100000005 | 3300005355 | Bacteria | 256547 |
| 21 | Ga0070671_100002548 | 3300005355 | Bacteria | 14120 |
| 22 | Ga0070673_100261111 | 3300005364 | Bacteria | 1513 |
| 23 | Ga0070659_100006630 | 3300005366 | Bacteria | 8365 |
| 24 | Ga0070659_100059973 | 3300005366 | Bacteria | 3005 |
| 25 | Ga0070667_100000131 | 3300005367 | Bacteria | 94986 |
| 26 | Ga0070667_100022870 | 3300005367 | Bacteria | 5184 |
| 27 | Ga0070663_100262983 | 3300005455 | Bacteria | 1369 |
| 28 | Ga0070681_10002682 | 3300005458 | Bacteria | 16356 |
| 29 | Ga0070681_10253178 | 3300005458 | Bacteria | 1673 |
| 30 | Ga0070706_100268366 | 3300005467 | Bacteria | 1593 |
| 31 | Ga0070698_100000125 | 3300005471 | Bacteria | 66620 |
| 32 | Ga0070679_100000001 | 3300005530 | Bacteria | 764811 |
| 33 | Ga0070679_100001997 | 3300005530 | Bacteria | 18319 |
| 34 | Ga0070684_100029837 | 3300005535 | Bacteria | 4626 |
| 35 | Ga0070684_100315073 | 3300005535 | Bacteria | 1437 |
| 36 | Ga0070697_100219564 | 3300005536 | Bacteria | 1620 |
| 37 | Ga0070686_100069140 | 3300005544 | Bacteria | 2305 |
| 38 | Ga0068855_100003418 | 3300005563 | Bacteria | 19430 |
| 39 | Ga0068855_100021206 | 3300005563 | Bacteria | 7789 |
| 40 | Ga0068855_100034629 | 3300005563 | Bacteria | 6019 |
| 41 | Ga0068855_100101379 | 3300005563 | Bacteria | 3314 |
| 42 | Ga0068855_100221730 | 3300005563 | Bacteria | 2120 |
| 43 | Ga0070664_100006112 | 3300005564 | Bacteria | 9741 |
| 44 | Ga0068854_100000420 | 3300005578 | Bacteria | 26483 |
| 45 | Ga0068854_100188070 | 3300005578 | Bacteria | 1617 |
| 46 | Ga0068856_100384233 | 3300005614 | Bacteria | 1423 |
| 47 | Ga0068852_100000174 | 3300005616 | Bacteria | 43394 |
| 48 | Ga0068852_100112147 | 3300005616 | Bacteria | 2481 |
| 49 | Ga0068852_100144410 | 3300005616 | Bacteria | 2206 |
| 50 | Ga0068859_100124617 | 3300005617 | Bacteria | 2645 |
| 51 | Ga0068864_100026919 | 3300005618 | Bacteria | 4850 |
| 52 | Ga0068864_100047066 | 3300005618 | Bacteria | 3702 |
| 53 | Ga0068858_100001280 | 3300005842 | Bacteria | 25983 |
| 54 | Ga0068858_100014074 | 3300005842 | Bacteria | 7544 |
| 55 | Ga0081455_10001258 | 3300005937 | Bacteria | 31648 |
| 56 | Ga0081455_10005742 | 3300005937 | Bacteria | 13528 |
| 57 | Ga0081455_10031233 | 3300005937 | Bacteria | 4823 |
| 58 | Ga0081539_10005967 | 3300005985 | Bacteria | 12006 |
| 59 | Ga0081539_10008345 | 3300005985 | Bacteria | 9052 |
| 60 | Ga0075365_10009106 | 3300006038 | Bacteria | 5683 |
| 61 | Ga0075365_10226652 | 3300006038 | Bacteria | 1311 |
| 62 | Ga0075369_10019471 | 3300006186 | Bacteria | 2771 |
| 63 | Ga0097620_100124624 | 3300006931 | Bacteria | 2645 |
| 64 | Ga0105240_10002147 | 3300009093 | Bacteria | 32213 |
| 65 | Ga0105240_10043912 | 3300009093 | Bacteria | 5684 |
| 66 | Ga0105242_10103475 | 3300009176 | Bacteria | 2416 |
| 67 | Ga0105248_10003656 | 3300009177 | Bacteria | 17065 |
| 68 | Ga0105248_10011608 | 3300009177 | Bacteria | 9704 |
| 69 | Ga0105248_10092005 | 3300009177 | Bacteria | 3416 |
| 70 | Ga0105248_10236848 | 3300009177 | Bacteria | 2055 |
| 71 | Ga0105237_10184456 | 3300009545 | Bacteria | 2087 |
| 72 | Ga0105238_10061368 | 3300009551 | Bacteria | 3762 |
| 73 | Ga0157373_10000049 | 3300013100 | Bacteria | 109203 |
| 74 | Ga0157373_10000516 | 3300013100 | Bacteria | 30365 |
| 75 | Ga0157371_10042122 | 3300013102 | Bacteria | 3255 |
| 76 | Ga0157370_10086266 | 3300013104 | Bacteria | 2949 |
| 77 | Ga0157369_10013841 | 3300013105 | Bacteria | 9117 |
| 78 | Ga0157369_10113083 | 3300013105 | Bacteria | 2884 |
| 79 | Ga0157369_10547605 | 3300013105 | Bacteria | 1196 |
| 80 | Ga0163162_10148842 | 3300013306 | Bacteria | 2458 |
| 81 | Ga0157380_10193500 | 3300014326 | Bacteria | 1798 |
| 82 | Ga0213876_10000371 | 3300021384 | Bacteria | 38154 |
| 83 | Ga0213876_10010701 | 3300021384 | Bacteria | 4914 |
| 84 | Ga0209676_1000038 | 3300025292 | Bacteria | 449305 |
| 85 | Ga0209050_1011400 | 3300025298 | Bacteria | 4221 |
| 86 | Ga0207426_1014165 | 3300025302 | Bacteria | 2930 |
| 87 | Ga0209257_1000433 | 3300025304 | Bacteria | 80612 |
| 88 | Ga0207680_10027886 | 3300025903 | Bacteria | 3152 |
| 89 | Ga0207647_10011663 | 3300025904 | Bacteria | 6154 |
| 90 | Ga0207647_10158468 | 3300025904 | Bacteria | 1321 |
| 91 | Ga0207705_10000007 | 3300025909 | Bacteria | 597387 |
| 92 | Ga0207684_10158591 | 3300025910 | Bacteria | 1948 |
| 93 | Ga0207707_10030410 | 3300025912 | Bacteria | 4725 |
| 94 | Ga0207695_10001471 | 3300025913 | Bacteria | 39463 |
| 95 | Ga0207695_10113426 | 3300025913 | Bacteria | 2687 |
| 96 | Ga0207671_10101731 | 3300025914 | Bacteria | 2177 |
| 97 | Ga0207660_10000421 | 3300025917 | Bacteria | 27931 |
| 98 | Ga0207657_10016468 | 3300025919 | Bacteria | 7128 |
| 99 | Ga0207652_10000002 | 3300025921 | Bacteria | 878035 |
| 100 | Ga0207652_10032595 | 3300025921 | Bacteria | 4382 |
| 101 | Ga0207681_10000096 | 3300025923 | Bacteria | 74995 |
| 102 | Ga0207659_10342888 | 3300025926 | Bacteria | 1238 |
| 103 | Ga0207700_10341448 | 3300025928 | Bacteria | 1302 |
| 104 | Ga0207644_10000008 | 3300025931 | Bacteria | 354219 |
| 105 | Ga0207690_10001808 | 3300025932 | Bacteria | 13134 |
| 106 | Ga0207690_10049455 | 3300025932 | Bacteria | 2803 |
| 107 | Ga0207686_10058832 | 3300025934 | Bacteria | 2425 |
| 108 | Ga0207670_10250479 | 3300025936 | Bacteria | 1369 |
| 109 | Ga0207711_10030112 | 3300025941 | Bacteria | 4578 |
| 110 | Ga0207679_10016781 | 3300025945 | Bacteria | 4867 |
| 111 | Ga0207667_10029691 | 3300025949 | Bacteria | 5925 |
| 112 | Ga0207667_10042090 | 3300025949 | Bacteria | 4858 |
| 113 | Ga0207667_10047869 | 3300025949 | Bacteria | 4523 |
| 114 | Ga0207667_10063210 | 3300025949 | Bacteria | 3868 |
| 115 | Ga0207667_10130875 | 3300025949 | Bacteria | 2584 |
| 116 | Ga0207668_10123404 | 3300025972 | Bacteria | 1965 |
| 117 | Ga0207640_10002296 | 3300025981 | Bacteria | 10271 |
| 118 | Ga0207658_10241705 | 3300025986 | Bacteria | 1530 |
| 119 | Ga0207703_10002081 | 3300026035 | Bacteria | 17588 |
| 120 | Ga0207703_10017206 | 3300026035 | Bacteria | 5641 |
| 121 | Ga0207639_10193857 | 3300026041 | Bacteria | 1737 |
| 122 | Ga0207678_10300764 | 3300026067 | Bacteria | 1379 |
| 123 | Ga0207702_10007285 | 3300026078 | Bacteria | 9460 |
| 124 | Ga0207702_10284090 | 3300026078 | Bacteria | 1565 |
| 125 | Ga0207641_10088650 | 3300026088 | Bacteria | 2702 |
| 126 | Ga0207676_10041253 | 3300026095 | Bacteria | 3542 |
| 127 | Ga0207698_10000098 | 3300026142 | Bacteria | 55118 |
| 128 | Ga0268266_10088560 | 3300028379 | Bacteria | 2709 |
| 129 | Ga0268265_10213342 | 3300028380 | Bacteria | 1684 |
| 130 | Ga0265338_10040865 | 3300028800 | Bacteria | 4348 |
| 131 | Ga0316178_1049905 | 3300030735 | Bacteria | 2384 |
| 132 | Ga0265320_10001230 | 3300031240 | Bacteria | 18812 |
| 133 | Ga0265339_10041813 | 3300031249 | Bacteria | 2541 |
| 134 | Ga0265327_10000794 | 3300031251 | Bacteria | 48452 |
| 135 | Ga0316579_10032429 | 3300031691 | Bacteria | 2396 |
| 136 | Ga0265314_10007961 | 3300031711 | Bacteria | 9140 |
| 137 | Ga0307405_10046018 | 3300031731 | Bacteria | 2678 |
| 138 | Ga0307413_10070293 | 3300031824 | Bacteria | 2200 |
| 139 | Ga0307413_10077416 | 3300031824 | Bacteria | 2118 |
| 140 | Ga0307410_10267207 | 3300031852 | Bacteria | 1336 |
| 141 | Ga0307412_10016565 | 3300031911 | Bacteria | 4394 |
| 142 | Ga0307416_100470523 | 3300032002 | Bacteria | 1314 |
| 143 | Ga0307416_100490294 | 3300032002 | Bacteria | 1291 |
| 144 | Ga0307414_10015374 | 3300032004 | Bacteria | 4618 |
| 145 | Ga0307414_10031560 | 3300032004 | Bacteria | 3477 |
| 146 | Ga0307414_10121555 | 3300032004 | Bacteria | 2008 |
| 147 | Ga0307414_10457112 | 3300032004 | Bacteria | 1121 |
| 148 | Ga0307411_10121396 | 3300032005 | Bacteria | 1891 |
| 149 | Ga0373931_0051338 | 3300035691 | Bacteria | 2196 |
| 150 | Ga0373927_0000260 | 3300035695 | Bacteria | 41667 |
| 151 | Ga0373927_0109575 | 3300035695 | Bacteria | 1799 |
| 152 | Ga0316582_0037652 | 3300036647 | Bacteria | 3000 |
| 153 | Ga0316584_0080705 | 3300036712 | Bacteria | 2437 |
| 154 | Ga0395899_0013106 | 3300037312 | Bacteria | 6340 |
| 155 | Ga0395900_0002661 | 3300037418 | Bacteria | 19525 |
| 156 | Ga0395900_0019217 | 3300037418 | Bacteria | 6966 |
| 157 | Ga0395898_0013304 | 3300037466 | Bacteria | 8473 |
| 158 | Ga0395905_0012607 | 3300037471 | Bacteria | 8133 |
| 159 | Ga0395901_0001490 | 3300038443 | Bacteria | 24357 |
| 160 | Ga0395901_0003211 | 3300038443 | Bacteria | 16457 |
| 161 | Ga0395901_0016579 | 3300038443 | Bacteria | 7507 |
| 162 | Ga0395901_0037963 | 3300038443 | Bacteria | 4982 |
| 163 | Ga0395901_0125703 | 3300038443 | Bacteria | 2695 |
| 164 | Ga0395901_0240883 | 3300038443 | Bacteria | 1887 |
| 165 | Ga0400483_097459 | 3300039062 | Bacteria | 2075 |
| 166 | Ga0436365_0083543 | 3300039437 | Bacteria | 85224 |
| 167 | Ga0436365_1289865 | 3300039437 | Bacteria | 11651 |
| 168 | Ga0436361_0187698 | 3300039447 | Bacteria | 2303 |
| 169 | Ga0436363_0411622 | 3300039450 | Bacteria | 3191 |
| 170 | Ga0439462_0000983 | 3300042015 | Bacteria | 6087 |
| 171 | Ga0495648_0022760 | 3300046524 | Bacteria | 4305 |
| 172 | Ga0495625_0126809 | 3300046660 | Bacteria | 1732 |
| 173 | Ga0495625_0136297 | 3300046660 | Bacteria | 1659 |
| 174 | Ga0495669_0003545 | 3300046684 | Bacteria | 6433 |
| 175 | Ga0495671_0045033 | 3300046692 | Bacteria | 2210 |
| 176 | Ga0496100_0243201 | 3300048903 | Bacteria | 1328 |
| 177 | Ga0496102_0023308 | 3300048905 | Bacteria | 5496 |
| 178 | Ga0496103_0076156 | 3300048906 | Bacteria | 2105 |
| 179 | Ga0496106_0004392 | 3300048909 | Bacteria | 10469 |
| 180 | Ga0496107_0036680 | 3300048910 | Bacteria | 3516 |
| 181 | Ga0496108_0211116 | 3300048911 | Bacteria | 1685 |
| 182 | Ga0496109_0150171 | 3300048912 | Bacteria | 2181 |
| 183 | Ga0496109_0336992 | 3300048912 | Bacteria | 1424 |
| 184 | Ga0496110_0145243 | 3300048913 | Bacteria | 2145 |
| 185 | Ga0496111_0088279 | 3300048914 | Bacteria | 2270 |
| 186 | Ga0496112_0051345 | 3300048915 | Bacteria | 4045 |
| 187 | Ga0496113_0038009 | 3300048916 | Bacteria | 3536 |
| 188 | Ga0496113_0314354 | 3300048916 | Bacteria | 1255 |
| 189 | Ga0496115_0008750 | 3300048918 | Bacteria | 7505 |
| 190 | Ga0496115_0226247 | 3300048918 | Bacteria | 1543 |
| 191 | Ga0496116_0046502 | 3300048919 | Bacteria | 2929 |
| 192 | Ga0496116_0087818 | 3300048919 | Bacteria | 1902 |
| 193 | Ga0496117_0011384 | 3300048920 | Bacteria | 7970 |
| 194 | Ga0496118_0004288 | 3300048921 | Bacteria | 17062 |
| 195 | Ga0496119_0049941 | 3300048922 | Bacteria | 2582 |
| 196 | Ga0496119_0052016 | 3300048922 | Bacteria | 2512 |
| 197 | Ga0496121_0000035 | 3300048924 | Bacteria | 374316 |
| 198 | Ga0496125_0001209 | 3300048928 | Bacteria | 38824 |
| 199 | Ga0496125_0133415 | 3300048928 | Bacteria | 1743 |
| 200 | Ga0496126_0082029 | 3300048929 | Bacteria | 2850 |
| 201 | Ga0496126_0102400 | 3300048929 | Bacteria | 2503 |
| 202 | Ga0501033_0002814 | 3300049570 | Bacteria | 14559 |
| 203 | Ga0501033_0081269 | 3300049570 | Bacteria | 2377 |
| 204 | Ga0501034_0002944 | 3300049571 | Bacteria | 19729 |
| 205 | Ga0501034_0006355 | 3300049571 | Bacteria | 12722 |
| 206 | Ga0501034_0007932 | 3300049571 | Bacteria | 11278 |
| 207 | Ga0501034_0121522 | 3300049571 | Bacteria | 2598 |
| 208 | Ga0501034_0216663 | 3300049571 | Bacteria | 1868 |
| 209 | Ga0501037_0011531 | 3300049573 | Bacteria | 6506 |
| 210 | Ga0501068_0025655 | 3300049584 | Bacteria | 3468 |
| 211 | Ga0501070_0007823 | 3300049586 | Bacteria | 9060 |
| 212 | Ga0501070_0260487 | 3300049586 | Bacteria | 1417 |
| 213 | Ga0501073_0276717 | 3300049589 | Bacteria | 1158 |
| 214 | Ga0501080_0312172 | 3300049742 | Bacteria | 1425 |
| 215 | Ga0501044_0008351 | 3300049823 | Bacteria | 11351 |
| 216 | Ga0501044_0026794 | 3300049823 | Bacteria | 6100 |
| 217 | nmdc:mga03683_50475_c1 | 3300050489 | Bacteria | 1734 |
| 218 | nmdc:mga0yw44_16674_c1 | 3300050492 | Bacteria | 3976 |
| 219 | nmdc:mga0k408_35276_c1 | 3300050493 | Bacteria | 2868 |
| 220 | nmdc:mga06z11_65546_c1 | 3300050494 | Bacteria | 1906 |
| 221 | nmdc:mga05p37_264906_c1 | 3300050507 | Bacteria | 2055 |
| 222 | nmdc:mga0qj67_33636_c1 | 3300050509 | Bacteria | 4000 |
| 223 | nmdc:mga0sz30_754_c1 | 3300050516 | Bacteria | 11824 |
| 224 | nmdc:mga0sz30_95649_c1 | 3300050516 | Bacteria | 1295 |
| 225 | Ga0500643_000005 | 3300053087 | Bacteria | 539775 |
| 226 | Ga0500643_026786 | 3300053087 | Bacteria | 1800 |
| 227 | Ga0500644_0000819 | 3300053088 | Bacteria | 10501 |
| 228 | Ga0500651_0016706 | 3300053093 | Bacteria | 4517 |
| 229 | Ga0500641_0006433 | 3300053096 | Bacteria | 4171 |
| 230 | Ga0500595_021038 | 3300053119 | Bacteria | 2336 |
| 231 | Ga0500608_000334 | 3300053122 | Bacteria | 18157 |
| 232 | Ga0500642_0002698 | 3300053130 | Bacteria | 5254 |
| 233 | Ga0500559_0000042 | 3300053136 | Bacteria | 101570 |
| 234 | Ga0500564_001628 | 3300053138 | Bacteria | 7892 |
| 235 | Ga0500573_0000044 | 3300053140 | Bacteria | 101776 |
| 236 | Ga0500573_0023979 | 3300053140 | Bacteria | 3506 |
| 237 | Ga0500616_0003532 | 3300053153 | Bacteria | 11874 |
| 238 | Ga0500616_0008338 | 3300053153 | Bacteria | 6447 |
| 239 | Ga0500622_0018883 | 3300053156 | Bacteria | 3663 |
| 240 | Ga0500567_000030 | 3300053723 | Bacteria | 30021 |
| 241 | Ga0500625_000011 | 3300053729 | Bacteria | 133655 |
| 242 | Ga0500645_025443 | 3300053730 | Bacteria | 1806 |
| 243 | Ga0500552_000276 | 3300053733 | Bacteria | 4658 |
| 244 | 2643884047 | 2643221574 | Bacteria | 2789653 |
| 245 | 2644353318 | 2643221663 | Bacteria | 3425771 |
| 246 | 2644549842 | 2643221699 | Bacteria | 5731501 |
| 247 | 2644551327 | 2643221699 | Bacteria | 5731501 |
| 248 | 2739651009 | 2739367664 | Bacteria | 4114334 |
| 249 | 2740029482 | 2739367865 | Bacteria | 4114482 |
| 250 | 2842696617 | 2842694124 | Bacteria | 4063419 |
| 251 | 2855020602 | 2855020534 | Bacteria | 3204685 |
| 252 | 2882809253 | 2882806704 | Bacteria | 3007728 |
| 253 | 2883296453 | 2883291878 | Bacteria | 5894118 |
| 254 | 2883579589 | 2883577096 | Bacteria | 4709178 |
| 255 | 2941489249 | 2941485952 | Bacteria | 3591484 |
| 256 | 3000867378 | 3000865235 | Bacteria | 3106258 |
| 257 | Ga0075367_10039439 | |||
| 258 | Ga0055536_1000251 | |||
| 259 | Ga0055536_1001930 | |||
| 260 | Ga0055531_10017070 | |||
| 261 | Ga0070658_10001686 | |||
| 262 | Ga0070658_10233539 | |||
| 263 | Ga0070683_100026552 | |||
| 264 | Ga0070666_10016565 | |||
| 265 | Ga0070680_100000527 | |||
| 266 | Ga0070660_100008695 | |||
| 267 | Ga0070660_100279965 | |||
| 268 | Ga0070689_100277644 | |||
| 269 | Ga0070691_10002892 | |||
| 270 | Ga0070661_100097139 | |||
| 271 | Ga0070692_10007884 | |||
| 272 | Ga0070668_100029061 | |||
| 273 | Ga0070669_100000280 | |||
| 274 | Ga0070675_100183551 | |||
| 275 | Ga0070675_100220657 | |||
| 276 | Ga0070671_100000005 | |||
| 277 | Ga0070671_100002548 | |||
| 278 | Ga0070673_100261111 | |||
| 279 | Ga0070659_100006630 | |||
| 280 | Ga0070659_100059973 | |||
| 281 | Ga0070667_100000131 | |||
| 282 | Ga0070667_100022870 | |||
| 283 | Ga0070663_100262983 | |||
| 284 | Ga0070681_10002682 | |||
| 285 | Ga0070681_10253178 | |||
| 286 | Ga0070706_100268366 | |||
| 287 | Ga0070698_100000125 | |||
| 288 | Ga0070679_100000001 | |||
| 289 | Ga0070679_100001997 | |||
| 290 | Ga0070684_100029837 | |||
| 291 | Ga0070684_100315073 | |||
| 292 | Ga0070697_100219564 | |||
| 293 | Ga0070686_100069140 | |||
| 294 | Ga0068855_100003418 | |||
| 295 | Ga0068855_100021206 | |||
| 296 | Ga0068855_100034629 | |||
| 297 | Ga0068855_100101379 | |||
| 298 | Ga0068855_100221730 | |||
| 299 | Ga0070664_100006112 | |||
| 300 | Ga0068854_100000420 | |||
| 301 | Ga0068854_100188070 | |||
| 302 | Ga0068856_100384233 | |||
| 303 | Ga0068852_100000174 | |||
| 304 | Ga0068852_100112147 | |||
| 305 | Ga0068852_100144410 | |||
| 306 | Ga0068859_100124617 | |||
| 307 | Ga0068864_100026919 | |||
| 308 | Ga0068864_100047066 | |||
| 309 | Ga0068858_100001280 | |||
| 310 | Ga0068858_100014074 | |||
| 311 | Ga0081455_10001258 | |||
| 312 | Ga0081455_10005742 | |||
| 313 | Ga0081455_10031233 | |||
| 314 | Ga0081539_10005967 | |||
| 315 | Ga0081539_10008345 | |||
| 316 | Ga0075365_10009106 | |||
| 317 | Ga0075365_10226652 | |||
| 318 | Ga0075369_10019471 | |||
| 319 | Ga0097620_100124624 | |||
| 320 | Ga0105240_10002147 | |||
| 321 | Ga0105240_10043912 | |||
| 322 | Ga0105242_10103475 | |||
| 323 | Ga0105248_10003656 | |||
| 324 | Ga0105248_10011608 | |||
| 325 | Ga0105248_10092005 | |||
| 326 | Ga0105248_10236848 | |||
| 327 | Ga0105237_10184456 | |||
| 328 | Ga0105238_10061368 | |||
| 329 | Ga0157373_10000049 | |||
| 330 | Ga0157373_10000516 | |||
| 331 | Ga0157371_10042122 | |||
| 332 | Ga0157370_10086266 | |||
| 333 | Ga0157369_10013841 | |||
| 334 | Ga0157369_10113083 | |||
| 335 | Ga0157369_10547605 | |||
| 336 | Ga0163162_10148842 | |||
| 337 | Ga0157380_10193500 | |||
| 338 | Ga0213876_10000371 | |||
| 339 | Ga0213876_10010701 | |||
| 340 | Ga0209676_1000038 | |||
| 341 | Ga0209050_1011400 | |||
| 342 | Ga0207426_1014165 | |||
| 343 | Ga0209257_1000433 | |||
| 344 | Ga0207680_10027886 | |||
| 345 | Ga0207647_10011663 | |||
| 346 | Ga0207647_10158468 | |||
| 347 | Ga0207705_10000007 | |||
| 348 | Ga0207684_10158591 | |||
| 349 | Ga0207707_10030410 | |||
| 350 | Ga0207695_10001471 | |||
| 351 | Ga0207695_10113426 | |||
| 352 | Ga0207671_10101731 | |||
| 353 | Ga0207660_10000421 | |||
| 354 | Ga0207657_10016468 | |||
| 355 | Ga0207652_10000002 | |||
| 356 | Ga0207652_10032595 | |||
| 357 | Ga0207681_10000096 | |||
| 358 | Ga0207659_10342888 | |||
| 359 | Ga0207700_10341448 | |||
| 360 | Ga0207644_10000008 | |||
| 361 | Ga0207690_10001808 | |||
| 362 | Ga0207690_10049455 | |||
| 363 | Ga0207686_10058832 | |||
| 364 | Ga0207670_10250479 | |||
| 365 | Ga0207711_10030112 | |||
| 366 | Ga0207679_10016781 | |||
| 367 | Ga0207667_10029691 | |||
| 368 | Ga0207667_10042090 | |||
| 369 | Ga0207667_10047869 | |||
| 370 | Ga0207667_10063210 | |||
| 371 | Ga0207667_10130875 | |||
| 372 | Ga0207668_10123404 | |||
| 373 | Ga0207640_10002296 | |||
| 374 | Ga0207658_10241705 | |||
| 375 | Ga0207703_10002081 | |||
| 376 | Ga0207703_10017206 | |||
| 377 | Ga0207639_10193857 | |||
| 378 | Ga0207678_10300764 | |||
| 379 | Ga0207702_10007285 | |||
| 380 | Ga0207702_10284090 | |||
| 381 | Ga0207641_10088650 | |||
| 382 | Ga0207676_10041253 | |||
| 383 | Ga0207698_10000098 | |||
| 384 | Ga0268266_10088560 | |||
| 385 | Ga0268265_10213342 | |||
| 386 | Ga0265338_10040865 | |||
| 387 | Ga0316178_1049905 | |||
| 388 | Ga0265320_10001230 | |||
| 389 | Ga0265339_10041813 | |||
| 390 | Ga0265327_10000794 | |||
| 391 | Ga0316579_10032429 | |||
| 392 | Ga0265314_10007961 | |||
| 393 | Ga0307405_10046018 | |||
| 394 | Ga0307413_10070293 | |||
| 395 | Ga0307413_10077416 | |||
| 396 | Ga0307410_10267207 | |||
| 397 | Ga0307412_10016565 | |||
| 398 | Ga0307416_100470523 | |||
| 399 | Ga0307416_100490294 | |||
| 400 | Ga0307414_10015374 | |||
| 401 | Ga0307414_10031560 | |||
| 402 | Ga0307414_10121555 | |||
| 403 | Ga0307414_10457112 | |||
| 404 | Ga0307411_10121396 | |||
| 405 | Ga0373931_0051338 | |||
| 406 | Ga0373927_0000260 | |||
| 407 | Ga0373927_0109575 | |||
| 408 | Ga0316582_0037652 | |||
| 409 | Ga0316584_0080705 | |||
| 410 | Ga0395899_0013106 | |||
| 411 | Ga0395900_0002661 | |||
| 412 | Ga0395900_0019217 | |||
| 413 | Ga0395898_0013304 | |||
| 414 | Ga0395905_0012607 | |||
| 415 | Ga0395901_0001490 | |||
| 416 | Ga0395901_0003211 | |||
| 417 | Ga0395901_0016579 | |||
| 418 | Ga0395901_0037963 | |||
| 419 | Ga0395901_0125703 | |||
| 420 | Ga0395901_0240883 | |||
| 421 | Ga0400483_097459 | |||
| 422 | Ga0436365_0083543 | |||
| 423 | Ga0436365_1289865 | |||
| 424 | Ga0436361_0187698 | |||
| 425 | Ga0436363_0411622 | |||
| 426 | Ga0439462_0000983 | |||
| 427 | Ga0495648_0022760 | |||
| 428 | Ga0495625_0126809 | |||
| 429 | Ga0495625_0136297 | |||
| 430 | Ga0495669_0003545 | |||
| 431 | Ga0495671_0045033 | |||
| 432 | Ga0496100_0243201 | |||
| 433 | Ga0496102_0023308 | |||
| 434 | Ga0496103_0076156 | |||
| 435 | Ga0496106_0004392 | |||
| 436 | Ga0496107_0036680 | |||
| 437 | Ga0496108_0211116 | |||
| 438 | Ga0496109_0150171 | |||
| 439 | Ga0496109_0336992 | |||
| 440 | Ga0496110_0145243 | |||
| 441 | Ga0496111_0088279 | |||
| 442 | Ga0496112_0051345 | |||
| 443 | Ga0496113_0038009 | |||
| 444 | Ga0496113_0314354 | |||
| 445 | Ga0496115_0008750 | |||
| 446 | Ga0496115_0226247 | |||
| 447 | Ga0496116_0046502 | |||
| 448 | Ga0496116_0087818 | |||
| 449 | Ga0496117_0011384 | |||
| 450 | Ga0496118_0004288 | |||
| 451 | Ga0496119_0049941 | |||
| 452 | Ga0496119_0052016 | |||
| 453 | Ga0496121_0000035 | |||
| 454 | Ga0496125_0001209 | |||
| 455 | Ga0496125_0133415 | |||
| 456 | Ga0496126_0082029 | |||
| 457 | Ga0496126_0102400 | |||
| 458 | Ga0501033_0002814 | |||
| 459 | Ga0501033_0081269 | |||
| 460 | Ga0501034_0002944 | |||
| 461 | Ga0501034_0006355 | |||
| 462 | Ga0501034_0007932 | |||
| 463 | Ga0501034_0121522 | |||
| 464 | Ga0501034_0216663 | |||
| 465 | Ga0501037_0011531 | |||
| 466 | Ga0501068_0025655 | |||
| 467 | Ga0501070_0007823 | |||
| 468 | Ga0501070_0260487 | |||
| 469 | Ga0501073_0276717 | |||
| 470 | Ga0501080_0312172 | |||
| 471 | Ga0501044_0008351 | |||
| 472 | Ga0501044_0026794 | |||
| 473 | nmdc:mga03683_50475_c1 | |||
| 474 | nmdc:mga0yw44_16674_c1 | |||
| 475 | nmdc:mga0k408_35276_c1 | |||
| 476 | nmdc:mga06z11_65546_c1 | |||
| 477 | nmdc:mga05p37_264906_c1 | |||
| 478 | nmdc:mga0qj67_33636_c1 | |||
| 479 | nmdc:mga0sz30_754_c1 | |||
| 480 | nmdc:mga0sz30_95649_c1 | |||
| 481 | Ga0500643_000005 | |||
| 482 | Ga0500643_026786 | |||
| 483 | Ga0500644_0000819 | |||
| 484 | Ga0500651_0016706 | |||
| 485 | Ga0500641_0006433 | |||
| 486 | Ga0500595_021038 | |||
| 487 | Ga0500608_000334 | |||
| 488 | Ga0500642_0002698 | |||
| 489 | Ga0500559_0000042 | |||
| 490 | Ga0500564_001628 | |||
| 491 | Ga0500573_0000044 | |||
| 492 | Ga0500573_0023979 | |||
| 493 | Ga0500616_0003532 | |||
| 494 | Ga0500616_0008338 | |||
| 495 | Ga0500622_0018883 | |||
| 496 | Ga0500567_000030 | |||
| 497 | Ga0500625_000011 | |||
| 498 | Ga0500645_025443 | |||
| 499 | Ga0500552_000276 | |||
| 500 | 2643884047 | |||
| 501 | 2644353318 | |||
| 502 | 2644549842 | |||
| 503 | 2644551327 | |||
| 504 | 2739651009 | |||
| 505 | 2740029482 | |||
| 506 | 2842696617 | |||
| 507 | 2855020602 | |||
| 508 | 2882809253 | |||
| 509 | 2883296453 | |||
| 510 | 2883579589 | |||
| 511 | 2941489249 | |||
| 512 | 3000867378 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6syp-assembly1.cif.gz_AAA | human dhodh bound to inhibitor ipp/cnrs-a017 | 0.9691 | 14 | 344 |
| 6et4-assembly1.cif.gz_A | human dihydroorotate dehydrogenase in complex with novel inhibitor | 0.9648 | 9 | 343 |
| 3f1q-assembly1.cif.gz_A | human dihydroorotate dehydrogenase in complex with a leflunomide derivative inhibitor 1 | 0.9639 | 8 | 343 |
| 3zws-assembly1.cif.gz_A | structure of human dihydroorotate dehydrogenase with a bound inhibitor | 0.9633 | 6 | 343 |
| 2fqi-assembly1.cif.gz_A | dual binding modes of a novel series of dhodh inhibitors | 0.9633 | 6 | 343 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3w7rA00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.963 | 7 | 343 | 3.20.20.70 |
| af_P0A7E1_1_336_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9625 | 6 | 321 | 3.20.20.70 |
| af_Q2FV30_1_354_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9515 | 3 | 345 | 3.20.20.70 |
| af_P32747_61_443_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9502 | 4 | 345 | 3.20.20.70 |
| af_Q874I4_58_444_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9469 | 1 | 343 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4P8QC41-F1-model_v4 | Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) | 0.9961 | 1 | 345 |
GO:0005737
GO:0006207 GO:0016020 GO:0044205 GO:0106430 |
| AF-A0A4P8QC41-F1-model_v4 | Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) | 0.9932 | 1 | 345 |
GO:0005737
GO:0006207 GO:0016020 GO:0044205 GO:0106430 |
| AF-A0A069ILD4-F1-model_v4 | Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) | 0.9906 | 1 | 185 |
GO:0005737
GO:0006207 GO:0016020 GO:0044205 GO:0106430 |
| AF-A0A848TNV1-F1-model_v4 | Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2) | 0.9874 | 95 | 344 |
GO:0004152
GO:0005737 GO:0006207 GO:0016020 GO:0044205 |
| AF-A0A3B9V6S3-F1-model_v4 | Quinone-dependent dihydroorotate dehydrogenase | 0.9868 | 256 | 343 |
GO:0004152
GO:0005737 GO:0006207 GO:0044205 |