F367165

General Info

Members Datasets Scaffolds Average Seq Length
257 200 514 323

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100057584|Ga0068859_1000575844
Length 360
Sequence MARRPTAAQRYRVSQEKRRQLPRMGAAFSMLVHSPDVRQRNDSPNAPSPTDDMVWVPGATFRMGSDSHYPEEGPAHRVAVDGFWIDRHPVTNERFARFVAETGHVTFAEIPPNVADYPHAIPELLHPGSLVFRKPPGRVDLRHIGSWWEFCLGADWRHPGGPGTTLEQLASHPVVHVAYGDAIAFATWEGKSLPTEAEWEFAARGGLDGAKFAWGDQLMPNGRPMANFWQGEFPHENTLIDGWEGTSPVGTYSANGYGIHDMIGNVWEWTDDWYMPRHDAGDTRKACCIPRNPRGGAMGESFDPRHPDMKIPRKVLKGGSHLCSENYCMRYRPAARFPEPIDTSTSHVGFRCIIRPAPAA

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
25 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
26 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
69 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
120 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
121 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
122 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
123 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
124 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
129 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
130 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
131 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
135 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
136 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
143 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
144 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
145 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
146 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
147 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
148 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
149 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
150 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
151 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
159 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
160 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
161 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
162 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
168 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
169 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
174 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
175 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
176 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
177 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
178 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
179 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
183 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
186 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
187 2643221734 Bosea sp. Root670 Isolate Unclassified
188 2643221736 Bosea sp. Root483D1 Isolate Unclassified
189 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
190 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
191 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
192 2851182111 Bosea sp. Tri-44 Isolate Nodule
193 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
194 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
195 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
196 2941479691
197 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
198 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
199 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
200 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.61
Metatranscriptomes 1.17
Isolates 6.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.56
Nodule 3.11
Rhizoplane 2.33
Rhizosphere 72.37
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100057584 3300005617 Bacteria 3914
2 JGI25159J45721_1000096 3300002987 Bacteria 41782
3 JGI25159J45721_1000150 3300002987 Bacteria 32467
4 JGI25406J46586_10026587 3300003203 Bacteria 2229
5 JGI25153J46596_10000249 3300003215 Bacteria 44163
6 JGI25153J46596_10001599 3300003215 Bacteria 13428
7 JGI25160J50197_1000070 3300003354 Bacteria 110748
8 JGI25161J50226_1000026 3300003374 Bacteria 146134
9 Ga0055526_1000399 3300003771 Bacteria 35090
10 Ga0055524_1003933 3300003775 Bacteria 7034
11 Ga0055528_1011785 3300003790 Bacteria 3442
12 Ga0055540_1000581 3300003792 Bacteria 26766
13 Ga0055543_1000042 3300004625 Bacteria 117438
14 Ga0058863_11504797 3300004799 Bacteria 2642
15 Ga0058861_11553195 3300004800 Bacteria 1925
16 Ga0058862_12878892 3300004803 Bacteria 6275
17 Ga0065165_1000512 3300005262 Bacteria 59678
18 Ga0070658_10003661 3300005327 Bacteria 12586
19 Ga0070683_100014280 3300005329 Bacteria 6943
20 Ga0070683_100020797 3300005329 Bacteria 5847
21 Ga0070683_100178619 3300005329 Bacteria 2015
22 Ga0070683_100196253 3300005329 Bacteria 1917
23 Ga0070690_100045867 3300005330 Bacteria 2778
24 Ga0070670_100034883 3300005331 Bacteria 4330
25 Ga0068869_100046981 3300005334 Bacteria 3116
26 Ga0068869_100128727 3300005334 Bacteria 1944
27 Ga0070666_10190764 3300005335 Bacteria 1440
28 Ga0070680_100011039 3300005336 Bacteria 6981
29 Ga0070660_100052264 3300005339 Bacteria 3150
30 Ga0070689_100137197 3300005340 Bacteria 1965
31 Ga0070687_100019178 3300005343 Bacteria 3178
32 Ga0070661_100272746 3300005344 Bacteria 1310
33 Ga0070668_100151904 3300005347 Bacteria 1873
34 Ga0070675_100005086 3300005354 Bacteria 10036
35 Ga0070675_100024825 3300005354 Bacteria 4801
36 Ga0070674_100052990 3300005356 Bacteria 2800
37 Ga0070673_100274448 3300005364 Bacteria 1477
38 Ga0070688_100089625 3300005365 Bacteria 2007
39 Ga0070659_100084666 3300005366 Bacteria 2535
40 Ga0070667_100001643 3300005367 Bacteria 19988
41 Ga0070667_100043429 3300005367 Bacteria 3772
42 Ga0070667_100078017 3300005367 Bacteria 2829
43 Ga0070667_100078309 3300005367 Bacteria 2824
44 Ga0070662_100175725 3300005457 Bacteria 1685
45 Ga0070681_10004885 3300005458 Bacteria 12858
46 Ga0068867_100050119 3300005459 Bacteria 3076
47 Ga0068867_100262310 3300005459 Bacteria 1409
48 Ga0070679_100001163 3300005530 Bacteria 23048
49 Ga0070679_100083665 3300005530 Bacteria 3179
50 Ga0070684_100000814 3300005535 Bacteria 21770
51 Ga0070684_100106612 3300005535 Bacteria 2509
52 Ga0070684_100252856 3300005535 Bacteria 1611
53 Ga0070672_100018213 3300005543 Bacteria 5072
54 Ga0070665_100001353 3300005548 Bacteria 29032
55 Ga0070665_100051983 3300005548 Bacteria 4110
56 Ga0070665_100131034 3300005548 Bacteria 2510
57 Ga0070664_100020012 3300005564 Bacteria 5509
58 Ga0070664_100045143 3300005564 Bacteria 3722
59 Ga0070664_100194719 3300005564 Bacteria 1807
60 Ga0068857_100006825 3300005577 Bacteria 9826
61 Ga0068857_100147841 3300005577 Bacteria 2127
62 Ga0068854_100176965 3300005578 Bacteria 1664
63 Ga0070702_100182639 3300005615 Bacteria 1374
64 Ga0068859_100128957 3300005617 Bacteria 2600
65 Ga0068870_10094700 3300005840 Bacteria 1676
66 Ga0068860_100118257 3300005843 Bacteria 2537
67 Ga0068860_100165054 3300005843 Bacteria 2137
68 Ga0081539_10003223 3300005985 Bacteria 20591
69 Ga0075369_10059538 3300006186 Bacteria 1664
70 Ga0075428_100115100 3300006844 Bacteria 2929
71 Ga0075430_100008239 3300006846 Bacteria 8802
72 Ga0075431_100003652 3300006847 Bacteria 14922
73 Ga0075431_100017756 3300006847 Bacteria 7234
74 Ga0075429_100009896 3300006880 Bacteria 8267
75 Ga0068865_100060789 3300006881 Bacteria 2646
76 Ga0097620_100057588 3300006931 Bacteria 3914
77 Ga0097620_100128959 3300006931 Bacteria 2600
78 Ga0111539_10005081 3300009094 Bacteria 17086
79 Ga0111539_10049736 3300009094 Bacteria 4998
80 Ga0114129_10000054 3300009147 Bacteria 99951
81 Ga0114129_10095396 3300009147 Bacteria 4120
82 Ga0114129_10780526 3300009147 Bacteria 1221
83 Ga0105243_10017124 3300009148 Bacteria 5481
84 Ga0105243_10104369 3300009148 Bacteria 2359
85 Ga0105242_10018590 3300009176 Bacteria 5436
86 Ga0105242_10205341 3300009176 Bacteria 1752
87 Ga0105248_10037370 3300009177 Bacteria 5433
88 Ga0105248_10114075 3300009177 Bacteria 3048
89 Ga0105248_10219179 3300009177 Bacteria 2142
90 Ga0105249_10143237 3300009553 Bacteria 2294
91 Ga0105249_10552602 3300009553 Bacteria 1202
92 Ga0157371_10101197 3300013102 Bacteria 2044
93 Ga0157369_10362442 3300013105 Bacteria 1505
94 Ga0171462_1013 3300013250 Bacteria 202864
95 Ga0163162_10063243 3300013306 Bacteria 3742
96 Ga0157372_10035589 3300013307 Bacteria 5482
97 Ga0157375_10009966 3300013308 Bacteria 8355
98 Ga0157375_10035172 3300013308 Bacteria 4780
99 Ga0163163_10089770 3300014325 Bacteria 3086
100 Ga0207425_1000558 3300025245 Bacteria 22120
101 Ga0207425_1002224 3300025245 Bacteria 7036
102 Ga0209129_1000092 3300025258 Bacteria 173874
103 Ga0209673_1000987 3300025273 Bacteria 34806
104 Ga0209130_1000073 3300025284 Bacteria 174439
105 Ga0209025_1019429 3300025294 Bacteria 3780
106 Ga0209564_1000168 3300025295 Bacteria 158368
107 Ga0209758_1000201 3300025297 Bacteria 132855
108 Ga0209256_1000102 3300025299 Bacteria 199097
109 Ga0209256_1002173 3300025299 Bacteria 16844
110 Ga0207426_1000140 3300025302 Bacteria 195664
111 Ga0209051_1001138 3300025303 Bacteria 24291
112 Ga0209257_1011055 3300025304 Bacteria 4425
113 Ga0207642_10085191 3300025899 Bacteria 1546
114 Ga0207680_10219068 3300025903 Bacteria 1304
115 Ga0207645_10163079 3300025907 Bacteria 1459
116 Ga0207643_10021652 3300025908 Bacteria 3535
117 Ga0207705_10009222 3300025909 Bacteria 7184
118 Ga0207707_10004525 3300025912 Bacteria 12225
119 Ga0207660_10011643 3300025917 Bacteria 5735
120 Ga0207662_10057172 3300025918 Bacteria 2331
121 Ga0207657_10062476 3300025919 Bacteria 3188
122 Ga0207649_10028008 3300025920 Bacteria 3314
123 Ga0207652_10005811 3300025921 Bacteria 10004
124 Ga0207681_10011611 3300025923 Bacteria 5414
125 Ga0207659_10047291 3300025926 Bacteria 3043
126 Ga0207659_10088822 3300025926 Bacteria 2303
127 Ga0207644_10055012 3300025931 Bacteria 2868
128 Ga0207706_10179564 3300025933 Bacteria 1859
129 Ga0207669_10007172 3300025937 Bacteria 5133
130 Ga0207669_10105910 3300025937 Bacteria 1872
131 Ga0207704_10006347 3300025938 Bacteria 5508
132 Ga0207691_10030857 3300025940 Bacteria 5006
133 Ga0207691_10076045 3300025940 Bacteria 3026
134 Ga0207689_10066957 3300025942 Bacteria 2952
135 Ga0207689_10153024 3300025942 Bacteria 1901
136 Ga0207661_10018245 3300025944 Bacteria 5211
137 Ga0207661_10049642 3300025944 Bacteria 3340
138 Ga0207679_10041774 3300025945 Bacteria 3291
139 Ga0207679_10104173 3300025945 Bacteria 2225
140 Ga0207712_10157797 3300025961 Bacteria 1759
141 Ga0207712_10314715 3300025961 Bacteria 1289
142 Ga0207668_10000003 3300025972 Bacteria 206959
143 Ga0207640_10187319 3300025981 Bacteria 1557
144 Ga0207658_10004355 3300025986 Bacteria 9847
145 Ga0207658_10076127 3300025986 Bacteria 2556
146 Ga0207708_10177745 3300026075 Bacteria 1689
147 Ga0207648_10074128 3300026089 Bacteria 2966
148 Ga0207648_10303097 3300026089 Bacteria 1433
149 Ga0207676_10027748 3300026095 Bacteria 4221
150 Ga0207674_10004876 3300026116 Bacteria 16058
151 Ga0207674_10184343 3300026116 Bacteria 2038
152 Ga0207675_100285389 3300026118 Bacteria 1605
153 Ga0268266_10000221 3300028379 Bacteria 99332
154 Ga0268266_10176851 3300028379 Bacteria 1941
155 Ga0268265_10041810 3300028380 Bacteria 3396
156 Ga0268264_10351309 3300028381 Bacteria 1403
157 Ga0307406_10208457 3300031901 Bacteria 1444
158 Ga0307409_100113910 3300031995 Bacteria 2274
159 Ga0373954_0021039 3300035118 Bacteria 2953
160 Ga0373955_0025590 3300035172 Bacteria 3033
161 Ga0373961_0044248 3300035241 Bacteria 1298
162 Ga0373937_0455673 3300036401 Bacteria 1215
163 Ga0436365_1367441 3300039437 Bacteria 8113
164 Ga0451835_0154583 3300041492 Bacteria 9541
165 Ga0451839_1329932 3300041496 Bacteria 1719
166 Ga0451851_0111376 3300041507 Bacteria 8204
167 Ga0451853_1409747 3300041512 Bacteria 4076
168 Ga0439454_010505 3300042011 Bacteria 1221
169 Ga0439458_0013960 3300042157 Bacteria 1811
170 Ga0466957_0076536 3300044842 Bacteria 2078
171 Ga0495629_0055008 3300046459 Bacteria 2783
172 Ga0495638_0002804 3300046460 Bacteria 13963
173 Ga0495638_0007956 3300046460 Bacteria 7562
174 Ga0495605_0016610 3300046474 Bacteria 3982
175 Ga0495662_0041423 3300046476 Bacteria 2223
176 Ga0495585_0020331 3300046492 Bacteria 3819
177 Ga0495607_0050062 3300046501 Bacteria 2434
178 Ga0495632_0005220 3300046519 Bacteria 8657
179 Ga0495643_0095013 3300046522 Bacteria 1534
180 Ga0495640_0174584 3300046533 Bacteria 1372
181 Ga0495609_0076941 3300046538 Bacteria 1462
182 Ga0495622_0114055 3300046557 Bacteria 1236
183 Ga0495633_0063349 3300046558 Bacteria 1730
184 Ga0495656_0120896 3300046615 Bacteria 1236
185 Ga0495668_0009665 3300046616 Bacteria 5898
186 Ga0495611_0101884 3300046648 Bacteria 1334
187 Ga0495625_0011521 3300046660 Bacteria 7203
188 Ga0495635_0078307 3300046663 Bacteria 2263
189 Ga0495659_0091552 3300046664 Bacteria 1168
190 Ga0495657_0058596 3300046675 Bacteria 2557
191 Ga0495657_0059812 3300046675 Bacteria 2526
192 Ga0495623_0054096 3300046679 Bacteria 2533
193 Ga0495670_0035822 3300046691 Bacteria 2472
194 Ga0495589_0047020 3300046794 Bacteria 2139
195 Ga0495660_0007229 3300046810 Bacteria 6536
196 Ga0495604_0021272 3300047317 Bacteria 5178
197 Ga0495681_0066248 3300047470 Bacteria 1649
198 Ga0495602_0122577 3300048088 Bacteria 2089
199 Ga0496106_0000746 3300048909 Bacteria 23470
200 Ga0496109_0068187 3300048912 Bacteria 3261
201 Ga0496109_0116186 3300048912 Bacteria 2490
202 Ga0496110_0125359 3300048913 Bacteria 2317
203 Ga0496112_0008292 3300048915 Bacteria 9298
204 Ga0496112_0064769 3300048915 Bacteria 3607
205 Ga0496116_0122969 3300048919 Bacteria 1497
206 Ga0496118_0019669 3300048921 Bacteria 6026
207 Ga0496122_0033892 3300048925 Bacteria 4191
208 Ga0496122_0045552 3300048925 Bacteria 3408
209 Ga0496123_0006170 3300048926 Bacteria 11723
210 Ga0496124_0010326 3300048927 Bacteria 9472
211 Ga0496124_0099432 3300048927 Bacteria 2359
212 Ga0496125_0007147 3300048928 Bacteria 11918
213 Ga0495678_054200 3300049459 Bacteria 1536
214 Ga0501039_0090966 3300049575 Bacteria 2378
215 Ga0501040_0069924 3300049576 Bacteria 2422
216 Ga0501041_0147490 3300049577 Bacteria 1468
217 Ga0501075_0081349 3300049591 Bacteria 2452
218 Ga0501076_0023876 3300049592 Bacteria 4718
219 Ga0501077_0015174 3300049593 Bacteria 4845
220 Ga0501081_0044221 3300049743 Bacteria 3057
221 nmdc:mga05p37_11_c1 3300050507 Bacteria 149577
222 nmdc:mga05p37_516085_c1 3300050507 Bacteria 1368
223 nmdc:mga08y16_23722_c1 3300050511 Bacteria 6477
224 Ga0495601_0080579 3300053077 Bacteria 2089
225 Ga0500610_0026686 3300053079 Bacteria 2893
226 Ga0500643_007699 3300053087 Bacteria 4309
227 Ga0500643_014062 3300053087 Bacteria 2798
228 Ga0500644_0002300 3300053088 Bacteria 4813
229 Ga0500557_001410 3300053105 Bacteria 3897
230 Ga0500658_0000363 3300053134 Bacteria 20007
231 Ga0500658_0007699 3300053134 Bacteria 3977
232 Ga0500568_0000738 3300053139 Bacteria 23375
233 Ga0500590_000378 3300053148 Bacteria 14791
234 Ga0500590_001751 3300053148 Bacteria 9140
235 Ga0500616_0003400 3300053153 Bacteria 12210
236 Ga0500622_0000116 3300053156 Bacteria 82811
237 Ga0500622_0000533 3300053156 Bacteria 35317
238 Ga0500636_0061428 3300053177 Bacteria 2193
239 Ga0501084_0024501 3300054114 Bacteria 5035
240 Ga0501084_0427015 3300054114 Bacteria 1120
241 Ga0530510_0011611 3300061734 Bacteria 6181
242 2513996952 2513237159 Bacteria 6810126
243 2585397220 2582581866 Bacteria 6859583
244 2644735622 2643221734 Bacteria 5365412
245 2644744068 2643221736 Bacteria 6608466
246 2841916633 2841911363 Bacteria 6173697
247 2841922530 2841917233 Bacteria 6173500
248 2842522808 2842521101 Bacteria 6569494
249 2851184682 2851182111 Bacteria 6047226
250 2887483105 2887478801 Bacteria 8972725
251 2917702830 2917699015 Bacteria 7043791
252 2919103313 2919100787 Bacteria 7710546
253 2941481753
254 8005558758 8005556819 Bacteria 6908598
255 8018164112 8018163183 Bacteria 7277977
256 8024492494 8024486573 Bacteria 6540512
257 8045869125 8045864390 Bacteria 5043873
258 Ga0068859_100057584
259 JGI25159J45721_1000096
260 JGI25159J45721_1000150
261 JGI25406J46586_10026587
262 JGI25153J46596_10000249
263 JGI25153J46596_10001599
264 JGI25160J50197_1000070
265 JGI25161J50226_1000026
266 Ga0055526_1000399
267 Ga0055524_1003933
268 Ga0055528_1011785
269 Ga0055540_1000581
270 Ga0055543_1000042
271 Ga0058863_11504797
272 Ga0058861_11553195
273 Ga0058862_12878892
274 Ga0065165_1000512
275 Ga0070658_10003661
276 Ga0070683_100014280
277 Ga0070683_100020797
278 Ga0070683_100178619
279 Ga0070683_100196253
280 Ga0070690_100045867
281 Ga0070670_100034883
282 Ga0068869_100046981
283 Ga0068869_100128727
284 Ga0070666_10190764
285 Ga0070680_100011039
286 Ga0070660_100052264
287 Ga0070689_100137197
288 Ga0070687_100019178
289 Ga0070661_100272746
290 Ga0070668_100151904
291 Ga0070675_100005086
292 Ga0070675_100024825
293 Ga0070674_100052990
294 Ga0070673_100274448
295 Ga0070688_100089625
296 Ga0070659_100084666
297 Ga0070667_100001643
298 Ga0070667_100043429
299 Ga0070667_100078017
300 Ga0070667_100078309
301 Ga0070662_100175725
302 Ga0070681_10004885
303 Ga0068867_100050119
304 Ga0068867_100262310
305 Ga0070679_100001163
306 Ga0070679_100083665
307 Ga0070684_100000814
308 Ga0070684_100106612
309 Ga0070684_100252856
310 Ga0070672_100018213
311 Ga0070665_100001353
312 Ga0070665_100051983
313 Ga0070665_100131034
314 Ga0070664_100020012
315 Ga0070664_100045143
316 Ga0070664_100194719
317 Ga0068857_100006825
318 Ga0068857_100147841
319 Ga0068854_100176965
320 Ga0070702_100182639
321 Ga0068859_100128957
322 Ga0068870_10094700
323 Ga0068860_100118257
324 Ga0068860_100165054
325 Ga0081539_10003223
326 Ga0075369_10059538
327 Ga0075428_100115100
328 Ga0075430_100008239
329 Ga0075431_100003652
330 Ga0075431_100017756
331 Ga0075429_100009896
332 Ga0068865_100060789
333 Ga0097620_100057588
334 Ga0097620_100128959
335 Ga0111539_10005081
336 Ga0111539_10049736
337 Ga0114129_10000054
338 Ga0114129_10095396
339 Ga0114129_10780526
340 Ga0105243_10017124
341 Ga0105243_10104369
342 Ga0105242_10018590
343 Ga0105242_10205341
344 Ga0105248_10037370
345 Ga0105248_10114075
346 Ga0105248_10219179
347 Ga0105249_10143237
348 Ga0105249_10552602
349 Ga0157371_10101197
350 Ga0157369_10362442
351 Ga0171462_1013
352 Ga0163162_10063243
353 Ga0157372_10035589
354 Ga0157375_10009966
355 Ga0157375_10035172
356 Ga0163163_10089770
357 Ga0207425_1000558
358 Ga0207425_1002224
359 Ga0209129_1000092
360 Ga0209673_1000987
361 Ga0209130_1000073
362 Ga0209025_1019429
363 Ga0209564_1000168
364 Ga0209758_1000201
365 Ga0209256_1000102
366 Ga0209256_1002173
367 Ga0207426_1000140
368 Ga0209051_1001138
369 Ga0209257_1011055
370 Ga0207642_10085191
371 Ga0207680_10219068
372 Ga0207645_10163079
373 Ga0207643_10021652
374 Ga0207705_10009222
375 Ga0207707_10004525
376 Ga0207660_10011643
377 Ga0207662_10057172
378 Ga0207657_10062476
379 Ga0207649_10028008
380 Ga0207652_10005811
381 Ga0207681_10011611
382 Ga0207659_10047291
383 Ga0207659_10088822
384 Ga0207644_10055012
385 Ga0207706_10179564
386 Ga0207669_10007172
387 Ga0207669_10105910
388 Ga0207704_10006347
389 Ga0207691_10030857
390 Ga0207691_10076045
391 Ga0207689_10066957
392 Ga0207689_10153024
393 Ga0207661_10018245
394 Ga0207661_10049642
395 Ga0207679_10041774
396 Ga0207679_10104173
397 Ga0207712_10157797
398 Ga0207712_10314715
399 Ga0207668_10000003
400 Ga0207640_10187319
401 Ga0207658_10004355
402 Ga0207658_10076127
403 Ga0207708_10177745
404 Ga0207648_10074128
405 Ga0207648_10303097
406 Ga0207676_10027748
407 Ga0207674_10004876
408 Ga0207674_10184343
409 Ga0207675_100285389
410 Ga0268266_10000221
411 Ga0268266_10176851
412 Ga0268265_10041810
413 Ga0268264_10351309
414 Ga0307406_10208457
415 Ga0307409_100113910
416 Ga0373954_0021039
417 Ga0373955_0025590
418 Ga0373961_0044248
419 Ga0373937_0455673
420 Ga0436365_1367441
421 Ga0451835_0154583
422 Ga0451839_1329932
423 Ga0451851_0111376
424 Ga0451853_1409747
425 Ga0439454_010505
426 Ga0439458_0013960
427 Ga0466957_0076536
428 Ga0495629_0055008
429 Ga0495638_0002804
430 Ga0495638_0007956
431 Ga0495605_0016610
432 Ga0495662_0041423
433 Ga0495585_0020331
434 Ga0495607_0050062
435 Ga0495632_0005220
436 Ga0495643_0095013
437 Ga0495640_0174584
438 Ga0495609_0076941
439 Ga0495622_0114055
440 Ga0495633_0063349
441 Ga0495656_0120896
442 Ga0495668_0009665
443 Ga0495611_0101884
444 Ga0495625_0011521
445 Ga0495635_0078307
446 Ga0495659_0091552
447 Ga0495657_0058596
448 Ga0495657_0059812
449 Ga0495623_0054096
450 Ga0495670_0035822
451 Ga0495589_0047020
452 Ga0495660_0007229
453 Ga0495604_0021272
454 Ga0495681_0066248
455 Ga0495602_0122577
456 Ga0496106_0000746
457 Ga0496109_0068187
458 Ga0496109_0116186
459 Ga0496110_0125359
460 Ga0496112_0008292
461 Ga0496112_0064769
462 Ga0496116_0122969
463 Ga0496118_0019669
464 Ga0496122_0033892
465 Ga0496122_0045552
466 Ga0496123_0006170
467 Ga0496124_0010326
468 Ga0496124_0099432
469 Ga0496125_0007147
470 Ga0495678_054200
471 Ga0501039_0090966
472 Ga0501040_0069924
473 Ga0501041_0147490
474 Ga0501075_0081349
475 Ga0501076_0023876
476 Ga0501077_0015174
477 Ga0501081_0044221
478 nmdc:mga05p37_11_c1
479 nmdc:mga05p37_516085_c1
480 nmdc:mga08y16_23722_c1
481 Ga0495601_0080579
482 Ga0500610_0026686
483 Ga0500643_007699
484 Ga0500643_014062
485 Ga0500644_0002300
486 Ga0500557_001410
487 Ga0500658_0000363
488 Ga0500658_0007699
489 Ga0500568_0000738
490 Ga0500590_000378
491 Ga0500590_001751
492 Ga0500616_0003400
493 Ga0500622_0000116
494 Ga0500622_0000533
495 Ga0500636_0061428
496 Ga0501084_0024501
497 Ga0501084_0427015
498 Ga0530510_0011611
499 2513996952
500 2585397220
501 2644735622
502 2644744068
503 2841916633
504 2841922530
505 2842522808
506 2851184682
507 2887483105
508 2917702830
509 2919103313
510 2941481753
511 8005558758
512 8018164112
513 8024492494
514 8045869125

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03781

FGE-sulfatase

Sulfatase-modifying factor enzyme 1

49

354

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1y1f-assembly1.cif.gz_X human formylglycine generating enzyme with cysteine sulfenic acid 0.916 13 320
2hib-assembly1.cif.gz_X human formylglycine generating enzyme, c336s mutant, iodide co-crystallization 0.9129 15 320
2aii-assembly1.cif.gz_X wild-type formylglycine generating enzyme reacted with iodoacetamide 0.9124 13 320
2afy-assembly1.cif.gz_X formylglycine generating enzyme c341s mutant 0.91 13 320
1y1f-assembly1.cif.gz_X human formylglycine generating enzyme with cysteine sulfenic acid 0.9094 13 320
ID Description Score Start End Superfamily
af_I6Y8I5_2_297_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.9098 17 320 3.90.1580.10
af_I6Y8I5_2_297_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.9008 17 320 3.90.1580.10
af_A0A2R8Q5G7_74_369_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.8569 4 319 3.90.1580.10
af_A0A2R8Q5G7_74_369_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.8456 4 319 3.90.1580.10
af_Q8NBJ7_27_294_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.812 17 319 3.90.1580.10
ID Description Score Start End GO Terms
AF-A0A256FK39-F1-model_v4 Formylglycine-generating sulfatase enzyme family protein 0.9841 19 319 GO:0120147
AF-A0A1G9R1I8-F1-model_v4 Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain 0.9823 17 319 GO:0120147
AF-A0A1W6ZQ04-F1-model_v4 Gliding motility-associated lipoprotein GldK 0.9822 19 319 GO:0120147
AF-A0A7Y8R1M7-F1-model_v4 deleted 0.9821 19 322
AF-I4YN29-F1-model_v4 Sulfatase-modifying factor enzyme domain-containing protein 0.9811 19 319 GO:0120147

Map