F367256

General Info

Members Datasets Scaffolds Average Seq Length
257 124 514 394

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10159089|Ga0111539_101590892
Length 444
Sequence MFGWLRGAWEAPMSFRGASEAREPGIHNHDSGLWIPALASLGRNDDELAGFFMRNILKTFFRPVETKSSRVAQLIQLESGTRARWTPRDYAALSREGYVANAIVHRAIRLVAENVAAAPYLVYEGDAVRDTHPLLSLLARPNPRQERSAFLESVCAHLLLAGNAYVEAVTLRRERPEVRELYALRPDRMRVVPGPDGWPRSYEYTVAGRTLRFDQSAAPPPILHLTQFHPLDDHYGLSAIEPAAVAIDVHNASARWNKALLDNAARPCGALVYAAGAGTALTDNQLERLKRELEDQFQGARNAGRPLVLEGGLDWKAMSLTPRDMDFLEAKHTAAREIALAFGVPPMLLGIPGDNTYSNYQEANRVFFRGTVLPLASRIGQALAQWLAPAFGELRLDIDTDQIPALAADRAALWDQVTRAPFLTVNEKRQMTGFAPLEGGDRIA

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
11 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
12 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
18 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
19 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
25 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
26 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
27 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
28 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
29 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
30 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
31 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
32 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
33 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
36 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
37 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
38 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
41 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
42 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
43 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
44 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
45 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
46 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
47 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
48 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
49 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
50 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
51 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
52 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
53 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
54 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
55 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
56 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
72 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
73 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
74 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
75 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
76 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
77 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
78 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
79 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
80 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
83 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
87 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
97 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
98 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
99 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
100 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
101 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
102 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
103 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
104 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
105 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
106 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
107 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
108 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
109 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
110 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
111 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
114 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
115 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
116 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
117 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
118 2738543024 Aminobacter sp. AP02 Isolate Unclassified
119 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
120 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
121 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
122 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
123 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
124 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.72
Metatranscriptomes 0
Isolates 4.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.56
Nodule 0.39
Rhizoplane 1.56
Rhizosphere 82.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10159089 3300009094 Bacteria 2642
2 JGI25406J46586_10008328 3300003203 Bacteria 4703
3 Ga0070680_100204579 3300005336 Bacteria 1665
4 Ga0070659_100243549 3300005366 Bacteria 1489
5 Ga0070662_100036774 3300005457 Bacteria 3467
6 Ga0070679_100310481 3300005530 Bacteria 1527
7 Ga0068864_100054761 3300005618 Bacteria 3443
8 Ga0081455_10006214 3300005937 Bacteria 12870
9 Ga0081539_10002103 3300005985 Bacteria 29650
10 Ga0075368_10014388 3300006042 Bacteria 2921
11 Ga0075366_10012179 3300006195 Bacteria 4874
12 Ga0075430_100048624 3300006846 Bacteria 3581
13 Ga0075430_100216080 3300006846 Bacteria 1591
14 Ga0075431_100003952 3300006847 Bacteria 14441
15 Ga0075434_100004789 3300006871 Bacteria 12258
16 Ga0075429_100002143 3300006880 Bacteria 16462
17 Ga0114129_10262832 3300009147 Bacteria 2312
18 Ga0157370_10060133 3300013104 Bacteria 3608
19 Ga0209564_1001227 3300025295 Bacteria 28939
20 Ga0207652_10289161 3300025921 Bacteria 1479
21 Ga0207706_10021278 3300025933 Bacteria 5826
22 Ga0207711_10251526 3300025941 Bacteria 1623
23 Ga0207678_10330514 3300026067 Bacteria 1312
24 Ga0207674_10398813 3300026116 Bacteria 1329
25 Ga0207428_10000115 3300027907 Bacteria 109072
26 Ga0265318_10067877 3300028577 Bacteria 1323
27 Ga0265330_10066163 3300031235 Bacteria 1568
28 Ga0265325_10000106 3300031241 Bacteria 59197
29 Ga0265325_10003817 3300031241 Bacteria 9704
30 Ga0265325_10036819 3300031241 Bacteria 2590
31 Ga0265325_10053170 3300031241 Bacteria 2077
32 Ga0265325_10067532 3300031241 Bacteria 1801
33 Ga0265340_10029415 3300031247 Bacteria 2759
34 Ga0307513_10003751 3300031456 Bacteria 20507
35 Ga0265313_10034630 3300031595 Bacteria 2551
36 Ga0265313_10081949 3300031595 Bacteria 1463
37 Ga0265342_10062228 3300031712 Bacteria 2197
38 Ga0316576_10114385 3300031727 Bacteria 2024
39 Ga0373939_0004095 3300035114 Bacteria 3434
40 Ga0316574_0000627 3300035398 Bacteria 14764
41 Ga0373931_0136590 3300035691 Bacteria 1416
42 Ga0316584_0014026 3300036712 Bacteria 5691
43 Ga0395899_0000090 3300037312 Bacteria 156587
44 Ga0395900_0000017 3300037418 Bacteria 369602
45 Ga0395898_0000030 3300037466 Bacteria 369577
46 Ga0395905_0000081 3300037471 Bacteria 160409
47 Ga0395901_0000015 3300038443 Bacteria 373388
48 Ga0495638_0047167 3300046460 Bacteria 2702
49 Ga0495637_0055728 3300046520 Bacteria 1639
50 Ga0495686_0036469 3300047472 Bacteria 3155
51 Ga0495626_0020846 3300048091 Bacteria 3261
52 Ga0496106_0023417 3300048909 Bacteria 4588
53 Ga0496109_0033044 3300048912 Bacteria 4654
54 Ga0496112_0138687 3300048915 Bacteria 2402
55 Ga0496113_0230580 3300048916 Bacteria 1476
56 Ga0496116_0019074 3300048919 Bacteria 5264
57 Ga0496117_0066919 3300048920 Bacteria 2434
58 Ga0496118_0007644 3300048921 Bacteria 11380
59 Ga0496122_0019751 3300048925 Bacteria 6139
60 Ga0496122_0051132 3300048925 Bacteria 3144
61 Ga0496125_0000040 3300048928 Bacteria 314478
62 Ga0496125_0001136 3300048928 Bacteria 40509
63 Ga0496126_0031017 3300048929 Bacteria 5056
64 Ga0496126_0047174 3300048929 Bacteria 3944
65 Ga0501031_0000001 3300049568 Bacteria 219461
66 Ga0501031_0000275 3300049568 Bacteria 29050
67 Ga0501031_0008196 3300049568 Bacteria 6800
68 Ga0501031_0019688 3300049568 Bacteria 4397
69 Ga0501032_0000003 3300049569 Bacteria 317700
70 Ga0501032_0000038 3300049569 Bacteria 115810
71 Ga0501032_0000082 3300049569 Bacteria 82284
72 Ga0501032_0012919 3300049569 Bacteria 5951
73 Ga0501032_0013940 3300049569 Bacteria 5702
74 Ga0501032_0046715 3300049569 Bacteria 2925
75 Ga0501032_0093544 3300049569 Bacteria 1993
76 Ga0501033_0000070 3300049570 Bacteria 97795
77 Ga0501033_0000089 3300049570 Bacteria 86782
78 Ga0501033_0000228 3300049570 Bacteria 54176
79 Ga0501033_0011642 3300049570 Bacteria 6726
80 Ga0501033_0074578 3300049570 Bacteria 2490
81 Ga0501033_0081741 3300049570 Bacteria 2369
82 Ga0501033_0102037 3300049570 Bacteria 2092
83 Ga0501034_0000005 3300049571 Bacteria 367512
84 Ga0501034_0000087 3300049571 Bacteria 166714
85 Ga0501034_0000228 3300049571 Bacteria 106111
86 Ga0501034_0001325 3300049571 Bacteria 33444
87 Ga0501034_0003097 3300049571 Bacteria 19167
88 Ga0501034_0007205 3300049571 Bacteria 11870
89 Ga0501034_0042252 3300049571 Bacteria 4614
90 Ga0501034_0088676 3300049571 Bacteria 3091
91 Ga0501034_0089807 3300049571 Bacteria 3070
92 Ga0501034_0136449 3300049571 Bacteria 2434
93 Ga0501034_0354299 3300049571 Bacteria 1395
94 Ga0501036_0000010 3300049572 Bacteria 163304
95 Ga0501036_0000018 3300049572 Bacteria 121185
96 Ga0501036_0000256 3300049572 Bacteria 36120
97 Ga0501036_0011410 3300049572 Bacteria 7354
98 Ga0501036_0019100 3300049572 Bacteria 5751
99 Ga0501036_0060839 3300049572 Bacteria 3198
100 Ga0501036_0081513 3300049572 Bacteria 2734
101 Ga0501036_0113073 3300049572 Bacteria 2294
102 Ga0501037_0000005 3300049573 Bacteria 219461
103 Ga0501037_0000014 3300049573 Bacteria 171015
104 Ga0501037_0000135 3300049573 Bacteria 68925
105 Ga0501037_0000988 3300049573 Bacteria 21083
106 Ga0501037_0049044 3300049573 Bacteria 3092
107 Ga0501037_0069082 3300049573 Bacteria 2572
108 Ga0501037_0103495 3300049573 Bacteria 2053
109 Ga0501038_0000001 3300049574 Bacteria 375481
110 Ga0501038_0000023 3300049574 Bacteria 151469
111 Ga0501038_0000079 3300049574 Bacteria 81639
112 Ga0501038_0007584 3300049574 Bacteria 10005
113 Ga0501038_0133973 3300049574 Bacteria 2031
114 Ga0501038_0150790 3300049574 Bacteria 1895
115 Ga0501039_0000015 3300049575 Bacteria 219470
116 Ga0501039_0000044 3300049575 Bacteria 108828
117 Ga0501039_0000527 3300049575 Bacteria 27669
118 Ga0501039_0002586 3300049575 Bacteria 13526
119 Ga0501039_0006782 3300049575 Bacteria 8709
120 Ga0501039_0068429 3300049575 Bacteria 2757
121 Ga0501039_0184130 3300049575 Bacteria 1642
122 Ga0501040_0000608 3300049576 Bacteria 21893
123 Ga0501040_0017690 3300049576 Bacteria 4731
124 Ga0501041_0056718 3300049577 Bacteria 2394
125 Ga0501041_0199011 3300049577 Bacteria 1256
126 Ga0501042_0004892 3300049578 Bacteria 8575
127 Ga0501043_0000021 3300049579 Bacteria 155025
128 Ga0501043_0000088 3300049579 Bacteria 82282
129 Ga0501043_0010469 3300049579 Bacteria 7264
130 Ga0501043_0010677 3300049579 Bacteria 7194
131 Ga0501043_0077722 3300049579 Bacteria 2607
132 Ga0501043_0128314 3300049579 Bacteria 1988
133 Ga0501046_0000341 3300049580 Bacteria 47097
134 Ga0501046_0001731 3300049580 Bacteria 20832
135 Ga0501046_0074358 3300049580 Bacteria 2636
136 Ga0501047_0000041 3300049581 Bacteria 184355
137 Ga0501047_0000412 3300049581 Bacteria 47833
138 Ga0501047_0004088 3300049581 Bacteria 13730
139 Ga0501047_0056339 3300049581 Bacteria 3800
140 Ga0501047_0057349 3300049581 Bacteria 3766
141 Ga0501047_0149425 3300049581 Bacteria 2213
142 Ga0501047_0154965 3300049581 Bacteria 2165
143 Ga0501047_0348986 3300049581 Bacteria 1317
144 Ga0501048_0000022 3300049582 Bacteria 68365
145 Ga0501048_0027484 3300049582 Bacteria 4133
146 Ga0501067_0000541 3300049583 Bacteria 20513
147 Ga0501067_0006253 3300049583 Bacteria 6605
148 Ga0501067_0006918 3300049583 Bacteria 6294
149 Ga0501068_0000285 3300049584 Bacteria 25201
150 Ga0501068_0020848 3300049584 Bacteria 3824
151 Ga0501068_0102857 3300049584 Bacteria 1771
152 Ga0501069_0064739 3300049585 Bacteria 2043
153 Ga0501070_0000986 3300049586 Bacteria 25571
154 Ga0501070_0007138 3300049586 Bacteria 9489
155 Ga0501070_0056308 3300049586 Bacteria 3259
156 Ga0501070_0072982 3300049586 Bacteria 2840
157 Ga0501070_0076813 3300049586 Bacteria 2764
158 Ga0501070_0117326 3300049586 Bacteria 2198
159 Ga0501070_0182373 3300049586 Bacteria 1727
160 Ga0501070_0219000 3300049586 Bacteria 1561
161 Ga0501071_0001855 3300049587 Bacteria 12528
162 Ga0501071_0183018 3300049587 Bacteria 1570
163 Ga0501071_0197554 3300049587 Bacteria 1510
164 Ga0501072_0024316 3300049588 Bacteria 4711
165 Ga0501072_0065044 3300049588 Bacteria 2875
166 Ga0501072_0099443 3300049588 Bacteria 2312
167 Ga0501072_0102237 3300049588 Bacteria 2278
168 Ga0501072_0262246 3300049588 Bacteria 1375
169 Ga0501072_0297721 3300049588 Bacteria 1282
170 Ga0501073_0000082 3300049589 Bacteria 59745
171 Ga0501073_0025203 3300049589 Bacteria 4268
172 Ga0501073_0046729 3300049589 Bacteria 3043
173 Ga0501073_0131607 3300049589 Bacteria 1734
174 Ga0501074_0000325 3300049590 Bacteria 27683
175 Ga0501074_0025390 3300049590 Bacteria 4303
176 Ga0501074_0031897 3300049590 Bacteria 3818
177 Ga0501074_0034135 3300049590 Bacteria 3688
178 Ga0501074_0060211 3300049590 Bacteria 2735
179 Ga0501077_0047694 3300049593 Bacteria 2722
180 Ga0501079_0002217 3300049741 Bacteria 14010
181 Ga0501079_0034659 3300049741 Bacteria 3884
182 Ga0501080_0000138 3300049742 Bacteria 50982
183 Ga0501080_0000905 3300049742 Bacteria 24287
184 Ga0501080_0008422 3300049742 Bacteria 9340
185 Ga0501080_0020312 3300049742 Bacteria 6146
186 Ga0501080_0078805 3300049742 Bacteria 3063
187 Ga0501080_0187704 3300049742 Bacteria 1900
188 Ga0501081_0180883 3300049743 Bacteria 1525
189 Ga0501083_0000166 3300049744 Bacteria 43156
190 Ga0501083_0007344 3300049744 Bacteria 7817
191 Ga0501083_0046291 3300049744 Bacteria 2941
192 Ga0501035_0000047 3300049822 Bacteria 146497
193 Ga0501035_0000053 3300049822 Bacteria 142860
194 Ga0501035_0000146 3300049822 Bacteria 86011
195 Ga0501035_0011119 3300049822 Bacteria 8335
196 Ga0501035_0017735 3300049822 Bacteria 6565
197 Ga0501035_0035110 3300049822 Bacteria 4552
198 Ga0501035_0065933 3300049822 Bacteria 3213
199 Ga0501035_0103807 3300049822 Bacteria 2493
200 Ga0501035_0156720 3300049822 Bacteria 1973
201 Ga0501044_0000001 3300049823 Bacteria 418087
202 Ga0501044_0000054 3300049823 Bacteria 141399
203 Ga0501044_0000361 3300049823 Bacteria 56979
204 Ga0501044_0001585 3300049823 Bacteria 26648
205 Ga0501044_0001876 3300049823 Bacteria 24349
206 Ga0501044_0012163 3300049823 Bacteria 9319
207 Ga0501044_0036466 3300049823 Bacteria 5145
208 Ga0501044_0063811 3300049823 Bacteria 3761
209 Ga0501044_0074722 3300049823 Bacteria 3442
210 Ga0501044_0218298 3300049823 Bacteria 1858
211 Ga0501044_0252633 3300049823 Bacteria 1703
212 nmdc:mga03n38_12691_c1 3300050490 Bacteria 3179
213 nmdc:mga0yw44_54531_c1 3300050492 Bacteria 2430
214 nmdc:mga0k408_100437_c1 3300050493 Bacteria 1706
215 nmdc:mga06z11_156076_c1 3300050494 Bacteria 1301
216 nmdc:mga05p37_1056_c1 3300050507 Bacteria 31456
217 nmdc:mga09592_23355_c1 3300050508 Bacteria 5108
218 nmdc:mga0qj67_1466_c1 3300050509 Bacteria 16540
219 nmdc:mga0qj67_199816_c1 3300050509 Bacteria 1624
220 nmdc:mga06r32_149761_c1 3300050510 Bacteria 2312
221 nmdc:mga08y16_137241_c1 3300050511 Bacteria 2542
222 nmdc:mga08y16_9322_c1 3300050511 Bacteria 10295
223 nmdc:mga0n895_2352_c1 3300050512 Bacteria 14737
224 nmdc:mga0a205_108_c1 3300050515 Bacteria 47940
225 Ga0500646_0005161 3300053090 Bacteria 3305
226 Ga0500651_0003683 3300053093 Bacteria 8437
227 Ga0500566_0002784 3300053094 Bacteria 10423
228 Ga0500641_0029525 3300053096 Bacteria 2149
229 Ga0500594_0010317 3300053118 Bacteria 2167
230 Ga0500595_000002 3300053119 Bacteria 1074388
231 Ga0500652_000062 3300053131 Bacteria 47514
232 Ga0500559_0000275 3300053136 Bacteria 39820
233 Ga0500568_0000190 3300053139 Bacteria 53492
234 Ga0500577_0000025 3300053142 Bacteria 38251
235 Ga0500604_0001541 3300053151 Bacteria 6444
236 Ga0500636_0023702 3300053177 Bacteria 3627
237 Ga0500636_0041978 3300053177 Bacteria 2705
238 Ga0500645_000012 3300053730 Bacteria 168579
239 Ga0500596_007001 3300053735 Bacteria 1870
240 Ga0501084_0101169 3300054114 Bacteria 2420
241 Ga0501084_0129866 3300054114 Bacteria 2121
242 Ga0501082_0000193 3300060353 Bacteria 52651
243 Ga0501082_0008034 3300060353 Bacteria 9108
244 Ga0501082_0018759 3300060353 Bacteria 5960
245 Ga0501082_0048825 3300060353 Bacteria 3648
246 Ga0530510_0081800 3300061734 Bacteria 2352
247 2643774812 2643221551 Bacteria 3750538
248 2643793256 2643221555 Bacteria 3749717
249 2643838647 2643221564 Bacteria 4193379
250 2644132763 2643221623 Bacteria 5239945
251 2739306611 2738543024 Bacteria 5603683
252 2757570658 2757320392 Bacteria 3737298
253 2857528402 2857524615 Bacteria 6615449
254 2889794978 2889790730 Bacteria 5689708
255 2889920095 2889914905 Bacteria 5702301
256 2919075859 2919073203 Bacteria 6531949
257 2996313174 2996310559 Bacteria 6357320
258 Ga0111539_10159089
259 JGI25406J46586_10008328
260 Ga0070680_100204579
261 Ga0070659_100243549
262 Ga0070662_100036774
263 Ga0070679_100310481
264 Ga0068864_100054761
265 Ga0081455_10006214
266 Ga0081539_10002103
267 Ga0075368_10014388
268 Ga0075366_10012179
269 Ga0075430_100048624
270 Ga0075430_100216080
271 Ga0075431_100003952
272 Ga0075434_100004789
273 Ga0075429_100002143
274 Ga0114129_10262832
275 Ga0157370_10060133
276 Ga0209564_1001227
277 Ga0207652_10289161
278 Ga0207706_10021278
279 Ga0207711_10251526
280 Ga0207678_10330514
281 Ga0207674_10398813
282 Ga0207428_10000115
283 Ga0265318_10067877
284 Ga0265330_10066163
285 Ga0265325_10000106
286 Ga0265325_10003817
287 Ga0265325_10036819
288 Ga0265325_10053170
289 Ga0265325_10067532
290 Ga0265340_10029415
291 Ga0307513_10003751
292 Ga0265313_10034630
293 Ga0265313_10081949
294 Ga0265342_10062228
295 Ga0316576_10114385
296 Ga0373939_0004095
297 Ga0316574_0000627
298 Ga0373931_0136590
299 Ga0316584_0014026
300 Ga0395899_0000090
301 Ga0395900_0000017
302 Ga0395898_0000030
303 Ga0395905_0000081
304 Ga0395901_0000015
305 Ga0495638_0047167
306 Ga0495637_0055728
307 Ga0495686_0036469
308 Ga0495626_0020846
309 Ga0496106_0023417
310 Ga0496109_0033044
311 Ga0496112_0138687
312 Ga0496113_0230580
313 Ga0496116_0019074
314 Ga0496117_0066919
315 Ga0496118_0007644
316 Ga0496122_0019751
317 Ga0496122_0051132
318 Ga0496125_0000040
319 Ga0496125_0001136
320 Ga0496126_0031017
321 Ga0496126_0047174
322 Ga0501031_0000001
323 Ga0501031_0000275
324 Ga0501031_0008196
325 Ga0501031_0019688
326 Ga0501032_0000003
327 Ga0501032_0000038
328 Ga0501032_0000082
329 Ga0501032_0012919
330 Ga0501032_0013940
331 Ga0501032_0046715
332 Ga0501032_0093544
333 Ga0501033_0000070
334 Ga0501033_0000089
335 Ga0501033_0000228
336 Ga0501033_0011642
337 Ga0501033_0074578
338 Ga0501033_0081741
339 Ga0501033_0102037
340 Ga0501034_0000005
341 Ga0501034_0000087
342 Ga0501034_0000228
343 Ga0501034_0001325
344 Ga0501034_0003097
345 Ga0501034_0007205
346 Ga0501034_0042252
347 Ga0501034_0088676
348 Ga0501034_0089807
349 Ga0501034_0136449
350 Ga0501034_0354299
351 Ga0501036_0000010
352 Ga0501036_0000018
353 Ga0501036_0000256
354 Ga0501036_0011410
355 Ga0501036_0019100
356 Ga0501036_0060839
357 Ga0501036_0081513
358 Ga0501036_0113073
359 Ga0501037_0000005
360 Ga0501037_0000014
361 Ga0501037_0000135
362 Ga0501037_0000988
363 Ga0501037_0049044
364 Ga0501037_0069082
365 Ga0501037_0103495
366 Ga0501038_0000001
367 Ga0501038_0000023
368 Ga0501038_0000079
369 Ga0501038_0007584
370 Ga0501038_0133973
371 Ga0501038_0150790
372 Ga0501039_0000015
373 Ga0501039_0000044
374 Ga0501039_0000527
375 Ga0501039_0002586
376 Ga0501039_0006782
377 Ga0501039_0068429
378 Ga0501039_0184130
379 Ga0501040_0000608
380 Ga0501040_0017690
381 Ga0501041_0056718
382 Ga0501041_0199011
383 Ga0501042_0004892
384 Ga0501043_0000021
385 Ga0501043_0000088
386 Ga0501043_0010469
387 Ga0501043_0010677
388 Ga0501043_0077722
389 Ga0501043_0128314
390 Ga0501046_0000341
391 Ga0501046_0001731
392 Ga0501046_0074358
393 Ga0501047_0000041
394 Ga0501047_0000412
395 Ga0501047_0004088
396 Ga0501047_0056339
397 Ga0501047_0057349
398 Ga0501047_0149425
399 Ga0501047_0154965
400 Ga0501047_0348986
401 Ga0501048_0000022
402 Ga0501048_0027484
403 Ga0501067_0000541
404 Ga0501067_0006253
405 Ga0501067_0006918
406 Ga0501068_0000285
407 Ga0501068_0020848
408 Ga0501068_0102857
409 Ga0501069_0064739
410 Ga0501070_0000986
411 Ga0501070_0007138
412 Ga0501070_0056308
413 Ga0501070_0072982
414 Ga0501070_0076813
415 Ga0501070_0117326
416 Ga0501070_0182373
417 Ga0501070_0219000
418 Ga0501071_0001855
419 Ga0501071_0183018
420 Ga0501071_0197554
421 Ga0501072_0024316
422 Ga0501072_0065044
423 Ga0501072_0099443
424 Ga0501072_0102237
425 Ga0501072_0262246
426 Ga0501072_0297721
427 Ga0501073_0000082
428 Ga0501073_0025203
429 Ga0501073_0046729
430 Ga0501073_0131607
431 Ga0501074_0000325
432 Ga0501074_0025390
433 Ga0501074_0031897
434 Ga0501074_0034135
435 Ga0501074_0060211
436 Ga0501077_0047694
437 Ga0501079_0002217
438 Ga0501079_0034659
439 Ga0501080_0000138
440 Ga0501080_0000905
441 Ga0501080_0008422
442 Ga0501080_0020312
443 Ga0501080_0078805
444 Ga0501080_0187704
445 Ga0501081_0180883
446 Ga0501083_0000166
447 Ga0501083_0007344
448 Ga0501083_0046291
449 Ga0501035_0000047
450 Ga0501035_0000053
451 Ga0501035_0000146
452 Ga0501035_0011119
453 Ga0501035_0017735
454 Ga0501035_0035110
455 Ga0501035_0065933
456 Ga0501035_0103807
457 Ga0501035_0156720
458 Ga0501044_0000001
459 Ga0501044_0000054
460 Ga0501044_0000361
461 Ga0501044_0001585
462 Ga0501044_0001876
463 Ga0501044_0012163
464 Ga0501044_0036466
465 Ga0501044_0063811
466 Ga0501044_0074722
467 Ga0501044_0218298
468 Ga0501044_0252633
469 nmdc:mga03n38_12691_c1
470 nmdc:mga0yw44_54531_c1
471 nmdc:mga0k408_100437_c1
472 nmdc:mga06z11_156076_c1
473 nmdc:mga05p37_1056_c1
474 nmdc:mga09592_23355_c1
475 nmdc:mga0qj67_1466_c1
476 nmdc:mga0qj67_199816_c1
477 nmdc:mga06r32_149761_c1
478 nmdc:mga08y16_137241_c1
479 nmdc:mga08y16_9322_c1
480 nmdc:mga0n895_2352_c1
481 nmdc:mga0a205_108_c1
482 Ga0500646_0005161
483 Ga0500651_0003683
484 Ga0500566_0002784
485 Ga0500641_0029525
486 Ga0500594_0010317
487 Ga0500595_000002
488 Ga0500652_000062
489 Ga0500559_0000275
490 Ga0500568_0000190
491 Ga0500577_0000025
492 Ga0500604_0001541
493 Ga0500636_0023702
494 Ga0500636_0041978
495 Ga0500645_000012
496 Ga0500596_007001
497 Ga0501084_0101169
498 Ga0501084_0129866
499 Ga0501082_0000193
500 Ga0501082_0008034
501 Ga0501082_0018759
502 Ga0501082_0048825
503 Ga0530510_0081800
504 2643774812
505 2643793256
506 2643838647
507 2644132763
508 2739306611
509 2757570658
510 2857528402
511 2889794978
512 2889920095
513 2919075859
514 2996313174

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04860

Phage_portal

Phage portal protein

102

433

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6toa-assembly1.cif.gz_A neck of empty gta particle computed with c6 symmetry 0.763 37 387
6tba-assembly1.cif.gz_1A virion of native gene transfer agent (gta) particle 0.7564 37 387
6te8-assembly1.cif.gz_A neck of native gta particle computed with c12 symmetry 0.7559 40 387
6toa-assembly1.cif.gz_B neck of empty gta particle computed with c6 symmetry 0.7512 31 387
6toa-assembly1.cif.gz_B neck of empty gta particle computed with c6 symmetry 0.7266 31 387
ID Description Score Start End Superfamily
af_Q0D3C7_479_837_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6018 124 164 2.130.10.10
1fouG02 Mainly Beta;Beta Barrel;Upper collar protein gp10 (connector protein) fold;Upper collar protein gp10 (connector protein) 0.5746 106 176 2.40.500.10
3zjvA04 Mainly Beta;Single Sheet;Rubrerythrin, domain 2; 0.5441 115 165 2.20.28.290
4cqnD03 Mainly Beta;Single Sheet;Rubrerythrin, domain 2; 0.5434 116 162 2.20.28.290
af_Q54S11_447_565_3.40.20.10 Alpha Beta;3-Layer(aba) Sandwich;Severin;Severin 0.4873 114 163 3.40.20.10
ID Description Score Start End GO Terms
AF-A0A3C2EAH0-F1-model_v4 Phage portal protein 0.8907 35 163
AF-A0A7C9REH1-F1-model_v4 Phage portal protein 0.8723 42 198
AF-A0A832AS58-F1-model_v4 Phage portal protein 0.8358 269 391
AF-A0A5C9CZ14-F1-model_v4 deleted 0.8165 25 206
AF-A0A832AS58-F1-model_v4 Phage portal protein 0.8003 269 391

Map