F366935
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 256 | 170 | 512 | 598 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2883068021|2883072829 |
| Length | 698 |
| Sequence | ASIKQAAAEAVQALYQQPFTAADVSVNTTKPEFEGEYTIVVFPFTKFSRQKPEETAGAIGTWLAEHHPALVAGFNVVKGFLNLSVHDQFWTSFVQNAHHNTNVGQQPANGKKVMVEYSSPNTNKPLHLGHLRNNFLGFSVSEILKANGFEVVKANLVNDRGIHICKSMLAWQLFAHGDTPESTGKKGDHLVGDYYVHFESILRDQAEPIISRVLEGNFGDFEGEQVEKLIKLHAALNKPEFKANVEKAEKLRHDIKALARTASAETKEVVSRIEKGDFSDFEGEDKARAKSLHQELTPAIKSDEEKADKIHDDIKELSRNRTEIMQQAKIMLQQWEAGNPEVRALWQTMNSWVYEGFEKTYKRLGIDFDKMYFESNTYLLGKDVVEEGLRKGVFFKKADNSVWIDLTADGLDEKLVLRGDGTSVYITQDIGTARLKYDDYHMDQSIYVVADEQNYHFKVLKLIMQKLGEPSADGIAHLSYGMVELPHGRMKSREGTVVDADDLVEEMVSTAAKYTEELGKVKDFTEEELRELYETIGLGAMKFFLLKVDPKKKMVFNPEESIDIHGFTGPFIQYSHARIRSILREFSAEDLAALASYRHNDALLPMEKELIKINEQFGEVLAEAGREMSPSVIANYAFLLAQTFNSFYAKKESGKYTYSVRDAENEDKRKLRLQIASLTANTIRQAMKLLGIRVPERM |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 4 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 5 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 6 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 7 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 8 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 9 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 10 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 11 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 12 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 13 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 14 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 15 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 16 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 17 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 18 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 20 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 22 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 23 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 24 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 25 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 29 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 33 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 34 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 35 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 36 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 38 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 40 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 41 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 42 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 43 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 44 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 45 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 46 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 47 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 49 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 50 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 51 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 52 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 62 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 63 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 64 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 65 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 70 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 71 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 72 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 73 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 74 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 75 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 76 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 77 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 78 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 79 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 80 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 81 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 82 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 83 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 84 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 85 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 86 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 87 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 88 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 89 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 90 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 107 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 108 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 109 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 110 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 111 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 112 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 113 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 114 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 115 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 116 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 117 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 118 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 119 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 120 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 121 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 122 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 123 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 124 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 125 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 126 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 131 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 132 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049703 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control | Metagenome | Rhizosphere |
| 138 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 139 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300050005 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought | Metagenome | Rhizosphere |
| 141 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 144 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 145 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 146 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 147 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 148 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 149 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 150 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 151 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 152 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 153 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 154 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 155 | 2883068021 | Chitinophaga rhizosphaerae T16R-86 | Isolate | Rhizosphere |
| 156 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 157 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 158 | 2818991460 | Chitinophaga polysaccharea 1209 | Isolate | Unclassified |
| 159 | 2821136567 | Chitinophaga sancti 1232 | Isolate | Unclassified |
| 160 | 2840677318 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 161 | 2884791551 | Chitinophaga oryzae 1310 | Isolate | Unclassified |
| 162 | 2896085136 | Chitinophaga alhagiae T22 | Isolate | Unclassified |
| 163 | 2896109856 | Chitinophaga sp. SYP-B3965 | Isolate | Rhizosphere |
| 164 | 2904467357 | Chitinophaga sancti 3198 | Isolate | Unclassified |
| 165 | 2929177148 | Chitinophaga sp. R-72269 Hybrid assembly | Isolate | Unclassified |
| 166 | 2929239360 | Chitinophaga sp. R-73072 Hybrid assembly | Isolate | Unclassified |
| 167 | 2929921140 | Chitinophaga sp. R-72609 Hybrid assembly | Isolate | Unclassified |
| 168 | 2945977869 | Chitinophaga sp. W2I13 | Isolate | Rhizosphere |
| 169 | 2946013367 | Chitinophaga sp. W3I9 | Isolate | Rhizosphere |
| 170 | 8003151029 | Chitinophaga sp. GbtcB8 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.75 |
| Metatranscriptomes | 0 |
| Isolates | 6.25 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 17.19 |
| Nodule | 0 |
| Rhizoplane | 0.39 |
| Rhizosphere | 73.44 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.34 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_104926 | 2162886007 | Bacteria | 77416 |
| 2 | JGI24740J21852_10000349 | 3300001979 | Bacteria | 19736 |
| 3 | JGI25154J39366_1000014 | 3300002738 | Bacteria | 265287 |
| 4 | JGI25153J46596_10011336 | 3300003215 | Bacteria | 3946 |
| 5 | JGI25153J46596_10013617 | 3300003215 | Bacteria | 3426 |
| 6 | rootH1_10015414 | 3300003316 | Bacteria | 3802 |
| 7 | rootH2_10004718 | 3300003320 | Bacteria | 23099 |
| 8 | rootH2_10053860 | 3300003320 | Bacteria | 13115 |
| 9 | rootL2_10096232 | 3300003322 | Bacteria | 3140 |
| 10 | rootL2_10112594 | 3300003322 | Bacteria | 4442 |
| 11 | rootL2_10176697 | 3300003322 | Bacteria | 7455 |
| 12 | rootH1_10200657 | 3300003323 | Bacteria | 8741 |
| 13 | JGI25160J50197_1000337 | 3300003354 | Bacteria | 31907 |
| 14 | JGI25160J50197_1003893 | 3300003354 | Bacteria | 6545 |
| 15 | JGI25160J50197_1005917 | 3300003354 | Bacteria | 5023 |
| 16 | JGI25160J50197_1007849 | 3300003354 | Bacteria | 4128 |
| 17 | Ga0055535_1001066 | 3300003761 | Bacteria | 16874 |
| 18 | Ga0055542_1004156 | 3300003762 | Bacteria | 3634 |
| 19 | Ga0055528_1001909 | 3300003790 | Bacteria | 11827 |
| 20 | Ga0055530_10005286 | 3300003791 | Bacteria | 6204 |
| 21 | Ga0055531_10000055 | 3300003794 | Bacteria | 123621 |
| 22 | Ga0055531_10013422 | 3300003794 | Bacteria | 3775 |
| 23 | Ga0065165_1001274 | 3300005262 | Bacteria | 28506 |
| 24 | Ga0065704_10070133 | 3300005289 | Bacteria | 1266035 |
| 25 | Ga0065712_10076672 | 3300005290 | Unclassified | 3615 |
| 26 | Ga0070658_10053794 | 3300005327 | Bacteria | 3268 |
| 27 | Ga0070683_100027918 | 3300005329 | Bacteria | 5095 |
| 28 | Ga0070683_100035665 | 3300005329 | Bacteria | 4546 |
| 29 | Ga0070670_100015878 | 3300005331 | Bacteria | 6462 |
| 30 | Ga0068869_100024012 | 3300005334 | Bacteria | 4219 |
| 31 | Ga0070680_100006766 | 3300005336 | Bacteria | 8734 |
| 32 | Ga0068868_100044096 | 3300005338 | Bacteria | 3486 |
| 33 | Ga0070689_100055343 | 3300005340 | Unclassified | 3074 |
| 34 | Ga0070689_100057834 | 3300005340 | Bacteria | 3010 |
| 35 | Ga0070675_100005435 | 3300005354 | Bacteria | 9742 |
| 36 | Ga0070675_100042898 | 3300005354 | Unclassified | 3696 |
| 37 | Ga0070675_100064207 | 3300005354 | Unclassified | 3036 |
| 38 | Ga0070671_100006760 | 3300005355 | Bacteria | 9178 |
| 39 | Ga0070671_100120500 | 3300005355 | Bacteria | 2207 |
| 40 | Ga0070674_100036719 | 3300005356 | Bacteria | 3291 |
| 41 | Ga0070688_100023965 | 3300005365 | Bacteria | 3595 |
| 42 | Ga0070659_100005813 | 3300005366 | Bacteria | 8883 |
| 43 | Ga0070667_100013604 | 3300005367 | Bacteria | 6723 |
| 44 | Ga0070667_100054343 | 3300005367 | Bacteria | 3381 |
| 45 | Ga0070667_100083111 | 3300005367 | Bacteria | 2743 |
| 46 | Ga0070662_100024617 | 3300005457 | Bacteria | 4149 |
| 47 | Ga0070681_10073159 | 3300005458 | Bacteria | 3389 |
| 48 | Ga0070679_100006200 | 3300005530 | Bacteria | 11134 |
| 49 | Ga0070684_100001286 | 3300005535 | Bacteria | 17976 |
| 50 | Ga0070684_100019845 | 3300005535 | Bacteria | 5569 |
| 51 | Ga0070684_100075585 | 3300005535 | Bacteria | 2971 |
| 52 | Ga0070686_100049724 | 3300005544 | Bacteria | 2662 |
| 53 | Ga0070665_100000031 | 3300005548 | Bacteria | 333365 |
| 54 | Ga0070665_100008213 | 3300005548 | Bacteria | 10568 |
| 55 | Ga0070665_100104431 | 3300005548 | Bacteria | 2836 |
| 56 | Ga0068855_100004244 | 3300005563 | Bacteria | 17503 |
| 57 | Ga0068855_100047487 | 3300005563 | Bacteria | 5072 |
| 58 | Ga0068855_100057151 | 3300005563 | Bacteria | 4574 |
| 59 | Ga0070664_100035499 | 3300005564 | Bacteria | 4186 |
| 60 | Ga0070664_100115281 | 3300005564 | Bacteria | 2348 |
| 61 | Ga0068857_100023836 | 3300005577 | Bacteria | 5387 |
| 62 | Ga0068857_100104081 | 3300005577 | Bacteria | 2548 |
| 63 | Ga0068854_100019280 | 3300005578 | Bacteria | 4595 |
| 64 | Ga0068852_100000942 | 3300005616 | Bacteria | 19231 |
| 65 | Ga0068859_100003456 | 3300005617 | Bacteria | 16061 |
| 66 | Ga0068859_100036641 | 3300005617 | Bacteria | 4924 |
| 67 | Ga0068864_100050799 | 3300005618 | Bacteria | 3570 |
| 68 | Ga0068864_100076653 | 3300005618 | Bacteria | 2922 |
| 69 | Ga0068861_100030671 | 3300005719 | Bacteria | 3943 |
| 70 | Ga0068860_100001991 | 3300005843 | Bacteria | 21550 |
| 71 | Ga0068860_100085360 | 3300005843 | Bacteria | 3004 |
| 72 | Ga0068862_100002344 | 3300005844 | Bacteria | 16864 |
| 73 | Ga0097621_100000796 | 3300006237 | Bacteria | 22187 |
| 74 | Ga0097621_100086889 | 3300006237 | Bacteria | 2610 |
| 75 | Ga0068871_100000029 | 3300006358 | Bacteria | 77924 |
| 76 | Ga0075430_100001390 | 3300006846 | Bacteria | 19650 |
| 77 | Ga0075431_100050272 | 3300006847 | Bacteria | 4298 |
| 78 | Ga0075429_100004820 | 3300006880 | Bacteria | 11618 |
| 79 | Ga0075429_100008030 | 3300006880 | Bacteria | 9171 |
| 80 | Ga0097620_100003456 | 3300006931 | Bacteria | 16061 |
| 81 | Ga0097620_100036643 | 3300006931 | Bacteria | 4924 |
| 82 | Ga0105240_10000047 | 3300009093 | Bacteria | 239067 |
| 83 | Ga0105240_10001182 | 3300009093 | Bacteria | 45690 |
| 84 | Ga0111539_10031448 | 3300009094 | Bacteria | 6447 |
| 85 | Ga0114129_10024465 | 3300009147 | Bacteria | 8556 |
| 86 | Ga0105243_10116284 | 3300009148 | Bacteria | 2246 |
| 87 | Ga0105241_10000459 | 3300009174 | Bacteria | 30725 |
| 88 | Ga0105241_10117307 | 3300009174 | Bacteria | 2139 |
| 89 | Ga0105242_10037414 | 3300009176 | Bacteria | 3898 |
| 90 | Ga0105248_10001215 | 3300009177 | Bacteria | 28759 |
| 91 | Ga0105237_10017515 | 3300009545 | Bacteria | 7425 |
| 92 | Ga0105238_10001407 | 3300009551 | Bacteria | 24111 |
| 93 | Ga0105249_10003224 | 3300009553 | Bacteria | 14123 |
| 94 | Ga0105249_10006375 | 3300009553 | Bacteria | 10260 |
| 95 | Ga0105239_10001793 | 3300010375 | Bacteria | 28180 |
| 96 | Ga0105239_10004762 | 3300010375 | Bacteria | 16108 |
| 97 | Ga0105239_10025577 | 3300010375 | Bacteria | 6498 |
| 98 | Ga0105239_10106065 | 3300010375 | Bacteria | 3112 |
| 99 | Ga0105246_10110178 | 3300011119 | Bacteria | 2021 |
| 100 | Ga0157371_10005684 | 3300013102 | Bacteria | 10456 |
| 101 | Ga0157370_10001951 | 3300013104 | Bacteria | 25406 |
| 102 | Ga0157370_10005347 | 3300013104 | Bacteria | 14416 |
| 103 | Ga0157370_10005672 | 3300013104 | Bacteria | 13954 |
| 104 | Ga0157374_10037550 | 3300013296 | Bacteria | 4447 |
| 105 | Ga0157374_10056195 | 3300013296 | Bacteria | 3674 |
| 106 | Ga0157378_10017992 | 3300013297 | Bacteria | 6204 |
| 107 | Ga0157378_10020047 | 3300013297 | Bacteria | 5880 |
| 108 | Ga0157378_10065362 | 3300013297 | Bacteria | 3256 |
| 109 | Ga0157378_10207191 | 3300013297 | Unclassified | 1857 |
| 110 | Ga0163162_10005537 | 3300013306 | Bacteria | 12206 |
| 111 | Ga0163162_10008303 | 3300013306 | Bacteria | 10131 |
| 112 | Ga0163162_10020716 | 3300013306 | Bacteria | 6463 |
| 113 | Ga0163162_10056810 | 3300013306 | Bacteria | 3941 |
| 114 | Ga0163162_10102415 | 3300013306 | Bacteria | 2956 |
| 115 | Ga0157372_10002921 | 3300013307 | Bacteria | 18457 |
| 116 | Ga0157372_10026040 | 3300013307 | Bacteria | 6362 |
| 117 | Ga0157372_10027811 | 3300013307 | Bacteria | 6163 |
| 118 | Ga0157372_10034749 | 3300013307 | Bacteria | 5545 |
| 119 | Ga0157372_10068502 | 3300013307 | Bacteria | 3990 |
| 120 | Ga0157375_10001329 | 3300013308 | Bacteria | 21304 |
| 121 | Ga0157375_10007174 | 3300013308 | Bacteria | 9739 |
| 122 | Ga0157375_10074313 | 3300013308 | Bacteria | 3420 |
| 123 | Ga0163163_10000445 | 3300014325 | Bacteria | 37798 |
| 124 | Ga0163163_10083645 | 3300014325 | Bacteria | 3197 |
| 125 | Ga0157380_10001093 | 3300014326 | Bacteria | 17458 |
| 126 | Ga0157377_10019166 | 3300014745 | Bacteria | 3572 |
| 127 | Ga0157376_10002151 | 3300014969 | Bacteria | 13268 |
| 128 | Ga0157376_10007017 | 3300014969 | Bacteria | 7994 |
| 129 | Ga0157376_10008661 | 3300014969 | Bacteria | 7353 |
| 130 | Ga0157376_10048329 | 3300014969 | Bacteria | 3517 |
| 131 | Ga0182005_1000039 | 3300015265 | Bacteria | 155210 |
| 132 | Ga0163161_10001556 | 3300017792 | Bacteria | 16932 |
| 133 | Ga0163161_10007502 | 3300017792 | Bacteria | 7537 |
| 134 | Ga0209436_102485 | 3300025208 | Bacteria | 5508 |
| 135 | Ga0209436_103804 | 3300025208 | Bacteria | 3894 |
| 136 | Ga0209258_100195 | 3300025242 | Bacteria | 124409 |
| 137 | Ga0209646_1000002 | 3300025246 | Bacteria | 1425781 |
| 138 | Ga0209026_1000611 | 3300025250 | Bacteria | 22913 |
| 139 | Ga0209148_1000249 | 3300025254 | Bacteria | 85917 |
| 140 | Ga0209673_1000261 | 3300025273 | Bacteria | 99491 |
| 141 | Ga0209130_1002693 | 3300025284 | Bacteria | 8461 |
| 142 | Ga0209564_1003066 | 3300025295 | Bacteria | 11866 |
| 143 | Ga0209758_1002597 | 3300025297 | Bacteria | 18092 |
| 144 | Ga0209758_1004528 | 3300025297 | Bacteria | 11505 |
| 145 | Ga0209758_1015292 | 3300025297 | Bacteria | 3989 |
| 146 | Ga0209050_1000577 | 3300025298 | Bacteria | 59430 |
| 147 | Ga0207426_1000192 | 3300025302 | Bacteria | 151680 |
| 148 | Ga0207426_1000448 | 3300025302 | Bacteria | 65983 |
| 149 | Ga0207426_1001820 | 3300025302 | Bacteria | 15789 |
| 150 | Ga0207426_1003630 | 3300025302 | Bacteria | 8166 |
| 151 | Ga0209257_1000025 | 3300025304 | Bacteria | 724838 |
| 152 | Ga0209257_1001838 | 3300025304 | Bacteria | 23154 |
| 153 | Ga0207642_10009020 | 3300025899 | Bacteria | 3452 |
| 154 | Ga0207688_10020403 | 3300025901 | Bacteria | 3618 |
| 155 | Ga0207680_10056080 | 3300025903 | Bacteria | 2378 |
| 156 | Ga0207647_10005327 | 3300025904 | Bacteria | 9453 |
| 157 | Ga0207647_10044503 | 3300025904 | Bacteria | 2773 |
| 158 | Ga0207647_10079030 | 3300025904 | Bacteria | 1975 |
| 159 | Ga0207654_10002595 | 3300025911 | Bacteria | 9166 |
| 160 | Ga0207707_10016153 | 3300025912 | Bacteria | 6512 |
| 161 | Ga0207695_10000010 | 3300025913 | Bacteria | 981919 |
| 162 | Ga0207695_10000077 | 3300025913 | Bacteria | 307107 |
| 163 | Ga0207695_10000833 | 3300025913 | Bacteria | 57159 |
| 164 | Ga0207695_10025764 | 3300025913 | Bacteria | 6575 |
| 165 | Ga0207671_10000025 | 3300025914 | Bacteria | 271617 |
| 166 | Ga0207671_10008912 | 3300025914 | Bacteria | 8449 |
| 167 | Ga0207657_10016130 | 3300025919 | Bacteria | 7213 |
| 168 | Ga0207657_10021766 | 3300025919 | Bacteria | 6025 |
| 169 | Ga0207657_10046455 | 3300025919 | Bacteria | 3803 |
| 170 | Ga0207652_10000871 | 3300025921 | Bacteria | 28598 |
| 171 | Ga0207659_10009334 | 3300025926 | Bacteria | 6124 |
| 172 | Ga0207659_10020344 | 3300025926 | Bacteria | 4386 |
| 173 | Ga0207706_10005480 | 3300025933 | Bacteria | 11831 |
| 174 | Ga0207670_10002458 | 3300025936 | Bacteria | 9717 |
| 175 | Ga0207691_10100734 | 3300025940 | Bacteria | 2578 |
| 176 | Ga0207689_10024979 | 3300025942 | Bacteria | 5008 |
| 177 | Ga0207679_10028464 | 3300025945 | Bacteria | 3878 |
| 178 | Ga0207667_10064102 | 3300025949 | Bacteria | 3838 |
| 179 | Ga0207667_10097458 | 3300025949 | Bacteria | 3035 |
| 180 | Ga0207651_10085455 | 3300025960 | Bacteria | 2289 |
| 181 | Ga0207712_10003889 | 3300025961 | Bacteria | 9438 |
| 182 | Ga0207658_10008928 | 3300025986 | Bacteria | 6798 |
| 183 | Ga0207658_10052757 | 3300025986 | Bacteria | 3002 |
| 184 | Ga0207648_10089256 | 3300026089 | Bacteria | 2692 |
| 185 | Ga0207648_10096280 | 3300026089 | Unclassified | 2590 |
| 186 | Ga0207648_10118330 | 3300026089 | Bacteria | 2329 |
| 187 | Ga0207676_10038869 | 3300026095 | Bacteria | 3635 |
| 188 | Ga0207676_10042794 | 3300026095 | Bacteria | 3484 |
| 189 | Ga0207676_10077991 | 3300026095 | Bacteria | 2681 |
| 190 | Ga0207674_10040587 | 3300026116 | Bacteria | 4820 |
| 191 | Ga0207675_100009332 | 3300026118 | Bacteria | 9197 |
| 192 | Ga0207683_10003149 | 3300026121 | Bacteria | 14417 |
| 193 | Ga0207698_10009417 | 3300026142 | Bacteria | 6229 |
| 194 | Ga0268266_10000088 | 3300028379 | Bacteria | 199029 |
| 195 | Ga0268266_10006602 | 3300028379 | Bacteria | 10590 |
| 196 | Ga0268264_10032242 | 3300028381 | Bacteria | 4298 |
| 197 | Ga0268264_10039577 | 3300028381 | Bacteria | 3895 |
| 198 | Ga0265327_10000010 | 3300031251 | Bacteria | 566817 |
| 199 | Ga0265327_10000192 | 3300031251 | Bacteria | 129439 |
| 200 | Ga0307416_100001580 | 3300032002 | Bacteria | 12492 |
| 201 | Ga0395899_0012110 | 3300037312 | Bacteria | 6604 |
| 202 | Ga0395898_0032237 | 3300037466 | Bacteria | 5229 |
| 203 | Ga0466972_0016790 | 3300044658 | Bacteria | 3660 |
| 204 | Ga0453684_0023466 | 3300044712 | Bacteria | 9082 |
| 205 | Ga0466968_0017417 | 3300044735 | Bacteria | 2872 |
| 206 | Ga0466957_0002742 | 3300044842 | Bacteria | 9530 |
| 207 | Ga0495627_000481 | 3300046453 | Bacteria | 33758 |
| 208 | Ga0495648_0000294 | 3300046524 | Bacteria | 55789 |
| 209 | Ga0495633_0000005 | 3300046558 | Bacteria | 357644 |
| 210 | Ga0495668_0000057 | 3300046616 | Bacteria | 196557 |
| 211 | Ga0496101_0043358 | 3300048904 | Bacteria | 3216 |
| 212 | Ga0496121_0000020 | 3300048924 | Bacteria | 498732 |
| 213 | Ga0501032_0007367 | 3300049569 | Bacteria | 8039 |
| 214 | Ga0501033_0097127 | 3300049570 | Bacteria | 2153 |
| 215 | Ga0501034_0000225 | 3300049571 | Bacteria | 107163 |
| 216 | Ga0501034_0007762 | 3300049571 | Bacteria | 11410 |
| 217 | Ga0501034_0022063 | 3300049571 | Bacteria | 6486 |
| 218 | Ga0501043_0005040 | 3300049579 | Bacteria | 10683 |
| 219 | Ga0501047_0020147 | 3300049581 | Bacteria | 6403 |
| 220 | Ga0501219_000090 | 3300049703 | Bacteria | 15687 |
| 221 | Ga0501241_000557 | 3300049758 | Bacteria | 7987 |
| 222 | Ga0501044_0018771 | 3300049823 | Bacteria | 7408 |
| 223 | Ga0501044_0083146 | 3300049823 | Bacteria | 3238 |
| 224 | Ga0501284_00028 | 3300050005 | Bacteria | 76036 |
| 225 | nmdc:mga05p37_13307_c1 | 3300050507 | Bacteria | 9854 |
| 226 | nmdc:mga09592_5505_c1 | 3300050508 | Bacteria | 10300 |
| 227 | Ga0500644_0000234 | 3300053088 | Bacteria | 31420 |
| 228 | Ga0500556_0008693 | 3300053104 | Bacteria | 2934 |
| 229 | Ga0500562_000017 | 3300053108 | Bacteria | 130556 |
| 230 | Ga0500569_000423 | 3300053109 | Bacteria | 6897 |
| 231 | Ga0500607_018537 | 3300053121 | Bacteria | 3951 |
| 232 | Ga0500642_0011069 | 3300053130 | Bacteria | 3211 |
| 233 | Ga0500652_001242 | 3300053131 | Bacteria | 8091 |
| 234 | Ga0500658_0017849 | 3300053134 | Bacteria | 2654 |
| 235 | Ga0500577_0000592 | 3300053142 | Bacteria | 9336 |
| 236 | Ga0500616_0010074 | 3300053153 | Bacteria | 5678 |
| 237 | Ga0500622_0000321 | 3300053156 | Bacteria | 48260 |
| 238 | Ga0500622_0001419 | 3300053156 | Bacteria | 19292 |
| 239 | Ga0500622_0002108 | 3300053156 | Bacteria | 14826 |
| 240 | Ga0500636_0010921 | 3300053177 | Bacteria | 5309 |
| 241 | 2883072829 | 2883068021 | Bacteria | 6192739 |
| 242 | 2738730380 | 2738541278 | Bacteria | 9755573 |
| 243 | 2819574000 | 2818991442 | Bacteria | 8318214 |
| 244 | 2819680344 | 2818991460 | Bacteria | 7595395 |
| 245 | 2821137315 | 2821136567 | Bacteria | 8080116 |
| 246 | 2840677395 | 2840677318 | Bacteria | 2664183 |
| 247 | 2884798251 | 2884791551 | Bacteria | 8511252 |
| 248 | 2896085213 | 2896085136 | Bacteria | 6129793 |
| 249 | 2896115142 | 2896109856 | Bacteria | 7140722 |
| 250 | 2904467944 | 2904467357 | Bacteria | 8057758 |
| 251 | 2929182638 | 2929177148 | Bacteria | 7883697 |
| 252 | 2929241628 | 2929239360 | Bacteria | 7745570 |
| 253 | 2929923585 | 2929921140 | Bacteria | 8649150 |
| 254 | 2945978563 | 2945977869 | Bacteria | 7777518 |
| 255 | 2946015575 | 2946013367 | Bacteria | 7766675 |
| 256 | 8003157480 | 8003151029 | Bacteria | 8187759 |
| 257 | SwRhRL2b_contig_104926 | |||
| 258 | JGI24740J21852_10000349 | |||
| 259 | JGI25154J39366_1000014 | |||
| 260 | JGI25153J46596_10011336 | |||
| 261 | JGI25153J46596_10013617 | |||
| 262 | rootH1_10015414 | |||
| 263 | rootH2_10004718 | |||
| 264 | rootH2_10053860 | |||
| 265 | rootL2_10096232 | |||
| 266 | rootL2_10112594 | |||
| 267 | rootL2_10176697 | |||
| 268 | rootH1_10200657 | |||
| 269 | JGI25160J50197_1000337 | |||
| 270 | JGI25160J50197_1003893 | |||
| 271 | JGI25160J50197_1005917 | |||
| 272 | JGI25160J50197_1007849 | |||
| 273 | Ga0055535_1001066 | |||
| 274 | Ga0055542_1004156 | |||
| 275 | Ga0055528_1001909 | |||
| 276 | Ga0055530_10005286 | |||
| 277 | Ga0055531_10000055 | |||
| 278 | Ga0055531_10013422 | |||
| 279 | Ga0065165_1001274 | |||
| 280 | Ga0065704_10070133 | |||
| 281 | Ga0065712_10076672 | |||
| 282 | Ga0070658_10053794 | |||
| 283 | Ga0070683_100027918 | |||
| 284 | Ga0070683_100035665 | |||
| 285 | Ga0070670_100015878 | |||
| 286 | Ga0068869_100024012 | |||
| 287 | Ga0070680_100006766 | |||
| 288 | Ga0068868_100044096 | |||
| 289 | Ga0070689_100055343 | |||
| 290 | Ga0070689_100057834 | |||
| 291 | Ga0070675_100005435 | |||
| 292 | Ga0070675_100042898 | |||
| 293 | Ga0070675_100064207 | |||
| 294 | Ga0070671_100006760 | |||
| 295 | Ga0070671_100120500 | |||
| 296 | Ga0070674_100036719 | |||
| 297 | Ga0070688_100023965 | |||
| 298 | Ga0070659_100005813 | |||
| 299 | Ga0070667_100013604 | |||
| 300 | Ga0070667_100054343 | |||
| 301 | Ga0070667_100083111 | |||
| 302 | Ga0070662_100024617 | |||
| 303 | Ga0070681_10073159 | |||
| 304 | Ga0070679_100006200 | |||
| 305 | Ga0070684_100001286 | |||
| 306 | Ga0070684_100019845 | |||
| 307 | Ga0070684_100075585 | |||
| 308 | Ga0070686_100049724 | |||
| 309 | Ga0070665_100000031 | |||
| 310 | Ga0070665_100008213 | |||
| 311 | Ga0070665_100104431 | |||
| 312 | Ga0068855_100004244 | |||
| 313 | Ga0068855_100047487 | |||
| 314 | Ga0068855_100057151 | |||
| 315 | Ga0070664_100035499 | |||
| 316 | Ga0070664_100115281 | |||
| 317 | Ga0068857_100023836 | |||
| 318 | Ga0068857_100104081 | |||
| 319 | Ga0068854_100019280 | |||
| 320 | Ga0068852_100000942 | |||
| 321 | Ga0068859_100003456 | |||
| 322 | Ga0068859_100036641 | |||
| 323 | Ga0068864_100050799 | |||
| 324 | Ga0068864_100076653 | |||
| 325 | Ga0068861_100030671 | |||
| 326 | Ga0068860_100001991 | |||
| 327 | Ga0068860_100085360 | |||
| 328 | Ga0068862_100002344 | |||
| 329 | Ga0097621_100000796 | |||
| 330 | Ga0097621_100086889 | |||
| 331 | Ga0068871_100000029 | |||
| 332 | Ga0075430_100001390 | |||
| 333 | Ga0075431_100050272 | |||
| 334 | Ga0075429_100004820 | |||
| 335 | Ga0075429_100008030 | |||
| 336 | Ga0097620_100003456 | |||
| 337 | Ga0097620_100036643 | |||
| 338 | Ga0105240_10000047 | |||
| 339 | Ga0105240_10001182 | |||
| 340 | Ga0111539_10031448 | |||
| 341 | Ga0114129_10024465 | |||
| 342 | Ga0105243_10116284 | |||
| 343 | Ga0105241_10000459 | |||
| 344 | Ga0105241_10117307 | |||
| 345 | Ga0105242_10037414 | |||
| 346 | Ga0105248_10001215 | |||
| 347 | Ga0105237_10017515 | |||
| 348 | Ga0105238_10001407 | |||
| 349 | Ga0105249_10003224 | |||
| 350 | Ga0105249_10006375 | |||
| 351 | Ga0105239_10001793 | |||
| 352 | Ga0105239_10004762 | |||
| 353 | Ga0105239_10025577 | |||
| 354 | Ga0105239_10106065 | |||
| 355 | Ga0105246_10110178 | |||
| 356 | Ga0157371_10005684 | |||
| 357 | Ga0157370_10001951 | |||
| 358 | Ga0157370_10005347 | |||
| 359 | Ga0157370_10005672 | |||
| 360 | Ga0157374_10037550 | |||
| 361 | Ga0157374_10056195 | |||
| 362 | Ga0157378_10017992 | |||
| 363 | Ga0157378_10020047 | |||
| 364 | Ga0157378_10065362 | |||
| 365 | Ga0157378_10207191 | |||
| 366 | Ga0163162_10005537 | |||
| 367 | Ga0163162_10008303 | |||
| 368 | Ga0163162_10020716 | |||
| 369 | Ga0163162_10056810 | |||
| 370 | Ga0163162_10102415 | |||
| 371 | Ga0157372_10002921 | |||
| 372 | Ga0157372_10026040 | |||
| 373 | Ga0157372_10027811 | |||
| 374 | Ga0157372_10034749 | |||
| 375 | Ga0157372_10068502 | |||
| 376 | Ga0157375_10001329 | |||
| 377 | Ga0157375_10007174 | |||
| 378 | Ga0157375_10074313 | |||
| 379 | Ga0163163_10000445 | |||
| 380 | Ga0163163_10083645 | |||
| 381 | Ga0157380_10001093 | |||
| 382 | Ga0157377_10019166 | |||
| 383 | Ga0157376_10002151 | |||
| 384 | Ga0157376_10007017 | |||
| 385 | Ga0157376_10008661 | |||
| 386 | Ga0157376_10048329 | |||
| 387 | Ga0182005_1000039 | |||
| 388 | Ga0163161_10001556 | |||
| 389 | Ga0163161_10007502 | |||
| 390 | Ga0209436_102485 | |||
| 391 | Ga0209436_103804 | |||
| 392 | Ga0209258_100195 | |||
| 393 | Ga0209646_1000002 | |||
| 394 | Ga0209026_1000611 | |||
| 395 | Ga0209148_1000249 | |||
| 396 | Ga0209673_1000261 | |||
| 397 | Ga0209130_1002693 | |||
| 398 | Ga0209564_1003066 | |||
| 399 | Ga0209758_1002597 | |||
| 400 | Ga0209758_1004528 | |||
| 401 | Ga0209758_1015292 | |||
| 402 | Ga0209050_1000577 | |||
| 403 | Ga0207426_1000192 | |||
| 404 | Ga0207426_1000448 | |||
| 405 | Ga0207426_1001820 | |||
| 406 | Ga0207426_1003630 | |||
| 407 | Ga0209257_1000025 | |||
| 408 | Ga0209257_1001838 | |||
| 409 | Ga0207642_10009020 | |||
| 410 | Ga0207688_10020403 | |||
| 411 | Ga0207680_10056080 | |||
| 412 | Ga0207647_10005327 | |||
| 413 | Ga0207647_10044503 | |||
| 414 | Ga0207647_10079030 | |||
| 415 | Ga0207654_10002595 | |||
| 416 | Ga0207707_10016153 | |||
| 417 | Ga0207695_10000010 | |||
| 418 | Ga0207695_10000077 | |||
| 419 | Ga0207695_10000833 | |||
| 420 | Ga0207695_10025764 | |||
| 421 | Ga0207671_10000025 | |||
| 422 | Ga0207671_10008912 | |||
| 423 | Ga0207657_10016130 | |||
| 424 | Ga0207657_10021766 | |||
| 425 | Ga0207657_10046455 | |||
| 426 | Ga0207652_10000871 | |||
| 427 | Ga0207659_10009334 | |||
| 428 | Ga0207659_10020344 | |||
| 429 | Ga0207706_10005480 | |||
| 430 | Ga0207670_10002458 | |||
| 431 | Ga0207691_10100734 | |||
| 432 | Ga0207689_10024979 | |||
| 433 | Ga0207679_10028464 | |||
| 434 | Ga0207667_10064102 | |||
| 435 | Ga0207667_10097458 | |||
| 436 | Ga0207651_10085455 | |||
| 437 | Ga0207712_10003889 | |||
| 438 | Ga0207658_10008928 | |||
| 439 | Ga0207658_10052757 | |||
| 440 | Ga0207648_10089256 | |||
| 441 | Ga0207648_10096280 | |||
| 442 | Ga0207648_10118330 | |||
| 443 | Ga0207676_10038869 | |||
| 444 | Ga0207676_10042794 | |||
| 445 | Ga0207676_10077991 | |||
| 446 | Ga0207674_10040587 | |||
| 447 | Ga0207675_100009332 | |||
| 448 | Ga0207683_10003149 | |||
| 449 | Ga0207698_10009417 | |||
| 450 | Ga0268266_10000088 | |||
| 451 | Ga0268266_10006602 | |||
| 452 | Ga0268264_10032242 | |||
| 453 | Ga0268264_10039577 | |||
| 454 | Ga0265327_10000010 | |||
| 455 | Ga0265327_10000192 | |||
| 456 | Ga0307416_100001580 | |||
| 457 | Ga0395899_0012110 | |||
| 458 | Ga0395898_0032237 | |||
| 459 | Ga0466972_0016790 | |||
| 460 | Ga0453684_0023466 | |||
| 461 | Ga0466968_0017417 | |||
| 462 | Ga0466957_0002742 | |||
| 463 | Ga0495627_000481 | |||
| 464 | Ga0495648_0000294 | |||
| 465 | Ga0495633_0000005 | |||
| 466 | Ga0495668_0000057 | |||
| 467 | Ga0496101_0043358 | |||
| 468 | Ga0496121_0000020 | |||
| 469 | Ga0501032_0007367 | |||
| 470 | Ga0501033_0097127 | |||
| 471 | Ga0501034_0000225 | |||
| 472 | Ga0501034_0007762 | |||
| 473 | Ga0501034_0022063 | |||
| 474 | Ga0501043_0005040 | |||
| 475 | Ga0501047_0020147 | |||
| 476 | Ga0501219_000090 | |||
| 477 | Ga0501241_000557 | |||
| 478 | Ga0501044_0018771 | |||
| 479 | Ga0501044_0083146 | |||
| 480 | Ga0501284_00028 | |||
| 481 | nmdc:mga05p37_13307_c1 | |||
| 482 | nmdc:mga09592_5505_c1 | |||
| 483 | Ga0500644_0000234 | |||
| 484 | Ga0500556_0008693 | |||
| 485 | Ga0500562_000017 | |||
| 486 | Ga0500569_000423 | |||
| 487 | Ga0500607_018537 | |||
| 488 | Ga0500642_0011069 | |||
| 489 | Ga0500652_001242 | |||
| 490 | Ga0500658_0017849 | |||
| 491 | Ga0500577_0000592 | |||
| 492 | Ga0500616_0010074 | |||
| 493 | Ga0500622_0000321 | |||
| 494 | Ga0500622_0001419 | |||
| 495 | Ga0500622_0002108 | |||
| 496 | Ga0500636_0010921 | |||
| 497 | 2883072829 | |||
| 498 | 2738730380 | |||
| 499 | 2819574000 | |||
| 500 | 2819680344 | |||
| 501 | 2821137315 | |||
| 502 | 2840677395 | |||
| 503 | 2884798251 | |||
| 504 | 2896085213 | |||
| 505 | 2896115142 | |||
| 506 | 2904467944 | |||
| 507 | 2929182638 | |||
| 508 | 2929241628 | |||
| 509 | 2929923585 | |||
| 510 | 2945978563 | |||
| 511 | 2946015575 | |||
| 512 | 8003157480 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6ao8-assembly1.cif.gz_A | crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine | 0.8809 | 1 | 599 |
| 6ao8-assembly1.cif.gz_A | crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine | 0.8765 | 1 | 599 |
| 5yym-assembly1.cif.gz_A | crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg | 0.8749 | 1 | 599 |
| 5yym-assembly2.cif.gz_B | crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg | 0.867 | 1 | 599 |
| 5yym-assembly1.cif.gz_A | crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg | 0.8622 | 1 | 599 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P11875_454_577_1.10.730.10 | Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 | 0.9322 | 471 | 599 | 1.10.730.10 |
| af_P38714_519_643_1.10.730.10 | Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 | 0.926 | 471 | 599 | 1.10.730.10 |
| af_P11875_454_577_1.10.730.10 | Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 | 0.925 | 471 | 599 | 1.10.730.10 |
| af_P38714_519_643_1.10.730.10 | Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 | 0.9189 | 471 | 599 | 1.10.730.10 |
| af_Q05506_483_607_1.10.730.10 | Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 | 0.9136 | 471 | 599 | 1.10.730.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A9DIM0-F1-model_v4 | Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) | 0.9724 | 1 | 599 |
GO:0004814
GO:0005524 GO:0005737 GO:0006420 |
| AF-A9DIM0-F1-model_v4 | Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) | 0.9708 | 1 | 599 |
GO:0004814
GO:0005524 GO:0005737 GO:0006420 |
| AF-A0A4P5SZ28-F1-model_v4 | Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) | 0.9687 | 1 | 599 |
GO:0004814
GO:0005524 GO:0005737 GO:0006420 |
| AF-A0A359B0M7-F1-model_v4 | Arginine--tRNA ligase | 0.9685 | 272 | 354 |
GO:0016874
|
| AF-A0A2D7VSF8-F1-model_v4 | Arginine--tRNA ligase (EC 6.1.1.19) | 0.9676 | 77 | 599 |
GO:0004814
GO:0005524 GO:0005737 GO:0006420 |