F366895

General Info

Members Datasets Scaffolds Average Seq Length
256 208 229 373

Family's Representative Sequence

Representative Sequence 3300053093|Ga0500651_0000012|Ga0500651_0000012_204548_205858
Length 436
Sequence MGGICDKDATNFYQAEHRAEPVGEQPDLPLRTCHRIEEKAVMPQRRYPREKMIEQDYSNIRTEIVALLHAARIASARSVNALMTASYWEIGRRIVQFEQQGEERAEYGEALVGQLAVDLTRQFGRGFSQPNLWKMRAFYLAWPDKQILSTVSRESSKSSSSKDLALLSSDVEASAAAFPLPWSSYVRLLSVKRTEARAFYEAEALRSGWSMRQLNRQIESQLYERIALSRNKAAMLEKAGKAEPGDTVTPEEAIKDPFVLEFLNLKDEYSESELEDALIQHLADFLLELGDDFAFLGRQRRLRLDDTWFRIDLVFFHRRLRCLVIIDLKVGTFGYADAGQMHLYLNYAREHWMKEGENPPVGLILCAGKGAAEARYALDNLPNKVLAAEYQTVLPNEKLIIEELERSTQQLEERRLKSNTGSEPRPAVEKSRAEPS

Samples

Sample ID Description Type Environment
1 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
2 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
3 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
4 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
5 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
6 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
7 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
8 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
9 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
10 2818991446 Variovorax sp. 1180 Isolate Unclassified
11 2818991452 Burkholderia cepacia 561 Isolate Unclassified
12 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
13 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
14 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
15 2899924645 Variovorax sp. 369 Isolate Unclassified
16 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
17 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
18 2928037797 Variovorax sp. 1126 Isolate Unclassified
19 2928044640 Variovorax sp. 1128 Isolate Unclassified
20 2928051484 Variovorax sp. 1133 Isolate Unclassified
21 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
22 2928070936 Variovorax gossypii 1167 Isolate Unclassified
23 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
24 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
25 2928170801 Burkholderia sp. 572 Isolate Unclassified
26 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
27 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
28 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
29 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
30 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
31 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
32 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
33 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
34 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
35 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
36 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
37 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
38 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
39 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
40 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
41 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
42 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
43 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
44 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
45 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
46 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
52 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
68 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
75 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
76 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
78 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
79 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
101 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
102 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
103 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
104 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
121 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
122 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
123 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
124 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
125 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
126 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
131 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
132 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
133 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
144 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
145 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
146 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
147 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
148 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
154 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
155 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
156 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
157 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
158 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
159 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
162 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
163 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
164 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
165 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
166 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
167 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
168 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
169 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
172 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
173 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
174 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
177 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
178 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
179 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
180 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
181 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
182 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
183 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
184 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
185 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
186 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
187 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
188 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
196 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
197 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
198 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
199 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
200 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
201 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
202 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
203 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
204 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
205 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
206 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
207 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
208 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.45
Metatranscriptomes 0
Isolates 10.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.94
Nodule 0.78
Rhizoplane 8.59
Rhizosphere 67.19
Stem 0
Stem Tuber 0
Unclassified 12.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1001024 3300002705 Bacteria 13049
2 JGI25162J39368_1000540 3300002737 Bacteria 28138
3 JGI25157J39369_1000969 3300002741 Bacteria 13423
4 JGI25164J39214_1000283 3300002772 Bacteria 35999
5 JGI25165J46597_1000523 3300003214 Bacteria 36015
6 rootH1_10037289 3300003316 Bacteria 5582
7 rootH2_10042696 3300003320 Bacteria 6029
8 rootL2_10064185 3300003322 Bacteria 1800
9 Ga0055527_1002213 3300003760 Bacteria 3422
10 Ga0055535_1000136 3300003761 Bacteria 77549
11 Ga0055535_1000817 3300003761 Bacteria 22411
12 Ga0055535_1001352 3300003761 Bacteria 12897
13 Ga0055542_1000095 3300003762 Bacteria 119022
14 Ga0055542_1000464 3300003762 Bacteria 38149
15 Ga0055529_1000237 3300003763 Bacteria 68923
16 Ga0055540_1008209 3300003792 Bacteria 3796
17 Ga0065712_10009291 3300005290 Bacteria 3313
18 Ga0070658_10174711 3300005327 Bacteria 1806
19 Ga0070658_10204330 3300005327 Bacteria 1668
20 Ga0070666_10017076 3300005335 Bacteria 4649
21 Ga0070671_100224683 3300005355 Bacteria 1593
22 Ga0070678_100137574 3300005456 Bacteria 1950
23 Ga0070707_100004503 3300005468 Bacteria 13055
24 Ga0070699_100060281 3300005518 Bacteria 3288
25 Ga0070697_100088237 3300005536 Bacteria 2561
26 Ga0070665_100027063 3300005548 Bacteria 5775
27 Ga0068851_10017251 3300005834 Bacteria 3465
28 Ga0068858_100397204 3300005842 Bacteria 1324
29 Ga0068860_100017600 3300005843 Bacteria 6964
30 Ga0105244_10000400 3300009036 Bacteria 40279
31 Ga0105244_10076625 3300009036 Bacteria 1660
32 Ga0105250_10023856 3300009092 Bacteria 2466
33 Ga0105240_10431454 3300009093 Unclassified 1478
34 Ga0105245_10097042 3300009098 Bacteria 2721
35 Ga0114129_10233371 3300009147 Bacteria 2477
36 Ga0105248_10025001 3300009177 Bacteria 6638
37 Ga0105237_10004148 3300009545 Bacteria 16886
38 Ga0105237_10011709 3300009545 Bacteria 9276
39 Ga0105237_10317921 3300009545 Bacteria 1560
40 Ga0105238_10082975 3300009551 Bacteria 3194
41 Ga0105239_10220441 3300010375 Bacteria 2127
42 Ga0157371_10018753 3300013102 Bacteria 5112
43 Ga0157370_10079526 3300013104 Bacteria 3087
44 Ga0157374_10039638 3300013296 Bacteria 4335
45 Ga0163162_10001682 3300013306 Bacteria 20745
46 Ga0157372_10024804 3300013307 Bacteria 6517
47 Ga0157372_10356498 3300013307 Bacteria 1704
48 Ga0157375_10013428 3300013308 Bacteria 7288
49 Ga0182008_10032933 3300014497 Bacteria 2602
50 Ga0182006_1025230 3300015261 Bacteria 2443
51 Ga0182007_10000601 3300015262 Bacteria 21082
52 Ga0213872_10009074 3300021361 Bacteria 4783
53 Ga0213872_10045198 3300021361 Bacteria 2004
54 Ga0209566_100317 3300025225 Bacteria 43641
55 Ga0209674_102200 3300025226 Bacteria 4335
56 Ga0209672_100117 3300025228 Bacteria 86660
57 Ga0209672_101086 3300025228 Bacteria 11563
58 Ga0209147_100778 3300025229 Bacteria 15536
59 Ga0207427_100286 3300025231 Bacteria 36069
60 Ga0209437_100434 3300025233 Bacteria 36041
61 Ga0209258_100069 3300025242 Bacteria 280496
62 Ga0209258_100338 3300025242 Bacteria 69473
63 Ga0209646_1001002 3300025246 Bacteria 8669
64 Ga0209026_1000768 3300025250 Bacteria 17976
65 Ga0209148_1000076 3300025254 Bacteria 301449
66 Ga0209148_1000309 3300025254 Bacteria 69520
67 Ga0209759_1000687 3300025256 Bacteria 30489
68 Ga0209233_1000335 3300025261 Bacteria 47566
69 Ga0209455_1000018 3300025272 Bacteria 718034
70 Ga0207426_1002554 3300025302 Bacteria 11397
71 Ga0209051_1000300 3300025303 Bacteria 78175
72 Ga0207656_10002585 3300025321 Bacteria 6122
73 Ga0207655_1000072 3300025728 Bacteria 236536
74 Ga0207713_1015056 3300025735 Bacteria 3985
75 Ga0207680_10009833 3300025903 Bacteria 4762
76 Ga0207705_10016385 3300025909 Bacteria 5314
77 Ga0207671_10005295 3300025914 Bacteria 11958
78 Ga0207671_10008802 3300025914 Bacteria 8501
79 Ga0207646_10005026 3300025922 Bacteria 14080
80 Ga0207711_10197144 3300025941 Bacteria 1837
81 Ga0207683_10104792 3300026121 Bacteria 2528
82 Ga0207698_10258593 3300026142 Bacteria 1598
83 Ga0268266_10001319 3300028379 Bacteria 30128
84 Ga0268264_10008376 3300028381 Bacteria 8595
85 Ga0265322_10000667 3300028654 Bacteria 12802
86 Ga0265339_10000808 3300031249 Bacteria 24149
87 Ga0265316_10029449 3300031344 Bacteria 4514
88 Ga0265314_10000991 3300031711 Bacteria 33386
89 Ga0316576_10000997 3300031727 Bacteria 14581
90 Ga0373949_0000005 3300035090 Bacteria 81783
91 Ga0436361_0207682 3300039447 Bacteria 6259
92 Ga0436361_0802585 3300039447 Bacteria 3085
93 Ga0450911_000502 3300042115 Bacteria 12427
94 Ga0451577_0076649 3300042876 Bacteria 2981
95 Ga0451577_0152087 3300042876 Bacteria 2082
96 Ga0466972_0001370 3300044658 Bacteria 11815
97 Ga0453683_0158531 3300044673 Bacteria 1431
98 Ga0466961_0065087 3300044693 Bacteria 2316
99 Ga0466963_0077042 3300044694 Bacteria 2252
100 Ga0453684_0003140 3300044712 Bacteria 38042
101 Ga0453684_0020779 3300044712 Bacteria 9868
102 Ga0451576_0072166 3300045051 Bacteria 3593
103 Ga0466958_0000111 3300045836 Bacteria 26028
104 Ga0495592_0010945 3300046454 Bacteria 6846
105 Ga0495603_0012280 3300046455 Bacteria 5184
106 Ga0495603_0026153 3300046455 Bacteria 3526
107 Ga0495590_0001424 3300046457 Bacteria 10331
108 Ga0495629_0000130 3300046459 Bacteria 65355
109 Ga0495629_0000819 3300046459 Bacteria 25210
110 Ga0495638_0002100 3300046460 Bacteria 16872
111 Ga0495653_0000885 3300046463 Bacteria 23146
112 Ga0495653_0014162 3300046463 Bacteria 6500
113 Ga0495650_0001864 3300046471 Bacteria 18854
114 Ga0495580_0002936 3300046472 Bacteria 14637
115 Ga0495580_0011892 3300046472 Bacteria 6711
116 Ga0495580_0037089 3300046472 Bacteria 3499
117 Ga0495582_0022362 3300046473 Bacteria 3460
118 Ga0495605_0001936 3300046474 Bacteria 13168
119 Ga0495664_0025696 3300046477 Bacteria 3428
120 Ga0495607_0036556 3300046501 Bacteria 2957
121 Ga0495607_0049722 3300046501 Bacteria 2443
122 Ga0495583_0060271 3300046506 Bacteria 1697
123 Ga0495606_0061065 3300046507 Bacteria 2412
124 Ga0495608_0045588 3300046511 Bacteria 2921
125 Ga0495628_0006600 3300046516 Bacteria 10128
126 Ga0495628_0023213 3300046516 Bacteria 5093
127 Ga0495628_0045301 3300046516 Bacteria 3499
128 Ga0495630_0035744 3300046517 Bacteria 3712
129 Ga0495648_0022091 3300046524 Bacteria 4390
130 Ga0495648_0073559 3300046524 Bacteria 1972
131 Ga0495666_0000064 3300046526 Bacteria 40955
132 Ga0495642_0001473 3300046528 Bacteria 10524
133 Ga0495654_0067224 3300046530 Bacteria 1707
134 Ga0495665_0007239 3300046531 Bacteria 5989
135 Ga0495665_0014617 3300046531 Bacteria 4232
136 Ga0495640_0001956 3300046533 Bacteria 16435
137 Ga0495586_0018078 3300046535 Bacteria 3749
138 Ga0495587_0003801 3300046536 Bacteria 10016
139 Ga0495645_0001301 3300046543 Bacteria 16970
140 Ga0495645_0002592 3300046543 Bacteria 12288
141 Ga0495622_0000644 3300046557 Bacteria 20077
142 Ga0495633_0022261 3300046558 Bacteria 3157
143 Ga0495634_0011986 3300046642 Bacteria 6286
144 Ga0495635_0009914 3300046663 Bacteria 6659
145 Ga0495661_0027534 3300046665 Bacteria 3647
146 Ga0495599_0000578 3300046678 Bacteria 20921
147 Ga0495646_0018536 3300046680 Bacteria 4407
148 Ga0495646_0022183 3300046680 Bacteria 4006
149 Ga0495646_0042086 3300046680 Bacteria 2804
150 Ga0495646_0104464 3300046680 Bacteria 1620
151 Ga0495669_0008460 3300046684 Bacteria 4328
152 Ga0495669_0030943 3300046684 Bacteria 2349
153 Ga0495613_0083664 3300046689 Bacteria 2317
154 Ga0495624_0005955 3300046690 Bacteria 8714
155 Ga0495624_0012603 3300046690 Bacteria 5772
156 Ga0495649_0033104 3300046694 Bacteria 2845
157 Ga0495589_0014298 3300046794 Bacteria 4089
158 Ga0495589_0065435 3300046794 Bacteria 1782
159 Ga0495581_0026567 3300047315 Bacteria 3355
160 Ga0495581_0043164 3300047315 Bacteria 2608
161 Ga0495604_0143422 3300047317 Bacteria 1704
162 Ga0495636_0004577 3300047318 Bacteria 5418
163 Ga0495674_0029768 3300047319 Bacteria 4968
164 Ga0495672_0022634 3300047320 Bacteria 4081
165 Ga0495672_0029004 3300047320 Bacteria 3491
166 Ga0495672_0136431 3300047320 Bacteria 1286
167 Ga0495676_0022982 3300047321 Bacteria 5418
168 Ga0495680_0032465 3300047322 Bacteria 4237
169 Ga0495683_0030417 3300047323 Bacteria 2754
170 Ga0495687_012625 3300047443 Bacteria 4453
171 Ga0495675_0014761 3300047444 Bacteria 4938
172 Ga0495675_0118530 3300047444 Bacteria 1649
173 Ga0495679_001009 3300047446 Bacteria 17320
174 Ga0495685_018093 3300047447 Bacteria 2416
175 Ga0495681_0049900 3300047470 Bacteria 1976
176 Ga0495686_0010386 3300047472 Bacteria 6626
177 Ga0495593_0003789 3300047673 Bacteria 9034
178 Ga0495593_0007762 3300047673 Bacteria 6253
179 Ga0495593_0012572 3300047673 Bacteria 4834
180 Ga0495602_0044015 3300048088 Bacteria 4052
181 Ga0496100_0018791 3300048903 Bacteria 4109
182 Ga0496101_0127557 3300048904 Bacteria 1929
183 Ga0496101_0197960 3300048904 Bacteria 1552
184 Ga0496103_0009574 3300048906 Bacteria 5735
185 Ga0496104_0019907 3300048907 Bacteria 6146
186 Ga0496105_0036782 3300048908 Bacteria 4034
187 Ga0496106_0017272 3300048909 Bacteria 5340
188 Ga0496106_0240899 3300048909 Bacteria 1445
189 Ga0496107_0002673 3300048910 Bacteria 11676
190 Ga0496107_0016541 3300048910 Bacteria 5182
191 Ga0496108_0423625 3300048911 Bacteria 1163
192 Ga0496112_0028607 3300048915 Bacteria 5381
193 Ga0496112_0155201 3300048915 Bacteria 2256
194 Ga0496113_0007984 3300048916 Bacteria 6858
195 Ga0496114_0001072 3300048917 Bacteria 20590
196 Ga0496114_0248732 3300048917 Bacteria 1564
197 Ga0496115_0017977 3300048918 Bacteria 5417
198 Ga0496115_0057307 3300048918 Bacteria 3134
199 Ga0496116_0082103 3300048919 Bacteria 1995
200 Ga0496118_0008349 3300048921 Bacteria 10718
201 Ga0496120_0002466 3300048923 Bacteria 18637
202 Ga0496121_0002057 3300048924 Bacteria 31838
203 Ga0496121_0174290 3300048924 Bacteria 1559
204 Ga0496122_0012981 3300048925 Bacteria 8216
205 Ga0496122_0019514 3300048925 Bacteria 6188
206 Ga0496123_0021584 3300048926 Bacteria 4999
207 Ga0496124_0011114 3300048927 Bacteria 9032
208 Ga0496125_0007718 3300048928 Bacteria 11396
209 Ga0495678_035415 3300049459 Bacteria 2047
210 Ga0501034_0000037 3300049571 Bacteria 239254
211 Ga0501034_0018245 3300049571 Bacteria 7199
212 Ga0501036_0104711 3300049572 Bacteria 2392
213 Ga0501039_0031423 3300049575 Bacteria 4093
214 Ga0501043_0024454 3300049579 Bacteria 4740
215 Ga0501046_0005442 3300049580 Bacteria 11379
216 Ga0501047_0000196 3300049581 Bacteria 73284
217 Ga0501048_0004757 3300049582 Bacteria 10344
218 Ga0501070_0009967 3300049586 Bacteria 8034
219 Ga0501072_0000056 3300049588 Bacteria 80824
220 Ga0501073_0001062 3300049589 Bacteria 19839
221 Ga0501074_0000147 3300049590 Bacteria 36363
222 Ga0501079_0000667 3300049741 Bacteria 22986
223 Ga0501080_0005267 3300049742 Bacteria 11517
224 Ga0501083_0004852 3300049744 Bacteria 9505
225 Ga0501035_0021332 3300049822 Bacteria 5955
226 nmdc:mga06r32_180830_c1 3300050510 Bacteria 2094
227 Ga0500651_0000012 3300053093 Bacteria 243306
228 Ga0501084_0000544 3300054114 Bacteria 28733
229 Ga0501082_0020551 3300060353 Bacteria 5690

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0104711 Ga0501036_0104711_1125_2063 281
2 3300026142 Ga0207698_10258593 Ga0207698_102585932 299
3 3300049575 Ga0501039_0031423 Ga0501039_0031423_2477_3505 299
4 3300048911 Ga0496108_0423625 Ga0496108_0423625_47_1093 302
5 3300047319 Ga0495674_0029768 Ga0495674_0029768_15_1064 304
6 3300046558 Ga0495633_0022261 Ga0495633_0022261_1343_2356 305
7 3300005327 Ga0070658_10204330 Ga0070658_102043301 307
8 iso_pu_bacteria 2599185239 2599741666 307
9 iso_pu_bacteria 2818991452 2819637342 307
10 3300005548 Ga0070665_100027063 Ga0070665_1000270637 310
11 3300005842 Ga0068858_100397204 Ga0068858_1003972041 310
12 3300028379 Ga0268266_10001319 Ga0268266_1000131933 310
13 3300031711 Ga0265314_10000991 Ga0265314_1000099126 310
14 3300005536 Ga0070697_100088237 Ga0070697_1000882371 313
15 3300009147 Ga0114129_10233371 Ga0114129_102333712 313
16 3300009092 Ga0105250_10023856 Ga0105250_100238561 315
17 3300042876 Ga0451577_0152087 Ga0451577_0152087_539_1657 322
18 3300044673 Ga0453683_0158531 Ga0453683_0158531_168_1286 322
19 3300044712 Ga0453684_0020779 Ga0453684_0020779_1565_2683 322
20 3300045051 Ga0451576_0072166 Ga0451576_0072166_425_1543 322
21 3300031727 Ga0316576_10000997 Ga0316576_100009973 324
22 iso_pu_bacteria 2884086401 2884086996 325
23 3300005456 Ga0070678_100137574 Ga0070678_1001375742 327
24 3300009036 Ga0105244_10000400 Ga0105244_1000040034 327
25 3300010375 Ga0105239_10220441 Ga0105239_102204412 327
26 3300014497 Ga0182008_10032933 Ga0182008_100329332 327
27 3300015261 Ga0182006_1025230 Ga0182006_10252302 327
28 3300015262 Ga0182007_10000601 Ga0182007_100006016 327
29 3300025728 Ga0207655_1000072 Ga0207655_100007255 327
30 3300026121 Ga0207683_10104792 Ga0207683_101047922 327
31 3300048915 Ga0496112_0155201 Ga0496112_0155201_279_1433 327
32 3300048925 Ga0496122_0012981 Ga0496122_0012981_5257_6411 327
33 3300048926 Ga0496123_0021584 Ga0496123_0021584_1052_2206 327
34 3300046459 Ga0495629_0000130 Ga0495629_0000130_6724_7881 328
35 3300046463 Ga0495653_0000885 Ga0495653_0000885_6720_7877 328
36 3300046472 Ga0495580_0011892 Ga0495580_0011892_447_1604 328
37 3300046516 Ga0495628_0006600 Ga0495628_0006600_8914_10071 328
38 3300046524 Ga0495648_0073559 Ga0495648_0073559_20_1177 328
39 3300046680 Ga0495646_0042086 Ga0495646_0042086_1484_2641 328
40 3300046690 Ga0495624_0005955 Ga0495624_0005955_824_1981 328
41 3300047320 Ga0495672_0029004 Ga0495672_0029004_2238_3395 328
42 3300047323 Ga0495683_0030417 Ga0495683_0030417_830_1987 328
43 3300047673 Ga0495593_0012572 Ga0495593_0012572_2198_3355 328
44 iso_pu_bacteria 2510065045 2510249690 328
45 iso_pu_bacteria 2718217991 2719637448 328
46 3300025225 Ga0209566_100317 Ga0209566_10031727 329
47 3300025226 Ga0209674_102200 Ga0209674_1022001 329
48 3300003320 rootH2_10042696 rootH2_100426962 330
49 3300003322 rootL2_10064185 rootL2_100641852 330
50 3300009545 Ga0105237_10004148 Ga0105237_100041483 330
51 3300025914 Ga0207671_10008802 Ga0207671_100088027 330
52 3300044712 Ga0453684_0003140 Ga0453684_0003140_26578_27786 331
53 3300047673 Ga0495593_0007762 Ga0495593_0007762_949_2103 331
54 iso_pu_bacteria 2857357740 2857359727 331
55 3300005290 Ga0065712_10009291 Ga0065712_100092913 332
56 3300005355 Ga0070671_100224683 Ga0070671_1002246831 332
57 3300009036 Ga0105244_10076625 Ga0105244_100766251 332
58 3300013296 Ga0157374_10039638 Ga0157374_100396384 332
59 3300025735 Ga0207713_1015056 Ga0207713_10150564 332
60 3300031344 Ga0265316_10029449 Ga0265316_100294492 332
61 3300046457 Ga0495590_0001424 Ga0495590_0001424_8388_9542 332
62 3300046507 Ga0495606_0061065 Ga0495606_0061065_192_1346 332
63 3300046694 Ga0495649_0033104 Ga0495649_0033104_1110_2264 332
64 3300047320 Ga0495672_0136431 Ga0495672_0136431_26_1180 332
65 3300047443 Ga0495687_012625 Ga0495687_012625_2250_3404 332
66 3300048906 Ga0496103_0009574 Ga0496103_0009574_1693_2847 332
67 3300048910 Ga0496107_0002673 Ga0496107_0002673_1692_2846 332
68 3300048918 Ga0496115_0057307 Ga0496115_0057307_686_1840 332
69 3300048919 Ga0496116_0082103 Ga0496116_0082103_737_1891 332
70 3300048921 Ga0496118_0008349 Ga0496118_0008349_4209_5363 332
71 3300049459 Ga0495678_035415 Ga0495678_035415_785_1939 332
72 3300003761 Ga0055535_1000136 Ga0055535_10001362 333
73 3300003762 Ga0055542_1000095 Ga0055542_100009543 333
74 3300025228 Ga0209672_101086 Ga0209672_1010867 333
75 3300025229 Ga0209147_100778 Ga0209147_1007786 333
76 3300025242 Ga0209258_100069 Ga0209258_10006953 333
77 3300025254 Ga0209148_1000076 Ga0209148_1000076203 333
78 3300025302 Ga0207426_1002554 Ga0207426_100255415 333
79 3300048907 Ga0496104_0019907 Ga0496104_0019907_2616_3770 333
80 3300048909 Ga0496106_0017272 Ga0496106_0017272_109_1263 333
81 3300048915 Ga0496112_0028607 Ga0496112_0028607_3653_4807 333
82 3300048916 Ga0496113_0007984 Ga0496113_0007984_2452_3606 333
83 3300048924 Ga0496121_0002057 Ga0496121_0002057_29858_31012 333
84 3300048925 Ga0496122_0019514 Ga0496122_0019514_827_1981 333
85 3300048927 Ga0496124_0011114 Ga0496124_0011114_20_1174 333
86 3300048928 Ga0496125_0007718 Ga0496125_0007718_6814_7968 333
87 iso_pu_bacteria 2870068957 2870075996 333
88 iso_pu_bacteria 2900634093 2900642030 333
89 iso_pu_bacteria 2928170801 2928178432 333
90 iso_pu_bacteria 8020953355 8020953601 333
91 iso_pu_bacteria 8021120328 8021127169 333
92 3300009098 Ga0105245_10097042 Ga0105245_100970422 334
93 3300013104 Ga0157370_10079526 Ga0157370_100795261 334
94 3300025909 Ga0207705_10016385 Ga0207705_100163855 334
95 3300035090 Ga0373949_0000005 Ga0373949_0000005_31930_33219 334
96 3300046531 Ga0495665_0014617 Ga0495665_0014617_2608_3765 334
97 3300046690 Ga0495624_0012603 Ga0495624_0012603_2586_3743 334
98 3300047321 Ga0495676_0022982 Ga0495676_0022982_2010_3167 334
99 iso_pu_bacteria 2818991446 2819598257 334
100 iso_pu_bacteria 2899924645 2899926369 334
101 iso_pu_bacteria 2928037797 2928044395 334
102 iso_pu_bacteria 2928044640 2928051236 334
103 iso_pu_bacteria 2928051484 2928058458 334
104 iso_pu_bacteria 2928064002 2928069128 334
105 3300005335 Ga0070666_10017076 Ga0070666_100170766 335
106 3300009093 Ga0105240_10431454 Ga0105240_104314542 335
107 3300009177 Ga0105248_10025001 Ga0105248_100250013 335
108 3300009545 Ga0105237_10317921 Ga0105237_103179211 335
109 3300009551 Ga0105238_10082975 Ga0105238_100829753 335
110 3300013306 Ga0163162_10001682 Ga0163162_100016825 335
111 3300013308 Ga0157375_10013428 Ga0157375_100134285 335
112 3300025903 Ga0207680_10009833 Ga0207680_100098336 335
113 3300025941 Ga0207711_10197144 Ga0207711_101971442 335
114 3300044693 Ga0466961_0065087 Ga0466961_0065087_533_1717 335
115 3300044694 Ga0466963_0077042 Ga0466963_0077042_593_1777 335
116 3300045836 Ga0466958_0000111 Ga0466958_0000111_773_1957 335
117 3300046455 Ga0495603_0012280 Ga0495603_0012280_165_1331 335
118 3300046459 Ga0495629_0000819 Ga0495629_0000819_11769_12935 335
119 3300046460 Ga0495638_0002100 Ga0495638_0002100_2381_3538 335
120 3300046471 Ga0495650_0001864 Ga0495650_0001864_4629_5795 335
121 3300046472 Ga0495580_0002936 Ga0495580_0002936_968_2134 335
122 3300046474 Ga0495605_0001936 Ga0495605_0001936_9187_10344 335
123 3300046501 Ga0495607_0036556 Ga0495607_0036556_1536_2693 335
124 3300046501 Ga0495607_0049722 Ga0495607_0049722_394_1560 335
125 3300046506 Ga0495583_0060271 Ga0495583_0060271_459_1625 335
126 3300046511 Ga0495608_0045588 Ga0495608_0045588_463_1629 335
127 3300046528 Ga0495642_0001473 Ga0495642_0001473_3836_5002 335
128 3300046530 Ga0495654_0067224 Ga0495654_0067224_240_1424 335
129 3300046531 Ga0495665_0007239 Ga0495665_0007239_165_1331 335
130 3300046543 Ga0495645_0001301 Ga0495645_0001301_11738_12904 335
131 3300046680 Ga0495646_0022183 Ga0495646_0022183_2793_3959 335
132 3300046684 Ga0495669_0008460 Ga0495669_0008460_1468_2625 335
133 3300046684 Ga0495669_0030943 Ga0495669_0030943_865_2031 335
134 3300046689 Ga0495613_0083664 Ga0495613_0083664_165_1331 335
135 3300046794 Ga0495589_0014298 Ga0495589_0014298_227_1384 335
136 3300046794 Ga0495589_0065435 Ga0495589_0065435_70_1236 335
137 3300047315 Ga0495581_0043164 Ga0495581_0043164_1044_2210 335
138 3300047444 Ga0495675_0118530 Ga0495675_0118530_434_1600 335
139 3300047447 Ga0495685_018093 Ga0495685_018093_298_1455 335
140 3300047470 Ga0495681_0049900 Ga0495681_0049900_289_1455 335
141 3300048903 Ga0496100_0018791 Ga0496100_0018791_360_1526 335
142 3300048904 Ga0496101_0127557 Ga0496101_0127557_335_1501 335
143 3300048904 Ga0496101_0197960 Ga0496101_0197960_117_1274 335
144 3300048908 Ga0496105_0036782 Ga0496105_0036782_69_1235 335
145 3300048909 Ga0496106_0240899 Ga0496106_0240899_42_1199 335
146 3300048910 Ga0496107_0016541 Ga0496107_0016541_2045_3202 335
147 3300048917 Ga0496114_0001072 Ga0496114_0001072_11168_12334 335
148 3300048918 Ga0496115_0017977 Ga0496115_0017977_2226_3392 335
149 3300049571 Ga0501034_0000037 Ga0501034_0000037_216967_218112 335
150 3300049571 Ga0501034_0018245 Ga0501034_0018245_761_1981 335
151 3300049579 Ga0501043_0024454 Ga0501043_0024454_966_2111 335
152 3300049580 Ga0501046_0005442 Ga0501046_0005442_6477_7622 335
153 3300049581 Ga0501047_0000196 Ga0501047_0000196_6477_7622 335
154 3300049582 Ga0501048_0004757 Ga0501048_0004757_4364_5509 335
155 3300049586 Ga0501070_0009967 Ga0501070_0009967_5834_6979 335
156 3300049588 Ga0501072_0000056 Ga0501072_0000056_68019_69164 335
157 3300049589 Ga0501073_0001062 Ga0501073_0001062_839_1984 335
158 3300049590 Ga0501074_0000147 Ga0501074_0000147_26599_27744 335
159 3300049741 Ga0501079_0000667 Ga0501079_0000667_20914_22059 335
160 3300049742 Ga0501080_0005267 Ga0501080_0005267_9131_10276 335
161 3300049744 Ga0501083_0004852 Ga0501083_0004852_2757_3902 335
162 3300054114 Ga0501084_0000544 Ga0501084_0000544_6448_7593 335
163 3300060353 Ga0501082_0020551 Ga0501082_0020551_3030_4175 335
164 iso_pu_bacteria 2599185214 2599627669 335
165 iso_pu_bacteria 2599185226 2599677238 335
166 iso_pu_bacteria 2599185227 2599684683 335
167 iso_pu_bacteria 2599185229 2599696650 335
168 iso_pu_bacteria 2928070936 2928078221 335
169 3300005327 Ga0070658_10174711 Ga0070658_101747112 336
170 3300013307 Ga0157372_10024804 Ga0157372_100248042 336
171 3300047318 Ga0495636_0004577 Ga0495636_0004577_384_1541 336
172 3300021361 Ga0213872_10045198 Ga0213872_100451981 337
173 3300039447 Ga0436361_0207682 Ga0436361_0207682_1497_2687 337
174 3300046454 Ga0495592_0010945 Ga0495592_0010945_2595_3752 337
175 3300046455 Ga0495603_0026153 Ga0495603_0026153_1197_2354 337
176 3300046463 Ga0495653_0014162 Ga0495653_0014162_1896_3053 337
177 3300046472 Ga0495580_0037089 Ga0495580_0037089_732_1889 337
178 3300046473 Ga0495582_0022362 Ga0495582_0022362_393_1550 337
179 3300046477 Ga0495664_0025696 Ga0495664_0025696_344_1501 337
180 3300046516 Ga0495628_0045301 Ga0495628_0045301_1611_2768 337
181 3300046517 Ga0495630_0035744 Ga0495630_0035744_944_2101 337
182 3300046524 Ga0495648_0022091 Ga0495648_0022091_1425_2582 337
183 3300046526 Ga0495666_0000064 Ga0495666_0000064_32772_33929 337
184 3300046533 Ga0495640_0001956 Ga0495640_0001956_14134_15291 337
185 3300046535 Ga0495586_0018078 Ga0495586_0018078_1639_2796 337
186 3300046536 Ga0495587_0003801 Ga0495587_0003801_1639_2796 337
187 3300046543 Ga0495645_0002592 Ga0495645_0002592_1639_2796 337
188 3300046557 Ga0495622_0000644 Ga0495622_0000644_1874_3031 337
189 3300046642 Ga0495634_0011986 Ga0495634_0011986_1639_2796 337
190 3300046663 Ga0495635_0009914 Ga0495635_0009914_675_1832 337
191 3300046665 Ga0495661_0027534 Ga0495661_0027534_1943_3100 337
192 3300046678 Ga0495599_0000578 Ga0495599_0000578_12544_13701 337
193 3300046680 Ga0495646_0018536 Ga0495646_0018536_944_2101 337
194 3300047315 Ga0495581_0026567 Ga0495581_0026567_874_2031 337
195 3300047322 Ga0495680_0032465 Ga0495680_0032465_1924_3081 337
196 3300047446 Ga0495679_001009 Ga0495679_001009_7228_8385 337
197 3300047673 Ga0495593_0003789 Ga0495593_0003789_1173_2330 337
198 3300048088 Ga0495602_0044015 Ga0495602_0044015_1924_3081 337
199 3300048924 Ga0496121_0174290 Ga0496121_0174290_104_1261 337
200 3300003316 rootH1_10037289 rootH1_100372894 338
201 3300005834 Ga0068851_10017251 Ga0068851_100172512 338
202 3300013102 Ga0157371_10018753 Ga0157371_100187535 338
203 3300013307 Ga0157372_10356498 Ga0157372_103564982 338
204 3300025321 Ga0207656_10002585 Ga0207656_100025852 338
205 3300042115 Ga0450911_000502 Ga0450911_000502_6587_7798 338
206 3300048923 Ga0496120_0002466 Ga0496120_0002466_16764_17924 338
207 iso_pu_bacteria 2919046199 2919047611 338
208 3300047320 Ga0495672_0022634 Ga0495672_0022634_359_1522 339
209 iso_pu_bacteria 2744054901 2746097957 339
210 iso_pu_bacteria 2928108538 2928114862 339
211 iso_pu_bacteria 2928135762 2928141504 339
212 3300009545 Ga0105237_10011709 Ga0105237_100117095 340
213 3300025914 Ga0207671_10005295 Ga0207671_100052955 340
214 3300031249 Ga0265339_10000808 Ga0265339_100008088 340
215 3300048917 Ga0496114_0248732 Ga0496114_0248732_112_1257 340
216 iso_pu_bacteria 2643221639 2644222452 340
217 3300003792 Ga0055540_1008209 Ga0055540_10082092 341
218 3300021361 Ga0213872_10009074 Ga0213872_100090742 341
219 3300025303 Ga0209051_1000300 Ga0209051_100030023 341
220 3300028654 Ga0265322_10000667 Ga0265322_100006674 341
221 3300039447 Ga0436361_0802585 Ga0436361_0802585_1142_2287 341
222 3300047444 Ga0495675_0014761 Ga0495675_0014761_645_1802 341
223 3300050510 nmdc:mga06r32_180830_c1 nmdc:mga06r32_180830_c1_40_1302 341
224 3300044658 Ga0466972_0001370 Ga0466972_0001370_9493_10662 342
225 3300042876 Ga0451577_0076649 Ga0451577_0076649_1099_2307 343
226 3300046516 Ga0495628_0023213 Ga0495628_0023213_3525_4703 343
227 3300046680 Ga0495646_0104464 Ga0495646_0104464_426_1604 343
228 3300047317 Ga0495604_0143422 Ga0495604_0143422_15_1196 343
229 3300005843 Ga0068860_100017600 Ga0068860_1000176006 344
230 3300028381 Ga0268264_10008376 Ga0268264_100083766 344
231 3300049822 Ga0501035_0021332 Ga0501035_0021332_4450_5640 345
232 3300005468 Ga0070707_100004503 Ga0070707_1000045035 348
233 3300005518 Ga0070699_100060281 Ga0070699_1000602811 348
234 3300025922 Ga0207646_10005026 Ga0207646_1000502617 348
235 3300053093 Ga0500651_0000012 Ga0500651_0000012_204548_205858 350
236 3300047472 Ga0495686_0010386 Ga0495686_0010386_4505_5686 351
237 3300002705 JGI25156J39149_1001024 JGI25156J39149_10010248 359
238 3300002737 JGI25162J39368_1000540 JGI25162J39368_100054016 359
239 3300002741 JGI25157J39369_1000969 JGI25157J39369_10009699 359
240 3300002772 JGI25164J39214_1000283 JGI25164J39214_10002833 359
241 3300003214 JGI25165J46597_1000523 JGI25165J46597_100052322 359
242 3300003760 Ga0055527_1002213 Ga0055527_10022132 359
243 3300003761 Ga0055535_1000817 Ga0055535_100081713 359
244 3300003761 Ga0055535_1001352 Ga0055535_10013522 359
245 3300003762 Ga0055542_1000464 Ga0055542_10004643 359
246 3300003763 Ga0055529_1000237 Ga0055529_100023755 359
247 3300025228 Ga0209672_100117 Ga0209672_10011770 359
248 3300025231 Ga0207427_100286 Ga0207427_10028622 359
249 3300025233 Ga0209437_100434 Ga0209437_1004343 359
250 3300025242 Ga0209258_100338 Ga0209258_1003383 359
251 3300025246 Ga0209646_1001002 Ga0209646_10010022 359
252 3300025250 Ga0209026_1000768 Ga0209026_100076812 359
253 3300025254 Ga0209148_1000309 Ga0209148_100030953 359
254 3300025256 Ga0209759_1000687 Ga0209759_100068719 359
255 3300025261 Ga0209233_1000335 Ga0209233_100033522 359
256 3300025272 Ga0209455_1000018 Ga0209455_1000018342 359

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06250

YhcG_C

YhcG PDDEXK nuclease domain

251

406

0.97

PF17761

DUF1016_N

DUF1016 N-terminal domain

63

225

0.97

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pLDDT pTM Quality
63.77 0.35 Low
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Predicted Structure (AlphaFold2)

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