F366776

General Info

Members Datasets Scaffolds Average Seq Length
256 177 512 262

Family's Representative Sequence

Representative Sequence 3300046681|Ga0495647_0023409|Ga0495647_0023409_147_1061
Length 304
Sequence MSTPLRTNTNTSARRDDPQAAPGSRPKLRVENLHKSFDTKKVLDGVTFSVADGESLVIVGPSGTGKSVLLKHLIGVIRPDSGKVFVDGVDVWSISDRERNDVRKEFGMAFQEGALFDSMSVFDNVAFPLRRSGRPAREVAKRVRECLDIVHLPNIENRRPSELSGGMRRRVGFARAIAHQPDILLFDEPNTGLDPIMTDVIDDVILNMRERLNATIVTITHHMQSAEKIGDRVALLYGGKILFEAPPKEFLHSDNAAVRQFVEGRAEGPLTPEGQVVGRRTTGGTRIVDPGKDRAEGPGLKDQG

Samples

Sample ID Description Type Environment
1 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
105 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
106 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
107 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
108 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
109 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
110 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
111 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
112 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
113 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
114 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
115 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
116 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
122 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
123 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
124 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
125 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
128 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
131 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
132 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
133 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
134 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
135 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
141 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
144 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
147 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
148 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
149 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
150 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
151 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
152 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
163 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
164 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
176 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
177 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.83
Metatranscriptomes 0.39
Isolates 0.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.95
Nodule 0
Rhizoplane 0.78
Rhizosphere 93.36
Stem 0
Stem Tuber 0
Unclassified 0.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495647_0023409 3300046681 Bacteria 2239
2 JGI25159J45721_1014198 3300002987 Bacteria 1808
3 JGI25151J46595_10000192 3300003187 Bacteria 75239
4 JGI25153J46596_10051385 3300003215 Bacteria 1180
5 Ga0065714_10082050 3300005288 Bacteria 2333
6 Ga0065712_10002556 3300005290 Bacteria 4389
7 Ga0065715_10025532 3300005293 Bacteria 1371
8 Ga0070658_10010617 3300005327 Bacteria 7378
9 Ga0068869_100073356 3300005334 Bacteria 2537
10 Ga0070666_10133545 3300005335 Bacteria 1726
11 Ga0070680_100000201 3300005336 Bacteria 38933
12 Ga0070680_100000264 3300005336 Bacteria 34683
13 Ga0070680_100042329 3300005336 Bacteria 3695
14 Ga0068868_100043994 3300005338 Bacteria 3489
15 Ga0070661_100011239 3300005344 Bacteria 6238
16 Ga0070692_10000444 3300005345 Bacteria 12606
17 Ga0070668_100330078 3300005347 Bacteria 1286
18 Ga0070675_100022087 3300005354 Bacteria 5084
19 Ga0070675_100042986 3300005354 Bacteria 3691
20 Ga0070671_100162987 3300005355 Bacteria 1884
21 Ga0070671_100312531 3300005355 Bacteria 1338
22 Ga0070673_100054484 3300005364 Bacteria 3146
23 Ga0070673_100132309 3300005364 Bacteria 2095
24 Ga0070688_100011963 3300005365 Bacteria 4847
25 Ga0070667_100041421 3300005367 Bacteria 3864
26 Ga0070667_100389429 3300005367 Bacteria 1267
27 Ga0070714_100006936 3300005435 Bacteria 8781
28 Ga0070714_100052529 3300005435 Bacteria 3476
29 Ga0070714_100496492 3300005435 Bacteria 1164
30 Ga0070713_100417316 3300005436 Bacteria 1256
31 Ga0070701_10025911 3300005438 Bacteria 2853
32 Ga0070711_100145893 3300005439 Bacteria 1780
33 Ga0070694_100010855 3300005444 Bacteria 5635
34 Ga0070708_100056570 3300005445 Bacteria 3489
35 Ga0070708_100208047 3300005445 Unclassified 1833
36 Ga0070708_100458456 3300005445 Bacteria 1203
37 Ga0070681_10000213 3300005458 Bacteria 45271
38 Ga0068867_100018140 3300005459 Bacteria 5001
39 Ga0070685_10026139 3300005466 Bacteria 3215
40 Ga0070706_100001724 3300005467 Bacteria 22706
41 Ga0070706_100053565 3300005467 Bacteria 3724
42 Ga0070706_100071708 3300005467 Bacteria 3204
43 Ga0070706_100145319 3300005467 Bacteria 2214
44 Ga0070707_100064833 3300005468 Bacteria 3508
45 Ga0070707_100073008 3300005468 Bacteria 3308
46 Ga0070707_100087443 3300005468 Bacteria 3014
47 Ga0070698_100000094 3300005471 Bacteria 71206
48 Ga0070698_100102495 3300005471 Bacteria 2833
49 Ga0070699_100133316 3300005518 Unclassified 2191
50 Ga0070699_100211034 3300005518 Bacteria 1728
51 Ga0070679_100001596 3300005530 Bacteria 20324
52 Ga0070697_100001157 3300005536 Bacteria 19977
53 Ga0070697_100209770 3300005536 Bacteria 1658
54 Ga0070672_100039911 3300005543 Bacteria 3599
55 Ga0070672_100248245 3300005543 Bacteria 1498
56 Ga0070695_100023301 3300005545 Bacteria 3803
57 Ga0070665_100596213 3300005548 Bacteria 1118
58 Ga0070704_100026858 3300005549 Bacteria 3810
59 Ga0068855_100001693 3300005563 Bacteria 27587
60 Ga0068855_100399279 3300005563 Bacteria 1507
61 Ga0068857_100028956 3300005577 Bacteria 4888
62 Ga0068854_100131122 3300005578 Bacteria 1914
63 Ga0068859_100068559 3300005617 Bacteria 3582
64 Ga0068864_100003017 3300005618 Bacteria 13913
65 Ga0068864_100880918 3300005618 Bacteria 883
66 Ga0068863_100056146 3300005841 Bacteria 3728
67 Ga0068858_100241618 3300005842 Bacteria 1714
68 Ga0068860_100015295 3300005843 Bacteria 7494
69 Ga0068862_100004712 3300005844 Bacteria 11487
70 Ga0081538_10013120 3300005981 Bacteria 6582
71 Ga0097621_100102420 3300006237 Bacteria 2410
72 Ga0097621_100806685 3300006237 Bacteria 870
73 Ga0068871_100098129 3300006358 Bacteria 2451
74 Ga0075433_10045607 3300006852 Bacteria 3811
75 Ga0075434_100044176 3300006871 Bacteria 4421
76 Ga0097620_100068560 3300006931 Bacteria 3582
77 Ga0075435_100078461 3300007076 Bacteria 2708
78 Ga0075435_100232302 3300007076 Bacteria 1567
79 Ga0105240_10016423 3300009093 Bacteria 10022
80 Ga0105240_10845099 3300009093 Bacteria 988
81 Ga0111539_10127474 3300009094 Bacteria 2981
82 Ga0114129_10001753 3300009147 Bacteria 29543
83 Ga0114129_10002268 3300009147 Bacteria 26611
84 Ga0105243_10446583 3300009148 Bacteria 1212
85 Ga0105242_10081990 3300009176 Bacteria 2699
86 Ga0105248_10000001 3300009177 Bacteria 1881304
87 Ga0105237_10139699 3300009545 Bacteria 2416
88 Ga0105238_10010958 3300009551 Bacteria 9118
89 Ga0105238_10305692 3300009551 Bacteria 1574
90 Ga0105033_100352 3300009986 Bacteria 3551
91 Ga0105239_10546633 3300010375 Bacteria 1319
92 Ga0105239_11249056 3300010375 Bacteria 856
93 Ga0157374_10394079 3300013296 Bacteria 1381
94 Ga0163162_10025265 3300013306 Bacteria 5869
95 Ga0163162_10353144 3300013306 Bacteria 1603
96 Ga0157372_10409932 3300013307 Bacteria 1579
97 Ga0157375_11222149 3300013308 Bacteria 882
98 Ga0163163_10056968 3300014325 Bacteria 3864
99 Ga0157380_10148512 3300014326 Bacteria 2023
100 Ga0157380_10277473 3300014326 Bacteria 1531
101 Ga0157376_10242953 3300014969 Bacteria 1678
102 Ga0157376_10497536 3300014969 Bacteria 1197
103 Ga0206353_10102630 3300020082 Bacteria 1044
104 Ga0213876_10000469 3300021384 Bacteria 32156
105 Ga0213876_10000586 3300021384 Bacteria 27090
106 Ga0209025_1000077 3300025294 Bacteria 271958
107 Ga0209758_1001357 3300025297 Bacteria 29357
108 Ga0207680_10081144 3300025903 Bacteria 2038
109 Ga0207699_10386794 3300025906 Bacteria 994
110 Ga0207643_10024091 3300025908 Bacteria 3359
111 Ga0207705_10006356 3300025909 Bacteria 8763
112 Ga0207684_10007180 3300025910 Bacteria 10070
113 Ga0207684_10008548 3300025910 Bacteria 9108
114 Ga0207684_10013418 3300025910 Bacteria 7089
115 Ga0207684_10034079 3300025910 Bacteria 4328
116 Ga0207684_10034281 3300025910 Bacteria 4314
117 Ga0207695_10033050 3300025913 Bacteria 5651
118 Ga0207646_10113114 3300025922 Bacteria 2437
119 Ga0207646_10152552 3300025922 Bacteria 2083
120 Ga0207650_10399685 3300025925 Bacteria 1137
121 Ga0207659_10079956 3300025926 Bacteria 2414
122 Ga0207659_10462433 3300025926 Bacteria 1070
123 Ga0207700_10109795 3300025928 Bacteria 2217
124 Ga0207709_10531255 3300025935 Bacteria 922
125 Ga0207704_10359756 3300025938 Bacteria 1136
126 Ga0207691_10012120 3300025940 Bacteria 8265
127 Ga0207691_10072755 3300025940 Bacteria 3101
128 Ga0207711_10000002 3300025941 Bacteria 1228676
129 Ga0207711_10112070 3300025941 Bacteria 2427
130 Ga0207689_10042197 3300025942 Bacteria 3775
131 Ga0207689_10073273 3300025942 Bacteria 2813
132 Ga0207689_10537012 3300025942 Bacteria 982
133 Ga0207679_10195411 3300025945 Bacteria 1686
134 Ga0207667_10024236 3300025949 Bacteria 6667
135 Ga0207651_10244614 3300025960 Bacteria 1464
136 Ga0207651_10346958 3300025960 Bacteria 1249
137 Ga0207658_10034002 3300025986 Bacteria 3640
138 Ga0207703_10480143 3300026035 Bacteria 1164
139 Ga0207648_10139093 3300026089 Bacteria 2140
140 Ga0207676_10783973 3300026095 Bacteria 929
141 Ga0207674_10013466 3300026116 Bacteria 9073
142 Ga0207683_10006800 3300026121 Bacteria 9793
143 Ga0209983_1000537 3300027665 Bacteria 8176
144 Ga0209998_10012943 3300027717 Bacteria 1734
145 Ga0209974_10002957 3300027876 Bacteria 6169
146 Ga0265337_1003661 3300028556 Bacteria 6589
147 Ga0265334_10003731 3300028573 Bacteria 6889
148 Ga0265322_10001609 3300028654 Bacteria 7215
149 Ga0265338_10000006 3300028800 Bacteria 570804
150 Ga0265338_10008553 3300028800 Bacteria 12393
151 Ga0265338_10158821 3300028800 Bacteria 1748
152 Ga0265332_10036823 3300031238 Bacteria 2123
153 Ga0265325_10000007 3300031241 Bacteria 208874
154 Ga0265325_10000325 3300031241 Bacteria 33683
155 Ga0265329_10020644 3300031242 Bacteria 2221
156 Ga0265340_10044697 3300031247 Bacteria 2167
157 Ga0265340_10067566 3300031247 Bacteria 1699
158 Ga0265339_10001769 3300031249 Bacteria 15891
159 Ga0265331_10000006 3300031250 Bacteria 418907
160 Ga0265316_10018163 3300031344 Bacteria 6053
161 Ga0265316_10021286 3300031344 Bacteria 5497
162 Ga0265316_10466764 3300031344 Bacteria 904
163 Ga0265313_10002331 3300031595 Bacteria 16628
164 Ga0265313_10033777 3300031595 Bacteria 2595
165 Ga0316575_10050070 3300031665 Bacteria 1663
166 Ga0316575_10087102 3300031665 Bacteria 1262
167 Ga0265314_10015969 3300031711 Bacteria 5945
168 Ga0265314_10058406 3300031711 Bacteria 2643
169 Ga0265314_10148152 3300031711 Bacteria 1442
170 Ga0265342_10000134 3300031712 Bacteria 82702
171 Ga0265342_10024454 3300031712 Bacteria 3812
172 Ga0307406_10139335 3300031901 Bacteria 1715
173 Ga0307409_100025241 3300031995 Bacteria 4164
174 Ga0316583_10017991 3300032133 Bacteria 2538
175 Ga0373928_0040911 3300035084 Bacteria 1064
176 Ga0373939_0010916 3300035114 Bacteria 2282
177 Ga0373943_0008087 3300035170 Bacteria 4717
178 Ga0373943_0072828 3300035170 Bacteria 1743
179 Ga0373943_0206743 3300035170 Bacteria 1089
180 Ga0373924_0077845 3300035410 Bacteria 1407
181 Ga0373935_0024793 3300035692 Bacteria 3694
182 Ga0373927_0110096 3300035695 Bacteria 1794
183 Ga0373927_0220139 3300035695 Bacteria 1247
184 Ga0373933_0028923 3300035724 Bacteria 3200
185 Ga0373947_0109165 3300035725 Bacteria 1746
186 Ga0373925_0027776 3300037068 Bacteria 4142
187 Ga0400483_262812 3300039062 Bacteria 2468
188 Ga0436365_0073850 3300039437 Bacteria 40161
189 Ga0436365_0508484 3300039437 Bacteria 190091
190 Ga0436365_1535986 3300039437 Bacteria 4481
191 Ga0436363_0076334 3300039450 Bacteria 1773
192 Ga0436363_1276710 3300039450 Bacteria 1689
193 Ga0436362_0024229 3300039453 Bacteria 1063
194 Ga0436362_0510521 3300039453 Bacteria 1204
195 Ga0439445_0026139 3300042004 Bacteria 1493
196 Ga0451577_0000074 3300042876 Bacteria 232698
197 Ga0451577_0001331 3300042876 Bacteria 33593
198 Ga0451577_0002926 3300042876 Bacteria 19573
199 Ga0451577_0009442 3300042876 Bacteria 9398
200 Ga0451577_0342043 3300042876 Bacteria 1357
201 Ga0453683_0213309 3300044673 Bacteria 1227
202 Ga0453684_0000446 3300044712 Bacteria 166828
203 Ga0453684_0001299 3300044712 Bacteria 74288
204 Ga0453684_0005537 3300044712 Bacteria 24925
205 Ga0453684_0011728 3300044712 Bacteria 14612
206 Ga0453684_0052159 3300044712 Bacteria 5353
207 Ga0451576_0000537 3300045051 Bacteria 81691
208 Ga0451576_0000797 3300045051 Bacteria 61704
209 Ga0451576_0051154 3300045051 Bacteria 4331
210 Ga0451576_0307207 3300045051 Bacteria 1659
211 Ga0495629_0035862 3300046459 Bacteria 3504
212 Ga0495651_0066637 3300046462 Bacteria 2748
213 Ga0495582_0017088 3300046473 Bacteria 3971
214 Ga0495662_0084275 3300046476 Bacteria 1547
215 Ga0495610_0059800 3300046512 Bacteria 1817
216 Ga0495628_0286148 3300046516 Bacteria 1223
217 Ga0495630_0038495 3300046517 Bacteria 3577
218 Ga0495652_0243755 3300046529 Bacteria 1336
219 Ga0495586_0005415 3300046535 Bacteria 6825
220 Ga0495647_0005396 3300046681 Bacteria 4185
221 Ga0495658_0075755 3300046683 Bacteria 1964
222 Ga0495613_0242473 3300046689 Bacteria 1260
223 Ga0495649_0173356 3300046694 Bacteria 1128
224 Ga0495589_0037736 3300046794 Bacteria 2420
225 Ga0495602_0122137 3300048088 Bacteria 2094
226 Ga0496106_0061364 3300048909 Bacteria 2852
227 Ga0496107_0071511 3300048910 Bacteria 2521
228 Ga0501032_0000346 3300049569 Bacteria 38804
229 Ga0501034_0000001 3300049571 Bacteria 2184493
230 Ga0501034_0024748 3300049571 Bacteria 6108
231 Ga0501034_0217453 3300049571 Bacteria 1864
232 Ga0501036_0001170 3300049572 Bacteria 19960
233 Ga0501043_0060885 3300049579 Bacteria 2964
234 Ga0501046_0479059 3300049580 Bacteria 893
235 Ga0501047_0006146 3300049581 Bacteria 11288
236 Ga0501047_0250437 3300049581 Bacteria 1620
237 Ga0501047_0447095 3300049581 Bacteria 1122
238 Ga0501067_0007275 3300049583 Bacteria 6146
239 Ga0501072_0168356 3300049588 Bacteria 1748
240 Ga0501074_0072198 3300049590 Bacteria 2480
241 Ga0501074_0095157 3300049590 Bacteria 2133
242 Ga0501075_0458579 3300049591 Bacteria 972
243 Ga0501079_0124211 3300049741 Bacteria 2008
244 Ga0501080_0354889 3300049742 Bacteria 1323
245 Ga0501081_0024955 3300049743 Bacteria 4019
246 Ga0501044_0162488 3300049823 Bacteria 2209
247 Ga0501044_0216361 3300049823 Bacteria 1868
248 nmdc:mga05p37_68616_c1 3300050507 Bacteria 4360
249 nmdc:mga05p37_96161_c1 3300050507 Bacteria 3649
250 nmdc:mga0n895_79956_c1 3300050512 Bacteria 3256
251 nmdc:mga0rr50_76054_c1 3300050513 Bacteria 2576
252 nmdc:mga0a205_30159_c1 3300050515 Bacteria 3013
253 Ga0501082_0045522 3300060353 Bacteria 3784
254 Ga0530510_0276284 3300061734 Bacteria 1254
255 2523102308 2522572158 Bacteria 6514390
256 8054007916 8054002106 Bacteria 7987183
257 Ga0495647_0023409
258 JGI25159J45721_1014198
259 JGI25151J46595_10000192
260 JGI25153J46596_10051385
261 Ga0065714_10082050
262 Ga0065712_10002556
263 Ga0065715_10025532
264 Ga0070658_10010617
265 Ga0068869_100073356
266 Ga0070666_10133545
267 Ga0070680_100000201
268 Ga0070680_100000264
269 Ga0070680_100042329
270 Ga0068868_100043994
271 Ga0070661_100011239
272 Ga0070692_10000444
273 Ga0070668_100330078
274 Ga0070675_100022087
275 Ga0070675_100042986
276 Ga0070671_100162987
277 Ga0070671_100312531
278 Ga0070673_100054484
279 Ga0070673_100132309
280 Ga0070688_100011963
281 Ga0070667_100041421
282 Ga0070667_100389429
283 Ga0070714_100006936
284 Ga0070714_100052529
285 Ga0070714_100496492
286 Ga0070713_100417316
287 Ga0070701_10025911
288 Ga0070711_100145893
289 Ga0070694_100010855
290 Ga0070708_100056570
291 Ga0070708_100208047
292 Ga0070708_100458456
293 Ga0070681_10000213
294 Ga0068867_100018140
295 Ga0070685_10026139
296 Ga0070706_100001724
297 Ga0070706_100053565
298 Ga0070706_100071708
299 Ga0070706_100145319
300 Ga0070707_100064833
301 Ga0070707_100073008
302 Ga0070707_100087443
303 Ga0070698_100000094
304 Ga0070698_100102495
305 Ga0070699_100133316
306 Ga0070699_100211034
307 Ga0070679_100001596
308 Ga0070697_100001157
309 Ga0070697_100209770
310 Ga0070672_100039911
311 Ga0070672_100248245
312 Ga0070695_100023301
313 Ga0070665_100596213
314 Ga0070704_100026858
315 Ga0068855_100001693
316 Ga0068855_100399279
317 Ga0068857_100028956
318 Ga0068854_100131122
319 Ga0068859_100068559
320 Ga0068864_100003017
321 Ga0068864_100880918
322 Ga0068863_100056146
323 Ga0068858_100241618
324 Ga0068860_100015295
325 Ga0068862_100004712
326 Ga0081538_10013120
327 Ga0097621_100102420
328 Ga0097621_100806685
329 Ga0068871_100098129
330 Ga0075433_10045607
331 Ga0075434_100044176
332 Ga0097620_100068560
333 Ga0075435_100078461
334 Ga0075435_100232302
335 Ga0105240_10016423
336 Ga0105240_10845099
337 Ga0111539_10127474
338 Ga0114129_10001753
339 Ga0114129_10002268
340 Ga0105243_10446583
341 Ga0105242_10081990
342 Ga0105248_10000001
343 Ga0105237_10139699
344 Ga0105238_10010958
345 Ga0105238_10305692
346 Ga0105033_100352
347 Ga0105239_10546633
348 Ga0105239_11249056
349 Ga0157374_10394079
350 Ga0163162_10025265
351 Ga0163162_10353144
352 Ga0157372_10409932
353 Ga0157375_11222149
354 Ga0163163_10056968
355 Ga0157380_10148512
356 Ga0157380_10277473
357 Ga0157376_10242953
358 Ga0157376_10497536
359 Ga0206353_10102630
360 Ga0213876_10000469
361 Ga0213876_10000586
362 Ga0209025_1000077
363 Ga0209758_1001357
364 Ga0207680_10081144
365 Ga0207699_10386794
366 Ga0207643_10024091
367 Ga0207705_10006356
368 Ga0207684_10007180
369 Ga0207684_10008548
370 Ga0207684_10013418
371 Ga0207684_10034079
372 Ga0207684_10034281
373 Ga0207695_10033050
374 Ga0207646_10113114
375 Ga0207646_10152552
376 Ga0207650_10399685
377 Ga0207659_10079956
378 Ga0207659_10462433
379 Ga0207700_10109795
380 Ga0207709_10531255
381 Ga0207704_10359756
382 Ga0207691_10012120
383 Ga0207691_10072755
384 Ga0207711_10000002
385 Ga0207711_10112070
386 Ga0207689_10042197
387 Ga0207689_10073273
388 Ga0207689_10537012
389 Ga0207679_10195411
390 Ga0207667_10024236
391 Ga0207651_10244614
392 Ga0207651_10346958
393 Ga0207658_10034002
394 Ga0207703_10480143
395 Ga0207648_10139093
396 Ga0207676_10783973
397 Ga0207674_10013466
398 Ga0207683_10006800
399 Ga0209983_1000537
400 Ga0209998_10012943
401 Ga0209974_10002957
402 Ga0265337_1003661
403 Ga0265334_10003731
404 Ga0265322_10001609
405 Ga0265338_10000006
406 Ga0265338_10008553
407 Ga0265338_10158821
408 Ga0265332_10036823
409 Ga0265325_10000007
410 Ga0265325_10000325
411 Ga0265329_10020644
412 Ga0265340_10044697
413 Ga0265340_10067566
414 Ga0265339_10001769
415 Ga0265331_10000006
416 Ga0265316_10018163
417 Ga0265316_10021286
418 Ga0265316_10466764
419 Ga0265313_10002331
420 Ga0265313_10033777
421 Ga0316575_10050070
422 Ga0316575_10087102
423 Ga0265314_10015969
424 Ga0265314_10058406
425 Ga0265314_10148152
426 Ga0265342_10000134
427 Ga0265342_10024454
428 Ga0307406_10139335
429 Ga0307409_100025241
430 Ga0316583_10017991
431 Ga0373928_0040911
432 Ga0373939_0010916
433 Ga0373943_0008087
434 Ga0373943_0072828
435 Ga0373943_0206743
436 Ga0373924_0077845
437 Ga0373935_0024793
438 Ga0373927_0110096
439 Ga0373927_0220139
440 Ga0373933_0028923
441 Ga0373947_0109165
442 Ga0373925_0027776
443 Ga0400483_262812
444 Ga0436365_0073850
445 Ga0436365_0508484
446 Ga0436365_1535986
447 Ga0436363_0076334
448 Ga0436363_1276710
449 Ga0436362_0024229
450 Ga0436362_0510521
451 Ga0439445_0026139
452 Ga0451577_0000074
453 Ga0451577_0001331
454 Ga0451577_0002926
455 Ga0451577_0009442
456 Ga0451577_0342043
457 Ga0453683_0213309
458 Ga0453684_0000446
459 Ga0453684_0001299
460 Ga0453684_0005537
461 Ga0453684_0011728
462 Ga0453684_0052159
463 Ga0451576_0000537
464 Ga0451576_0000797
465 Ga0451576_0051154
466 Ga0451576_0307207
467 Ga0495629_0035862
468 Ga0495651_0066637
469 Ga0495582_0017088
470 Ga0495662_0084275
471 Ga0495610_0059800
472 Ga0495628_0286148
473 Ga0495630_0038495
474 Ga0495652_0243755
475 Ga0495586_0005415
476 Ga0495647_0005396
477 Ga0495658_0075755
478 Ga0495613_0242473
479 Ga0495649_0173356
480 Ga0495589_0037736
481 Ga0495602_0122137
482 Ga0496106_0061364
483 Ga0496107_0071511
484 Ga0501032_0000346
485 Ga0501034_0000001
486 Ga0501034_0024748
487 Ga0501034_0217453
488 Ga0501036_0001170
489 Ga0501043_0060885
490 Ga0501046_0479059
491 Ga0501047_0006146
492 Ga0501047_0250437
493 Ga0501047_0447095
494 Ga0501067_0007275
495 Ga0501072_0168356
496 Ga0501074_0072198
497 Ga0501074_0095157
498 Ga0501075_0458579
499 Ga0501079_0124211
500 Ga0501080_0354889
501 Ga0501081_0024955
502 Ga0501044_0162488
503 Ga0501044_0216361
504 nmdc:mga05p37_68616_c1
505 nmdc:mga05p37_96161_c1
506 nmdc:mga0n895_79956_c1
507 nmdc:mga0rr50_76054_c1
508 nmdc:mga0a205_30159_c1
509 Ga0501082_0045522
510 Ga0530510_0276284
511 2523102308
512 8054007916

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

43

191

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9588 10 258
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9569 8 230
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9517 8 248
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.951 8 248
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9477 8 259
ID Description Score Start End Superfamily
af_P9WQL5_26_341_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9741 10 256 3.40.50.300
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9724 8 253 3.40.50.300
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9609 8 253 3.40.50.300
af_O69724_1_242_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9596 10 246 3.40.50.300
af_P16678_3_252_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9571 8 248 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A382EG01-F1-model_v4 ABC transporter domain-containing protein 0.9964 32 258 GO:0005524
GO:0016887
AF-A0A3D3IV71-F1-model_v4 ABC transporter ATP-binding protein 0.9907 120 261 GO:0005524
GO:0016887
AF-A0A382EG01-F1-model_v4 ABC transporter domain-containing protein 0.9878 32 258 GO:0005524
GO:0016887
AF-A0A4V1ZPM8-F1-model_v4 ATP-binding cassette domain-containing protein 0.9852 10 251 GO:0005524
GO:0016887
AF-A0A3A4NAN0-F1-model_v4 ATP-binding cassette domain-containing protein 0.9823 56 253 GO:0005524
GO:0016887

Map