F367257

General Info

Members Datasets Scaffolds Average Seq Length
257 148 514 469

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10328592|Ga0111539_103285922
Length 510
Sequence VARPQSRYVCQSCGEAFLRWEGQCRACGGWNSLVETVVREPTAGERARVRARTVTGTGGAEPTPLSQIGQAAVPRLPVGIDELDRVLGGGLVAGSLVLLGGEPGIGKSTLLLQAAAGIAEGSGTRTDDPGEGRVLYATGEESTGQVRLRAARLGLLTGLAGERIDVVAESTVERIVELARNRPPAVVVVDSIQTATVDELDGPAGSVGQVRESTLRLMELAKGEGIAVVLVGHVTKDGSIAGPKTLEHLVDAVLNLEGERYAALRVLRATKNRFGSTDEVGVFEMVEAGLREVDDPSRAFLVEHERAAPGSVVAPTLEGSRPLLVEVQALVAPSGYGTPARRGSGTDQNRLALLVAVLGRRAAIGLGSHDVYVNLAGGLAVDEPGLDLPLALALASSLRDVPVDPRTVAVGEVGLLGELRAVGGLERRLREAARLGFARAIVPRSGRSATSAPIEGLETVAVATLREAIDAALGSTSARRGESPSGDARLTARAEPIVGSGGRASRRGSD

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
60 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
63 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
66 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
93 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
101 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
144 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
146 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
148 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.67
Metatranscriptomes 1.95
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.39
Nodule 0
Rhizoplane 10.89
Rhizosphere 85.99
Stem 0
Stem Tuber 0
Unclassified 1.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10328592 3300009094 Bacteria 1780
2 JGI25406J46586_10019113 3300003203 Bacteria 2800
3 JGI25407J50210_10001472 3300003373 Bacteria 5350
4 Ga0070680_100001560 3300005336 Bacteria 16732
5 Ga0070691_10003127 3300005341 Bacteria 7412
6 Ga0070687_100029669 3300005343 Bacteria 2666
7 Ga0070705_100045271 3300005440 Bacteria 2531
8 Ga0070708_100006291 3300005445 Bacteria 9449
9 Ga0070708_100006776 3300005445 Bacteria 9126
10 Ga0070708_100010742 3300005445 Bacteria 7432
11 Ga0070708_100031364 3300005445 Bacteria 4599
12 Ga0070708_100076171 3300005445 Bacteria 3029
13 Ga0070708_100122007 3300005445 Bacteria 2405
14 Ga0070708_100141177 3300005445 Bacteria 2234
15 Ga0070708_100208885 3300005445 Bacteria 1829
16 Ga0070678_100011439 3300005456 Bacteria 5474
17 Ga0070662_100069332 3300005457 Bacteria 2594
18 Ga0070662_100109870 3300005457 Bacteria 2099
19 Ga0070706_100000048 3300005467 Bacteria 142843
20 Ga0070706_100001943 3300005467 Bacteria 21303
21 Ga0070706_100003584 3300005467 Bacteria 15235
22 Ga0070706_100006467 3300005467 Bacteria 11060
23 Ga0070706_100017023 3300005467 Bacteria 6714
24 Ga0070706_100103931 3300005467 Bacteria 2641
25 Ga0070707_100001141 3300005468 Bacteria 26133
26 Ga0070707_100004257 3300005468 Bacteria 13400
27 Ga0070707_100004824 3300005468 Bacteria 12634
28 Ga0070707_100007775 3300005468 Bacteria 9958
29 Ga0070707_100010835 3300005468 Bacteria 8490
30 Ga0070707_100029208 3300005468 Bacteria 5250
31 Ga0070707_100034598 3300005468 Bacteria 4819
32 Ga0070698_100010459 3300005471 Bacteria 9905
33 Ga0070698_100013123 3300005471 Bacteria 8767
34 Ga0070698_100017456 3300005471 Bacteria 7563
35 Ga0070698_100085596 3300005471 Bacteria 3139
36 Ga0070698_100150525 3300005471 Bacteria 2275
37 Ga0070699_100001552 3300005518 Bacteria 21014
38 Ga0070699_100003518 3300005518 Bacteria 13843
39 Ga0070699_100013009 3300005518 Bacteria 7169
40 Ga0070699_100023479 3300005518 Bacteria 5312
41 Ga0070699_100115811 3300005518 Bacteria 2355
42 Ga0070699_100159815 3300005518 Bacteria 1994
43 Ga0070679_100078653 3300005530 Bacteria 3286
44 Ga0070684_100115351 3300005535 Bacteria 2412
45 Ga0070697_100002578 3300005536 Bacteria 13940
46 Ga0070697_100003034 3300005536 Bacteria 12894
47 Ga0070697_100011692 3300005536 Bacteria 6864
48 Ga0070697_100015739 3300005536 Bacteria 5939
49 Ga0070697_100066790 3300005536 Bacteria 2940
50 Ga0070686_100006289 3300005544 Bacteria 6597
51 Ga0070695_100005165 3300005545 Bacteria 7700
52 Ga0070695_100039296 3300005545 Bacteria 2990
53 Ga0070696_100019222 3300005546 Bacteria 4625
54 Ga0070696_100022798 3300005546 Bacteria 4255
55 Ga0070696_100035669 3300005546 Bacteria 3425
56 Ga0070704_100005156 3300005549 Bacteria 7596
57 Ga0068857_100066191 3300005577 Bacteria 3214
58 Ga0068859_100050304 3300005617 Bacteria 4187
59 Ga0068864_100063568 3300005618 Bacteria 3198
60 Ga0068864_100069217 3300005618 Bacteria 3069
61 Ga0081538_10000001 3300005981 Bacteria 249890
62 Ga0081538_10001563 3300005981 Bacteria 23478
63 Ga0081539_10002087 3300005985 Bacteria 29854
64 Ga0070717_10003816 3300006028 Bacteria 10842
65 Ga0070717_10004268 3300006028 Bacteria 10303
66 Ga0075428_100000001 3300006844 Bacteria 772630
67 Ga0075428_100005288 3300006844 Bacteria 14346
68 Ga0075433_10180048 3300006852 Bacteria 1881
69 Ga0075434_100024140 3300006871 Bacteria 5941
70 Ga0075434_100097638 3300006871 Bacteria 2942
71 Ga0068865_100060098 3300006881 Bacteria 2660
72 Ga0097620_100050304 3300006931 Bacteria 4187
73 Ga0111539_10258147 3300009094 Bacteria 2029
74 Ga0105245_10016911 3300009098 Bacteria 6368
75 Ga0105245_10061430 3300009098 Bacteria 3387
76 Ga0114129_10073765 3300009147 Bacteria 4754
77 Ga0157375_10067734 3300013308 Bacteria 3568
78 Ga0157375_10068719 3300013308 Bacteria 3546
79 Ga0163163_10005876 3300014325 Bacteria 10674
80 Ga0163163_10061194 3300014325 Bacteria 3730
81 Ga0163163_10233949 3300014325 Bacteria 1887
82 Ga0163163_10249635 3300014325 Bacteria 1825
83 Ga0157379_10052038 3300014968 Bacteria 3657
84 Ga0157379_10129020 3300014968 Bacteria 2275
85 Ga0157379_10132831 3300014968 Bacteria 2241
86 Ga0197907_10942397 3300020069 Bacteria 3518
87 Ga0206356_10559493 3300020070 Bacteria 3811
88 Ga0206351_10894494 3300020077 Bacteria 3454
89 Ga0206352_10569880 3300020078 Bacteria 14788
90 Ga0224712_10026062 3300022467 Bacteria 2062
91 Ga0207688_10044568 3300025901 Bacteria 2472
92 Ga0207705_10007284 3300025909 Bacteria 8136
93 Ga0207684_10000121 3300025910 Bacteria 143066
94 Ga0207684_10002413 3300025910 Bacteria 18865
95 Ga0207684_10002895 3300025910 Bacteria 17010
96 Ga0207684_10003634 3300025910 Bacteria 14993
97 Ga0207684_10004747 3300025910 Bacteria 12738
98 Ga0207684_10008383 3300025910 Bacteria 9188
99 Ga0207684_10008423 3300025910 Bacteria 9171
100 Ga0207684_10068049 3300025910 Bacteria 3027
101 Ga0207684_10096042 3300025910 Bacteria 2529
102 Ga0207684_10113570 3300025910 Bacteria 2319
103 Ga0207660_10000002 3300025917 Bacteria 883566
104 Ga0207662_10007620 3300025918 Bacteria 5898
105 Ga0207652_10164574 3300025921 Bacteria 1989
106 Ga0207646_10001620 3300025922 Bacteria 27449
107 Ga0207646_10001995 3300025922 Bacteria 24534
108 Ga0207646_10005088 3300025922 Bacteria 13954
109 Ga0207646_10006869 3300025922 Bacteria 11688
110 Ga0207646_10016738 3300025922 Bacteria 6877
111 Ga0207646_10053765 3300025922 Bacteria 3602
112 Ga0207646_10074920 3300025922 Bacteria 3023
113 Ga0207687_10049827 3300025927 Bacteria 2913
114 Ga0207706_10086955 3300025933 Bacteria 2748
115 Ga0207706_10099657 3300025933 Bacteria 2556
116 Ga0207668_10082162 3300025972 Bacteria 2340
117 Ga0207703_10045289 3300026035 Bacteria 3538
118 Ga0207674_10048029 3300026116 Bacteria 4372
119 Ga0207683_10010335 3300026121 Bacteria 7960
120 Ga0209983_1000537 3300027665 Bacteria 8176
121 Ga0209971_1003378 3300027682 Bacteria 3790
122 Ga0209966_1002017 3300027695 Bacteria 3396
123 Ga0265326_10004210 3300028558 Bacteria 4632
124 Ga0265319_1003522 3300028563 Bacteria 8129
125 Ga0265318_10008177 3300028577 Bacteria 4675
126 Ga0265318_10015823 3300028577 Bacteria 3127
127 Ga0265318_10019150 3300028577 Bacteria 2780
128 Ga0265323_10010875 3300028653 Bacteria 3685
129 Ga0265336_10003749 3300028666 Bacteria 5880
130 Ga0265336_10013879 3300028666 Bacteria 2680
131 Ga0265338_10066054 3300028800 Bacteria 3133
132 Ga0265324_10004257 3300029957 Bacteria 6538
133 Ga0265330_10017390 3300031235 Bacteria 3312
134 Ga0265330_10057729 3300031235 Bacteria 1692
135 Ga0265325_10031997 3300031241 Bacteria 2812
136 Ga0265325_10032005 3300031241 Bacteria 2811
137 Ga0265329_10010875 3300031242 Bacteria 3327
138 Ga0265340_10003159 3300031247 Bacteria 9338
139 Ga0265340_10013214 3300031247 Bacteria 4345
140 Ga0265340_10028874 3300031247 Bacteria 2788
141 Ga0265339_10045341 3300031249 Bacteria 2420
142 Ga0265316_10002562 3300031344 Bacteria 18784
143 Ga0265316_10013878 3300031344 Bacteria 7129
144 Ga0265316_10024240 3300031344 Bacteria 5090
145 Ga0265316_10024960 3300031344 Bacteria 4996
146 Ga0307508_10154179 3300031616 Bacteria 1901
147 Ga0316575_10000052 3300031665 Bacteria 29286
148 Ga0265314_10039598 3300031711 Bacteria 3392
149 Ga0265342_10032799 3300031712 Bacteria 3200
150 Ga0316576_10028898 3300031727 Bacteria 3913
151 Ga0316576_10029074 3300031727 Bacteria 3902
152 Ga0316577_10001919 3300031733 Bacteria 10066
153 Ga0316577_10003257 3300031733 Bacteria 8173
154 Ga0307409_100024822 3300031995 Bacteria 4190
155 Ga0373956_0001030 3300035119 Bacteria 11506
156 Ga0316574_0113909 3300035398 Bacteria 1734
157 Ga0373927_0000256 3300035695 Bacteria 41861
158 Ga0373947_0055059 3300035725 Bacteria 2402
159 Ga0316584_0000140 3300036712 Bacteria 32198
160 Ga0316584_0026494 3300036712 Bacteria 4262
161 Ga0316584_0106886 3300036712 Bacteria 2094
162 Ga0395905_0023922 3300037471 Bacteria 5767
163 Ga0436364_0047243 3300037853 Viruses 1532
164 Ga0436364_0961053 3300037853 Unclassified 2435
165 Ga0436365_0127636 3300039437 Bacteria 3547
166 Ga0436365_0776276 3300039437 Bacteria 4290
167 Ga0436363_1614876 3300039450 Bacteria 14872
168 Ga0451577_0112402 3300042876 Bacteria 2438
169 Ga0466969_0005895 3300044656 Bacteria 6514
170 Ga0466972_0009597 3300044658 Unclassified 4856
171 Ga0466961_0003304 3300044693 Bacteria 10052
172 Ga0466961_0050918 3300044693 Bacteria 2645
173 Ga0466964_0000504 3300044706 Bacteria 12150
174 Ga0466970_0004195 3300044765 Bacteria 7090
175 Ga0466959_0110349 3300045049 Unclassified 1963
176 Ga0451576_0153570 3300045051 Bacteria 2401
177 Ga0451576_0303175 3300045051 Bacteria 1671
178 Ga0466967_0132533 3300045976 Unclassified 2315
179 Ga0495603_0033335 3300046455 Bacteria 3099
180 Ga0495651_0124514 3300046462 Bacteria 1889
181 Ga0495653_0047239 3300046463 Bacteria 3331
182 Ga0495618_0013482 3300046514 Bacteria 4972
183 Ga0495640_0039653 3300046533 Bacteria 3303
184 Ga0495635_0084337 3300046663 Bacteria 2174
185 Ga0495599_0087503 3300046678 Bacteria 1945
186 Ga0495669_0001294 3300046684 Bacteria 10367
187 Ga0495674_0029730 3300047319 Bacteria 4972
188 Ga0495674_0047488 3300047319 Bacteria 3807
189 Ga0495680_0009495 3300047322 Bacteria 8743
190 Ga0496102_0006967 3300048905 Bacteria 9646
191 Ga0496102_0128129 3300048905 Bacteria 2374
192 Ga0496103_0007485 3300048906 Bacteria 6506
193 Ga0496104_0014972 3300048907 Bacteria 7015
194 Ga0496104_0030178 3300048907 Bacteria 5036
195 Ga0496104_0033082 3300048907 Bacteria 4813
196 Ga0496104_0035568 3300048907 Bacteria 4650
197 Ga0496104_0038036 3300048907 Bacteria 4500
198 Ga0496105_0015904 3300048908 Bacteria 6001
199 Ga0496105_0073879 3300048908 Bacteria 2817
200 Ga0496105_0074954 3300048908 Bacteria 2795
201 Ga0496107_0046137 3300048910 Bacteria 3136
202 Ga0496108_0005641 3300048911 Bacteria 10133
203 Ga0496108_0006257 3300048911 Bacteria 9644
204 Ga0496108_0041657 3300048911 Bacteria 3834
205 Ga0496109_0006042 3300048912 Bacteria 10174
206 Ga0496109_0040903 3300048912 Bacteria 4199
207 Ga0496109_0092749 3300048912 Bacteria 2793
208 Ga0496109_0259688 3300048912 Bacteria 1636
209 Ga0496110_0077770 3300048913 Bacteria 2952
210 Ga0496110_0088217 3300048913 Bacteria 2770
211 Ga0496111_0005194 3300048914 Bacteria 8303
212 Ga0496111_0026866 3300048914 Bacteria 4067
213 Ga0496112_0001569 3300048915 Bacteria 17653
214 Ga0496112_0025403 3300048915 Bacteria 5687
215 Ga0496112_0033755 3300048915 Bacteria 4975
216 Ga0496113_0131691 3300048916 Bacteria 1963
217 Ga0496113_0158856 3300048916 Bacteria 1786
218 Ga0501033_0033349 3300049570 Bacteria 3866
219 Ga0501034_0012969 3300049571 Bacteria 8591
220 Ga0501034_0054103 3300049571 Bacteria 4041
221 Ga0501037_0005232 3300049573 Bacteria 9436
222 Ga0501037_0113894 3300049573 Bacteria 1947
223 Ga0501038_0115439 3300049574 Bacteria 2219
224 Ga0501041_0004600 3300049577 Bacteria 8005
225 Ga0501041_0018433 3300049577 Bacteria 4159
226 Ga0501047_0019127 3300049581 Bacteria 6571
227 Ga0501048_0021723 3300049582 Bacteria 4696
228 Ga0501068_0012481 3300049584 Bacteria 4820
229 Ga0501068_0095068 3300049584 Bacteria 1842
230 Ga0501070_0014581 3300049586 Bacteria 6616
231 Ga0501071_0043096 3300049587 Bacteria 3234
232 Ga0501071_0101725 3300049587 Bacteria 2118
233 Ga0501072_0063544 3300049588 Bacteria 2912
234 Ga0501076_0037770 3300049592 Bacteria 3789
235 Ga0501079_0043298 3300049741 Bacteria 3475
236 Ga0501081_0050485 3300049743 Bacteria 2866
237 Ga0501081_0062052 3300049743 Bacteria 2592
238 Ga0501044_0055822 3300049823 Bacteria 4055
239 Ga0501045_0021491 3300049824 Bacteria 4616
240 nmdc:mga0qj67_138709_c1 3300050509 Bacteria 1971
241 nmdc:mga08y16_161490_c1 3300050511 Bacteria 2328
242 nmdc:mga08y16_209586_c1 3300050511 Bacteria 2018
243 nmdc:mga0n895_171927_c1 3300050512 Bacteria 2199
244 nmdc:mga0a205_138271_c1 3300050515 Bacteria 2336
245 nmdc:mga0a205_276326_c1 3300050515 Bacteria 1556
246 Ga0495601_0006825 3300053077 Bacteria 6686
247 Ga0495601_0065229 3300053077 Bacteria 2317
248 Ga0495612_0000305 3300053078 Bacteria 19931
249 Ga0495619_0069872 3300053085 Bacteria 2348
250 Ga0500616_0002125 3300053153 Bacteria 17201
251 Ga0501084_0080850 3300054114 Bacteria 2725
252 Ga0590071_005515 3300059421 Bacteria 3039
253 Ga0590075_001949 3300059424 Bacteria 4993
254 Ga0590077_008289 3300059426 Bacteria 2128
255 Ga0501082_0022198 3300060353 Bacteria 5470
256 Ga0530510_0015127 3300061734 Bacteria 5449
257 2837184556 2837183177 Bacteria 4637169
258 Ga0111539_10328592
259 JGI25406J46586_10019113
260 JGI25407J50210_10001472
261 Ga0070680_100001560
262 Ga0070691_10003127
263 Ga0070687_100029669
264 Ga0070705_100045271
265 Ga0070708_100006291
266 Ga0070708_100006776
267 Ga0070708_100010742
268 Ga0070708_100031364
269 Ga0070708_100076171
270 Ga0070708_100122007
271 Ga0070708_100141177
272 Ga0070708_100208885
273 Ga0070678_100011439
274 Ga0070662_100069332
275 Ga0070662_100109870
276 Ga0070706_100000048
277 Ga0070706_100001943
278 Ga0070706_100003584
279 Ga0070706_100006467
280 Ga0070706_100017023
281 Ga0070706_100103931
282 Ga0070707_100001141
283 Ga0070707_100004257
284 Ga0070707_100004824
285 Ga0070707_100007775
286 Ga0070707_100010835
287 Ga0070707_100029208
288 Ga0070707_100034598
289 Ga0070698_100010459
290 Ga0070698_100013123
291 Ga0070698_100017456
292 Ga0070698_100085596
293 Ga0070698_100150525
294 Ga0070699_100001552
295 Ga0070699_100003518
296 Ga0070699_100013009
297 Ga0070699_100023479
298 Ga0070699_100115811
299 Ga0070699_100159815
300 Ga0070679_100078653
301 Ga0070684_100115351
302 Ga0070697_100002578
303 Ga0070697_100003034
304 Ga0070697_100011692
305 Ga0070697_100015739
306 Ga0070697_100066790
307 Ga0070686_100006289
308 Ga0070695_100005165
309 Ga0070695_100039296
310 Ga0070696_100019222
311 Ga0070696_100022798
312 Ga0070696_100035669
313 Ga0070704_100005156
314 Ga0068857_100066191
315 Ga0068859_100050304
316 Ga0068864_100063568
317 Ga0068864_100069217
318 Ga0081538_10000001
319 Ga0081538_10001563
320 Ga0081539_10002087
321 Ga0070717_10003816
322 Ga0070717_10004268
323 Ga0075428_100000001
324 Ga0075428_100005288
325 Ga0075433_10180048
326 Ga0075434_100024140
327 Ga0075434_100097638
328 Ga0068865_100060098
329 Ga0097620_100050304
330 Ga0111539_10258147
331 Ga0105245_10016911
332 Ga0105245_10061430
333 Ga0114129_10073765
334 Ga0157375_10067734
335 Ga0157375_10068719
336 Ga0163163_10005876
337 Ga0163163_10061194
338 Ga0163163_10233949
339 Ga0163163_10249635
340 Ga0157379_10052038
341 Ga0157379_10129020
342 Ga0157379_10132831
343 Ga0197907_10942397
344 Ga0206356_10559493
345 Ga0206351_10894494
346 Ga0206352_10569880
347 Ga0224712_10026062
348 Ga0207688_10044568
349 Ga0207705_10007284
350 Ga0207684_10000121
351 Ga0207684_10002413
352 Ga0207684_10002895
353 Ga0207684_10003634
354 Ga0207684_10004747
355 Ga0207684_10008383
356 Ga0207684_10008423
357 Ga0207684_10068049
358 Ga0207684_10096042
359 Ga0207684_10113570
360 Ga0207660_10000002
361 Ga0207662_10007620
362 Ga0207652_10164574
363 Ga0207646_10001620
364 Ga0207646_10001995
365 Ga0207646_10005088
366 Ga0207646_10006869
367 Ga0207646_10016738
368 Ga0207646_10053765
369 Ga0207646_10074920
370 Ga0207687_10049827
371 Ga0207706_10086955
372 Ga0207706_10099657
373 Ga0207668_10082162
374 Ga0207703_10045289
375 Ga0207674_10048029
376 Ga0207683_10010335
377 Ga0209983_1000537
378 Ga0209971_1003378
379 Ga0209966_1002017
380 Ga0265326_10004210
381 Ga0265319_1003522
382 Ga0265318_10008177
383 Ga0265318_10015823
384 Ga0265318_10019150
385 Ga0265323_10010875
386 Ga0265336_10003749
387 Ga0265336_10013879
388 Ga0265338_10066054
389 Ga0265324_10004257
390 Ga0265330_10017390
391 Ga0265330_10057729
392 Ga0265325_10031997
393 Ga0265325_10032005
394 Ga0265329_10010875
395 Ga0265340_10003159
396 Ga0265340_10013214
397 Ga0265340_10028874
398 Ga0265339_10045341
399 Ga0265316_10002562
400 Ga0265316_10013878
401 Ga0265316_10024240
402 Ga0265316_10024960
403 Ga0307508_10154179
404 Ga0316575_10000052
405 Ga0265314_10039598
406 Ga0265342_10032799
407 Ga0316576_10028898
408 Ga0316576_10029074
409 Ga0316577_10001919
410 Ga0316577_10003257
411 Ga0307409_100024822
412 Ga0373956_0001030
413 Ga0316574_0113909
414 Ga0373927_0000256
415 Ga0373947_0055059
416 Ga0316584_0000140
417 Ga0316584_0026494
418 Ga0316584_0106886
419 Ga0395905_0023922
420 Ga0436364_0047243
421 Ga0436364_0961053
422 Ga0436365_0127636
423 Ga0436365_0776276
424 Ga0436363_1614876
425 Ga0451577_0112402
426 Ga0466969_0005895
427 Ga0466972_0009597
428 Ga0466961_0003304
429 Ga0466961_0050918
430 Ga0466964_0000504
431 Ga0466970_0004195
432 Ga0466959_0110349
433 Ga0451576_0153570
434 Ga0451576_0303175
435 Ga0466967_0132533
436 Ga0495603_0033335
437 Ga0495651_0124514
438 Ga0495653_0047239
439 Ga0495618_0013482
440 Ga0495640_0039653
441 Ga0495635_0084337
442 Ga0495599_0087503
443 Ga0495669_0001294
444 Ga0495674_0029730
445 Ga0495674_0047488
446 Ga0495680_0009495
447 Ga0496102_0006967
448 Ga0496102_0128129
449 Ga0496103_0007485
450 Ga0496104_0014972
451 Ga0496104_0030178
452 Ga0496104_0033082
453 Ga0496104_0035568
454 Ga0496104_0038036
455 Ga0496105_0015904
456 Ga0496105_0073879
457 Ga0496105_0074954
458 Ga0496107_0046137
459 Ga0496108_0005641
460 Ga0496108_0006257
461 Ga0496108_0041657
462 Ga0496109_0006042
463 Ga0496109_0040903
464 Ga0496109_0092749
465 Ga0496109_0259688
466 Ga0496110_0077770
467 Ga0496110_0088217
468 Ga0496111_0005194
469 Ga0496111_0026866
470 Ga0496112_0001569
471 Ga0496112_0025403
472 Ga0496112_0033755
473 Ga0496113_0131691
474 Ga0496113_0158856
475 Ga0501033_0033349
476 Ga0501034_0012969
477 Ga0501034_0054103
478 Ga0501037_0005232
479 Ga0501037_0113894
480 Ga0501038_0115439
481 Ga0501041_0004600
482 Ga0501041_0018433
483 Ga0501047_0019127
484 Ga0501048_0021723
485 Ga0501068_0012481
486 Ga0501068_0095068
487 Ga0501070_0014581
488 Ga0501071_0043096
489 Ga0501071_0101725
490 Ga0501072_0063544
491 Ga0501076_0037770
492 Ga0501079_0043298
493 Ga0501081_0050485
494 Ga0501081_0062052
495 Ga0501044_0055822
496 Ga0501045_0021491
497 nmdc:mga0qj67_138709_c1
498 nmdc:mga08y16_161490_c1
499 nmdc:mga08y16_209586_c1
500 nmdc:mga0n895_171927_c1
501 nmdc:mga0a205_138271_c1
502 nmdc:mga0a205_276326_c1
503 Ga0495601_0006825
504 Ga0495601_0065229
505 Ga0495612_0000305
506 Ga0495619_0069872
507 Ga0500616_0002125
508 Ga0501084_0080850
509 Ga0590071_005515
510 Ga0590075_001949
511 Ga0590077_008289
512 Ga0501082_0022198
513 Ga0530510_0015127
514 2837184556

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18073

Rubredoxin_2

Rubredoxin metal binding domain

8

35

0.99

PF13541

ChlI

Subunit ChlI of Mg-chelatase

356

446

0.94

PF05362

Lon_C

Lon protease (S16) C-terminal proteolytic domain

365

475

0.79

PF13481

AAA_25

AAA domain

62

239

0.78

PF06745

ATPase

KaiC

76

291

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lkq-assembly1.cif.gz_B protease domain of rada 0.9397 272 447
5lkq-assembly1.cif.gz_B protease domain of rada 0.9294 272 447
5h45-assembly1.cif.gz_B crystal structure of the c-terminal lon protease-like domain of thermus thermophilus rada/sms 0.9187 278 447
5h45-assembly1.cif.gz_B crystal structure of the c-terminal lon protease-like domain of thermus thermophilus rada/sms 0.9019 278 447
8dvh-assembly1.cif.gz_B crystal structure of atp-dependent lon protease from bacillus subtillis (bslonba) 0.8886 281 447
ID Description Score Start End Superfamily
af_P9WHJ9_288_461_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9768 281 445 3.30.230.10
af_P9WHJ9_62_274_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9697 64 271 3.40.50.300
af_P24554_64_278_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9508 61 275 3.40.50.300
af_Q76B91_451_618_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9496 283 446 3.30.230.10
af_F4K8X8_240_443_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9467 79 275 3.40.50.300
ID Description Score Start End GO Terms
AF-T1A795-F1-model_v4 DNA repair protein RadA 0.9916 298 390 GO:0000725
GO:0005829
AF-W1XIA3-F1-model_v4 DNA repair protein RadA 0.9875 288 396 GO:0000725
GO:0005829
AF-T1A795-F1-model_v4 DNA repair protein RadA 0.9811 298 390 GO:0000725
GO:0005829
AF-K1S9P6-F1-model_v4 DNA repair protein RadA 0.9782 310 419 GO:0000725
GO:0005829
AF-A0A661AF02-F1-model_v4 DNA repair protein RadA 0.9772 281 447 GO:0000725
GO:0004176
GO:0004252
GO:0005829
GO:0006508

Map